NO09G02240, NO09G02240 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G02240 vs. NCBI_GenBank
Match: EWM27599.1 (Ribosomal protein L18e/L15P [Nannochloropsis gaditana]) HSP 1 Score: 368.6 bits (945), Expect = 1.200e-98 Identity = 186/191 (97.38%), Postives = 190/191 (99.48%), Query Frame = 0 Query: 1 MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSSFNAVVLKRLFMSKTNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHDREALSHFGHRSTVGNVHTHDNVKPYTRAKGRKFEKARGRRRSTGFKI 192 MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDS+FNAV+LKRLFMSK NRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHDREALSHFGHRSTVGNVHTHDNVKPYTR+KGRKFEKARGRRRSTGFK+ Sbjct: 1 MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSNFNAVILKRLFMSKNNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHDREALSHFGHRSTVGNVHTHDNVKPYTRSKGRKFEKARGRRRSTGFKV 191
BLAST of NO09G02240 vs. NCBI_GenBank
Match: CBJ25909.1 (cytoplasmic ribosomal protein L18 [Ectocarpus siliculosus]) HSP 1 Score: 289.3 bits (739), Expect = 8.900e-75 Identity = 146/192 (76.04%), Postives = 168/192 (87.50%), Query Frame = 0 Query: 1 MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSSFNAVVLKRLFMSKTNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHD-REALSHFGHRSTVGNVHTHDNVKPYTRAKGRKFEKARGRRRSTGFKI 192 MGIDL +GGRR GHK RT+PKSDNVYL LLVKL+RFLARRTDS+F VVLKRL+MSKTNR P+++SRL R+M+ KE TAV+VGT+TDD R+LEVPKLSV AL+ T TARARIL AGGE +TFD+LALRAPKGTN VLLRGP + REA+ HFGHR+TV N+HTHD+VKPY R+KGRKFEKARGRRRS GFKI Sbjct: 1 MGIDLVAGGRRVGHKVRTSPKSDNVYLGLLVKLFRFLARRTDSAFANVVLKRLYMSKTNRAPLSLSRLARYMRNKETSTAVLVGTVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDSVKPYIRSKGRKFEKARGRRRSNGFKI 192
BLAST of NO09G02240 vs. NCBI_GenBank
Match: XP_009036910.1 (hypothetical protein AURANDRAFT_37496 [Aureococcus anophagefferens] >EGB08175.1 hypothetical protein AURANDRAFT_37496 [Aureococcus anophagefferens]) HSP 1 Score: 267.3 bits (682), Expect = 3.600e-68 Identity = 138/192 (71.88%), Postives = 158/192 (82.29%), Query Frame = 0 Query: 1 MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSSFNAVVLKRLFMSKTNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHD-REALSHFGHRSTVGNVHTHDNVKPYTRAKGRKFEKARGRRRSTGFKI 192 MGID+ +GGRR GHK RT KS+NVYLKLLVKLYRFLARRTDS+F VLKRLFMS+TNRPP+++S L R M+ K+ K AV+VGTITDD RML VPK++V AL+ T TARARI++AGGE LTFD+LALRAPKG+N VLLRGP RE SHFGHRST +V TH VKPY RAKGRKFEKARGRR S GFK+ Sbjct: 1 MGIDIVAGGRRVGHKARTDTKSENVYLKLLVKLYRFLARRTDSAFVKTVLKRLFMSRTNRPPLSLSALARFMREKDDKIAVLVGTITDDPRMLTVPKMTVCALRFTETARARIVKAGGECLTFDQLALRAPKGSNTVLLRGPKKAREVYSHFGHRSTTTSVKTHCGVKPYVRAKGRKFEKARGRRHSRGFKV 192
BLAST of NO09G02240 vs. NCBI_GenBank
