NO08G02370, NO08G02370 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO08G02370 vs. NCBI_GenBank
Match: EWM26722.1 (hypothetical protein Naga_100001g144 [Nannochloropsis gaditana]) HSP 1 Score: 340.9 bits (873), Expect = 4.300e-90 Identity = 182/301 (60.47%), Postives = 227/301 (75.42%), Query Frame = 0 Query: 1 MYRRAALAAPAKVTAVASSPSSGEALTAGTSWKEWRTSAVLYVANALPASERRAILDRWGDITHKVTHE---ADAQLSTMRSDLYNAKAAEANALAEVGRLKQLISFHAKIKPEETMQATHPVLGQLVADMGYKKIYCASIKQLGDVVIWEQQRILRKERAHAIAREKARRSFPVKFPGIITLYQLPDGQYKLLDGQHRLAALKILADTGIINKDTNFCLVEVFALEKESEARALFLEINSAMPVKLIDMPDGIGSRPDIKCIIDGAMNRMLSRYPAFFKSSLNPKLPHINIDNLRDDLYQ 299 M R A PA V +S+ ++ K+ +L +A LP S+R+ I+ +W + + + QL MR ++ AKA+ +AL EV RL++ I+F KIKPE+ ++HPVLGQL+ADMGYKK+YCA+I QL DV IWE+QRILR+ERA +IAREK R+SFPVK PGIITLYQL D QYKLLDGQHRLAALKILAD+GII+KD NFCL+EVF LEKESEARALFLEINSAMPVKLID+PDG G+RPDIK IIDGA++ ++S++PAFFKSSLNPKLPH+NIDN+RD L+Q Sbjct: 1 MRRHATSVVPAAVNNFSSASLPKAKISLSRLCKD----LILRMATMLPVSDRKEIMAQWMAQESSIYTDIATVENQLLRMRLEVETAKASHVSALQEVERLRERITFQTKIKPED---SSHPVLGQLIADMGYKKVYCATINQLADVPIWEKQRILRRERAESIAREKMRQSFPVKLPGIITLYQLADKQYKLLDGQHRLAALKILADSGIISKDNNFCLLEVFTLEKESEARALFLEINSAMPVKLIDLPDG-GARPDIKGIIDGAVDNLVSQFPAFFKSSLNPKLPHVNIDNMRDALFQ 293
BLAST of NO08G02370 vs. NCBI_GenBank
Match: EWM28085.1 (hypothetical protein Naga_100120g24 [Nannochloropsis gaditana]) HSP 1 Score: 158.7 bits (400), Expect = 3.100e-35 Identity = 91/239 (38.08%), Postives = 138/239 (57.74%), Query Frame = 0 Query: 81 LYNAKAAEANALAEVGRLKQLISFHAKIKPEETMQA---THPVLGQLVADMGYKKIYCASIKQLGDVVIWEQQRILRKERAHAIARE---KARRSFPVKFPGIITLYQLPDGQYKLLDGQHRLAALKILADTGIINKDTNFCLVEVFALEKESEARALFLEINSAMPVKLIDMPDGIGSRPDIKCIIDGAMNRMLSRYPAFFKSSLNPKLPHINIDNLRDDLYQVKNKRQRRGEGERRE 314 L +A A E+ + + ++K + Q+ HPV G+LV D+ YKKIYC S+++L + IWEQQRI R ERA +A + K + + PG +T+Y++ + + LLDGQHRL ALK+L D+G++ + + LVEVF ++ + + + LF EIN+A PV +IDMPD + K II + + FK S+N +LPH+NID LRD L++ N R G G ++ Sbjct: 67 LEEVRAGGKEAEQEMAEMAGWVKDKVRVKQQVVQQSPVILHPVFGELVKDLTYKKIYCTSVQKLASIPIWEQQRIYRAERAQLLANDIKAKLQEGKALTLPGSLTVYEMGE-EIGLLDGQHRLGALKLLMDSGVLIPEAHLILVEVFPVKAQEDVKRLFTEINTAQPVSIIDMPDMADASE--KEIITQTAELLRIEFSEMFKPSVNCRLPHVNIDVLRDGLFK-SNVVGRTGTGNAQQ 301
BLAST of NO08G02370 vs. NCBI_GenBank
