NO08G04180, NO08G04180 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G04180 vs. NCBI_GenBank
Match: EWM26881.1 (transmembrane protein [Nannochloropsis gaditana]) HSP 1 Score: 315.8 bits (808), Expect = 3.900e-82 Identity = 183/367 (49.86%), Postives = 229/367 (62.40%), Query Frame = 0 Query: 79 DEPKDS---CDDDDDDIGIWPDATNI----CQSAGASSSSSSRSSLPINYEFLTRTLDAGEDVEHINIEECNVRHAFRNLQRLICDERLLLAHTLLLKLDAYLLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNTDWVRIAMSHPNTRARLENLNRRVHACHEAFRLLASHDGWTYAQTHFGVTTHYRIEEDDGSLTVRLQGEVKGCSVFDQLAVLREADLYSLWAPFVRASSIVKELGKTSLVIWFQLVVPWLASRDACMHIFACDATEHGLLLLCGESVRSRSNGTDDKGGXXXXXXXXXXRPSSFGGELEGLVVPPLTPGWNSARMEVRSCYAQVKIAGPTTCYME 439 +EP S +DDD+D+ WPD ++ CQ +R+S INY F +R LDA DV+H+ + E NV+ AFRNLQ L+CDERLLLAHTL KL ++L NTD VR AM+HP TRARLE+L+RRV+AC EA L AS GW +AQ +FGV+THYR+ EDDG+LTVRL+ +++ CSVFD+LAVLREADLY LWAPFVRASS+V+E+GK LVIWFQ +VPWLASRDAC+HIFACDATE G+LLLCG+S+R XXXXXX + GL +PPL GWNSARMEVR C+ Q+++ GP C ++ Sbjct: 2 EEPSHSQTGVNDDDNDLNNWPDGGDLHNVECQ--------GNRNS--INYTFFSRNLDAVADVQHLTLTETNVQKAFRNLQCLVCDERLLLAHTLWHKLISFL---------------GVTEAGVAAPETGLSECSKGVFPSPSRISPPTPNTDSVRQAMAHPQTRARLESLDRRVNACVEALDLFASETGWVFAQKYFGVSTHYRM-EDDGTLTVRLRADLEECSVFDELAVLREADLYPLWAPFVRASSLVQEVGKCELVIWFQFLVPWLASRDACVHIFACDATERGVLLLCGQSIREGEGKGXXXXXXXXXXXAGGMEKVPLFDAIPGLNIPPLASGWNSARMEVRKCWCQIELLGPRACCVD 342
BLAST of NO08G04180 vs. NCBI_GenBank
Match: EWM27447.1 (transmembrane protein [Nannochloropsis gaditana]) HSP 1 Score: 183.3 bits (464), Expect = 3.000e-42 Identity = 121/420 (28.81%), Postives = 199/420 (47.38%), Query Frame = 0 Query: 130 AGEDVEHINIEECNVRHAFRNLQRLICDERLLLAHTLLLKLDAYLLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNTDWVRIAMSHPNTRARLENLNRRVHACHEAFRLLASHDGWTYAQTHFGVTTHYRIEEDDGSLTVRLQGEVKGCSVFDQLAVLREADLYSLWAPFVRASSIVKELGKTSLVIWFQLV---VPWLASRDACMHIFACDATEHGLLLLCGESVRSRSNGTDDKGGXXXXXXXXXXRPSSFGGELEGLVVPPLTPGWNSARMEVRSCYAQVKIAGPTTCYMEVIANVDPKLP-LPLSLLNFFTRKIAGMGLLLLQKQAIRIRRYPVSNPHAIRMRASRFYIDYFIPRVLSFCHARGWALPPSLVPAYDSPMVPQCEATEVWKEEKERMQA 546 A + + + + E NV+ A+R +Q L D RL LA LL K++A+ + +W M+ RLE L RRV C +A R + S D W A T G+ T R +E D +L R GE++ C V QLAVLREAD Y W P + S +VK LGK ++WF++ +P++ RDA +H++ CDA+E L++L G S+ +D+ E + V P WN AR++++ Q++I PT +++I +D K+ +P ++N+F++ + G + L ++ R++ PV +P A MR+ FY +Y +P L+ + +GW +PP VPA++ + C + + W++E + A Sbjct: 40 AANETQALQVGEENVQVAYRLVQLLDADTRLFLADDLLQKIEAFTRTGTGP------------------------------------------QAEWAMHVMARSEDSQRLEELRRRVQVCRQAARDMQSED-WELAHTEEGIQTFLRRDEGDNTLAWRTHGEIEDCPVVSQLAVLREADHYHDWIPLMDKSKVVKRLGKIEQMLWFRVAGRGLPFV--RDAVLHLYGCDASEEDLIILSGASI------PEDE-------------------ITESMGVRPPKKKWNHARVDIKYFSIQLRILSPTHTKIDLIYKLDVKIKFVPQKVINYFSKFLCGWVIWFLFQEMRRLQTDPVESPTAQLMRSEPFYANYLVPYCLNLAYTKGWEVPP--VPAFE--INKDCASAQAWRQEYHELLA 385
