NO09G01050, NO09G01050 (gene) Nannochloropsis oceanica

Overview
NameNO09G01050
Unique NameNO09G01050
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1228
Alignment locationchr9:351050..352277 +

Link to JBrowse

Properties
Property NameValue
DescriptionPre-mrna-splicing factor
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:351050..352277 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005681spliceosomal complex
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR006973Cwf_Cwc_15
Homology
[Close]
BLAST of NO09G01050 vs. NCBI_GenBank
Match: EWM27697.1 (pre-mrna-splicing factor [Nannochloropsis gaditana])

HSP 1 Score: 248.4 bits (633), Expect = 2.400e-62
Identity = 222/261 (85.06%), Postives = 230/261 (88.12%), Query Frame = 0 
Query:    7 MTTAAKSTWNSKQGGASDLGSWSLGGQTSRQFSVLDMPAHKTLKYRKTGQNTAAELRKKDLRSVLDEKERAAHMAKLQERGKGGDLGAREELRRLEAGEAAATPLLLKDKEELRQATQRFDDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAALKGNPLLASGTGSAQIKRKWNDDVVFKNQSRGETEKKKKFVNDTIRNPFHKAFLQRYMK 268
            MTTAAKSTW+SKQG A+DLGSWSLGGQTSRQFSVLDMPAH TLKYRK GQ+T +EL+KKDLR VLDEKER AH+ KLQERGKGGDL AREELR LEAGEAAATPLLLKDKEELR+A QRFD    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                SAQ+KRKWNDDVVFKNQSRGE EKKKKFVNDTIRNPFHKAFLQRYMK
Sbjct:    1 MTTAAKSTWHSKQGEAADLGSWSLGGQTSRQFSVLDMPAHTTLKYRKPGQDTVSELQKKDLRIVLDEKEREAHLIKLQERGKGGDLQAREELRHLEAGEAAATPLLLKDKEELRKAIQRFD----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAQMKRKWNDDVVFKNQSRGEGEKKKKFVNDTIRNPFHKAFLQRYMK 257
[Close]
BLAST of NO09G01050 vs. NCBI_GenBank
Match: CBN74288.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 116.7 bits (291), Expect = 1.100e-22
Identity = 143/266 (53.76%), Postives = 177/266 (66.54%), Query Frame = 0 
Query:    7 MTTAAKSTWNSKQGGASDLGSWSLGGQTSRQFSVLDMPAHKTLKYRKTGQNTAAELRKKDLRSVLDEKERAAHMAK----LQERGKGGDLGAREELRRLEAGEAAATPLLLKDKEELR-QATQRFDDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAALKGNPLLASGTGSAQIKRKWNDDVVFKNQSRGETEKKKKFVNDTIRNPFHKAFLQRYMK 268
            MTTA + TW   Q  ASD+G+WS GGQ S+  S  D+P+  TLK+RKTGQN+ AELRK+D+R+ +++ ER A   K     +   +GG    R+ L+           LLLK++ ++     +++D                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   A+ GN LL     S+Q+KR+WNDDVVFK Q+R E E KK+FVNDTIRN FH+ FL +Y+K
Sbjct:    1 MTTAHRPTWAPAQAAASDVGNWSTGGQASQAVSAHDLPSQTTLKFRKTGQNSEAELRKRDVRAEVEDSERRALDEKPATIARRYDEGGAGRGRDRLQ-----------LLLKEQGDVNLDDVKKYD--------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMTGNILLTQSNSSSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 235
[Close]
BLAST of NO09G01050 vs. NCBI_GenBank
Match: XP_008892821.1 (hypothetical protein PPTG_01328 [Phytophthora parasitica INRA-310] >ETN20980.1 hypothetical protein PPTG_01328 [Phytophthora parasitica INRA-310])

