NO09G01540, NO09G01540 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO09G01540 vs. NCBI_GenBank
Match: CBN74989.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 127.9 bits (320), Expect = 1.600e-25 Identity = 64/122 (52.46%), Postives = 84/122 (68.85%), Query Frame = 0 Query: 140 NEAAPTATAAPLPPTLPTAVGAAPSTGPRPPLRRGKWTFQEEAYVSRIIHDFNHGLLPLAAGTTLRAYLSDTLNCDPMRITKKFAGAACIGKRVFQPCDSSADTLERRRRAQAELEVLRKEF 262 N+ P A L + T + PR P+R+GKWT +EE Y ++II+DFN GLLPLA GTTLR+YLS+ LNCDPMRITKKFAGA+CIGKRVF P + + + L R++ ELE + ++F Sbjct: 222 NKQDPNYLATILTDSAKTVILDISQLDPRAPVRKGKWTPEEEVYTTKIINDFNKGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGASCIGKRVFMPVERTPENLIETHRSRRELEEMARKF 343
BLAST of NO09G01540 vs. NCBI_GenBank
Match: GAX14445.1 (hypothetical protein FisN_11Hh096 [Fistulifera solaris]) HSP 1 Score: 117.1 bits (292), Expect = 2.700e-22 Identity = 57/91 (62.64%), Postives = 65/91 (71.43%), Query Frame = 0 Query: 171 LRRGKWTFQEEAYVSRIIHDFNHGLLPLAAGTTLRAYLSDTLNCDPMRITKKFAGAACIGKRVFQPCDSSADTLERRRRAQAELEVLRKEF 262 LRRGKWT +EEAYV+R+I DFN G L AGTTLR YLS+ L CDPMRITKKF G ACIGKRVF P S + + +AQAEL L K + Sbjct: 157 LRRGKWTAEEEAYVARVIQDFNSGFLDAPAGTTLRTYLSEKLQCDPMRITKKFTGDACIGKRVFHPAVRSPNNVSTIDKAQAELLHLEKRW 247
BLAST of NO09G01540 vs. NCBI_GenBank
Match: EWM26570.1 (hypothetical protein Naga_100421g2 [Nannochloropsis gaditana]) HSP 1 Score: 115.2 bits (287), Expect = 1.000e-21 Identity = 71/170 (41.76%), Postives = 92/170 (54.12%), Query Frame = 0 Query: 101 VRSQPLPPCLTPIQRSTSSGDLNGQRQTG---KAALMSSSLLNEAAPTATAAPLPPTLPTAVGAAPSTG------PRPPLRRGKWTFQEEAYVSRIIHDFNHGLLPLAAGTTLRAYLSDTLNCDPMRITKKFAGAACIGKRVFQPCDSSADTLERRRRAQAELEVLRKEF 262 V LP + PI S S GQ + L ++S P T PL ++ V A S PR PLR+GKWT +EE Y II +FN GL+ L GTTLR+YLS+ LNCDPMR+TKKF+G +CIGK +F PC+++ D LE +R + L L F Sbjct: 11 VEESVLPKMIKPIDASDS-----GQPSLSPPHHSPLSAASPTRFPLPPLTLKPLARSVSNPVITASSNAHRMSLVPRVPLRKGKWTPEEEMYAHYIIDNFNKGLISLTRGTTLRSYLSERLNCDPMRVTKKFSGTSCIGKSIFCPCEATPDNLEASKRVSSRLAELEAAF 175
BLAST of NO09G01540 vs. NCBI_GenBank
Match: XP_009034023.1 (hypothetical protein AURANDRAFT_70829 [Aureococcus anophagefferens] >EGB11680.1 hypothetical protein AURANDRAFT_70829 [Aureococcus anophagefferens]) HSP 1 Score: 114.8 bits (286), Expect = 1.400e-21 Identity = 56/86 (65.12%), Postives = 66/86 (76.74%), Query Frame = 0 Query: 171 LRRGKWTFQEEAYVSRIIHDFNHGLLPLAAGTTLRAYLSDTLNCDPMRITKKFAGAACIGKRVFQPCDSSAD-TLERRRRAQAELE 256 LRRGKWT +EE YV R+I DFN+GLL A GTTLR YLS+ LNCDPMRITKKF G A IGKRV+ P +++ + +ER RR AELE Sbjct: 7 LRRGKWTVEEERYVERVIRDFNNGLLHAAPGTTLRNYLSEKLNCDPMRITKKFTGDASIGKRVYHPRENAPEPAVERARREVAELE 92
BLAST of NO09G01540 vs. NCBI_GenBank
Match: XP_002177495.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51958.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 113.2 bits (282), Expect = 4.000e-21 Identity = 74/160 (46.25%), Postives = 88/160 (55.00%), Query Frame = 0 Query: 115 RSTS-SGDLNGQRQTGKAALMSSS------------LLNEAAPTATAAPLPPTLPTAVGAAPSTGPRPPLRRGKWTFQEEAYVSRIIHDFNHGLLPLAAGTTLRAYLSDTLNCDPMRITKKFAGAACIGKRVFQPCDSSADTLERRRRAQAELEVLRKEF 262 R TS G L G Q A+ SS ++ +AP A PL T PT+ + S LRRGKWT +EEAYV+R+I DFN G L AGTTLR +LS+ L CDPMRITKKF G ACIGKRVF P S +AQAEL L + + Sbjct: 159 RPTSVQGSLPGSSQAYSASSNGSSSDHTEEPSSLPNIITTSAPGTGAQPLTSTSPTS--SNTSVRKTSGLRRGKWTVEEEAYVARVIQDFNSGFLDAPAGTTLRTFLSEKLQCDPMRITKKFTGDACIGKRVFHPAVRSPSNGTAIDKAQAELHGLERRW 316
BLAST of NO09G01540 vs. NCBI_GenBank
