NO08G02800, NO08G02800 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO08G02800 vs. NCBI_GenBank
Match: PNH01468.1 (hypothetical protein TSOC_012642, partial [Tetrabaena socialis]) HSP 1 Score: 93.2 bits (230), Expect = 3.700e-15 Identity = 62/179 (34.64%), Postives = 91/179 (50.84%), Query Frame = 0 Query: 109 RIVAIDPGRVNLVTALD--SQTGKIKTLTRRAYYEKGRINECKRKFSSWEDALGDINAAFSRTTMKSCCPDLRSAYRELIVRHY---HRLWDARYEKKRARAHMAVYAGKQKVLDDFF----AGLTGPGQAKPIIAYGAAIFPHTGKGEVSVPVKRVLRVCERYYRTVYVPEHLTTKVH 279 RIV IDPGR N++ A++ S K+ LTR YY++ + K++ +SW + D A S + K DL A+ + H W+ + + A+ + +Y GK++VL FF G G +IAYGAA F GKGE+SVP V + C+ + T V E TTK+H Sbjct: 663 RIVVIDPGRTNIIYAVEVTSSGVKVYRLTRAQYYQESGVARGKQQATSWLRGVKDELAQLSTVSPKGA--DL-PAFLLFVATHLATSEARWEEAMKPRWAQMRLRLYGGKKRVLSRFFNEIARGQGGADSRPVVIAYGAAKFAPGGKGELSVPTSGVFKACQERFPTYLVDEFRTTKIH 838
BLAST of NO08G02800 vs. NCBI_GenBank
Match: PNH08370.1 (hypothetical protein TSOC_005131 [Tetrabaena socialis]) HSP 1 Score: 93.2 bits (230), Expect = 3.700e-15 Identity = 62/179 (34.64%), Postives = 91/179 (50.84%), Query Frame = 0 Query: 109 RIVAIDPGRVNLVTALD--SQTGKIKTLTRRAYYEKGRINECKRKFSSWEDALGDINAAFSRTTMKSCCPDLRSAYRELIVRHY---HRLWDARYEKKRARAHMAVYAGKQKVLDDFF----AGLTGPGQAKPIIAYGAAIFPHTGKGEVSVPVKRVLRVCERYYRTVYVPEHLTTKVH 279 RIV IDPGR N++ A++ S K+ LTR YY++ + K++ +SW + D A S + K DL A+ + H W+ + + A+ + +Y GK++VL FF G G +IAYGAA F GKGE+SVP V + C+ + T V E TTK+H Sbjct: 377 RIVVIDPGRTNIIYAVEVTSSGVKVYRLTRAQYYQESGVARGKQQATSWLRGVKDELAQLSTVSPKGA--DL-PAFLLFVATHLATSEARWEEAMKPRWAQMRLRLYGGKKRVLSRFFNEIARGQGGADSRPVVIAYGAAKFAPGGKGELSVPTSGVFKACQERFPTYLVDEFRTTKIH 552
BLAST of NO08G02800 vs. NCBI_GenBank
Match: PNH08357.1 (hypothetical protein TSOC_005129 [Tetrabaena socialis]) HSP 1 Score: 93.2 bits (230), Expect = 3.700e-15 Identity = 62/179 (34.64%), Postives = 91/179 (50.84%), Query Frame = 0 Query: 109 RIVAIDPGRVNLVTALD--SQTGKIKTLTRRAYYEKGRINECKRKFSSWEDALGDINAAFSRTTMKSCCPDLRSAYRELIVRHY---HRLWDARYEKKRARAHMAVYAGKQKVLDDFF----AGLTGPGQAKPIIAYGAAIFPHTGKGEVSVPVKRVLRVCERYYRTVYVPEHLTTKVH 279 RIV IDPGR N++ A++ S K+ LTR YY++ + K++ +SW + D A S + K DL A+ + H W+ + + A+ + +Y GK++VL FF G G +IAYGAA F GKGE+SVP V + C+ + T V E TTK+H Sbjct: 324 RIVVIDPGRTNIIYAVEVTSSGVKVYRLTRAQYYQESGVARGKQQATSWLRGVKDELAQLSTVSPKGA--DL-PAFLLFVATHLATSEARWEEAMKPRWAQMRLRLYGGKKRVLSRFFNEIARGQGGADSRPVVIAYGAAKFAPGGKGELSVPTSGVFKACQERFPTYLVDEFRTTKIH 499
BLAST of NO08G02800 vs. NCBI_GenBank
