NO09G03000, NO09G03000 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G03000 vs. NCBI_GenBank
Match: EWM27501.1 (Putative thiol-disulfide oxidoreductase DCC [Nannochloropsis gaditana]) HSP 1 Score: 300.8 bits (769), Expect = 3.800e-78 Identity = 165/248 (66.53%), Postives = 194/248 (78.23%), Query Frame = 0 Query: 2 MSRVLLQGILALSS--TATAFVTPAARQIGSSAAAALAETSRSRTGSSSNSFISTPFWGGALALSSSSCLMSRSLSTLKSSAMADSTT----NSDMKPWKINLLYDGKCSLCMKEVSFLQKRDMENVILFTDLNDPNFKPEENGGVDYEAGMKYIHAVLPNGEVVKGVEVFRRIYEVIGLGWVYAATKLPLIGSAADWAYDQWAIRRLQITGRPDLEVILRERQEAAAAKKDADCEDKGECEIDWDKI 244 M+R LL+GI ALSS +A +FV P R G A A S +R S +S+P+ S + SRSLS+LK++++ +TT +SD+KPWKINLLYDGKCSLCMKEV+FLQKRD++ ILFTDLNDPNFK EENGGVDYEAGMKYIHAVLP+GEVVKGVEVFRR+YEVIGLGWVYAATK+P IG+AADWAYDQWAIRRLQITGRPDLEVIL++RQE KKD C+D+GECEIDWDK+ Sbjct: 1 MARGLLRGIWALSSATSAASFVVPVFRHAGGVARGAPLSRSMAR---GIGSGLSSPW-------DVVSAIPSRSLSSLKATSVGSTTTSTAPDSDVKPWKINLLYDGKCSLCMKEVTFLQKRDVDGNILFTDLNDPNFKAEENGGVDYEAGMKYIHAVLPDGEVVKGVEVFRRVYEVIGLGWVYAATKIPFIGAAADWAYDQWAIRRLQITGRPDLEVILKQRQE-ELKKKDFSCDDEGECEIDWDKL 237
BLAST of NO09G03000 vs. NCBI_GenBank
Match: CEM39536.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 175.6 bits (444), Expect = 1.800e-40 Identity = 97/193 (50.26%), Postives = 125/193 (64.77%), Query Frame = 0 Query: 48 SNSFISTPFWGGALALSSSSCLMSRSLSTLKSSAMADSTTNSDMKPWKINLLYDGKCSLCMKEVSFLQKRDMENVILFTDLNDPNFKPEENGGVDYEAGMKYIHAVLPNGEVVKGVEVFRRIYEVIGLGWVYAATKLPLIGSAADWAYDQWAIRRLQITGRPDLEVILRERQEAAAAKK--DADCEDKGECEI 239 S SF P GG L S++ ++R+ + +A + T W+I+LLYDG+C LC+KE+ FL+KRD E I FTDL P +K EE+G VD+E GM+ IHAV +G+V+ GVEVFRR+YE IGLGWVYAATKLP+IG A D AYD WA RL++TGRPDL ++ ER K CED EC + Sbjct: 22 SRSF-QLPASGGRLTSSNAFQRLTRARMMSQRAAQSPPT-------WQIDLLYDGECPLCLKEIDFLKKRDTEGKIQFTDLASPGYKQEEHGNVDFERGMRSIHAVTSSGDVISGVEVFRRVYEAIGLGWVYAATKLPVIGPAVDVAYDIWASNRLRLTGRPDLAKVMEERAAKLRDKSAYPQGCED--ECAV 204
BLAST of NO09G03000 vs. NCBI_GenBank