HSP 1 Score: 115.5 bits (288), Expect = 2.500e-22
Identity = 140/266 (52.63%), Postives = 172/266 (64.66%), Query Frame = 0 
Query:    7 MTTAAKSTWNSKQGGASDLGSWSLGGQTSRQFSVLDMPAHKTLKYRKTGQNTAAELRKKDLRSVLDEKERAAHMAKLQERGKGGDLGAREELRRLEAGEAAATPLLLKDKE------ELRQATQRFDDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAALKGNPLLASGTGSAQIKRKWNDDVVFKNQSRGETEKKKKFVNDTIRNPFHKAFLQRYM 267
            MTTA + TW++  G +++ G W  GG+ S Q S  D+PAHK LK R+ GQ TA E+   DLR  L+ KE    +    E+G+  D  A+++LRRLE  +     LLL D E      +L++   ++DD                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     L+GNPL     GSA++KR+WNDDVVFKNQSR E E KK+F+NDTIRN FH+ FL +Y+
Sbjct:    1 MTTAHRPTWHAAVGQSNE-GGWHAGGKLSDQVSARDLPAHKRLKMRQVGQGTANEVELLDLREELERKEEKYEL----EKGRKKDT-AQDKLRRLEENKKI---LLLGDAEADEKESQLKKVASKYDD--------------------ADDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSREEILQGNPLTQQAAGSAKMKRRWNDDVVFKNQSRNEPEVKKRFINDTIRNDFHRRFLSKYI 237
[Close]
BLAST of NO09G01050 vs. NCBI_GenBank
Match: ETI45712.1 (hypothetical protein F443_09806 [Phytophthora parasitica P1569] >ETK85655.1 hypothetical protein L915_09614 [Phytophthora parasitica] >ETL39089.1 hypothetical protein L916_09513 [Phytophthora parasitica] >ETL92202.1 hypothetical protein L917_09444 [Phytophthora parasitica] >ETM45507.1 hypothetical protein L914_09480 [Phytophthora parasitica] >ETO74354.1 hypothetical protein F444_09904 [Phytophthora parasitica P1976] >ETP15524.1 hypothetical protein F441_09751 [Phytophthora parasitica CJ01A1] >ETP43598.1 hypothetical protein F442_09708 [Phytophthora parasitica P10297])

HSP 1 Score: 115.2 bits (287), Expect = 3.200e-22
Identity = 143/266 (53.76%), Postives = 175/266 (65.79%), Query Frame = 0 
Query:    7 MTTAAKSTWNSKQGGASDLGSWSLGGQTSRQFSVLDMPAHKTLKYRKTGQNTAAELRKKDLRSVLDEKERAAHMAKLQERGKGGDLGAREELRRLEAGEAAATPLLLKDKE------ELRQATQRFDDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAALKGNPLLASGTGSAQIKRKWNDDVVFKNQSRGETEKKKKFVNDTIRNPFHKAFLQRYM 267
            MTTA + TW++  G +++ G W  GG+ S Q S  D+PAHK LK R+ GQ TA E+   DLR  L+ KE    +    E+G+  D  A+++LRRLE  +     LLL D E      +L++   ++DD                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    L+GNPL     GSA++KR+WNDDVVFKNQSR E E KK+F+NDTIRN FH+ FL +Y+
Sbjct:    1 MTTAHRPTWHAAVGQSNE-GGWHAGGKLSDQVSARDLPAHKRLKMRQVGQGTANEVELLDLREELERKEEKYEL----EKGRKKDT-AQDKLRRLEENKKI---LLLGDAEADEKESQLKKVASKYDD--------------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILQGNPLTQQAAGSAKMKRRWNDDVVFKNQSRNEPEVKKRFINDTIRNDFHRRFLSKYI 237
[Close]
BLAST of NO09G01050 vs. NCBI_GenBank
Match: XP_009827407.1 (hypothetical protein H257_04539 [Aphanomyces astaci] >ETV82736.1 hypothetical protein H257_04539 [Aphanomyces astaci])