BLAST of NO08G04180 vs. NCBI_GenBank
Match: EJK43974.1 (hypothetical protein THAOC_37531, partial [Thalassiosira oceanica]) HSP 1 Score: 168.7 bits (426), Expect = 7.700e-38 Identity = 130/384 (33.85%), Postives = 188/384 (48.96%), Query Frame = 0 Query: 243 LNRRVHACHEAFRLLASHD-----------GWTYAQTHFGVTTHYRIEEDDGSLTVRLQGEVKGCSVFDQLAVLREADLYSLWAPFVRASSIVKELGKTSLVIWFQLVVPWLA-SRDACMHIFAC-----------------DATEHGLLLLCGESVRSRSNGTDDKGGXXXXXXXXXXRP------SSFGGE--LEGLVVPPLTPGWNSARMEVRSCYAQVKIAGPTTCYMEVIANVDPKLPL-PLSLLNFFTRKIAGMGLLLLQKQAIRIRRYPVSNPHAIRMRAS-RFYIDYFIPRVLSFCHARGWALPPSLVPAYDSPMVPQCEATEVWKEEKERMQALPPSL-ARLSVTWRSREGQGREGGPGGGKMSSFRAASLLSPM 587 L RR A L+ HD GW +AQT FGV+THYR E DGSL++R+ G++ G +F+QLA+LRE DLY WAPF +S + +LG+ + W+ + VP SRDAC C D EHG++ ++R G XXXXXX SS + L L +PP+ G RM +R+ A+V + GPT+ ++ NVDP L L P +L++F +K+ G+ L LQ A R+ + PV N HA RMR FY D+ +P+ ++C A+GW +PP V A++ W ++ + A + AR + S +GG G G SS +++ SPM Sbjct: 86 LRRRASLFLAAKETLSQHDKNDGEESDENTGWVHAQTLFGVSTHYR-RESDGSLSIRIAGDLVGVPLFEQLAILREVDLYHAWAPFCVSSRKLAQLGRLDVAAWYDVGVPIFGLSRDACYRAVGCDGMAEDGSVMIVAVGLNDTDEHGVVSSASLGKQTRKRGPSXXXXXXXXXXAEGLEATEGSLLSSLARDEILSTLEMPPVPSGAGRGRMTIRNFSAKVDVLGPTSARTIMVVNVDPNLQLIPQALIDFSMKKMCGILLSRLQASARRVLKDPVGNAHARRMREDVTFYRDWLLPKFRAYCEAKGWNMPP--VGAFEVSDEELRATGMGWIDDGQSSTADASFIGARTPHSRSSSRAATTDGGFGSG--SSSVTSAMSSPM 464
BLAST of NO08G04180 vs. NCBI_GenBank
Match: OEU22457.1 (hypothetical protein FRACYDRAFT_179309, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 161.4 bits (407), Expect = 1.200e-35 Identity = 102/269 (37.92%), Postives = 147/269 (54.65%), Query Frame = 0 Query: 240 LENLNRRVHACHEAFRLLASHDGWTYAQTHFGVTTHYRIEEDDGSLTVRLQGEVKGCSVFDQLAVLREADLYSLWAPFVRASSIVKELGKTSLVIWFQLVVPWLA-SRDACMHIFACDAT-EHGLLLLCGESVRSRSNGT--DDKGGXXXXXXXXXXRPSSFGGELEGLVVPPLTPGWNSARMEVRSCYAQVKIAGPTTCYMEVIANVDPKLP-LPLSLLNFFTRKIAGMGLLLLQKQAIRIRRYPVSNPHAIRMRA-SRFYIDYFIPR 503 L + R +A + L +D WT+AQT FGVTT+YR +E DGSL+++L+G V+ S+F+Q+AVLRE DL LWAPFV +S V L K V WF + +P RDAC CD+ E G +LL E + R DDK R L+ L +PP + RM +RS AQ+ I T+ +++AN+D LP +P LL+F +++ G+ L +Q A +I R P++N HAI+MR FY + +P+ Sbjct: 136 LNKMEDRCRLFEKAKKNLDVNDDWTHAQTMFGVTTYYR-KESDGSLSIKLEGTVEDASLFNQIAVLREIDLTYLWAPFVTSSMTVAHLDKLDTVGWFVVGLPHFGIMRDACFRAIGCDSMYEDGSVLLVAEGIADRPEDLDGDDKRDLNRTRIEDSLRTDPI---LDTLDLPPPPTRTGNGRMTIRSISAQIHIESATSSTTKIVANIDLNLPFIPPKLLDFIMKRMCGLILYKMQGAARKISRDPITNLHAIKMREDDDFYRRFLLPK 400