Match: XP_008607735.1 (60S ribosomal protein [Saprolegnia diclina VS20] >XP_012199763.1 60S ribosomal protein [Saprolegnia parasitica CBS 223.65] >EQC38911.1 60S ribosomal protein [Saprolegnia diclina VS20] >KDO29707.1 60S ribosomal protein [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 265.8 bits (678), Expect = 1.100e-67 Identity = 133/192 (69.27%), Postives = 161/192 (83.85%), Query Frame = 0 Query: 1 MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSSFNAVVLKRLFMSKTNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHD-REALSHFGHRSTVGNVHTHDNVKPYTRAKGRKFEKARGRRRSTGFKI 192 MG D+ +GG+ TG K+RTAPKS+NVYL LLV+LYRFLARRTD+ FN VVLKRL+MS+TN+PP++I+R+ R+MK KE K AV+VGTITDD R+ +VPKL++AAL T ARAR+L AGGEILTFD+LALRAPKG N VLLRG RE HFGH ST+ +VHTHD+VKPY R+KGRKFEKARGRR+S GFK+ Sbjct: 1 MGKDIIAGGKSTGRKSRTAPKSENVYLNLLVRLYRFLARRTDAKFNEVVLKRLYMSRTNQPPMSIARVARYMKNKEDKIAVVVGTITDDIRLFDVPKLTIAALGFTEGARARVLAAGGEILTFDQLALRAPKGANTVLLRGRKTAREVYRHFGHASTLDSVHTHDHVKPYVRSKGRKFEKARGRRKSRGFKV 192
BLAST of NO09G02240 vs. NCBI_GenBank
Match: OQR99816.1 (60S ribosomal protein L18-2 [Achlya hypogyna]) HSP 1 Score: 262.7 bits (670), Expect = 9.000e-67 Identity = 131/192 (68.23%), Postives = 160/192 (83.33%), Query Frame = 0 Query: 1 MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSSFNAVVLKRLFMSKTNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHD-REALSHFGHRSTVGNVHTHDNVKPYTRAKGRKFEKARGRRRSTGFKI 192 MG D+ +GG+ TG K+RTAPKS+NVYL LLV+LYRFLARRTD+ FN VLKRL+MS+TN+PP++I+R+ R+MK KE K AV+VGTITDD R+ +VPKL++AAL T ARAR+L AGGEILTFD+LALRAPKG N VLLRG RE HFGH ST+ +VHTHD+VKPY R+KGRKFE+ARGRR+S GFK+ Sbjct: 1 MGKDIIAGGKSTGRKSRTAPKSENVYLNLLVRLYRFLARRTDAKFNECVLKRLYMSRTNQPPMSIARVARYMKNKEDKIAVVVGTITDDIRLFDVPKLTIAALGFTEGARARVLAAGGEILTFDQLALRAPKGANTVLLRGRKTAREVYRHFGHASTLDSVHTHDHVKPYVRSKGRKFERARGRRKSRGFKV 192
BLAST of NO09G02240 vs. NCBI_GenBank
Match: OQS00220.1 (60S ribosomal protein L18-2 [Thraustotheca clavata]) HSP 1 Score: 261.5 bits (667), Expect = 2.000e-66 Identity = 129/192 (67.19%), Postives = 161/192 (83.85%), Query Frame = 0 Query: 1 MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSSFNAVVLKRLFMSKTNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHD-REALSHFGHRSTVGNVHTHDNVKPYTRAKGRKFEKARGRRRSTGFKI 192 +G D+ +GG+ TG K+RT PKS+NVYL LLV+LYRFLARRTD+ FN VVLKRL+MS+TN+PP++I+R+ R+MK KE K AV+VGTITDD R+ +VPKL++AAL + +ARAR+L AGGEILTFD+LALRAPKG N VLLRG RE HFGH ST+ +VHTHD+VKPY R+KGRKFE+ARGRR+S GFK+ Sbjct: 6 IGKDIVAGGKSTGRKSRTGPKSENVYLNLLVRLYRFLARRTDAKFNEVVLKRLYMSRTNQPPMSIARVARYMKNKEDKIAVVVGTITDDIRLFDVPKLTIAALGFSESARARVLAAGGEILTFDQLALRAPKGANTVLLRGRKTAREVYRHFGHSSTLDSVHTHDHVKPYVRSKGRKFERARGRRKSRGFKV 197
BLAST of NO09G02240 vs. NCBI_GenBank
Match: XP_008876054.1 (hypothetical protein H310_11242 [Aphanomyces invadans] >ETV95353.1 hypothetical protein H310_11242 [Aphanomyces invadans]) HSP 1 Score: 260.4 bits (664), Expect = 4.400e-66 Identity = 130/192 (67.71%), Postives = 161/192 (83.85%), Query Frame = 0 Query: 1 MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSSFNAVVLKRLFMSKTNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHD-REALSHFGHRSTVGNVHTHDNVKPYTRAKGRKFEKARGRRRSTGFKI 192 MG D+ +GG+ TG K+RTAPKS+NVYL LLV+LYRFLARRTD+ FN VLKRL+MS+TN+PP++I+R+ R+MK KE + AV+VGTITDD R+ +VPKL++AAL T +ARAR+L+AGGEILTFD+LALRAPKG N VLLRG RE HFGH ST+ +V+THD+VKPY R+KGRKFEKARGRR S GFK+ Sbjct: 1 MGKDIVAGGKSTGRKSRTAPKSENVYLNLLVRLYRFLARRTDAKFNQNVLKRLYMSRTNQPPMSIARVARYMKNKEDQIAVVVGTITDDIRLFDVPKLTIAALGFTESARARVLKAGGEILTFDQLALRAPKGQNTVLLRGRKTAREVYRHFGHESTLDSVNTHDHVKPYVRSKGRKFEKARGRRNSRGFKV 192