Match: GAX16957.1 (hypothetical protein FisN_5Hh335 [Fistulifera solaris]) HSP 1 Score: 152.9 bits (385), Expect = 1.700e-33 Identity = 83/212 (39.15%), Postives = 127/212 (59.91%), Query Frame = 0 Query: 94 EVGRLKQLISFHAKIKPEETMQAT-----HPVLGQLVADMGYKKIYCASIKQLGDVVIWEQQRILRKERAHAIAREKARRSFPVKFPGIITLYQLPDGQYKLLDGQHRLAALKILADTGIINKDTNFCLVEVF---ALEKESEARALFLEINSAMPVKLIDMPDGIGSRPDIKCIIDGAMNRMLSRYPAFFKSSLNPKLPHINIDNLRDDLY 298 EVG K + +ET + T HP+LG A +GYK ++ S K L D+ +WE+QRI R +RA A+A++K ++ + PG+ITLY+ DG+ ++DGQHR+ + +L + + D + LVEV+ A E A+ +FLEIN A PVKL+DMP G+ + D + II+ ++ RYP+ F S ++P++NIDNLRD L+ Sbjct: 154 EVGIAKTSSVMEKSAQKDETQEETQSKQEHPILGMAHASLGYKSVHLVSAKDLADIPVWEKQRIYRHDRAKAMAQDKL-KTMKLGMPGVITLYEDRDGKLSIIDGQHRVGMMSLLNEQSVEGLDLDNVLVEVYKELAEYGEDHAKDIFLEINKAEPVKLLDMP-GVATAKD-RTIINRGAQLLMERYPSMFSPSQKCRVPNLNIDNLRDALF 362
BLAST of NO08G02370 vs. NCBI_GenBank
Match: OEU09480.1 (hypothetical protein FRACYDRAFT_248332 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 147.5 bits (371), Expect = 7.000e-32 Identity = 79/193 (40.93%), Postives = 123/193 (63.73%), Query Frame = 0 Query: 112 ETMQATHPVLGQLVADMGYKKIYCASIKQLGDVVIWEQQRILRKERAHAIAREKARRSFPVKFPGIITLYQLPDGQYKLLDGQHRLAALKILADTGIINKDTNF--CLVEVFALEK----ESEARALFLEINSAMPVKLIDMPDGIGSRPDIKCIIDGAMNRMLSRYPAFFKSSLNPKLPHINIDNLRDDLYQ 299 E + HP+LG+ ++++GYK+I+ AS+K L + +WE+QRI R R +A +K ++ + PGII +++ DG ++DGQHR+ LK+L +T + + D +F LVEV+ K E+ A+ LFLE+N A PVKL+D+P G+G+ D K II+ +R+ +P F S + PH+NIDNLRD L+Q Sbjct: 193 EILLGEHPILGKCISELGYKRIHLASLKNLATIPVWEKQRIFRLARTKKMATDK-MKTLHLGLPGIIGIFENIDGSLNIVDGQHRVGMLKVL-ETKVTSDDFDFDNILVEVYPALKDEHEETHAKDLFLEVNKAEPVKLVDLP-GVGNASD-KKIINEVADRLQDSFPEMFSDSQRCRAPHLNIDNLRDALFQ 381
BLAST of NO08G02370 vs. NCBI_GenBank
Match: GAX25253.1 (hypothetical protein FisN_5Lh335 [Fistulifera solaris]) HSP 1 Score: 147.5 bits (371), Expect = 7.000e-32 Identity = 80/212 (37.74%), Postives = 125/212 (58.96%), Query Frame = 0 Query: 94 EVGRLKQLISFHAKIKPEETMQAT-----HPVLGQLVADMGYKKIYCASIKQLGDVVIWEQQRILRKERAHAIAREKARRSFPVKFPGIITLYQLPDGQYKLLDGQHRLAALKILADTGIINKDTNFCLVEVF---ALEKESEARALFLEINSAMPVKLIDMPDGIGSRPDIKCIIDGAMNRMLSRYPAFFKSSLNPKLPHINIDNLRDDLY 298 EVG+ K + T + T HPVLG A +GYK ++ S K L D+ +WE+QRI R +RA ++A++K ++ + PG+ITLY+ DG+ ++DGQHR+ + +L + + D + LVEV+ E A+ +FLEIN A PVKL+DMP G+ + D + II+ ++ R+P+ F S ++P++NIDNLRD L+ Sbjct: 158 EVGKAKTSSVMERVADKDATQEETQSEQEHPVLGMAYASLGYKSVHLVSAKDLADIPVWEKQRIYRHDRAKSMAQDK-MKTMKLGMPGVITLYEDRDGKLSIIDGQHRVGMMSLLNEQSVEGLDLDSVLVEVYKELPEYGEDHAKDIFLEINKAEPVKLLDMP-GVATAKD-RTIINRGAQLLMERFPSMFSPSQKCRVPNLNIDNLRDALF 366
BLAST of NO08G02370 vs. NCBI_GenBank