BLAST of NO08G04180 vs. NCBI_GenBank
Match: GAX11088.1 (hypothetical protein FisN_9Hh178 [Fistulifera solaris]) HSP 1 Score: 160.2 bits (404), Expect = 2.700e-35 Identity = 91/281 (32.38%), Postives = 151/281 (53.74%), Query Frame = 0 Query: 239 RLENLNRRVHACHEAFRLLASHDGWTYAQTHFGVTTHYRIEEDDGSLTVRLQGEVKGCSVFDQLAVLREADLYSLWAPFVRASSIVKELGKTSLVIWFQLVVPWLA-SRDACMHIFACD-ATEHGLLLLCGESVRSRSNGTDDKGGXXXXXXXXXXRPSSFGGELEGLVVPPLTPGWNSARMEVRSCYAQVKIAGPTTCYMEVIANVDPKLP-LPLSLLNFFTRKIAGMGLLLLQKQAIRIRRYPVSNPHAIRMRAS-RFYIDYFIPRVLSFCHARGWALP 516 +LEN++R + A + L + + WT+A HFG+TT+YR E+DGSL+V+L+GE+ G +F+Q+AVLR DL+ W PF +S I+ +LGK ++ WF + +P +RD C CD +E G +++ G+ + G P+ F L +PP + RM +R V I PT+ ++AN++P + L +++F + +AG+ L LQ A ++ + PV+N HA +MR FY + + + +FC +GW +P Sbjct: 109 KLENVSRIFYG---ALKNLNTDEDWTFASLHFGITTYYR-REEDGSLSVKLEGELTGVPLFEQIAVLRAGDLHYKWVPFCSSSMIIAQLGKLDIINWFMIGIPQFGLARDGCYRAIGCDNMSEDGSIIIAGQGINDIM-----PGDHPPEDPFLSNDPAVF-----ALNIPPAPTKRGNGRMTIRKFETVVNITSPTSAKTRIVANLNPNIAFLSQGIIDFALKHLAGVVLAKLQSAAKKVVKNPVTNHHAQQMREEPDFYQTWLMAKFKAFCDEKGWEMP 375
BLAST of NO08G04180 vs. NCBI_GenBank
Match: XP_002180706.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC48114.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 157.1 bits (396), Expect = 2.300e-34 Identity = 93/269 (34.57%), Postives = 138/269 (51.30%), Query Frame = 0 Query: 235 NTRARLENLNRRVHACHEAFRLLASHDGWTYAQTHFGVTTHYRIEEDDGSLTVRLQGEVKGCSVFDQLAVLREADLYSLWAPFVRASSIVKELGKTSLVIWFQLVVPWL-ASRDACMHIFACD-ATEHGLLLLCGESVRSRSNGTDDKGGXXXXXXXXXXRPSSFGGELEGLVVPPLTPGWNSARMEVRSCYAQVKIAGPTTCYMEVIANVDPKLP-LPLSLLNFFTRKIAGMGLLLLQKQAIRIRRYPVSNPHAIRMRASRFYIDYFI 501 + +A ++ L RV +A L D WTYA THFG+ T YR EED SL+V+L+GE++G +F+Q+ VL+E DL+ WAPF +S V +L K V WF + +P +RD C CD E G +LL G+ V R S L L +PP+ S RM +R + + + PT+ ++AN+DP + LP SLL F + +AG+ L LQ ++ + PVSN HA +MR + +++ Sbjct: 110 SNKAAIDKLENRVRIFRKALHNLNEDDEWTYASTHFGIKTFYRREEDQ-SLSVKLEGEIEGVPLFEQICVLKEVDLHYKWAPFCSSSMTVADLDKLDTVGWFMIGLPHFGVARDGCFRAIGCDNIIEDGSILLVGQGVHDRPPDAPPPEDPFL----------SEDPILNDLGIPPVPKRRGSGRMTIRKFESVIHVLSPTSAKTRIVANIDPNMAFLPQSLLEFLMKHLAGVMLAKLQAATKKVLKNPVSNEHARKMREHEDFYKHWL 367