Match: WP_027844633.1 (DUF393 domain-containing protein [Mastigocoleus testarum] >KST64327.1 thiol-disulfide oxidoreductase [Mastigocoleus testarum BC008] >KST64380.1 thiol-disulfide oxidoreductase [Mastigocoleus testarum BC008]) HSP 1 Score: 173.7 bits (439), Expect = 7.000e-40 Identity = 80/146 (54.79%), Postives = 105/146 (71.92%), Query Frame = 0 Query: 83 ADSTTNSDMKPWKINLLYDGKCSLCMKEVSFLQKRDM-ENVILFTDLNDPNFKPEENGGVDYEAGMKYIHAVLPNGEVVKGVEVFRRIYEVIGLGWVYAATKLPLIGSAADWAYDQWAIRRLQITGRPDLEVILRERQEAAAAKKD 228 +D N W+I LLYDG+C LC++EV+FLQKRD N++ F D+ D ++ PEENGGVD+EA M IH VLP+G V+K VEVFRR+YE +G+GWVYA TKLP+IG+ A+ Y WA RL +TGRP+LE I+R+RQ+ D Sbjct: 11 SDQNLNQSSPSWEIKLLYDGQCPLCVREVNFLQKRDAGRNLVAFVDIADDDYNPEENGGVDFEAAMGRIHGVLPDGTVIKNVEVFRRVYEALGMGWVYAITKLPIIGAIANLIYGIWAEWRLALTGRPNLETIIRKRQQRIECSTD 156
BLAST of NO09G03000 vs. NCBI_GenBank
Match: WP_099703068.1 (DUF393 domain-containing protein [Chroococcales cyanobacterium IPPAS B-1203] >PIG91406.1 thiol-disulfide oxidoreductase [Chroococcales cyanobacterium IPPAS B-1203]) HSP 1 Score: 173.3 bits (438), Expect = 9.100e-40 Identity = 83/167 (49.70%), Postives = 116/167 (69.46%), Query Frame = 0 Query: 73 SLSTLKSSAMADSTTNSDMKPWKINLLYDGKCSLCMKEVSFLQKRD-MENVILFTDLNDPNFKPEENGGVDYEAGMKYIHAVLPNGEVVKGVEVFRRIYEVIGLGWVYAATKLPLIGSAADWAYDQWAIRRLQITGRPDLEVILRERQEAAAAKKDADCEDKGECEI 239 S S ++S + + SD WKI LLYDG+C LC++EV+FL+K+D ++ F D+ D N+ PE +GGVD+E M IHAV+P+G+V++ VEVFRR+YE +G+GWVYA TKLP+IG+ AD Y WA RL++TGRPDL I+ ERQ K +C+ +G C+I Sbjct: 2 SASNIQSRELTANQQVSDSTSWKIKLLYDGECPLCLREVNFLRKQDASRGLVAFVDIADENYTPEAHGGVDFETAMGRIHAVMPDGKVIQNVEVFRRVYETLGMGWVYAITKLPVIGAFADMLYGIWADWRLRLTGRPDLAAIVAERQ------KQLECKTQGRCQI 162
BLAST of NO09G03000 vs. NCBI_GenBank
Match: WP_096383278.1 (DUF393 domain-containing protein [Stanieria sp. NIES-3757] >BAU64254.1 putative thiol-disulphide oxidoreductase DCC [Stanieria sp. NIES-3757]) HSP 1 Score: 172.9 bits (437), Expect = 1.200e-39 Identity = 76/128 (59.38%), Postives = 99/128 (77.34%), Query Frame = 0 Query: 94 WKINLLYDGKCSLCMKEVSFLQKRDM-ENVILFTDLNDPNFKPEENGGVDYEAGMKYIHAVLPNGEVVKGVEVFRRIYEVIGLGWVYAATKLPLIGSAADWAYDQWAIRRLQITGRPDLEVILRERQE 221 WKI LLYDG+C LC++EV+FLQ+RD ++ F D+ D ++ P ENGG+DYE M IHAVLPNG V+K VEVFRR+YE +G+GW+YA TKLP+IGS ADW Y WA RL++TGRPDL I+ +R++ Sbjct: 18 WKIKLLYDGECPLCLREVNFLQQRDAGRGIVAFVDIADRDYTPAENGGIDYETAMGRIHAVLPNGTVIKNVEVFRRVYEALGMGWLYAITKLPVIGSVADWLYGIWANWRLKLTGRPDLATIVAQREQ 145
BLAST of NO09G03000 vs. NCBI_GenBank