Match: GAX97583.1 (Hypothetical protein PINS_005457 [Pythium insidiosum]) HSP 1 Score: 112.8 bits (281), Expect = 5.200e-21 Identity = 52/95 (54.74%), Postives = 65/95 (68.42%), Query Frame = 0 Query: 168 RPPLRRGKWTFQEEAYVSRIIHDFNHGLLPLAAGTTLRAYLSDTLNCDPMRITKKFAGAACIGKRVFQPCDSSADTLERRRRAQAELEVLRKEFL 263 RP LR+GKWT +EE Y +++ F GLLP+A GT LR YLS LNC+PMRITKKF G CIGK+VF+PC + + RR +AQ EL L F+ Sbjct: 1272 RPGLRKGKWTEEEERYAAQLTMYFKEGLLPIARGTMLRLYLSQKLNCEPMRITKKFTGGECIGKQVFRPCSPTPEAKVRRMQAQLELVALEAAFI 1366
BLAST of NO09G01540 vs. NCBI_GenBank
Match: XP_009035229.1 (hypothetical protein AURANDRAFT_62630 [Aureococcus anophagefferens] >EGB10431.1 hypothetical protein AURANDRAFT_62630 [Aureococcus anophagefferens]) HSP 1 Score: 108.6 bits (270), Expect = 9.800e-20 Identity = 66/138 (47.83%), Postives = 87/138 (63.04%), Query Frame = 0 Query: 132 ALMSSSLLNEAAPTATAAPLPPTLP---TAVGAAPSTGPRPP--LRRGKWTFQEEAYVSRIIHDFNHGLLPLAAGTTLRAYLSDTLNCDPMRITKKFAGAACIGKRVFQPCDSSADTL--ERRRRAQAELEVLRKEFL 263 A ++ L +E+ A+A PP P A G P+ PR LRRGKWT +EEAY +R+IH+F GLLPL GTTLR +LS LNCDPMRI+KKF G+ CIGK+VF+ + D L + +R++ EL L + FL Sbjct: 547 AAAAAPLPDESQIEASAEKSPPRSPRSRKADGDKPAPKPRRENGLRRGKWTVEEEAYANRLIHEFKLGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLTPDDIKRSRYELAELERRFL 684
BLAST of NO09G01540 vs. NCBI_GenBank
Match: OEU18271.1 (hypothetical protein FRACYDRAFT_260330 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 107.8 bits (268), Expect = 1.700e-19 Identity = 54/97 (55.67%), Postives = 70/97 (72.16%), Query Frame = 0 Query: 168 RPPLRRGKWTFQEEAYVSRIIHDFNHGLLPLAAGTTLRAYLSDTLNCDPMRITKKFAGAACIGKRVF--QPCDSSADTLERRRRAQAELEVLRKEFL 263 R LRRGKWT +EEAY +R+I +F GLLPL GTTLR +LS LNCDPMRI+KKF G+ CIGK+VF + D + T E+ ++++AEL L + FL Sbjct: 44 RQQLRRGKWTPEEEAYANRLIQEFKAGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRTADLNRLTPEQIQKSRAELSDLERRFL 140
BLAST of NO09G01540 vs. NCBI_GenBank
Match: XP_002176339.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC42575.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 107.5 bits (267), Expect = 2.200e-19 Identity = 63/125 (50.40%), Postives = 83/125 (66.40%), Query Frame = 0 Query: 141 EAAPTATAAPLPPTLPTAVGAAPSTGPR-PPLRRGKWTFQEEAYVSRIIHDFNHGLLPLAAGTTLRAYLSDTLNCDPMRITKKFAGAACIGKRVF--QPCDSSADTLERRRRAQAELEVLRKEFL 263 EAA + A P P A+ P+ + PPLRRGKWT +EEAY +R+I +F GLLPL GTTLR +LS LNCDPMRI+KKF G+ CIGK+VF + D + T E+ ++++AEL L + FL Sbjct: 26 EAAHSMAAPPQQP--HPALDVIPNNKKKGPPLRRGKWTPEEEAYANRLILEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRTADLNRLTPEQIQQSRAELSELERRFL 148
BLAST of NO09G01540 vs. NCBI_GenBank
Match: POM60778.1 (hypothetical protein PHPALM_30338 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 107.1 bits (266), Expect = 2.800e-19 Identity = 57/128 (44.53%), Postives = 74/128 (57.81%), Query Frame = 0 Query: 135 SSSLLNEAAPTATAAPLPPTLPTAVGAAPSTGPRPPLRRGKWTFQEEAYVSRIIHDFNHGLLPLAAGTTLRAYLSDTLNCDPMRITKKFAGAACIGKRVFQPCDSSADTLERRRRAQAELEVLRKEFL 263 S SLL++ P P + + RP LR+GKWT +E Y +++ + F GLLPL GT LR YLS LNC+PMRITKKF G CIGK+VF+PC + D+ R +AQ EL L F+ Sbjct: 131 SDSLLDDPKQRKKITPKRARTPKLSSRSTKSKARPGLRKGKWTEEESRYAAQLTNYFKEGLLPLERGTMLRLYLSQKLNCEPMRITKKFTGGECIGKQVFRPCSPTPDSRVRIMQAQLELVTLEAAFI 258 The following BLAST results are available for this feature:
BLAST of NO09G01540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G01540 ID=NO09G01540|Name=NO09G01540|organism=Nannochloropsis oceanica|type=gene|length=2900bpback to top protein sequence of NO09G01540.1 >NO09G01540.1-protein ID=NO09G01540.1-protein|Name=NO09G01540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=867bpback to top Synonyms
Publications
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