NO08G04240, NO08G04240 (gene) Nannochloropsis oceanica

Overview
NameNO08G04240
Unique NameNO08G04240
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3813
Alignment locationchr8:1227454..1231266 +

Link to JBrowse

Properties
Property NameValue
DescriptionGDT1-like protein C17G8.08c
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:1227454..1231266 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001727UPF0016
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
[Close]
BLAST of NO08G04240 vs. NCBI_GenBank
Match: CBJ30133.1 (transmembrane protein TPARL, putative [Ectocarpus siliculosus])

HSP 1 Score: 147.5 bits (371), Expect = 8.900e-32
Identity = 77/125 (61.60%), Postives = 95/125 (76.00%), Query Frame = 0 
Query:  111 ASDVDESGMPILGFWPAFFNSLSMILVTELGDKTFFIAAVLAMRYDRLLIFGGAIGALILMTILSAAIGNVLPNVLPRKYTHYASAFLFLYFGIKLLMEAQGMEG-SGPSDELQEVEEELLHKKE 235
            A    E   P +GFW AF NS++MI+ TE+GDKTFFIAA++AM + RL +FGGA+GAL +MT+LSAA+G  LP +LPR YTHYASA LFLYFG ++L E  GME   GPS+EL EVEEEL  K+E
Sbjct:   35 AVSAGEGEPPQVGFWTAFANSVAMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILPRTYTHYASALLFLYFGFRMLKE--GMESHGGPSEELTEVEEELAKKRE 157
[Close]
BLAST of NO08G04240 vs. NCBI_GenBank
Match: GAX12042.1 (hypothetical protein FisN_8Lh143 [Fistulifera solaris])

HSP 1 Score: 136.7 bits (343), Expect = 1.600e-28
Identity = 67/106 (63.21%), Postives = 85/106 (80.19%), Query Frame = 0 
Query:  124 FWPAFFNSLSMILVTELGDKTFFIAAVLAMRYDRLLIFGGAIGALILMTILSAAIGNVLPNVLPRKYTHYASAFLFLYFGIKLLMEAQGMEGSGPSDELQEVEEEL 230
            FW +F + +++IL TE+GDKTFFIAA+L+M++ R  +FGGAIGAL++MTILS A+G VLP VLPRKYTH   + LFLYFG KLL EA+GM     S+EL+EVEEEL
Sbjct:   76 FWKSFTSGVAVILATEIGDKTFFIAAILSMKHSRSAVFGGAIGALVIMTILSTAMGLVLPQVLPRKYTHILGSILFLYFGCKLLYEARGMNAGKTSEELEEVEEEL 181
[Close]
BLAST of NO08G04240 vs. NCBI_GenBank
Match: GAX18925.1 (hypothetical protein FisN_8Hh143 [Fistulifera solaris])

HSP 1 Score: 134.8 bits (338), Expect = 6.000e-28
Identity = 66/106 (62.26%), Postives = 84/106 (79.25%), Query Frame = 0 
Query:  124 FWPAFFNSLSMILVTELGDKTFFIAAVLAMRYDRLLIFGGAIGALILMTILSAAIGNVLPNVLPRKYTHYASAFLFLYFGIKLLMEAQGMEGSGPSDELQEVEEEL 230
            FW +F + +++IL TE+GDKTFFIAA+L+M++ R  +FGGAI AL++MTILS A+G VLP VLPR+YTH   + LFLYFG KLL EA+GM     SDEL+EVEEEL
Sbjct:   75 FWKSFTSGVAVILATEIGDKTFFIAAILSMKHSRSAVFGGAIAALVIMTILSTAMGLVLPQVLPRRYTHILGSILFLYFGCKLLYEARGMNAGKTSDELEEVEEEL 180
[Close]
BLAST of NO08G04240 vs. NCBI_GenBank
Match: XP_009035125.1 (hypothetical protein AURANDRAFT_22875, partial [Aureococcus anophagefferens] >EGB10318.1 hypothetical protein AURANDRAFT_22875, partial [Aureococcus anophagefferens])

