NO08G03760, NO08G03760 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO08G03760
Unique Name	NO08G03760
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2292
Alignment location	chr8:1057935..1060226 +

Link to JBrowse

Properties


Property Name	Value
Description	Ubiquitin family

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr8	genome	chr8:1057935..1060226 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR029071	Ubiquitin-rel_dom
IPR025390	DUF2407_C
IPR000626	Ubiquitin-like

Vocabulary: **Biological Process**
Term	Definition
GO:0042221	response to chemical
GO:0019538	protein metabolic process
GO:0009987	cellular process
GO:0009056	catabolic process
GO:0006950	response to stress

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Homology

[Close]

BLAST of NO08G03760 vs. NCBI_GenBank
Match: EWM26843.1 (ubiquitin family [Nannochloropsis gaditana])

HSP 1 Score: 365.2 bits (936), Expect = 3.100e-97
Identity = 196/277 (70.76%), Postives = 221/277 (79.78%), Query Frame = 0

Query:  148 EGLVSLRVKTLDSKEHVFEVNTNTLTVSEFKSLLFRTLPGAEGKFLRLITQGKMLIPDTALLNSFKLLDQTVVHCVLSDQPPRAHIGHIGIDVDGGGGREEGQVAYPEVNDDPVLRRGLDRLRTHGFSIQEVAALRSYFNAQVLAYAARQPSREG---ESVEERRNRMEEEWMGRQGEGSEFALNTNRVVATRAVXXXXXXXXXXXXXXXXLGAGTSREFVYGFIMXXXXXFISLFWLWNIPQTHTQKMGIILGVSCSLGWNIIRRAEMEGGT-EGG 421
            E L+SLR+KTLDSKEH+ EV+ + LTVSE KS L R+LPGAEGKFLRLITQGK+L PDTA L SF++ D+ VVHCV SDQPPRA   HI +D++ G G   G+V YP+VNDDP  RRG DRLRTHGFSIQEVAALRSYFNAQV+AYAA + + EG   E+ E+RR RME+EWMGRQGE SEFALNTNRVVATRAV                +G GTSR+F+YGFIM XXX FISLFWLWN+PQTHTQKMGIILGVSCSLGWNIIRRAEMEG T EGG
Sbjct:  169 EKLISLRIKTLDSKEHLMEVDASCLTVSELKSKLSRSLPGAEGKFLRLITQGKLLTPDTASLESFRISDRAVVHCVFSDQPPRA---HIRVDLERGAG--SGEVEYPDVNDDPAQRRGFDRLRTHGFSIQEVAALRSYFNAQVVAYAASREAEEGPDAETAEDRRLRMEDEWMGRQGEESEFALNTNRVVATRAV-FAARRGGMEDGRGLEMGTGTSRDFLYGFIMGXXXGFISLFWLWNVPQTHTQKMGIILGVSCSLGWNIIRRAEMEGETAEGG 439

[Close]

BLAST of NO08G03760 vs. NCBI_GenBank
Match: XP_009517257.1 (hypothetical protein PHYSODRAFT_538135 [Phytophthora sojae] >EGZ29982.1 hypothetical protein PHYSODRAFT_538135 [Phytophthora sojae])

HSP 1 Score: 144.1 bits (362), Expect = 1.100e-30
Identity = 104/265 (39.25%), Postives = 140/265 (52.83%), Query Frame = 0

