NO08G03380, NO08G03380 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G03380 vs. NCBI_GenBank
Match: EWM26817.1 (Pectin lyase fold/virulence factor [Nannochloropsis gaditana]) HSP 1 Score: 273.1 bits (697), Expect = 1.300e-69 Identity = 131/206 (63.59%), Postives = 159/206 (77.18%), Query Frame = 0 Query: 166 ADGQGIIEEEMEE--NFIAIHGCTPQTGPQLRLLVETTECSVITLMPGMKYVLDDEIIVRRPVVIMGRPLSPPIIDAHFIYRAFLVEEGGKLDLRFVEAWRGVPAPVIQDIYDELKGGVAWIRRGGVGVFLGCVMLVHEDEIGNVLFTRNPELTIRIYGGFLLLESGTLRVTDCHFLISRPGVLWREVYTVGGY---VQGDRFILG 367 A+ +G EEE ++IA+HGCTP TG QLR LVET C VITL PG++YVLD+EI VRR VVI+GRPL+ P+IDAH I RAF VE G+LDLRFV+ WRGVP V+ ++Y EL+GGVAWIR GG GVF GC+MLVH+DE+G+VL + +T R+YGGFLLLE+GTLRV DCH L+ RPGVL REVYTVGGY V G+ F+ G Sbjct: 166 AEEKGXXEEEDASWGDYIAVHGCTPDTGVQLRSLVETGSCPVITLTPGVRYVLDEEIHVRRAVVIIGRPLTLPVIDAHLIARAFSVEAKGRLDLRFVKVWRGVPMAVVDEVYLELRGGVAWIREGGEGVFTGCLMLVHDDEVGDVLLASDLRVTARLYGGFLLLEAGTLRVRDCHMLLQRPGVLLREVYTVGGYILVVSGNLFMTG 371
BLAST of NO08G03380 vs. NCBI_GenBank
Match: EWM22289.1 (Pectin lyase fold/virulence factor [Nannochloropsis gaditana]) HSP 1 Score: 165.2 bits (417), Expect = 3.800e-37 Identity = 77/193 (39.90%), Postives = 119/193 (61.66%), Query Frame = 0 Query: 180 FIAIHGCTPQTGPQLRLLVETTECSVITLMPGMKYVLDDEIIVRRPVVIMGRPLSPPIIDAHFIYRAFLVEEGGKLDLRFVEAWRGVPAPVIQDIYDELKGGVAWIRRGGVGVFLGCVMLVHEDEIGNVLFTRNPELTIRIYGGFLLLESGTLRVTDCHFLISRPGVLWREVYTVGG---YVQGDRFILGRVW 370 ++A+ GCTP+ +LR +++ T C +TL+P Y + +++++RR V ++GRPL PIIDAH RAFLVE GG LD+RFVE +G V+ + L+G +IRRGGV +F GC + L P+ ++++GG ++ ESGTLRVTDCH R G+ +RE+ VGG + G+ ++ G ++ Sbjct: 3 YVAVEGCTPKNAEELRYMIDHTTCPRLTLVPATNYSITEQLVIRRRVTLVGRPLGLPIIDAHNTTRAFLVEAGGFLDVRFVEIVKGKFVEVVPLVLYRLRGPTCYIRRGGVALFTGCRFSANWRNAALFLGITPPQTNVQVFGGGIVAESGTLRVTDCHVFRPRIGIAFREIQFVGGEFLVLGGNMYLTGCIF 195
BLAST of NO08G03380 vs. NCBI_GenBank
Match: EWM25479.1 (hypothetical protein Naga_100207g1 [Nannochloropsis gaditana]) HSP 1 Score: 109.4 bits (272), Expect = 2.500e-20 Identity = 73/226 (32.30%), Postives = 114/226 (50.44%), Query Frame = 0 Query: 147 LPGLLEIDKYAYARSK---GGLADGQGIIEEEM------EENFIAIHGCTPQTGPQLRLLVE-TTECSVITLMPGMKYVL-----DDEIIVRRPVVIMGRPLSPPIIDAHFIYRAFLVEEGGKLDLRFVEAWRGVPAPVIQDIYDELKGGVAWIRRGGVGVFLGCVMLVHEDEIG--NVLFTRNPELTIRIYGGFLLLESGTLRVTDCHFLISRPGVLWREVYTVG 