HSP 1 Score: 132.1 bits (331), Expect = 3.900e-27
Identity = 71/116 (61.21%), Postives = 88/116 (75.86%), Query Frame = 0 
Query:  124 FWPAFFNSLSMILVTELGDKTFFIAAVLAMRYDRLLIFGGAIGALILMTILSAAIGNVLPNVLPRKYTHYASAFLFLYFGIKLLMEAQGMEGSGPSDELQEVEEEL---LHKKEDV 237
            F  AF NS+ MI  TE+GDKTFFIAA+LAM++ RL+IF GA+ AL +MT+LSAA+G  LP ++PR YTHYASA LF YFG ++L +A  M GSG S+EL EVEEEL    H K+DV
Sbjct:    1 FAAAFVNSMGMIWATEIGDKTFFIAAILAMKHARLVIFLGAVSALAVMTVLSAAMGYALPALMPRTYTHYASALLFFYFGCRMLKDASSMSGSGVSEELGEVEEELGGAGHGKKDV 116
[Close]
BLAST of NO08G04240 vs. NCBI_GenBank
Match: XP_005830316.1 (hypothetical protein GUITHDRAFT_73189 [Guillardia theta CCMP2712] >EKX43336.1 hypothetical protein GUITHDRAFT_73189 [Guillardia theta CCMP2712])

HSP 1 Score: 131.7 bits (330), Expect = 5.100e-27
Identity = 72/127 (56.69%), Postives = 93/127 (73.23%), Query Frame = 0 
Query:  127 AFFNSLSMILVTELGDKTFFIAAVLAMRYDRLLIFGGAIGALILMTILSAAIGNVLPNVLPRKYTHYASAFLFLYFGIKLLMEAQGMEGSGPSDELQEVEEELLHKKEDVCHSPHSTEMTHLENGSS 254
            AFF+SL MI+V+ELGDKTFFIAAVLAM+  R  +  GA+GAL +MT+LSAA G  LPN++PR YTHYAS  LF++FG KLL +A+ M+ SGPS+EL+EVE EL        +     + T LE+G+S
Sbjct:   14 AFFSSLMMIIVSELGDKTFFIAAVLAMKNPRSTVLAGALGALWVMTVLSAAAGFALPNLIPRMYTHYASVCLFIFFGAKLLKDAKDMQTSGPSEELEEVEAEL--------NKTDKKKNTDLESGAS 132
[Close]
BLAST of NO08G04240 vs. NCBI_GenBank
Match: OEU15279.1 (UPF0016-domain-containing protein, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 130.2 bits (326), Expect = 1.500e-26
Identity = 65/113 (57.52%), Postives = 85/113 (75.22%), Query Frame = 0 
Query:  123 GFWPAFFNSLSMILVTELGDKTFFIAAVLAMRYDRLLIFGGAIGALILMTILSAAIGNVLPNVLPRKYTHYASAFLFLYFGIKLLMEAQGMEGSGPSDELQEVEEELLHKKED 236
            GFW  F + ++MIL TE+GDKTFFIAAVL+MR  R  +F GA+ AL +MT+LS+ +G VLP ++P  YTH     LFLYFG KLL +A+GM+ +  SDEL+EVE+ELLH K+D
Sbjct:    3 GFWKGFTSGVAMILATEIGDKTFFIAAVLSMRQQRSAVFIGAVSALYVMTVLSSIMGLVLPKLVPVAYTHILGGLLFLYFGFKLLFDAKGMDKNQVSDELEEVEDELLHPKKD 115
[Close]
BLAST of NO08G04240 vs. NCBI_GenBank
Match: XP_002178343.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC50008.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 127.9 bits (320), Expect = 7.300e-26
Identity = 66/117 (56.41%), Postives = 89/117 (76.07%), Query Frame = 0 
Query:  123 GFWPAFFNSLSMILVTELGDKTFFIAAVLAMRYDRLLIFGGAIGALILMTILSAAIGNVLPNVLPRKYTHYASAFLFLYFGIKLLMEAQGMEGSGPSDELQEVEEELLH---KKEDV 237
            GFW AF +S++MI+ TE+GDKTFFIAAVL+M++ R  +F GAI ALI+MT+LS A+G +LPN +P++YTH     LFLYFG KL+ +++ ME    S+EL+EVEEELL    KK D+
Sbjct:    3 GFWNAFTSSVAMIIATEIGDKTFFIAAVLSMKHSRSAVFFGAILALIVMTVLSTAMGMMLPNFIPKEYTHLLGGLLFLYFGCKLIYDSRQMEAGKTSEELEEVEEELLQQGKKKADL 119
[Close]
BLAST of NO08G04240 vs. NCBI_GenBank
Match: CCI11370.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 125.2 bits (313), Expect = 4.700e-25
Identity = 59/110 (53.64%), Postives = 82/110 (74.55%), Query Frame = 0 
Query:  124 FWPAFFNSLSMILVTELGDKTFFIAAVLAMRYDRLLIFGGAIGALILMTILSAAIGNVLPNVLPRKYTHYASAFLFLYFGIKLLMEAQGMEGSGPSDELQEVEEELLHKK 234
            FW  F + +  I  TE+GDKTFFIAA+L+M++DR+++F GAIGALI+MT+LS  +G V    LP+  THYA A LF++FG+K+L +++ M  SGPS EL EVEEEL  ++
Sbjct:  118 FWAGFASGILSIWATEVGDKTFFIAAILSMKHDRIIVFAGAIGALIVMTVLSVVLGGVAARFLPKYMTHYAGAMLFVFFGLKMLYDSRDMSDSGPSSELDEVEEELAGRR 227
[Close]
BLAST of NO08G04240 vs. NCBI_GenBank
Match: XP_008619503.1 (hypothetical protein SDRG_15117 [Saprolegnia diclina VS20] >EQC27109.1 hypothetical protein SDRG_15117 [Saprolegnia diclina VS20])