Query:  149 GLVSLRVKTLDSKEHVFEVNTNTLTVSEFKSLLFRTLPGAEGKFLRLITQGKMLIPDTALLNSFKLLDQTVVHCVLSDQPPRAHIGHIGIDVDGGGGREEGQVAYPEVNDDPVLRRGLDRLRTHGFSIQEVAALRSYFNAQVLAYAARQPSREGESVEERRNRMEEEWMGRQGEGSEFALNTNRVVATR--AVXXXXXXXXXXXXXXXXLGAGTSREFVYGFIMXXXXXFISLFWLWNIPQTHTQKMGIILGVSCSLGWNIIRRA 412
            G + L++KTL  K    EV  ++ +V E K L+ +    AEGKFLRLI QGKML  D A L S K+ ++  +HC +S  PP+A +  +            G  + PE  DDP  RRG DRLR    S +E+ ALR YF  Q+  Y ++     GES E+R  R+EEEWM  QG  SEFALN   VV T   A+                   GT  EF++GF+M XXXX   L  L +      QK+G++LGVS +   +++ RA
Sbjct:   35 GRIVLKIKTLSEKPLRVEVAPSS-SVGELKELV-KKKANAEGKFLRLIHQGKMLSDDKATLESCKVKNEDFIHCAISSAPPKAVVNQMA---------AAGTDSDPEERDDPATRRGFDRLRDR-LSREEIQALRLYFYPQLSVYISQAARVPGESSEDRIYRLEEEWMASQGPQSEFALN---VVPTARIAMDTQIDMNGMNNSILAADNEGTGTEFLWGFLMGXXXXVFMLLMLLDRSVPRKQKVGLLLGVSMNFFLSVVPRA 284

[Close]

BLAST of NO08G03760 vs. NCBI_GenBank
Match: GAX96567.1 (ubiquitin family protein, putative [Pythium insidiosum])

HSP 1 Score: 141.4 bits (355), Expect = 7.400e-30
Identity = 100/259 (38.61%), Postives = 136/259 (52.51%), Query Frame = 0

Query:  153 LRVKTLDSKEHVFEVNTNTLTVSEFKSLLFRTLPGAEGKFLRLITQGKMLIPDTALLNSFKLLDQTVVHCVLSDQPPRAHIGHIGIDVDGGGGREEGQVAYPEVNDDPVLRRGLDRLRTHGFSIQEVAALRSYFNAQVLAYAARQPSREGESVEERRNRMEEEWMGRQGEGSEFALNTNRVVATRAVXXXXXXXXXXXXXXXXLGAGTSREFVYGFIMXXXXXFISLFWLWNIPQTHTQKMGIILGVSCSLGWNIIRRA 412
            L+VKT+  K  V E+   T TV E K ++ +    AEGKFLRLI QGKML  D A L S+K+  +  +HC +S  PP+A +  +  D +            PE  +DP  RRG DRLR    S +EV ALR Y    +  Y ++     GES E+R  R+EEEWM  QG  SEFALN   VV T  +                   GT  EF++GF+MXXXXX   L  L +      QK+G++LGVS +   +++ ++
Sbjct:   48 LKVKTMTEKPIVVEI-VATATVGELKEIV-KKQTNAEGKFLRLIHQGKMLSDDKATLESYKIKSEDFIHCAISAAPPKAVVNQMSADQE------------PEEREDPSRRRGFDRLRDR-LSREEVQALRLYXYPXLSLYISQAERVPGESSEDRIYRLEEEWMASQGPHSEFALN---VVPTARIAMDQMDANVDSSILAADNEGTGTEFLWGFLMXXXXXXFMLLMLLDRSVPRKQKIGLLLGVSMNFFLSVVPKS 288

[Close]

BLAST of NO08G03760 vs. NCBI_GenBank
Match: POM66723.1 (Ubiquitin family protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 141.4 bits (355), Expect = 7.400e-30
Identity = 103/265 (38.87%), Postives = 137/265 (51.70%), Query Frame = 0