Match: PNH08379.1 (hypothetical protein TSOC_005114 [Tetrabaena socialis]) HSP 1 Score: 93.2 bits (230), Expect = 3.700e-15 Identity = 62/179 (34.64%), Postives = 91/179 (50.84%), Query Frame = 0 Query: 109 RIVAIDPGRVNLVTALD--SQTGKIKTLTRRAYYEKGRINECKRKFSSWEDALGDINAAFSRTTMKSCCPDLRSAYRELIVRHY---HRLWDARYEKKRARAHMAVYAGKQKVLDDFF----AGLTGPGQAKPIIAYGAAIFPHTGKGEVSVPVKRVLRVCERYYRTVYVPEHLTTKVH 279 RIV IDPGR N++ A++ S K+ LTR YY++ + K++ +SW + D A S + K DL A+ + H W+ + + A+ + +Y GK++VL FF G G +IAYGAA F GKGE+SVP V + C+ + T V E TTK+H Sbjct: 93 RIVVIDPGRTNIIYAVEVTSSGVKVYRLTRAQYYQESGVARGKQQATSWLRGVKDELAQLSTVSPKGA--DL-PAFLLFVATHLATSEARWEEAMKPRWAQMRLRLYGGKKRVLSRFFNEIARGQGGADSRPVVIAYGAAKFAPGGKGELSVPTSGVFKACQERFPTYLVDEFRTTKIH 268
BLAST of NO08G02800 vs. NCBI_GenBank
Match: PNH00238.1 (hypothetical protein TSOC_013956 [Tetrabaena socialis]) HSP 1 Score: 87.8 bits (216), Expect = 1.500e-13 Identity = 65/239 (27.20%), Postives = 103/239 (43.10%), Query Frame = 0 Query: 51 FHNRVSTDGVSVSVFFHVAKERLEXXXXXXXXXXXXXXXXXXXXXXQGQENLQPVRER----RIVAIDPGRVNLVTALD---SQTGKIKTLTRRAYYEKGRINECKRKFSSWEDALGDINAAFSRTTMKSCCPDLRSAYRELIVRHYHRLWDARYEKKRARAHMAVYAGKQKVLDDFFA----GLTGPGQAKPIIAYGAAIFPHTGKGEVSVPVKRVLRVCERYYRTVYVPEHLTTKVH 279 F + TDGVSV + + K + + + +P E+ R+V IDPGR N+V A++ KI LTR YY++ + + ++ + W + + A S + K L A+ + W + + A+ + +Y GK++V+ FF+ G G +I YGAA F GKGE+SVP V + C + T V E TTK+H Sbjct: 299 FTGTIETDGVSVCIHYMRPKRK---------EAEEEADDGGNEEAPKAKSKQRPTPEQLSGSRVVVIDPGRTNIVYAVEVPPEAPPKIYRLTRSQYYQESGVVQGSQRAARWLRGVKEELAQLSTASPKGASLPLFQAFIATYLETCEVRWTEALKTRWAQQSLRLYGGKKRVVAKFFSEIARGDAGAPARPVVIGYGAAKFAPGGKGELSVPTSGVFKACRERFPTYLVDEFRTTKIH 528
BLAST of NO08G02800 vs. NCBI_GenBank
Match: PNH02916.1 (hypothetical protein TSOC_011071 [Tetrabaena socialis]) HSP 1 Score: 86.7 bits (213), Expect = 3.400e-13 Identity = 76/261 (29.12%), Postives = 117/261 (44.83%), Query Frame = 0 Query: 51 FHNRVSTDGVSVSVFFHVAKERLEXXXXXXXXXXXXXXXXXXXXXXQGQEN-------LQPVRER----RIVAIDPGRVNLVTALDSQTG--KIKTLTRRAYYEKGRINECKRKFSSWEDALGDINAAFSRTTMKSCCPDLRSAYRELIVRHYH---RLWDARYEKKRARAHMAVYAGKQKVLDDFFAGLT--GPG-QAKP-IIAYGAAIFPHTGKGEVSVPVKRVLRVCERYYRTVYVPEHLTTKVHLDCGQRLNPIARR 292 F + TDGVSV + + K + E + + + L+P E+ RIV IDPGR N++ A++ KI LTR YY++ + K++ ++W + S + K DL+ A+ + H W+ + + A+ H+ +Y GK++VL FF + PG A+P II YGAA F GKGE+SVP V + C + T V E +TKV+ L +A R Sbjct: 298 FTGTIETDGVSVCIHYMRPKAKEEEGSGFAAPNPPKGHVGVETLAEKSKASRNPKSSPLRPTPEQLSRCRIVVIDPGRTNIIYAVEVTPDGVKIYRLTRAQYYQESGVERGKQQAANWLRGTKEELTKLSAASPKGA--DLQ-AFLVFVTTHLETSDARWEEALKPRWAQMHLRLYGGKKRVLAKFFDEIARGDPGAPARPVIIGYGAAKFAPGGKGELSVPTCGVFKACRARFPTHLVDEFRSTKVYHADDSILQGVAER 555
BLAST of NO08G02800 vs. NCBI_GenBank
Match: KXZ41250.1 (hypothetical protein GPECTOR_607g688 [Gonium pectorale]) HSP 1 Score: 81.6 bits (200), Expect = 1.100e-11 Identity = 59/197 (29.95%), Postives = 95/197 (48.22%), Query Frame = 0 Query: 109 RIVAIDPGRVNL---VTALDSQTGKIKTLTRRAYYEKGRINECKRKFSSWEDALGDINAAFSRTTMKSCCPDLRSAYRELIVRHYHRLWDARYEKKRARAHMAVYAGKQKVLDDFFAGLTGPGQAK-----PIIAYGAAIFPHTGKGEVSVPVKRVLRV-CERYYRTVY-VPEHLTTKVHLDCGQRLNPIARRTEGE 296 R++A++ GR N+ V LD ++ LTR YY + I R+ W + A S + K + + + + +LW + + A+ + ++ GK++ L F GL G+A+ +IAYGAA F GKGE+SVP R+ R R+ R VY V E TT+VH + L + +R +G+ Sbjct: 268 RVLAVNLGRTNIAYVVELLDDGRLRVYRLTRAGYYRESGILGAARRAQHWLKGVRRATQALSLVSSKGAGLEAFLVFVRVHLETSGQLWAEMLKHRWAQERLRLHGGKKRALALFLEGLVWAGEARGDRRPVLIAYGAAGFASGGKGELSVPTTRMYRAFTHRFLRLVYLVDEFRTTRVHHEDDSVLESVHKRKKGK 464