HSP 1 Score: 124.8 bits (312), Expect = 6.200e-25
Identity = 78/201 (38.81%), Postives = 116/201 (57.71%), Query Frame = 0 
Query:   49 VLAVLLIGVITLISAENVLPDSGSGDGSVVFFRAD------NFGDDAYPALGEEGGKGKRIEGAAEVMASDVDESGM-----PILGFWPAFFNSLSMILVTELGDKTFFIAAVLAMRYDRLLIFGGAIGALILMTILSAAIGNVLPNVLPRKYTHYASAFLFLYFGIKLLMEAQGMEGSGPSDELQEVEEELLHKK--EDV 237
            VL +LL+ +++++   +   D+   D   V  R +         D   P L    G       +      D + +G+      +  FW  F + +  I  TE+GDKTFFIAA+L+M++DR+++F GAIGALI+MT+LS  +G V    LP + THYA AFLF++FG+K+L +++ M  +GPS+EL EVEEEL  KK  EDV
Sbjct:    6 VLLLLLLTLVSVVGQRDAF-DAADEDHDGVLQRREFDKWSARVRDAIDPLLAPSSGVKPLAAASNRDRDDDANNTGLKRVKNKVNKFWSGFMSGIITIWATEVGDKTFFIAAILSMKHDRIVVFAGAIGALIVMTVLSVVLGGVAAFFLPPRLTHYAGAFLFVFFGLKMLYDSREMNANGPSEELTEVEEELEGKKNAEDV 205
[Close]
BLAST of NO08G04240 vs. NCBI_GenBank
Match: XP_008903205.1 (hypothetical protein PPTG_10293 [Phytophthora parasitica INRA-310] >ETI50825.1 hypothetical protein F443_05695 [Phytophthora parasitica P1569] >ETK90706.1 hypothetical protein L915_05557 [Phytophthora parasitica] >ETL44114.1 hypothetical protein L916_05499 [Phytophthora parasitica] >ETL97286.1 hypothetical protein L917_05385 [Phytophthora parasitica] >ETM50436.1 hypothetical protein L914_05508 [Phytophthora parasitica] >ETN11404.1 hypothetical protein PPTG_10293 [Phytophthora parasitica INRA-310] >ETO79554.1 hypothetical protein F444_05747 [Phytophthora parasitica P1976] >ETP20604.1 hypothetical protein F441_05703 [Phytophthora parasitica CJ01A1] >ETP48524.1 hypothetical protein F442_05742 [Phytophthora parasitica P10297])