HSP 1 Score: 113.2 bits (282), Expect = 1.200e-21
Identity = 142/268 (52.99%), Postives = 176/268 (65.67%), Query Frame = 0 
Query:    7 MTTAAKSTWNSKQGGASDLGSWSLGGQTSRQFSVLDMPAHKTLKYRKTGQNTAAELRKKDLRSVLDEKERAAHMAKLQERGKGGDLGAREELRRLEAGEAAATPLLLKDKE---ELRQATQRFDDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAALKGNPLL----ASGTGSAQIKRKWNDDVVFKNQSRGETEKKKKFVNDTIRNPFHKAFLQRYMK 268
            MTTAA+ TWN+  G  ++ G W+ GGQ S QFS  D+P HK LK R+ GQ T  EL  +DL+S L ++ER      L+E+GK  D+ A++++ RL+  +     LLLK  E     ++   ++DD                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        L GNPL     ++ +GSA IKRKWNDDVVFKNQ+R E E KK+F+NDTIRN FH+ FL+ Y++
Sbjct:    1 MTTAARPTWNAAVGQKNE-GGWNSGGQVSMQFSARDLPGHKKLKTRQLGQGTVDELELRDLKSELTDRER----KYLEEKGKVVDV-AQQKILRLKENKM----LLLKGDEWEDRAKEVQTQYDD-------------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESLRKEEILLGNPLTSRQSSNPSGSATIKRKWNDDVVFKNQTRNEPETKKRFINDTIRNDFHRRFLKTYIQ 239
[Close]
BLAST of NO09G01050 vs. NCBI_GenBank
Match: POM59396.1 (Cwf15/Cwc15 cell cycle control protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 112.8 bits (281), Expect = 1.600e-21
Identity = 144/268 (53.73%), Postives = 177/268 (66.04%), Query Frame = 0 
Query:    7 MTTAAKSTWNSKQGGASDLGSWSLGGQTSRQFSVLDMPAHKTLKYRKTGQNTAAELRKKDLRSVLDEKERAAHMAKLQERGKGGDLGAREELRRLEAGEAAATPLLLKDKE------ELRQATQRFDDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAALKGNPLL-ASGTGSAQIKRKWNDDVVFKNQSRGETEKKKKFVNDTIRNPFHKAFLQRYMK 268
            MTTA + TW++  G +++ G W  GG+ S Q S  D+PAHK LK R+ GQ TA E+   DLR  L+ KE    +    E+G+  D  A+++LRRLE  +     LLL D E      +L++   ++DD                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    L+GNPL     TGSA++KR+WNDDVVFKNQSR E E KK+F+NDTIRN FH+ FL +Y++
Sbjct:    1 MTTAHRPTWHAAVGQSNE-GGWHAGGKLSDQVSARDLPAHKRLKIRQVGQGTANEVELLDLREELERKEEKYEL----EKGRKKDT-AQDKLRRLEENKKI---LLLGDAEADERESQLKKVASKYDD--------------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEILQGNPLTQQQATGSAKMKRRWNDDVVFKNQSRNEPEVKKRFINDTIRNDFHRRFLNKYIQ 239
[Close]
BLAST of NO09G01050 vs. NCBI_GenBank
Match: KUF77308.1 (CWC15 protein [Phytophthora nicotianae])

HSP 1 Score: 112.5 bits (280), Expect = 2.100e-21
Identity = 143/266 (53.76%), Postives = 175/266 (65.79%), Query Frame = 0 
Query:    7 MTTAAKSTWNSKQGGASDLGSWSLGGQTSRQFSVLDMPAHKTLKYRKTGQNTAAELRKKDLRSVLDEKERAAHMAKLQERGKGGDLGAREELRRLEAGEAAATPLLLKDKE------ELRQATQRFDDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAALKGNPLLASGTGSAQIKRKWNDDVVFKNQSRGETEKKKKFVNDTIRNPFHKAFLQRYM 267
            MTTA + TW++  G +++ G W  GG+ S Q S  D+PAHK LK R+ GQ TA E+   DLR  L+ KE    +    E+G+  D  A+++LRRLE  +     LLL D E      +L++   ++DD                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    L+GNPL      SA++KR+WNDDVVFKNQSR E E KK+F+NDTIRN FH+ FL +Y+
Sbjct:    1 MTTAHRPTWHAAVGQSNE-GGWHAGGKLSDQVSARDLPAHKRLKMRQVGQGTANEVELLDLREELERKEEKYEL----EKGRKKDT-AQDKLRRLEENKKI---LLLGDAEADEKESQLKKVASKYDD------------------ADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILQGNPLTQQAADSAKMKRRWNDDVVFKNQSRNEPEVKKRFINDTIRNDFHRRFLSKYI 239
[Close]
BLAST of NO09G01050 vs. NCBI_GenBank
Match: OWZ22644.1 (hypothetical protein PHMEG_0002623 [Phytophthora megakarya])