BLAST of NO08G02800 vs. NCBI_GenBank
Match: AAL56217.1 (unknown [White spot syndrome virus]) HSP 1 Score: 73.2 bits (178), Expect = 3.900e-9 Identity = 94/307 (30.62%), Postives = 144/307 (46.91%), Query Frame = 0 Query: 20 MDTKKFCQDAVSVKEMWDETFQVGNLRNQRV---FHNRVSTDGVSVSVFFHVAKERLEXXXXXXXXXXXXXXXXXXXXXXQGQENLQPVRERRIVAIDPGRVNLV--TALDSQTGKI---KTLTRRAYYEKG------RINECKRK--------------FSSWEDALGDINAAFSRTTMKSCCPDLRSAYRELIVRHYHRLWDARYEKKRARAHMAVYAGKQKVLDDFFAGLTGPGQAK---PIIAYGAAIFPHTGKGEVSVPVKRVL--RVCERY---YRTVYVPEHLTTKVHLDCGQRLNPIAR 291 M+ + + + K+ W F V ++ R FH+ + TDG VSV F E XXXXXXXXXXXXXXXX + + N P + +V +DPGR N+V + D++ ++ +T + YY++ + NE +K + + E+ + D N S T K AY +++ HY LW+ + +KK + M VY+ KQK + +F L P + K IA+G A F TG+GE R+ ++ ER R +V E T+KV C Q LN + + Sbjct: 164 MEERHKQSEDILYKQGWYLLFDVKKIKKLRPNWNFHS-IQTDGEGVSVLFSREVE-------XXXXXXXXXXXXXXXXGDEDRRNYPPTNAKYVVGVDPGRTNVVSCSVFDTRQKRVVRKHRMTAKQYYQESWMTDRRKANETYKKNNKEYKEALEEITRYDNGEEIINDGNGDTSTPTKKF------EAYLKVVNEHYRLLWNEKGKKKYRKNAMKVYSRKQKCISNFIDELI-PKRDKIEDYHIAFGDAKFACTGRGEQYASPARIFAKKIKERVGGDKRFTFVDEKYTSKVCHRCNQPLNMLEK 455
BLAST of NO08G02800 vs. NCBI_GenBank
Match: GAX84515.1 (hypothetical protein CEUSTIGMA_g11935.t1 [Chlamydomonas eustigma]) HSP 1 Score: 66.2 bits (160), Expect = 4.800e-7 Identity = 49/172 (28.49%), Postives = 74/172 (43.02%), Query Frame = 0 Query: 116 GRVNL--VTALDSQTGKIKTLTRRAYYEKGRINECKRKFSSWEDALGDINAAFSRTTMKSCCPDLRSAYRELIV---RHYHRLWDARYEKKRARAHMAVYAGKQKVLDDFF----AGLTGPGQAKPIIAYGAAIFPHTGKGEVSVPVKRVLRVCERYYRTVYVPEHLTTKVH 279 GR+N+ + L + LTR+ YY + + K W + A S + K +A+ ++ RH LW + + AR +++Y GK++V +FF L P + +IAYG A F G GE SVP R + C T E T+KVH Sbjct: 254 GRINIYYMVGLYGGNPAVMKLTRKQYYTESGATSARYKTERWNRGIQTHLDALSTASTKGVS---WTAHEWCLIERGRHQEALWSEYLKPRWARLRLSLYGGKKRVFANFFNRLSVRLPFPAGGRLVIAYGNAKFAPGGPGEQSVPTTRAYKECASRVATYSTDEFRTSKVH 422 The following BLAST results are available for this feature:
BLAST of NO08G02800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 9
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G02800 ID=NO08G02800|Name=NO08G02800|organism=Nannochloropsis oceanica|type=gene|length=2455bpback to top protein sequence of NO08G02800.1 >NO08G02800.1-protein ID=NO08G02800.1-protein|Name=NO08G02800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=750bpback to top Synonyms
Publications
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