HSP 1 Score: 124.8 bits (312), Expect = 6.200e-25
Identity = 61/112 (54.46%), Postives = 81/112 (72.32%), Query Frame = 0 
Query:  124 FWPAFFNSLSMILVTELGDKTFFIAAVLAMRYDRLLIFGGAIGALILMTILSAAIGNVLPNVLPRKYTHYASAFLFLYFGIKLLMEAQGMEGSGPSDELQEVEEELLHKKED 236
            FW  F + +  I  TE+GDKTFFIAA+L+M+ DR+++F GAIGALI+MT+LS  +G V    LP   THY    LF+ FG+K+L +A+ M  +GPSDEL EVEEEL+ KK+D
Sbjct:  112 FWSGFVSGILTIWATEIGDKTFFIAAILSMKKDRVVVFAGAIGALIVMTVLSVVMGVVATKFLPPSLTHYLGGVLFVVFGVKMLYDAREMNAAGPSDELNEVEEELMGKKDD 223
The following BLAST results are available for this feature:
BLAST of NO08G04240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBJ30133.18.900e-3261.60transmembrane protein TPARL, putative [Ectocarpus ... [more]
GAX12042.11.600e-2863.21hypothetical protein FisN_8Lh143 [Fistulifera sola... [more]
GAX18925.16.000e-2862.26hypothetical protein FisN_8Hh143 [Fistulifera sola... [more]
XP_009035125.13.900e-2761.21hypothetical protein AURANDRAFT_22875, partial [Au... [more]
XP_005830316.15.100e-2756.69hypothetical protein GUITHDRAFT_73189 [Guillardia ... [more]
OEU15279.11.500e-2657.52UPF0016-domain-containing protein, partial [Fragil... [more]
XP_002178343.17.300e-2656.41predicted protein, partial [Phaeodactylum tricornu... [more]
CCI11370.14.700e-2553.64unnamed protein product [Albugo candida][more]
XP_008619503.16.200e-2538.81hypothetical protein SDRG_15117 [Saprolegnia dicli... [more]
XP_008903205.16.200e-2554.46hypothetical protein PPTG_10293 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL105nonsL105Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006556NSK006556Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G04240.1NO08G04240.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO08G04240.2NO08G04240.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|373269gene_3768Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101526g1gene3651Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G04240.1NO08G04240.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO08G04240.2NO08G04240.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G04240 ID=NO08G04240|Name=NO08G04240|organism=Nannochloropsis oceanica|type=gene|length=3813bp
ACCACAGACTCAAGACGACAAGGCGTGGCACTGCTGCTACGCTGGCTGCG
AGCTTTTCTTCACCTCCGGCTTGGAGTGTGCGCGCCCTCTCGTCTTGTCA
CGTTCTCTGTTGACGAAGGAAGACCACCATCATCATCAGAAGGAGTCTCG
CCAAGTCAAGGCCTTAATACTCCTCTCAACGACCAGAAACAACCAGCAGT
GGTACTGAGATAACAATGCCAAGAAGAAGAGTCACCCACAGCACCTCATC
TCTTGCCCCTCCTCCCCTCTCCCGCTCCACGTCCTCCTCTTCGTGGTTGT
CGTCCTCCTCCACCTTCTCTTCTAAGCCCAGGCGCTCCCTCTGCATGGGC
AGCCTCCTCGTGCTTGCCGTCCTTCTCATTGGCGTGATCACTCTAATCAG
CGCAGAGgtacgtgcaatatgaagccccccttttacctcccttcttccct
ccgttttcccctcctctccctcttcctctactccctgtcgactcctcagc
tcatcctccctccctccctccctccctccctcctcccctccctctccctc
acagAATGTGCTCCCCGACAGCGGGAGCGGGGATGGCAGCGTCGTTTTCT
TTCGGGCAGACAACTTCGGGGATGACGCTTATCCAGCCCTGGGGGAGGAG
GGAGGGAAGGGAAAAAGGATCGAGGGGGCGGCAGAGGTTATGGCCTCCGA
TGTAGACGAGgtgaggaggagggaaggagggagagagaaaattgtcccgt
caaacagggatgccgcatactataagtcatctcacacctcattccatctt
ctcccaccctccctccctccctcccatcctccctccctccctccttccct