Match: WP_073619994.1 (DUF393 domain-containing protein [Calothrix sp. HK-06] >OKH51360.1 thiol-disulfide oxidoreductase [Calothrix sp. HK-06]) HSP 1 Score: 172.2 bits (435), Expect = 2.000e-39 Identity = 85/156 (54.49%), Postives = 112/156 (71.79%), Query Frame = 0 Query: 85 STTNSDMKPWKINLLYDGKCSLCMKEVSFLQKRDM-ENVILFTDLNDPNFKPEENGGVDYEAGMKYIHAVLPNGEVVKGVEVFRRIYEVIGLGWVYAATKLPLIGSAADWAYDQWAIRRLQITGRPDLEVILRERQEAAAAKKDADCEDKGECEID 240 ST SD WKI LLYDG+C LC++EV+FL+KRD ++ F D+ D N+ P+ NGG+D+E M IHAVLP+G +VK VEVFRRIYE++G+GWVYA TKLP+IG+ AD+ Y WA RL +TGRP+L ++RERQE A+C ++ C ID Sbjct: 5 STKTSD---WKIKLLYDGECPLCVREVNFLKKRDAGRGLVAFVDIADKNYNPDANGGIDFETAMGRIHAVLPDGTLVKNVEVFRRIYEILGMGWVYAVTKLPVIGAIADFIYGIWADWRLALTGRPNLATVVRERQER------AECTER--CRID 149
BLAST of NO09G03000 vs. NCBI_GenBank
Match: WP_015225508.1 (DUF393 domain-containing protein [Halothece sp. PCC 7418] >AFZ43632.1 thiol-disulfide oxidoreductase DCC [Halothece sp. PCC 7418]) HSP 1 Score: 171.4 bits (433), Expect = 3.500e-39 Identity = 75/126 (59.52%), Postives = 98/126 (77.78%), Query Frame = 0 Query: 94 WKINLLYDGKCSLCMKEVSFLQKRDM-ENVILFTDLNDPNFKPEENGGVDYEAGMKYIHAVLPNGEVVKGVEVFRRIYEVIGLGWVYAATKLPLIGSAADWAYDQWAIRRLQITGRPDLEVILRER 219 W+I LLYDG+C LC++EV+FLQKRD ++ F D+ D N++PE NGGVD+E M IH VLP+G VVK VEVFRR+YE +G+GWVYA TKLP++G+ ADW Y WA RRL +TGRPDL+ I+ ++ Sbjct: 9 WQIKLLYDGECPLCLREVNFLQKRDAGRGLVKFIDIADDNYQPEANGGVDFETAMGRIHGVLPDGTVVKDVEVFRRVYEALGMGWVYAITKLPVVGAIADWVYGLWADRRLALTGRPDLKTIMEQK 134
BLAST of NO09G03000 vs. NCBI_GenBank
Match: WP_086690854.1 (DUF393 domain-containing protein [Nostoc sp. T09] >OUL21699.1 thiol-disulfide oxidoreductase [Nostoc sp. T09]) HSP 1 Score: 171.0 bits (432), Expect = 4.500e-39 Identity = 90/171 (52.63%), Postives = 113/171 (66.08%), Query Frame = 0 Query: 70 MSRSLSTLKSSAMADSTTNSDMKPWKINLLYDGKCSLCMKEVSFLQKRDM-ENVILFTDLNDPNFKPEENGGVDYEAGMKYIHAVLPNGEVVKGVEVFRRIYEVIGLGWVYAATKLPLIGSAADWAYDQWAIRRLQITGRPDLEVILRERQEAAAAKKDADCEDKGECEID 240 MS S S SS + S WKI LLYD +C LCM+EV+FLQKRD ++ F D+ D ++ PE +GGVD+E M IHAVLPNG VV+ VEVFRR+YE++G+GWVYA T+LP+IG+ AD+ Y WA RL ITGRP LE I+ +RQE A C +G C ID Sbjct: 1 MSLSNSQSYSSDKVLTPPVSTAPVWKIELLYDSECPLCMREVNFLQKRDAGRGLVKFVDIADDDYNPEAHGGVDFETAMGRIHAVLPNGTVVQNVEVFRRVYEILGMGWVYAITQLPIIGAIADFLYGVWAKWRLAITGRPKLEDIVAQRQERLA------CNTEGRCRID 165