Query:  149 GLVSLRVKTLDSKEHVFEVNTNTLTVSEFKSLLFRTLPGAEGKFLRLITQGKMLIPDTALLNSFKLLDQTVVHCVLSDQPPRAHIGHIGIDVDGGGGREEGQVAYPEVNDDPVLRRGLDRLRTHGFSIQEVAALRSYFNAQVLAYAARQPSREGESVEERRNRMEEEWMGRQGEGSEFALNTNRVVATR--AVXXXXXXXXXXXXXXXXLGAGTSREFVYGFIMXXXXXFISLFWLWNIPQTHTQKMGIILGVSCSLGWNIIRRA 412
            G + L+VKTL  K    E+   + TV E K L+ +    AEGKFLRLI QGKML  D   L S K+ ++  +HC +S  PP+A +  +               + PE  DDP  RRG DRLR    S +E+ ALR YF  Q+  Y ++     GES E+R  R+EEEWM  QG  SEFALN   VV T   A+                   GT  EF++GF+M XXXX   L  L +      QK+G++LGVS +   +++ RA
Sbjct:   32 GKIVLKVKTLSEKPLRVEI-APSATVGELKDLV-KKKANAEGKFLRLIHQGKMLSDDKVTLESCKVKNEDFIHCAISSAPPKAVVNQMAT-----------TESEPEERDDPSARRGFDRLRDR-LSREEIQALRLYFYPQLSVYISQAERIPGESSEDRIYRLEEEWMASQGPQSEFALN---VVPTARIAMDTQIDMNGMNNSILAADNEGTGTEFLWGFLMGXXXXVFMLLMLLDRSVPRKQKVGLLLGVSMNFFLSVVPRA 279

[Close]

BLAST of NO08G03760 vs. NCBI_GenBank
Match: XP_024574946.1 (ubiquitin family [Plasmopara halstedii] >CEG38577.1 ubiquitin family [Plasmopara halstedii])

HSP 1 Score: 140.6 bits (353), Expect = 1.300e-29
Identity = 103/265 (38.87%), Postives = 137/265 (51.70%), Query Frame = 0

Query:  149 GLVSLRVKTLDSKEHVFEVNTNTLTVSEFKSLLFRTLPGAEGKFLRLITQGKMLIPDTALLNSFKLLDQTVVHCVLSDQPPRAHIGHIGIDVDGGGGREEGQVAYPEVNDDPVLRRGLDRLRTHGFSIQEVAALRSYFNAQVLAYAARQPSREGESVEERRNRMEEEWMGRQGEGSEFALNTNRVVATRAVXXXXXXXXXXXXXXXXL--GAGTSREFVYGFIMXXXXXFISLFWLWNIPQTHTQKMGIILGVSCSLGWNIIRRA 412
            G++ L+VKTL  K    E+  ++ +V+E K L+ + +  AEGKFLRLI QGKML  D A L S K+ D   VHC +S  PP+A I  +                  E  DD   RRG DRLR    S +E+ ALR YF  Q+  + +R     GES E+R  R+EEEWM  QG  SEFALN   VV T  +                     GT  EF++GF+M XXXX   L  L +      QK+G++LGVS +   +++ RA
Sbjct:   31 GIIVLKVKTLSEKPLRVEI-VHSASVAELKELVKKKV-NAEGKFLRLIHQGKMLSDDKATLESCKVKDDDFVHCAISAAPPKAIINQVA-----------STAIELEEQDDETTRRGFDRLRDR-LSREEIQALRLYFYPQLSVFISRAERIHGESSEDRIYRLEEEWMASQGPQSEFALN---VVPTARIATDTQIDINGMSNSILAADNEGTGTEFLWGFLMGXXXXVFMLLMLLDRSVPRKQKVGLLLGVSMNFFLSVVPRA 278

[Close]