Match: XP_005824709.1 (hypothetical protein GUITHDRAFT_154866 [Guillardia theta CCMP2712] >EKX37729.1 hypothetical protein GUITHDRAFT_154866 [Guillardia theta CCMP2712]) HSP 1 Score: 135.2 bits (339), Expect = 3.600e-28 Identity = 85/199 (42.71%), Postives = 114/199 (57.29%), Query Frame = 0 Query: 109 KPEETMQATHPVLGQLVADMGYKKIYCASIKQL-GDVVIWEQQRILRKERAHAIAREKARRSFPVKFPGIITLYQLP-DGQYKLLDGQHRLAALKILA-DTGIINKDTNF------CLVEVFALEKESEARALFLEINSAMPVKLIDMPDGIGSRPDIKCIIDGAMNRMLSRYPAFFKSSLNPKLPHINIDNLRDDLYQ 299 KP T QA HP+ G+ +AD GYKK++ A +L I+++QR R ERA +IAR KA+ S +PG I++ + GQ L+DGQHRL A +LA N D LVEV+ + E+ A +F EIN A P KL+D+P K IIDGA ++ RY A FK S + PH+NIDNLRD+L+Q Sbjct: 113 KPLNTEQADHPIFGRFLADFGYKKVFAADPSKLYTSTPIYKKQRTFRTERASSIARAKAKSSV-TGWPGTISVVEYTGKGQAVLVDGQHRLGAHTLLARQMKSQNPDRPLPLGMTEILVEVYPADNENMAAEVFTEINKAEPCKLVDLPQA-KVPVQTKKIIDGASEKLRQRYSAMFKPSSACRTPHMNIDNLRDELFQ 309
BLAST of NO08G02370 vs. NCBI_GenBank
Match: XP_002178828.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49526.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 134.8 bits (338), Expect = 4.700e-28 Identity = 76/185 (41.08%), Postives = 114/185 (61.62%), Query Frame = 0 Query: 118 HPVLGQLVADMGYKKIYCASIKQLGDVVIWEQQRILRKERAHAIAREKARRSFPVKFPGIITLYQLPDGQYKLLDGQHRLAALKILADTGIINKDTNF--CLVEVFALEK---ESEARALFLEINSAMPVKLIDMPDGIGSRPDIKCIIDGAMNRMLSRYPAFFKSSLNPKLPHINIDNLRDDLY 298 HPVLG +AD G+K+I+ S L + +W++QRI R +RA A+A +K ++ + PGII L++ +G+ ++DGQHR+ + IL + + D + LVEV+ ++ A+ LFLE+N A PVKL+DMP G+ D K I +GA R+ +Y FKSS + PH+NIDNLRD L+ Sbjct: 512 HPVLGAAIADFGHKRIHVVSAHALSTIPVWKKQRIYRHDRAKAMASDK-MKTLHLGMPGIIGLHEDLNGKLSIIDGQHRVGMMTILHEKCASHDDFDLDRVLVEVYPQNPDHVDTHAQDLFLEVNKAEPVKLVDMP-GVAKGSDRKIISEGA-ERIAEKYAEMFKSSQKCRPPHLNIDNLRDALF 693
BLAST of NO08G02370 vs. NCBI_GenBank
Match: XP_005830034.1 (hypothetical protein GUITHDRAFT_111100 [Guillardia theta CCMP2712] >EKX43054.1 hypothetical protein GUITHDRAFT_111100 [Guillardia theta CCMP2712]) HSP 1 Score: 128.6 bits (322), Expect = 3.400e-26 Identity = 70/188 (37.23%), Postives = 110/188 (58.51%), Query Frame = 0 Query: 118 HPVLGQLVADMGYKKIYCAS-IKQLGDVVIWEQQRILRKERAHAIAREKARRSFPVKFPGIITLYQLPDGQYK-----LLDGQHRLAALKILADTGIINKDTNFCLVEVFALEKESEARALFLEINSAMPVKLIDMP-DGIGSRPDIKCIIDGAMNRMLSRYPAFFKSSLNPKLPHINIDNLRDDLYQ 299 H + GQL+ D+GYKKIYCA+ + L IW++QR R+ RA +IA K + S +PG I++ ++ D + ++DGQHRLAA +L+ + + +VEV+ ++ LF+EIN A P+ +D+P +G+ + I+ GA R+ P FK S N ++PH+NID LRD+L+Q Sbjct: 86 HEIYGQLMVDLGYKKIYCANPVTLLAQAKIWKKQRAFRQHRAESIANSKMKSSVK-GWPGTISIAEIKDPENSEKECFIVDGQHRLAACMLLSSKENAPEGADKVIVEVYPDMQDQNTTDLFVEINKAEPILHVDIPIADVGASATHQAILSGAAERLQKMNPEMFKESQNCRIPHMNIDRLRDELHQ 272