HSP 1 Score: 111.7 bits (278), Expect = 3.600e-21
Identity = 137/267 (51.31%), Postives = 171/267 (64.04%), Query Frame = 0 
Query:    7 MTTAAKSTWNSKQGGASDLGSWSLGGQTSRQFSVLDMPAHKTLKYRKTGQNTAAELRKKDLRSVLDEKERAAHMAKLQERGKGGDLGAREELRRLEAGEAAATPLLLKDKE------ELRQATQRFDDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAALKGNPLLASGTGSAQIKRKWNDDVVFKNQSRGETEKKKKFVNDTIRNPFHKAFLQRYMK 268
            MTTA + TW++  G +++ G W  GG+ S Q S  D+PAHK LK R+ GQ TA E+   DLR  L+ KE      K +++       A+++LRRLE  +     LLL D E      +L++   +++D                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    L+GNPL     GSA++KR+WNDDVVFKNQSR E E KK+F+NDTIRN FH+ FL +Y++
Sbjct:    1 MTTAHRPTWHAAVGQSNE-GGWHAGGKLSDQVSARDLPAHKRLKTRQVGQGTANEVELLDLREELERKEEXXXXXKGRKKN-----SAQDKLRRLEENKKI---LLLGDAEADERESQLKKVASKYND--------------------ADDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEILQGNPLTQQAAGSAKMKRRWNDDVVFKNQSRNEPELKKRFINDTIRNDFHRRFLNKYIQ 238
[Close]
BLAST of NO09G01050 vs. NCBI_GenBank
Match: GAX98861.1 (Hypothetical protein PINS_006706 [Pythium insidiosum])