BLAST of NO08G04180 vs. NCBI_GenBank
Match: CBJ32035.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 154.8 bits (390), Expect = 1.200e-33 Identity = 93/280 (33.21%), Postives = 141/280 (50.36%), Query Frame = 0 Query: 241 ENLNRRVHACHEAFRLLASHDGWTYAQTHFGVTTHYRIEEDDGSLTVRLQGEVKGCSVFDQLAVLREADLYSLWAPFVRASSIVKELGKTSLVIWFQLVVPWLASRDACMHIFACDAT-EHGLLLLCGESVRSRSNGTDDKGGXXXXXXXXXXRPSSFGGELEGLVVPPLTPGWNSARMEVRSCYAQVKIAGPTTCYMEVIANVDPKLPLPLSLLNFFTRKIAGMGLLLLQKQAIRIRRYPVSNPHAIRMRASR-FYIDYFIPRVLSFCHARGWALPPSL 519 + + +R C + S D W AQT G+TT Y++ + DGSL +++ G + +V DQLAV+RE DL++ W PF S ++K LG L+++F + +P + RD +H + CD+ E G +L+ G SV G V P GW ARM+VR+ A++++ PT+ ++ANVDPK P+P S++NF RK+AGM L L KQ + R N H R+ + FY + PR F +GW + L Sbjct: 74 DEVRQRAAECQSSLDDWQSPD-WLVAQTFMGITTFYKV-DPDGSLWIKMHGTMDDVTVMDQLAVVREVDLFNKWVPFCDTSKLLKRLGIVELLVYFSMSIPGV-GRDCVLHAYGCDSVLETGCILIQGRSVEEVPEG----------------------------VEVPQVKGWRHARMDVRAFRAKIEVLSPTSARTSIVANVDPKAPVPQSVVNFVVRKMAGMFLYCL-KQTAKCIRADEGNCHRRRIVEDKAFYKGWLFPRFERFYRRQGWTVDEEL 321
BLAST of NO08G04180 vs. NCBI_GenBank
Match: XP_002289596.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93133.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 153.3 bits (386), Expect = 3.300e-33 Identity = 101/329 (30.70%), Postives = 156/329 (47.42%), Query Frame = 0 Query: 257 LASHDGWTYAQTHFGVTTHYRIEEDDGSLTVRLQGEVKGCSVFDQLAVLREADLYSLWAPFVRASSIVKELGKTSLVIWFQLVVPWLA-SRDACMHIFACDA-TEHGLLLLCGESVR-SRSNGTDDK--------------GGXXXXXXXXXXRPSSFGGE-------------------------------------------LEGLVVPPLTPGWNSARMEVRSCYAQVKIAGPTTCYMEVIANVDPKLP-LPLSLLNFFTRKIAGMGLLLLQKQAIRIRRYPVSNPHAIRMRAS-RFYIDYFIPRVLSFCHARGWALPPSLVPAYD 524 L + W++AQT FG+TT+YR E D SL+++++GE+ G +F+Q+ VLRE DLY LWAPF S + +L K +V W+ + V + SRDAC CD E G +LL + S G D+ GG S+ G+ LE + +PP+ G RM +R+ A + + GP++ +++ NVDP L +P SL++F +++ G+ L LQ A ++ + P+ NPHA RMR FY D+ +P+ +C GW++PP V A+D Sbjct: 239 LTTSSNWSHAQTLFGITTYYR-RELDHSLSIKIEGELHGLPLFEQMVVLRECDLYHLWAPFCTKSRKLAQLDKLDVVAWYMVGVSLVGLSRDACYRAVGCDCMNEDGSVLLVAVGLNDSEEYGVKDELRVGNRDGKLVDGDGGDLDVELDDVGEHLSYVGDGNEQHQQQEKQKLYREERTASSKLSDSTLVDTTASSFLTRDAILETIEIPPIPQGMGRGRMTIRNFAAGIDVLGPSSARTKLVVNVDPNLHFIPQSLIDFCMKRMCGVLLSRLQATARKVVKDPIKNPHARRMREDVSFYRDWLLPKFRVYCDESGWSMPP--VKAFD 564
BLAST of NO08G04180 vs. NCBI_GenBank