BLAST of NO08G03760 vs. NCBI_GenBank
Match: XP_008897204.1 (hypothetical protein PPTG_05412 [Phytophthora parasitica INRA-310] >ETI34108.1 hypothetical protein F443_19315 [Phytophthora parasitica P1569] >ETK74475.1 hypothetical protein L915_18739 [Phytophthora parasitica] >ETL27900.1 hypothetical protein L916_18641 [Phytophthora parasitica] >ETL81144.1 hypothetical protein L917_18466 [Phytophthora parasitica] >ETM34345.1 hypothetical protein L914_18554 [Phytophthora parasitica] >ETN17665.1 hypothetical protein PPTG_05412 [Phytophthora parasitica INRA-310] >ETO62917.1 hypothetical protein F444_19266 [Phytophthora parasitica P1976] >ETP04000.1 hypothetical protein F441_19135 [Phytophthora parasitica CJ01A1] >ETP32154.1 hypothetical protein F442_19090 [Phytophthora parasitica P10297] >KUF96708.1 hypothetical protein AM587_10006983 [Phytophthora nicotianae])

HSP 1 Score: 139.8 bits (351), Expect = 2.100e-29
Identity = 104/265 (39.25%), Postives = 137/265 (51.70%), Query Frame = 0

Query:  149 GLVSLRVKTLDSKEHVFEVNTNTLTVSEFKSLLFRTLPGAEGKFLRLITQGKMLIPDTALLNSFKLLDQTVVHCVLSDQPPRAHIGHIGIDVDGGGGREEGQVAYPEVNDDPVLRRGLDRLRTHGFSIQEVAALRSYFNAQVLAYAARQPSREGESVEERRNRMEEEWMGRQGEGSEFALNTNRVVATR--AVXXXXXXXXXXXXXXXXLGAGTSREFVYGFIMXXXXXFISLFWLWNIPQTHTQKMGIILGVSCSLGWNIIRRA 412
            G + L+VKTL  K    E+  +  TV E K L+ +    AEGKFLRLI QGKML  D A L S K+  +  VHC +S  PP+A +  +               + PE  DDP  RRG DRLR    S +E+ ALR YF  Q+  + ++     GES E+R  R+EEEWM  QG  SEFALN   VV T   A+                   GT  EF++GF+M XXXX   L  L +      QK+G++LGVS +   +++ RA
Sbjct:   32 GKLVLKVKTLSEKPLRVEIFPSA-TVGELKELV-KKKANAEGKFLRLIHQGKMLSDDKATLESCKVKSEDFVHCAISSAPPKAVVNQMA-----------ATDSEPEERDDPSTRRGFDRLRDR-LSREEIQALRLYFYPQLSVFISQAERVPGESSEDRIYRLEEEWMASQGPQSEFALN---VVPTARIAMDAQIDMNGMNNSILAADNEGTGTEFLWGFLMGXXXXVFMLLMLLDRSVPRKQKVGLLLGVSMNFFLSVVPRA 279

[Close]

BLAST of NO08G03760 vs. NCBI_GenBank
Match: XP_002907569.1 (ubiquitin family protein, putative [Phytophthora infestans T30-4] >EEY64133.1 ubiquitin family protein, putative [Phytophthora infestans T30-4])

HSP 1 Score: 139.4 bits (350), Expect = 2.800e-29
Identity = 103/263 (39.16%), Postives = 136/263 (51.71%), Query Frame = 0

Query:  151 VSLRVKTLDSKEHVFEVNTNTLTVSEFKSLLFRTLPGAEGKFLRLITQGKMLIPDTALLNSFKLLDQTVVHCVLSDQPPRAHIGHIGIDVDGGGGREEGQVAYPEVNDDPVLRRGLDRLRTHGFSIQEVAALRSYFNAQVLAYAARQPSREGESVEERRNRMEEEWMGRQGEGSEFALNTNRVVATR--AVXXXXXXXXXXXXXXXXLGAGTSREFVYGFIMXXXXXFISLFWLWNIPQTHTQKMGIILGVSCSLGWNIIRRA 412
            + L+VKTL  K    E+  +  TV E K ++ +    AEGKFLRLI QGKML  D A L S K+  +  VHC +S  PP+A +  +               + PE  DDP  RRG DRLR    S +E+ ALR YF  Q+  Y ++     GES E+R  R+EEEWM  QG  SEFALN   VV T   A+                   GT  EF++GF+M XXXX   L  L +      QK+G++LGVS +   +++ RA
Sbjct:   34 IVLKVKTLSEKPLRVEIFPSA-TVGELKEIV-KKKANAEGKFLRLIHQGKMLSDDKATLESCKVKTEDFVHCAISSAPPKAVVNQMA-----------ATDSEPEERDDPSTRRGFDRLRDR-LSREEIQALRLYFYPQLSVYISQAERVPGESSEDRIYRLEEEWMASQGPQSEFALN---VVPTARIAMDAQIDMNGMNNSILAADNEGTGTEFLWGFLMGXXXXVFMLLMLLDRSVPRKQKVGLLLGVSMNFFLSVVPRA 279