BLAST of NO08G02370 vs. NCBI_GenBank
Match: KOO30123.1 (hypothetical protein Ctob_012497 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 127.1 bits (318), Expect = 9.900e-26 Identity = 77/204 (37.75%), Postives = 112/204 (54.90%), Query Frame = 0 Query: 113 TMQATHPVLGQLVADMGYKKIYCASIKQL-GDVVIWEQQRILRKERAHAIAREKARRSFPVKFPGIITLYQ---------LPDGQ------YKLLDGQHRLAALKILADTGIINKDTNFCLVEVFALEKESEARALFLEINSAMPVKLIDMPDGIGSRPDIKCIIDGAMNRMLSRYPAFFKSSLNPKLPHINIDNLRDDLYQVK 301 ++ +HPV G+L+AD GYK++Y S L ++WE+QR R+ERA+ IA KA +S +PG I + + P G L+DGQHRL A +LA G ++ LVEV+ +E + LF EIN A PV L+D+P+G S D I+ A + RYPA FK S + PH+N+D LR +L++ + Sbjct: 176 SVMGSHPVFGELIADFGYKRLYRGSPTTLWAGTMLWERQRAFRQERANLIAAAKA-KSKATGWPGAIAVVERSSSGSEASAPTGHGGGTAIGTLIDGQHRLGAAHLLAQRGKLDGALASILVEVYPPMEEQGVKDLFTEINRAEPVLLVDLPEGGASDQD-NAILTAAAEELAQRYPAMFKPSHGCRPPHLNVDVLRAELHRAE 377
BLAST of NO08G02370 vs. NCBI_GenBank
Match: XP_002504165.1 (predicted protein [Micromonas commoda] >ACO65423.1 predicted protein [Micromonas commoda]) HSP 1 Score: 125.6 bits (314), Expect = 2.900e-25 Identity = 79/215 (36.74%), Postives = 116/215 (53.95%), Query Frame = 0 Query: 112 ETMQATHPVLGQLVADMGYKKIYCASIKQL---GDVVIWEQQRILRKERAHAIAREKARRSFPVKFPGIITLYQ----------------------LPDGQYKLLDGQHRLAALKILADTGIINKDTNFCLVEVFALEKESEARALFLEINSAMPVKLIDMPDGIGSRP-DIKCIIDGAMNRMLSRYPAFFKSSLNPKLPHINIDNLRDDLYQVK 301 E A+H + G ++ D GYKKIY K L V I++QQR R ERA IA EKA+ + PG++TL + + +LDGQHR+ AL+IL G+I D + LVEVF ++ A +F EIN+A P++ +DMP G P D+K +++GA R+ RY A F +S K+P+IN+D LR++L+ + Sbjct: 260 EKKVASHELYGTMLRDFGYKKIYAMPAKNLVCKDKVGIYDQQRAFRAERAQVIAAEKAKEAV-FSLPGVVTLAEGTAAVRGKKTKKKSSLLFGSSSANNTGAHILDGQHRVGALEILLSQGVIAPD-HTVLVEVFENVDDARASEIFTEINAAQPIRFVDMP---GVAPADVKWMLEGAAQRIKERYRAMFSASERCKIPNINLDVLREELFSAE 469 The following BLAST results are available for this feature:
BLAST of NO08G02370 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G02370 ID=NO08G02370|Name=NO08G02370|organism=Nannochloropsis oceanica|type=gene|length=3339bpback to top protein sequence of NO08G02370.2 >NO08G02370.2-protein ID=NO08G02370.2-protein|Name=NO08G02370.2|organism=Nannochloropsis oceanica|type=polypeptide|length=322bpback to top protein sequence of NO08G02370.1 >NO08G02370.1-protein ID=NO08G02370.1-protein|Name=NO08G02370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=371bpback to top Synonyms
Publications
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