Match: OQR94905.1 (transmembrane protein, partial [Thraustotheca clavata]) HSP 1 Score: 153.3 bits (386), Expect = 3.300e-33 Identity = 98/287 (34.15%), Postives = 156/287 (54.36%), Query Frame = 0 Query: 238 ARLENLNRRVHACHEAFR--LLASHDGWTYAQTHFGVTTHYRIEEDDGSLTVRLQGEVKGCSVFDQLAVLREADLYSLWAPFVRASSIVKELGKTSLVIWFQLVVPWLASRDACMHIFACDAT-EHGLLLLCGESVRSRSNGTDDKGGXXXXXXXXXXRPSSFGGELEGLVVPPLTPGWNSARMEVRSCYAQVKIAGPTTCYMEVIANVDPKLPLPLSLLNFFTRKIAGMGLLLLQKQAIRIRR----YPVSNPHAIRMRASRFYIDYFIPRVLS-FCHARGWALPP 517 + L + R H+A L + GW +AQT+FGV+TH++ DDG++ ++L G +G +F+ LAV+RE DL+ LWAPF S ++ LG+ L+ + L +P L RDA +H F +AT EH ++L G+S+ T+D+ + L PP+ GWN+ RM++R+ A ++ G ++ NV PK P+P++LLNF +K+AG+ L LL ++A +I + + +N HA R+R FY+ + PR+ F H LPP Sbjct: 489 SELSQVKERSAMGHQALHEFNLDADAGWRFAQTYFGVSTHWK-PGDDGTIWLKLDGICEGVDIFNALAVIRETDLFHLWAPFCNRSELLANLGRVELIAYMSLAIP-LMQRDAIVHAFGINATYEHRCIVLLGKSI------TEDQ------------------CPVNNLEFPPI-KGWNADRMDLRAFRALIEPYGRNRARTCIVVNVHPKCPVPMTLLNFTIKKMAGILLYLLMREAGKIEKHKNEHDPTNEHAKRIRNDPFYL-WLHPRMQKWFEHLEAGTLPP 747
BLAST of NO08G04180 vs. NCBI_GenBank
Match: XP_008614367.1 (hypothetical protein SDRG_10166 [Saprolegnia diclina VS20] >EQC32426.1 hypothetical protein SDRG_10166 [Saprolegnia diclina VS20]) HSP 1 Score: 152.9 bits (385), Expect = 4.400e-33 Identity = 92/260 (35.38%), Postives = 148/260 (56.92%), Query Frame = 0 Query: 241 ENLNRRVHACHEAFRLLASHDGWTYAQTHFGVTTHYRIEEDDGSLTVRLQGEVKGCSVFDQLAVLREADLYSLWAPFVRASSIVKELGKTSLVIWFQLVVPWLASRDACMHIFACDAT-EHGLLLLCGESVRSRSNGTDDKGGXXXXXXXXXXRPSSFGGELEGLVVPPLTPGWNSARMEVRSCYAQVKIAGPTTCYMEVIANVDPKLPLPLSLLNFFTRKIAGMGLLLLQKQAIRIRRYP----VSNPHAIRMRASRFY 496 E + +HA HE F A GW +AQT+FGV+TH++ DDG++ ++L G +G +F+ LAV+RE DL++LWAPF SS++ LG+ L+ + + +P L RDA +H F +AT EH ++L G+S+ T+D+ + + PP+ GWN+ RME+R+ A V+ ++ NV PK P+P+SLLNF +K+AG+ L LL ++A ++ ++ +NPH +R++ FY Sbjct: 596 ERCAQGMHALHE-FNADAD-AGWRFAQTYFGVSTHWK-PGDDGTIWLKLDGICEGVDIFNALAVVRETDLFNLWAPFCNKSSLLATLGRVELITYLSVAIP-LMQRDAVVHAFGINATYEHRCVVLLGKSI------TEDQ------------------SPVNNIEFPPV-KGWNADRMELRAFRALVEPYARNRGRTCIVVNVHPKCPVPMSLLNFTIKKMAGVLLYLLMREAAKVEKHTNEPGTTNPHVLRIQNDPFY 826 The following BLAST results are available for this feature:
BLAST of NO08G04180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G04180 ID=NO08G04180|Name=NO08G04180|organism=Nannochloropsis oceanica|type=gene|length=3387bpback to top protein sequence of NO08G04180.1 >NO08G04180.1-protein ID=NO08G04180.1-protein|Name=NO08G04180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=840bpback to top Synonyms
Publications
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