[Close]

BLAST of NO08G03760 vs. NCBI_GenBank
Match: XP_009821813.1 (hypothetical protein H257_00704 [Aphanomyces astaci] >ETV89413.1 hypothetical protein H257_00704 [Aphanomyces astaci])

HSP 1 Score: 139.0 bits (349), Expect = 3.700e-29
Identity = 96/267 (35.96%), Postives = 136/267 (50.94%), Query Frame = 0

Query:  150 LVSLRVKTLDSKEHVFEVNTNTLTVSEFKSLLFRTLPGAEGKFLRLITQGKMLIPDTALLNSFKLLDQTVVHCVLSDQPPRAHIGHIGIDVDGGGGREEGQVAYPEVNDDPVLRRGLDRLRTHGFSIQEVAALRSYFNAQVLAYAARQPSREGESVEERRNRMEEEWMGRQGEGSEFALNTNRVVATRAVXXXXXXXXXXXXXXXXLGAGTSREFVYGFIMXXXXXFISLFWLWNIPQTHTQKMGIILGVSCSLGWNIIRRAEMEGG 417
            +++LRVKTL  K    +++  T +V E K ++ +    AEGKFLRLI QGKML  D A L S  +     +HC +S+ PP++ +  +         +EE  +      D+P  RRG D LR    S ++V ALR +F  QV    ++  +REGESVE+R  R+EEEWM  QG  SEFALN         +                   GT+ + V+G  M     F  LF LW       QK+GI++GV+ +L  N ++R   EGG
Sbjct:   30 ILNLRVKTLSEKPLNIDISA-TASVGELKDMI-KAKGEAEGKFLRLIHQGKMLNDDKAALLSCNIKQNDFIHCAMSNAPPKSLVQQMTHQ------QEEAAL------DEPTHRRGFDCLR-DTLSREDVQALRLHFYPQVSTMISQSVAREGESVEDRIYRIEEEWMAAQGPQSEFALNVRPRGGPMTIHDSAHHRIDMPDMSSVDNEGTTVDMVWGVAMGFVLGFFMLFLLWERTIPRRQKLGIVIGVAINLLLNFMQRLTPEGG 281

[Close]

BLAST of NO08G03760 vs. NCBI_GenBank
Match: XP_008862367.1 (hypothetical protein H310_01118 [Aphanomyces invadans] >XP_008862369.1 hypothetical protein, variant 1 [Aphanomyces invadans] >ETW08562.1 hypothetical protein H310_01118 [Aphanomyces invadans] >ETW08563.1 hypothetical protein, variant 1 [Aphanomyces invadans])

HSP 1 Score: 137.5 bits (345), Expect = 1.100e-28
Identity = 97/268 (36.19%), Postives = 140/268 (52.24%), Query Frame = 0