356 LPG +D A S G + G E+ + + I+ C PQ+G +LR + E + C++I+L+PG Y + DD+I + VI+G P+S P ID R F + GG LDL+FV +RG +I I L+GG A + GG G V+ + +G +L + +R++GG + + G + +T HF + +PGVL+RE+Y VG Sbjct: 104 LPGYKVLDGVAEKSSDLIGGVFGEEAGAASEDFFSTMLKDTSLISGSACVPQSGMELRQMAEDPSRCAIISLLPGKIYNVALPDSDDDITISTRKVIIGNPISLPTIDGADSKRIFHIVAGGNLDLQFVRTYRG-GGELIATI-PVLRGGTALVELGGRFSAFG-VIFTNAPPVGMPAILIAPDVSRAVRVFGGQVFVTGGIVTITLSHFWVLQPGVLFREIYVVG 326
BLAST of NO08G03380 vs. NCBI_GenBank
Match: EWM23493.1 (hypothetical protein Naga_100198g12 [Nannochloropsis gaditana]) HSP 1 Score: 87.8 bits (216), Expect = 7.700e-14 Identity = 56/172 (32.56%), Postives = 85/172 (49.42%), Query Frame = 0 Query: 185 GCTPQTGPQLRLLVETTECSVITLMPGMKYVLDDEIIVRRPVVIMGRPLSPPIIDAHFIYRAFLVEEGGKLDLRFVEAWRG---VPAPVIQDIYD---------ELKGGVAWIRRGGVGVFLGCVMLVHEDEIGNVLFTRNPELTI-----RIYGGFLLLESGTLRVTDCHF 340 GC G +L +E CS++ L PG Y L+ EI+VRR V++MG P P+ID R+F V EGG LDLRFV+ + V P +I+ E++GG +I G +G V+ + + ++ + R+ +I RIYGG + + G + C F Sbjct: 154 GCEVNDGLELTDAIENQSCSIVYLKPGQLYELEREILVRREVIVMGNPSVLPMIDGEDAIRSFHVLEGGFLDLRFVQQFASDGIVREPKPYEIFATTSPRNRVWEIRGGSVFIDEGALGGKFTGVIFIDDPDVEDAA-RRSIRRSIDGDVYRIYGGHVFIVGGRVDFVGCLF 324
BLAST of NO08G03380 vs. NCBI_GenBank
Match: XP_005854415.1 (hypothetical protein NGA_0231400, partial [Nannochloropsis gaditana CCMP526] >EKU21941.1 hypothetical protein NGA_0231400, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 80.5 bits (197), Expect = 1.200e-11 Identity = 55/164 (33.54%), Postives = 76/164 (46.34%), Query Frame = 0 Query: 179 NFIAIHGCTPQTGPQLRLLVET-TECSVITLMPGM--KYVLDDEIIVRRPVVIMGRPLS-PPIIDAHFIYRAFLVEEGGKLDLRFVEAWRGVPAPVIQDIYDELKGGVAWIRRGGVGVFLGCVMLVHEDEI-GNVLFTRNPELTIRIYGGFLLLESGTLRVTDC 338 N + C PQ G +L+ + E+ + CSVI L G KY L +IV +++G P+ P I + +YR F V+ GG LD+RFV +R P V D + GVA + GG C+ G V P RI GGF+L+ GT C Sbjct: 154 NLAGLQVCYPQNGEELKGMTESGSSCSVIILKKGSSDKYTLPSTVIVTSRKIVLGHPIDLPQIHPDNGVYRLFEVKPGGSLDIRFVSLFRPSPRKV-DDNLSVIVAGVALVELGGYMRGTACIFRQPAQTFEGFVKSLETPFARKRIVGGFVLVLGGTFFCYGC 316
BLAST of NO08G03380 vs. NCBI_GenBank