BLAST of NO09G03000 vs. NCBI_GenBank
Match: WP_104549077.1 (DUF393 domain-containing protein [Chroococcidiopsis sp. TS-821] >PPS38987.1 thiol-disulfide oxidoreductase [Chroococcidiopsis sp. TS-821]) HSP 1 Score: 171.0 bits (432), Expect = 4.500e-39 Identity = 83/171 (48.54%), Postives = 118/171 (69.01%), Query Frame = 0 Query: 69 LMSRSLSTLKSSAMADSTTNSDMKPWKINLLYDGKCSLCMKEVSFLQKRDM-ENVILFTDLNDPNFKPEENGGVDYEAGMKYIHAVLPNGEVVKGVEVFRRIYEVIGLGWVYAATKLPLIGSAADWAYDQWAIRRLQITGRPDLEVILRERQEAAAAKKDADCEDKGECEI 239 + + ++ + +S+A S S WKI LLYDG+C LC++EV+FL+KRD ++ F D+ D N+ P+ +GGVD+E M IHAVLP+G V+K VEVFRR+YE +G+GW+YA TKLP+IG+ AD Y WA RL++TGRPDL I+ +RQ K A+C+ +G C+I Sbjct: 1 MSASNIQSRESTAQQVSKATS----WKIKLLYDGECPLCLREVNFLRKRDAGRGLVAFVDIADENYNPKAHGGVDFETAMGRIHAVLPDGTVIKNVEVFRRVYETLGMGWIYAITKLPVIGAVADMLYGIWADWRLRLTGRPDLATIIADRQ------KQAECKTQGRCQI 161
BLAST of NO09G03000 vs. NCBI_GenBank
Match: WP_096597784.1 (DUF393 domain-containing protein [Calothrix sp. NIES-2100] >BAY20889.1 hypothetical protein NIES2100_06330 [Calothrix sp. NIES-2100]) HSP 1 Score: 170.2 bits (430), Expect = 7.700e-39 Identity = 84/167 (50.30%), Postives = 113/167 (67.66%), Query Frame = 0 Query: 74 LSTLKSSAMADSTTNSDMKPWKINLLYDGKCSLCMKEVSFLQKRDM-ENVILFTDLNDPNFKPEENGGVDYEAGMKYIHAVLPNGEVVKGVEVFRRIYEVIGLGWVYAATKLPLIGSAADWAYDQWAIRRLQITGRPDLEVILRERQEAAAAKKDADCEDKGECEID 240 +S++ S + S S WKI LLYDG+C LCM+EV+FLQKRD ++ F D+ D ++ PEE+GGVD+E M IHAVL +G VV+ VEVFRR+Y ++G+GWVY+ TKLP++G+ AD+ Y WA RL ITGRP LE +++ERQE C +G C ID Sbjct: 1 MSSISSEILTQSA--STAPAWKIELLYDGECPLCMREVNFLQKRDAGRGLVHFVDIADDDYNPEEHGGVDFETAMGRIHAVLADGTVVQNVEVFRRVYAILGMGWVYSVTKLPIVGAIADFLYGIWAKWRLAITGRPTLETVVQERQERL-------CNTQGRCRID 158 The following BLAST results are available for this feature:
BLAST of NO09G03000 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G03000 ID=NO09G03000|Name=NO09G03000|organism=Nannochloropsis oceanica|type=gene|length=1832bpback to top protein sequence of NO09G03000.1 >NO09G03000.1-protein ID=NO09G03000.1-protein|Name=NO09G03000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=244bpback to top Synonyms
Publications
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