Query:  150 LVSLRVKTLDSKEHVFEVNTNTLTVSEFKSLLFRTLPGAEGKFLRLITQGKMLIPDTALLNSFKLLDQTVVHCVLSDQPPRAHIGHIGIDVDGGGGREEGQVAYPEVNDDPVLRRGLDRLRTHGFSIQEVAALRSYFNAQVLAYAARQPSREGESVEERRNRMEEEWMGRQGEGSEFALNTNRVVATRAVXXXXXXXXXXXXXXXXL--GAGTSREFVYGFIMXXXXXFISLFWLWNIPQTHTQKMGIILGVSCSLGWNIIRRAEMEG 416
            +++LRVKTL  K    ++N  T TV + K ++ +T   AEGKFLRLI QGK+L  D A+L S  + +   +HC +S  PP++ +  +          ++  VA    +D+P  RRG D LR    + +EV ALR +F  QV A  ++  +REGESVE+R  R+EEEWM  QG  SEFALN         +                L    GT+ + ++G  M     F  LF LW       QK+GI++GV+ +L  N ++R   EG
Sbjct:   30 MLTLRVKTLSEKPLNIDINA-TATVGDLKDMI-KTKGHAEGKFLRLIHQGKLLNDDKAVLLSSNVKNNDFIHCAMSSVPPKSLVQQM--------THQQDDVA----SDEPNHRRGFDCLR-DTLTREEVQALRLHFYPQVSAMISQSVAREGESVEDRIYRVEEEWMAAQGPQSEFALNVRPRGGHITMESFHDSIHRIDMPDMPLIDNEGTTVDMIWGVAMGLILGFFMLFLLWERSIPRRQKLGIVVGVAINLLLNFMQRLTPEG 282

[Close]

BLAST of NO08G03760 vs. NCBI_GenBank
Match: OQR99088.1 (ubiquitin family protein [Achlya hypogyna])

HSP 1 Score: 129.0 bits (323), Expect = 3.800e-26
Identity = 98/267 (36.70%), Postives = 126/267 (47.19%), Query Frame = 0

Query:  148 EGLVSLRVKTLDSKEHVFEVNTNTLTVSEFKSLLFRTLPGAEGKFLRLITQGKMLIPDTALLNSFKLLDQTVVHCVLSDQPPRAHIGHIGIDVDGGGGREEGQVAYPEVNDDPVLRRGLDRLRTHGFSIQEVAALRSYFNAQVLAYAARQPSREGESVEERRNRMEEEWMGRQGEGSEFALNT---NRVVATRA-VXXXXXXXXXXXXXXXXLGAGTSREFVYGFIMXXXXXFISLFWLWNIPQTHTQKMGIILGVSCSLGWNIIRR 411
            E L+SLRVKTL  K    E+  +T T+  FK L+ +    AEGKFLRLI QGKML  DTA L +  +     +HC +S  PP+  +              E              RRG D LR    S +EV ALR YF  QV A   +   REGES E+R  R+EEEWM  QG  SEFALN    +  ++TRA                     GT  + ++G  M     F  LF LW       QK+GI++G    L  N+++R
Sbjct:   27 EVLLSLRVKTLSEKPLTIELPAST-TIGAFKELI-KEKADAEGKFLRLIHQGKMLSDDTATLLACHVKTNDFIHCAMSAAPPKCVVQXXXXXXXXXATASEN-------------RRGFDCLRDR-LSREEVQALRLYFYPQVSAMINQSQPREGESAEDRIYRIEEEWMASQGPQSEFALNVRPRSGSLSTRANFDTQHRIDMPELALMGGDNEGTQVDMIWGIAMGLILGFFMLFLLWERTIPRRQKVGIVMGXXXXLMLNVVQR 277

The following BLAST results are available for this feature:

BLAST of NO08G03760 vs. NCBI_GenBank

BLAST of NO08G03760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM26843.1	3.100e-97	70.76	ubiquitin family [Nannochloropsis gaditana]	[more]
XP_009517257.1	1.100e-30	39.25	hypothetical protein PHYSODRAFT_538135 [Phytophtho...	[more]
GAX96567.1	7.400e-30	38.61	ubiquitin family protein, putative [Pythium insidi...	[more]
POM66723.1	7.400e-30	38.87	Ubiquitin family protein [Phytophthora palmivora v...	[more]
XP_024574946.1	1.300e-29	38.87	ubiquitin family [Plasmopara halstedii] >CEG38577....	[more]
XP_008897204.1	2.100e-29	39.25	hypothetical protein PPTG_05412 [Phytophthora para...	[more]
XP_002907569.1	2.800e-29	39.16	ubiquitin family protein, putative [Phytophthora i...	[more]
XP_009821813.1	3.700e-29	35.96	hypothetical protein H257_00704 [Aphanomyces astac...	[more]
XP_008862367.1	1.100e-28	36.19	hypothetical protein H310_01118 [Aphanomyces invad...	[more]
OQR99088.1	3.800e-26	36.70	ubiquitin family protein [Achlya hypogyna]	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL109	nonsL109	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR083	ncniR083	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR141	ngnoR141	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK008629	NSK008629	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO08G03760.1	NO08G03760.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|669629	gene_3709	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100263g2	gene3696	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO08G03760.1	NO08G03760.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO08G03760 ID=NO08G03760|Name=NO08G03760|organism=Nannochloropsis oceanica|type=gene|length=2292bp
GGAAGTGTGAGACATGATTGGGTCATATGAAGGCAAATAAGGGCTTGAGG
ATTGACGCACGATGACGCCAGGCGCTGGCGACGGTAAATCCTCGTACTTC
CAATATGTCTTGTTTTGCTTTCACGATCACATCAGCACCAGCACCACATT
GACAGCGCAACTAAAGTTAGAAAAAGTCTTGGTGGAGAGAGGGGAAAGAG
AGGCCGTTGATGCGTCAGCGGCCGGATCTTGGACAAAAAGCACTCTAAGA
CTCAAACTAAGCAGCTAGACATGGTGTCTGCAAACGTCTCAGCTGTGACT
TATGCACACCACCTCATTTTCGCTCTCTGAATCTCTTCTTACTCTCCCCC
AATCCACAGGCCGCGACAGTCATTTTGTCCGCACTGCGTTAACGCGCGTG
TCGTGGGTCCTTCCTATCCCCCGCCAACTTGCCCTTGAACTATCCCACCA
GCGCGCGCCCCATCCCTTACTGCGTCATGGCCACCGATCCCCTGAATACC
AGCGGGAGCAGCAGCACCAGCAGTCCTCGCACACCAGGTAGCGAGGGTAT
AGATGGGTCGGACTCAAGCGAGACGACGGGACTCTTATTAGGGGGACCTG
TGAGCAGAAGTGGCAGCAGCAGGAGTAGCAGCCGAACGTCCCGGACAAGT
AGTCGCAATACGCCGCCTCCTCCTCCCCCTCCTCCTCCCTCGACAGCATC
ATCATCGTCGTTGCGTTCGACTCCCCCTCCTCCTCCACAGCCGCTGCCAC
CACAATCGGAAGGAGCTGCTTCCTCCTCGTCTTCCTCCTCACTCTCCATC
AACATAACTAACACCAGCCTCTCCGGAAGCGGCCGAGGTGAAGCCACGAA
TCAAGCCCAAAGCACCACCACAAGCGCGACCATGGCTGCCTCTCCAGCTC
CCCTAAGAGAAAGAGAAGAAGGCCTCGTCTCCCTGCGTGTCAAGACGCTC
GACTCCAAAGAACACGTCTTCGAAGTGAATACCAACACGCTCACCGTCTC
TGAGTTCAAGTCCCTGCTCTTCCGTACCTTACCTGGGGCGGAGGGTAAGT
TTCTTCGCCTCATCACACAGGGCAAGATGTTGATACCTGATACGGCGTTG
CTTAATTCCTTCAAATTACTGGACCAGACGGTCGTCCACTGTGTCTTGTC
CGACCAGCCCCCCCGCGCCCACATTGGGCACATAGGGATTGACGTTGATG
GAGGAGGAGGGAGGGAGGAAGGACAAGTGGCCTATCCCGAGGTCAATGAC
GATCCGGTATTGAGGAGGGGGCTTGATAGACTTAGGACACACGGATTTTC
GATACAAGAGGTGGCGGCGTTAAGGTCTTATTTTAATGCGCAGGTGCTAG
CGTATGCGGCCCGCCAGCCGTCGAGGGAGGGGGAGTCAGTAGAGGAGAGG
AGGAATAGGATGGAGGAGGAGTGGATGGGCAGGCAGGGTGAGGGGAGTGA
GTTTGCGTTGAACACGAATAGGGTGGTGGCGACACGGGCGGTGTTTGCAG
CAGCTAGGAGGGGAGGAGGGGGGGAGGGAGGGGGGGGAGAGCTGGGCGCG
GGGACGTCGAGGGAGTTTGTTTATGGATTTATAATGgtacgtcggagttt
aggaaataggagggggggattctacttgtgaatgagacgtcaaggtttga
gtgtgtatttactcttgctttcatctttgtcacgacgcgcctgactgact
atagagcccttgtcctcactcatcttcttcctctttaccctcttggccac
agGGCTTTGCGCTCGGCTTCATCTCCCTGTTTTGGTTGTGGAACATTCCT
CAGACGCATACCCAAAAGATGGGCATCATTTTAGGCGTCTCTTGCTCCCT
CGGATGGAACATAATTCGAAGGGCGGAGATGGAGGGAGGGACGGAGGGAG
GAGCGGGAAGCGGAGGAGGGAATGAGTTGCCGTCGACCTTTGGAAATGGG
GGTGGAGGGGTGGACACGGCGGGTGCTGCTTCTGCTGCTGCTGCTGCTGC
TGCTGCTGCTGGGACAGGAGTACCGCCGGCGACAGTGGGCGTGGGACAAT
GAGGGAGGGAAGGAGTGAGCGAGGAAGGGAGGAAAGGAGGGTTTGTGTAT
ATAATTAGAAAGAGAGTAATGATAGGGGTGGTCTTTTCTTTTGCTCTAAC
AAACGTTGAGAGGAGAGGGCGGGGAGAGGCTGAGCAATAAGAAAGAGGGA
GGGAAAGAGGGGAAGGAGTAGGTGAGTGTAATAAATATTGCACATCAACA
ACATGGCCAACCATTAAATCAATCTAGAGATTGCCAGGGCGC