Match: XP_005853964.1 (hypothetical protein NGA_0462000 [Nannochloropsis gaditana CCMP526] >EKU22398.1 hypothetical protein NGA_0462000 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 80.1 bits (196), Expect = 1.600e-11 Identity = 54/179 (30.17%), Postives = 85/179 (47.49%), Query Frame = 0 Query: 178 ENFIAIHGCTPQTGPQLRLLVETTECSVITLMPG--MKYVLDDEIIVRRPVVIMGRPLSPPIIDAHFIYRAFLVEEGGKLDLRFVEAWRGVPAPVIQDIY-----------DELKGGVAWIRRGGVGV-FLGCVMLVHEDEIGNVLFTRNPELTI---RIYGGFLLLESGTLRVTDCHF 340 ++F+ + C P G +L VE C ++ L G Y LD++I V R V +MG P P IDA RAF V GG L+L+FV +G ++D Y E++GG + G +G F+G + ++ +V ++ RIYGG + + +GT+ C+F Sbjct: 107 KDFVGQNSCWPADGAELLDAVENQGCELVVLSSGDPDAYALDEDIKVNRYVRVMGNPAVLPQIDAEDAERAFTVGPGGLLELQFVRVRQG--GGTVRDRYGLEGSGSSSVVGEVRGGCVSVEPGALGANFVGVTFIAVANDWDSVQGAIEDQIDFVGGRIYGGHVYVAAGTVNFFGCNF 283
BLAST of NO08G03380 vs. NCBI_GenBank
Match: EWM24109.1 (hypothetical protein Naga_100286g5 [Nannochloropsis gaditana]) HSP 1 Score: 80.1 bits (196), Expect = 1.600e-11 Identity = 54/179 (30.17%), Postives = 85/179 (47.49%), Query Frame = 0 Query: 178 ENFIAIHGCTPQTGPQLRLLVETTECSVITLMPG--MKYVLDDEIIVRRPVVIMGRPLSPPIIDAHFIYRAFLVEEGGKLDLRFVEAWRGVPAPVIQDIY-----------DELKGGVAWIRRGGVGV-FLGCVMLVHEDEIGNVLFTRNPELTI---RIYGGFLLLESGTLRVTDCHF 340 ++F+ + C P G +L VE C ++ L G Y LD++I V R V +MG P P IDA RAF V GG L+L+FV +G ++D Y E++GG + G +G F+G + ++ +V ++ RIYGG + + +GT+ C+F Sbjct: 126 KDFVGQNSCWPADGAELLDAVENQGCELVVLSSGDPDAYALDEDIKVNRYVRVMGNPAVLPQIDAEDAERAFTVGPGGLLELQFVRVRQG--GGTVRDRYGLEGSGSSSVVGEVRGGCVSVEPGALGANFVGVTFIAVANDWDSVQGAIEDQIDFVGGRIYGGHVYVAAGTVNFFGCNF 302
BLAST of NO08G03380 vs. NCBI_GenBank
Match: EWM26475.1 (hypothetical protein Naga_100045g21 [Nannochloropsis gaditana]) HSP 1 Score: 80.1 bits (196), Expect = 1.600e-11 Identity = 57/180 (31.67%), Postives = 90/180 (50.00%), Query Frame = 0 Query: 180 FIAIHGCTPQTGPQLRLLVETTECSVITLM--PGMKYVLDD--EIIVRRPVVIMGRPLSPPIIDAHFIYRAFLVEEGGKLDLRFVEAWRGVPAPVIQDIYD------------ELKGGVAWIRRGGVGV-FLGCVML--VHEDEIGNVLFTRNPELT-IRIYGGFLLLESGTLRVTDCHF 340 F+ C P+ +L++ VE +C ++ L M Y+L D EI+V R V ++G P P IDA RAF + EGG L+L++V +G+ + +D Y E+KGG + G G F+G + L + E+ ++T RIYGG + + +GT+R +CHF Sbjct: 198 FVGKDTCWPRNIVELQIAVEEADCPLVVLTNPNPMAYMLMDMNEIMVMRHVRVLGHPALLPTIDAMMGMRAFTIMEGGFLELQYVRVRQGM--GMYRDRYGLEGRDDISSKVFEIKGGSVMLEEGAEGANFVGVIFLAVMTNQEMTEQAIQDQIDMTGWRIYGGHVYVTAGTVRFFNCHF 375