HSP 1 Score: 109.4 bits (272), Expect = 1.800e-20
Identity = 141/269 (52.42%), Postives = 173/269 (64.31%), Query Frame = 0 
Query:    7 MTTAAKSTWNSKQGGASDLGSWSLGGQTSRQFSVLDMPAHKTLKYRKTGQNTAAELRKKDLRSVLDEKERAAHMAKLQERGKGGDLGAREELRRLEAGEAAATPLLLKDKE------ELRQATQRFDDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAALKGNPLLASGTGS--AQIKRKWNDDVVFKNQSRGETEKKKKFVNDTIRNPFHKAFLQRYMK 268
            MTTA + TW++  G  S+ G W  GGQ S+QFS  D+P H  LK R+ GQ TA E+  +DLR+ L+ +E+       +E+ K  D   +  LRRLE  +     LLL D E      +L+    ++D                   XXXXXXXXXXXXXXXXXXXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXX    L+GNPL A+ T S  A++KR+WNDDVVFKNQSR E E KK+F+NDTIRN FH+ FL +Y++
Sbjct:    1 MTTAHRPTWHAAVGQKSE-GGWQTGGQVSQQFSARDLPGHTKLKLRQVGQGTANEVEARDLRAELEGREQQYE----EEKSKNSD-SVQARLRRLEENKKI---LLLGDAEADARESQLKSVASKYD-------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXMRELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGNPLTAAQTASANAKMKRRWNDDVVFKNQSRNEPELKKRFINDTIRNDFHRRFLNKYVQ 241
[Close]
BLAST of NO09G01050 vs. NCBI_GenBank
Match: XP_002897060.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY66541.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 109.0 bits (271), Expect = 2.300e-20
Identity = 134/267 (50.19%), Postives = 167/267 (62.55%), Query Frame = 0 
Query:    7 MTTAAKSTWNSKQGGASDLGSWSLGGQTSRQFSVLDMPAHKTLKYRKTGQNTAAELRKKDLRSVLDEKERAAHMAKLQERGKGGDLGAREELRRLEAGEAAATPLLLKDKE------ELRQATQRFDDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAALKGNPLL-ASGTGSAQIKRKWNDDVVFKNQSRGETEKKKKFVNDTIRNPFHKAFLQRYM 267
            MTTA + TW++  G +++ G W  GG+ S Q S  D+PAHK LK R+ GQ TA E+   DLR  L+ KE    +    E+G+  D  A+++LRRLE  +     LLL D E      +L++   +++D                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          L+GNPL      GSA++KR+WNDDVVFKNQSR E E KK+F+NDTIRN FH+ FL +Y+
Sbjct:    1 MTTAHRPTWHAAVGQSNE-GGWHAGGKLSDQVSARDLPAHKRLKMRQVGQGTANEVELLDLREELERKEEKYEV----EKGRKKDT-AQDKLRRLEENKKI---LLLGDAEADAKESQLKEVASKYND--------------------ADDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVELQSREEILQGNPLTQQQAAGSAKMKRRWNDDVVFKNQSRNEPEVKKRFINDTIRNDFHRRFLNKYI 238
The following BLAST results are available for this feature:
BLAST of NO09G01050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27697.12.400e-6285.06pre-mrna-splicing factor [Nannochloropsis gaditana... [more]
CBN74288.11.100e-2253.76conserved unknown protein [Ectocarpus siliculosus][more]
XP_008892821.12.500e-2252.63hypothetical protein PPTG_01328 [Phytophthora para... [more]
ETI45712.13.200e-2253.76hypothetical protein F443_09806 [Phytophthora para... [more]
XP_009827407.11.200e-2152.99hypothetical protein H257_04539 [Aphanomyces astac... [more]
POM59396.11.600e-2153.73Cwf15/Cwc15 cell cycle control protein [Phytophtho... [more]
KUF77308.12.100e-2153.76CWC15 protein [Phytophthora nicotianae][more]
OWZ22644.13.600e-2151.31hypothetical protein PHMEG_0002623 [Phytophthora m... [more]
GAX98861.11.800e-2052.42Hypothetical protein PINS_006706 [Pythium insidios... [more]
XP_002897060.12.300e-2050.19conserved hypothetical protein [Phytophthora infes... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL119nonsL119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010587NSK010587Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G01050.1NO09G01050.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|639177gene_4450Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100104g26gene2881Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G01050.1NO09G01050.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G01050 ID=NO09G01050|Name=NO09G01050|organism=Nannochloropsis oceanica|type=gene|length=1228bp
ATGgtaatcgtgggggaagtggtgacttatgtttgccgaagactgacaat
ttggaggatcccttccttactgtctgctccagtagccataccgcaatccc
tccactaaccacctctgctccctcgcttcgcaaatcacagGACTACCGCA
TCACCATGACAACGGCAGCCAAATCAACATGGAACTCTAAGCAGGGGGGG
GCCTCTGACCTGGGCAGCTGGAGCCTCGGCGGGCAGACGTCCCGGCAATT
TTCTGTCCTTGACATGCCCGCGCACAAGACCCTCAAGTATCGGAAAACGG
GCCAAAACACGGCGGCGGAGTTGCGCAAAAAGGATTTGCGGAGCGTGCTG
GACGAGAAGGAGCGGGCGGCACACATGGCCAAGCTGCAGGAACGTGGCAA
GGGAGGGGATTTGGGCGCCCGCGAAGAGCTGCGGCGGTTGGAGGCGGGAG
AGGCCGCAGCCACGCCCTTGTTGCTCAAGGACAAAGAAGAACTTCGCCAA
GCCACCCAGCGCTTTGACGATCGCGATGATGAGGCGAATGATGACGATGA
TGATGCGGGCGGGGTGGGTGGGACCGGGATTGAGAGTGATTTGGATAGCA
GCGACGACAGCGACGATGACGATGACGACGACGACGAAGACCTGTTACGT
TTGGAGTTGGAAAAAATCAAGCAGGAGCGGGAAGAGGCTCGTCGGAAGCA
GGAGGATGAGGACAAGGCCGAGGCAGCCCGAATGAAGGAGGATGAAATCA
ATGCGGCGGCCTTGAAGGGAAACCCGCTCCTAGCAAGTGGTACTGGTAGT
GCACAGATCAAGCGTAAATGGAACGACGACGTGGTCTTCAAGAACCAATC
TCGGGGGGAGACGGAGAAGAAGAAGAAGTTTGTAAACGATACGATCCGCA
ATCCGTTCCACAAGGCTTTCTTGCAGCGGTACATGAAGTAAGAGTTGTGT
GTGTACGTGTGAGTGTGTGTTCATCTCATTTCCGTTTGTCCATAGAAAAA
TCTGCCTGAAAAACGAAAAAAGAAGGAACGAAAGATTTCTACCTGACAGT
TCATCTAAAAGAGGTTGATACTGAGGGTAACGTCCAAAGGAAACCTCTCT
TTGCCATAAATCAAACAATAATGACATCTAGAGCGAGCGCCAGCGCCACG
CCTCGGTCCTCCTTCTCCTCCTTCAGCTTGTCAAAAAATTAACCGGAAAT
GCATGAGCATACTTTTCTGCAAGTCACG
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protein sequence of NO09G01050.1

>NO09G01050.1-protein ID=NO09G01050.1-protein|Name=NO09G01050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=268bp
MDYRITMTTAAKSTWNSKQGGASDLGSWSLGGQTSRQFSVLDMPAHKTLK
YRKTGQNTAAELRKKDLRSVLDEKERAAHMAKLQERGKGGDLGAREELRR
LEAGEAAATPLLLKDKEELRQATQRFDDRDDEANDDDDDAGGVGGTGIES
DLDSSDDSDDDDDDDDEDLLRLELEKIKQEREEARRKQEDEDKAEAARMK
EDEINAAALKGNPLLASGTGSAQIKRKWNDDVVFKNQSRGETEKKKKFVN
DTIRNPFHKAFLQRYMK*
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Synonyms
Publications