protein sequence of NO08G03760.1

>NO08G03760.1-protein ID=NO08G03760.1-protein|Name=NO08G03760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=470bp
MATDPLNTSGSSSTSSPRTPGSEGIDGSDSSETTGLLLGGPVSRSGSSRS
SSRTSRTSSRNTPPPPPPPPPSTASSSSLRSTPPPPPQPLPPQSEGAASS
SSSSSLSINITNTSLSGSGRGEATNQAQSTTTSATMAASPAPLREREEGL
VSLRVKTLDSKEHVFEVNTNTLTVSEFKSLLFRTLPGAEGKFLRLITQGK
MLIPDTALLNSFKLLDQTVVHCVLSDQPPRAHIGHIGIDVDGGGGREEGQ
VAYPEVNDDPVLRRGLDRLRTHGFSIQEVAALRSYFNAQVLAYAARQPSR
EGESVEERRNRMEEEWMGRQGEGSEFALNTNRVVATRAVFAAARRGGGGE
GGGGELGAGTSREFVYGFIMGFALGFISLFWLWNIPQTHTQKMGIILGVS
CSLGWNIIRRAEMEGGTEGGAGSGGGNELPSTFGNGGGGVDTAGAASAAA
AAAAAAGTGVPPATVGVGQ*

Synonyms

Publications