BLAST of NO08G03380 vs. NCBI_GenBank
Match: EWM25323.1 (hypothetical protein Naga_100281g10 [Nannochloropsis gaditana]) HSP 1 Score: 77.4 bits (189), Expect = 1.000e-10 Identity = 53/164 (32.32%), Postives = 76/164 (46.34%), Query Frame = 0 Query: 179 NFIAIHGCTPQTGPQLRLLVET-TECSVITLMPGM--KYVLDDEIIVRRPVVIMGRPLS-PPIIDAHFIYRAFLVEEGGKLDLRFVEAWRGVPAPVIQDIYDELKGGVAWIRRGGVGVFLGCVMLVHEDEI-GNVLFTRNPELTIRIYGGFLLLESGTLRVTDC 338 N + C PQ G +L+ + E+ + CSVI L G KY L +IV +++G P+ P I +YR F V+ GG LD+RFV +R P V +++ + GVA + GG C+ V P RI GGF+L+ GT C Sbjct: 154 NLAGLQVCYPQNGEELKGMTESGSSCSVIILKKGSSDKYTLPSTVIVTSRKIVLGHPIDLPQIHPDKEVYRLFEVKPGGSLDIRFVSLFRPSPRKVDENL-SVIVAGVALVELGGYMRGTACIFRQPAQTFEAFVKSLETPFARKRIVGGFVLVLGGTFFCYGC 316
BLAST of NO08G03380 vs. NCBI_GenBank
Match: XP_005853421.1 (hypothetical protein NGA_0438900, partial [Nannochloropsis gaditana CCMP526] >EKU22940.1 hypothetical protein NGA_0438900, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 76.3 bits (186), Expect = 2.300e-10 Identity = 51/165 (30.91%), Postives = 81/165 (49.09%), Query Frame = 0 Query: 186 CTPQTGPQLRLLVET-TECSVITLMPGMKYV--LDDEIIVRRPVVIMGRPLSPPIIDAH-FIYRAFLVEEGGKLDLRFVEAWRGVPAPVIQDIYDE---LKGGVAWIRRGGVGVFLGCVMLVHEDE---IGNVLFTRNPELTIRIYGGFLLLESGTLRVTDCHFL 341 C P+TGP+L+ +VE+ + CSV+ L G Y+ L ++V V+I+G P+ PP I +YR F V G +D+RFV +R P ++++ + G +R G G F G ++ + G V +P RI GGF+L+ G C + Sbjct: 163 CYPETGPELKAMVESGSSCSVVILKKGSSYIYLLPSTVMVTSSVIILGHPIDPPQIHPEKGVYRLFDVAAGSHIDIRFVSLFR----PALRNVGGNRSLIVAGCVLVRTG--GYFRGSGVIFRQQAQTFEGFVKGLMDPLAPKRIVGGFVLVAGGAFFCYGCQII 321 The following BLAST results are available for this feature:
BLAST of NO08G03380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 14
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G03380 ID=NO08G03380|Name=NO08G03380|organism=Nannochloropsis oceanica|type=gene|length=1116bpback to top protein sequence of NO08G03380.1 >NO08G03380.1-protein ID=NO08G03380.1-protein|Name=NO08G03380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=372bpback to top Synonyms
Publications
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