ccctccctccctccctcctctgcagTCGGGTATGCCCATCCTGGGCTTCT
GGCCCGCATTTTTTAACTCCCTGTCCATGATCCTCGTTACAGAGCTGGGG
GACAAGACATTTTTCATCGCTGCCGTGCTGGCCATGCGCTACGACCGACT
CCTCATCTTCGGCGGGGCCATTGgtaagtgggagggggagagagagggag
ggagggagggagggaggaaggaatgcattaaagaacttgaccttgatatc
tcttattggtgctcacagctccttgttcctccgtgcctccctccctcccc
tgcctccctccctccgtgcctcccttcctccctccctccccccctctctc
cgacgctgcctgtctttctgttcagGGGCCCTAATCCTGATGACCATCCT
CTCGGCCGCCATCGGCAACGTCCTCCCTAATGTACTCCCCCGGAAATACA
CACATTACGCCTCAGCGgtacgtccatccctccctcgctccctccctcgc
tccctccctcgctccctccctcttcctcgactccccatcgttctccctcg
gcccatccctcctccctttttcccttcctccctccctccctcagTTCCTC
TTCCTCTACTTCGGCATCAAGCTCCTCATGGAAGCTCAGGGCATGGAGGG
TTCTGGCCCCAGCGACGAGCTCCAGGAGGTGGAGGAGGAACTACTTCACA
AGAAAGAAGgtactttccccttccctccctcccttcctccctcccttcct
ccgtccctccgtccctccctccgtccctccctccctcccgctgttttcct
ttcttttcgttctcgcttttgctcacctgatgcaacggtcgtgccgtttc
gaccatatttcatcctccctccctccctccctcccttcccccagACGTAT
GCCATTCCCCCCACTCGACTGAGATGACGCACCTCGAGAATGGCAGCAGC
AGCAACAACAGCAGCAACAACAGCGGCAGTTGCAGCGAGGGAGGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGAGAGGAGCGGGTCGCCGTTGGGAG
GGGGCCATGGGCGGCAGGGATCATACCACCCGCAGGACAGTAGAGGGAAG
GGGGGGGGAGGGACGAAGGTGTTCACGCAGgtacgggagggagggaggga
ggggaggagaggagaggaaaggagaggagcgagagggacgaggatggttt
ctgttgggaaggaagggagggacggagggagggaaaagaagaaacaggag
gacagacgattgatctttcccctccctccctccctccctcccttccgtcc
tccctcccgtcctctctctcccagGCCCTCACCCTCACCTTTCTGGCCGA
ATGGGGAGACCGCTCTCAAATCGCGACGATCGCCCTCGCTGCTGCCAAGG
ATCCCTTTGGTGgtacgtcccctccctccctccctccctccctccctccc
tccctttctccccccaaagtaatggctgctggccttctctgcccaggccc
accctcccttaccccctctccctccctccacccctccctccctccctcca
gTGACGGCCGGGGGCATCTTAGGCCACTCGCTGTGCACGGGGCTGGCGGT
AGTAGGTGGCCGCATGCTGGCTGCCAGGATCAGCGAGAAGACCGTCGCCT
CCACGgtacgtcctccctccctccctccctccctccctccctccctcccc
ttctcccttcctccctccctcccctctccctccctcttttcctgcccccc
tctctgtgtgacacgacgcccaccaaccctccttccctccctccctccct
ccctccctccctccctccccccctccctcgtacagGGCGGCGCACTCTTC
CTGGTTTTCTGCCTCCACTCCCTGCTCGTGGGACCGTGACGAAAAGGAGG
GAGGGAGGGAGGGAGGGAGGGGTAGATAACTGCGTACTCTTCTTCTTATT
TTTAAATCGTAGTGGCAAGTCGAATTGTGTTGTGAAAGAAAAAGGAAGGG
AGGGAGGGAGGAAGGGAAAGAGGAAGGGAAGAAAAGAAACGTTGAGTGAT
GCAGCTAGAGCCACTACCACTGTACCAGCAGCAGCAGCAGCAGCAGCAGT
AGCACGACAAACACCACCAGCACAAAATGAGAGAAAGAGCAGCGACCGAA
GTAGCAGTAGTAGGGGTAGGAATGGTGAAGGGCACTTGAGCTTGTGACGA
TAAGAAAGTAGAACAGCAGCAGGAGCAGCAGGAGCAGCGGCAACAAAGAA
GATGAAATGTAGTAGAGCCATTTAGTCAAATATATGGGTTCGGTTCTTTG
TTTCGTTTCCCTCTCTCCTTCCCTCCCTCCCTTCCTCCCTTTCGCCTGCC
TCTTTGCCTAATGTCTTGCTTCCCCCCTCTTTCCCCCCACCCCCCTCCAC
CGATACAAAGTCGTTCTCCTCGTCGTCCTCCTCCTCCTCCTCCTACTCCT
CCACTCCACCTTTTCCCCTCTCTCTTCTTTTCCTCTCTCTTTTTTCTTCA
ACCCATCACACAAGTACACACTACACACCCCACCCGGACCCCTCCCGTCC
TCCCTCTCTCAAGTCCTCCCTCACTCCCTCCCTCCCTACTCATCTGAGCC
ATAGTCGTACTTAATCGAGTGACTCGCTAGGGAGATGGCACCCCCTCTGT
AGTTACCTCTCTTTTTCTTCGTCTTCTCGTGCCGGAAATCTTTCCCCCGT
ACCGTCATTAACTTTTCGCTGGCTTTCGCGCCATATCCACCGCTGCCGAA
CGTGCCAGCGTCTGAAGGAGGAAGGGGGGGAAGGAGGGAGGGAAGGTGAG
TGCCATCATTTCCTAGTGTCACGAGCTTCGAACGAAAGCCACTTAAAACC
CACAGTCCTTCCTTCCTCCCTCCCTACTCACAAGAGTTATCCTTCAACCG
CTCGTCCTTGATCTGCCCACCCCAATACACGTCATCCACCCGCCTGAACG
CCTCCCCCGGCGC
back to top