BLAST of NO09G02240 vs. NCBI_GenBank
Match: XP_009834317.1 (hypothetical protein H257_09702 [Aphanomyces astaci] >ETV76192.1 hypothetical protein H257_09702 [Aphanomyces astaci]) HSP 1 Score: 257.7 bits (657), Expect = 2.900e-65 Identity = 130/192 (67.71%), Postives = 159/192 (82.81%), Query Frame = 0 Query: 1 MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSSFNAVVLKRLFMSKTNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHD-REALSHFGHRSTVGNVHTHDNVKPYTRAKGRKFEKARGRRRSTGFKI 192 MG D+ +GG+ TG K+RTAPKS+NVYL LLV+LYRFLARRTD+ FN VLKRL+MS+TN+PP++I+R+ R+M KE + AV+VGTITDD R+ +VPKL++AAL T +ARARIL+AGGEILTFD+LALRAPKG N VLLRG RE HFGH ST+ +V THD+VKPY R+KGRKFEKARGRR S GFK+ Sbjct: 1 MGKDIVAGGKSTGRKSRTAPKSENVYLNLLVRLYRFLARRTDAKFNQNVLKRLYMSRTNQPPLSIARVARYMNKKEDQIAVVVGTITDDIRLFDVPKLTIAALGFTESARARILKAGGEILTFDQLALRAPKGQNTVLLRGRKTAREVYRHFGHESTLDSVKTHDHVKPYVRSKGRKFEKARGRRNSRGFKV 192
BLAST of NO09G02240 vs. NCBI_GenBank
Match: PTQ30904.1 (hypothetical protein MARPO_0118s0037 [Marchantia polymorpha]) HSP 1 Score: 257.3 bits (656), Expect = 3.800e-65 Identity = 140/192 (72.92%), Postives = 155/192 (80.73%), Query Frame = 0 Query: 1 MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSSFNAVVLKRLFMSKTNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGP-HDREALSHFGHRSTVGNVHTHDNVKPYTRAKGRKFEKARGRRRSTGFKI 192 MGIDLK+GGR TRTAPKSDNVYLKLLVKLYRFL RRTD+SFNAVVLKRLFMSKT+R PI++SRL R+MKGKE K AVIVGT+TDD R+ EVP L VAAL+ T TARARIL+ GGEI TFDELAL+AP GT CVLLRGP + REA+ HFG V + HT KPY R KGRKFEKARGRR S GFK+ Sbjct: 1 MGIDLKAGGRNK-KTTRTAPKSDNVYLKLLVKLYRFLVRRTDASFNAVVLKRLFMSKTHRAPISMSRLSRYMKGKEDKIAVIVGTVTDDVRLYEVPALKVAALRFTETARARILKNGGEIYTFDELALKAPTGTGCVLLRGPKNSREAVKHFGRAPGVPHSHT----KPYVRHKGRKFEKARGRRNSRGFKV 187
BLAST of NO09G02240 vs. NCBI_GenBank
Match: XP_024369076.1 (60S ribosomal protein L18-2-like [Physcomitrella patens] >PNR60817.1 hypothetical protein PHYPA_003610 [Physcomitrella patens]) HSP 1 Score: 255.0 bits (650), Expect = 1.900e-64 Identity = 137/192 (71.35%), Postives = 158/192 (82.29%), Query Frame = 0 Query: 1 MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSSFNAVVLKRLFMSKTNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHD-REALSHFGHRSTVGNVHTHDNVKPYTRAKGRKFEKARGRRRSTGFKI 192 MGIDLK+GGR K RTAPKSDNVYLKLLVKLYRFL RRTD+ FN+VVLKRLFMS+ NRPPI++SRLV++M GKEGK AVIVGT+TDD R+ EVP L VAAL+ T TARARIL++GGE+LTFD+LALRAP G+NCVLLRGP + REA+ HFG G +H KPY R+KGRKFEKARGRR S GFK+ Sbjct: 1 MGIDLKAGGRNKKTK-RTAPKSDNVYLKLLVKLYRFLVRRTDAPFNSVVLKRLFMSRINRPPISMSRLVKYMTGKEGKIAVIVGTVTDDTRIYEVPALKVAALRFTETARARILKSGGEVLTFDQLALRAPTGSNCVLLRGPKNAREAVKHFG---APGVPQSH--AKPYVRSKGRKFEKARGRRNSRGFKV 186 The following BLAST results are available for this feature:
BLAST of NO09G02240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G02240 ID=NO09G02240|Name=NO09G02240|organism=Nannochloropsis oceanica|type=gene|length=1644bpback to top protein sequence of NO09G02240.1 >NO09G02240.1-protein ID=NO09G02240.1-protein|Name=NO09G02240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=192bpback to top Synonyms
Publications
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