protein sequence of NO08G04240.1

>NO08G04240.1-protein ID=NO08G04240.1-protein|Name=NO08G04240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=395bp
MPRRRVTHSTSSLAPPPLSRSTSSSSWLSSSSTFSSKPRRSLCMGSLLVL
AVLLIGVITLISAENVLPDSGSGDGSVVFFRADNFGDDAYPALGEEGGKG
KRIEGAAEVMASDVDESGMPILGFWPAFFNSLSMILVTELGDKTFFIAAV
LAMRYDRLLIFGGAIGALILMTILSAAIGNVLPNVLPRKYTHYASAFLFL
YFGIKLLMEAQGMEGSGPSDELQEVEEELLHKKEDVCHSPHSTEMTHLEN
GSSSNNSSNNSGSCSEGGREGGREGGREERSGSPLGGGHGRQGSYHPQDS
RGKGGGGTKVFTQALTLTFLAEWGDRSQIATIALAAAKDPFGVTAGGILG
HSLCTGLAVVGGRMLAARISEKTVASTGGALFLVFCLHSLLVGP*
back to top

protein sequence of NO08G04240.2

>NO08G04240.2-protein ID=NO08G04240.2-protein|Name=NO08G04240.2|organism=Nannochloropsis oceanica|type=polypeptide|length=408bp
MPRRRVTHSTSSLAPPPLSRSTSSSSWLSSSSTFSSKPRRSLCMGSLLVL
AVLLIGVITLISAENVLPDSGSGDGSVVFFRADNFGDDAYPALGEEGGKG
KRIEGAAEVMASDVDESGMPILGFWPAFFNSLSMILVTELGDKTFFIAAV
LAMRYDRLLIFGGAIGALILMTILSAAIGNVLPNVLPRKYTHYASAFLFL
YFGIKLLMEAQGMEGSGPSDELQEVEEELLHKKEDVCHSPHSTEMTHLEN
GSSSNNSSNNSGSCSEGGREGGREGGREERSGSPLGGGHGRQGSYHPQDS
RGKGGGGTKVFTQVREGGREGRRGEERRGARGTRMVSVGKEGRDGGREKK
KQEDRRLIFPLPPSLPPFRPPSRPLSPRPSPSPFWPNGETALKSRRSPSL
LPRIPLV*
back to top
Synonyms
Publications