NO08G01960, NO08G01960 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G01960 vs. NCBI_GenBank
Match: EWM26674.1 (Cobalamin (vitamin B12) biosynthesis CobW [Nannochloropsis gaditana]) HSP 1 Score: 444.1 bits (1141), Expect = 6.500e-121 Identity = 254/423 (60.05%), Postives = 290/423 (68.56%), Query Frame = 0 Query: 127 LSSSSMGSSTAIGISKIIPVTIISGFLGAGKTTLLNYILTQPHGKRIAVIENEFGQGLGIESAIAKDGADGSSLEGFFELANGCICCSVKSDLLATLEILVQRKSQFDYVLIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKHIGRHLRXXXXXXXXXXXXXXXXXXXSTENGKQGQKWISPSQGAALK---SEEGNTQHEPFLPPSSTTLTGKTNCHREEAYQQICVADRILLNKTDLVTEADLSKLEAELRGLNGMARIQRTNFSKIDLDFVLGLDCYGARKKDDVSLPFL-----NVCGAEHVHGGNEEGRRDDEVRTVAWVEGVEVKVEAVKQWLAELLWRDD------------XXXXXXXXXXXXXXXXXXXIYRMKGTLAVAGSEVLHILQAVHETFELEPSQTLVGEG 530 LS + GSS I I KI+PVTII+GFLG+GKTTLLN+ILTQPHGKRIAVIENEFG+GLGIESAIAKDGADGSSLEGFFELANGCICCSVK+DLLATLE+LVQRKSQFDYV+IETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAK+I RH+ G++GQ + S +K +E + + + +REEA++QICVADRI+LNKTDLV E D LE ELRGLNGMARIQRT +S +DLDFVLGL+CY + K+D LPFL N G H HGG + EV T+A VE VEV EAVK+WLA+LLWRDD IYRMKGTL+VAGS+++HILQAVHETFELE SQT G G Sbjct: 44 LSETKSGSSNPIPIDKIVPVTIITGFLGSGKTTLLNHILTQPHGKRIAVIENEFGKGLGIESAIAKDGADGSSLEGFFELANGCICCSVKNDLLATLEVLVQRKSQFDYVIIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKYISRHIH---------------------RGGQEGQTFQGDSHLERVKNRGAERVTSDVSNICENLRCPVASEEVYYREEAFRQICVADRIVLNKTDLVPEEDTISLEDELRGLNGMARIQRTVYSHVDLDFVLGLECYSGKTKED-PLPFLSCGERNGDGERHSHGGVK------EVTTLAIVEPVEVDGEAVKRWLADLLWRDDPSDGKEGEREDVGRDEGIQDSIRESRCQRQQIYRMKGTLSVAGSDMVHILQAVHETFELEASQTPGGGG 438
BLAST of NO08G01960 vs. NCBI_GenBank
Match: XP_005824222.1 (hypothetical protein GUITHDRAFT_158618 [Guillardia theta CCMP2712] >EKX37242.1 hypothetical protein GUITHDRAFT_158618 [Guillardia theta CCMP2712]) HSP 1 Score: 263.5 bits (672), Expect = 1.600e-66 Identity = 165/442 (37.33%), Postives = 228/442 (51.58%), Query Frame = 0 Query: 127 LSSSSMGSSTAIGIS--KIIPVTIISGFLGAGKTTLLNYILTQPHGKRIAVIENEFGQGLGIESAIAKDGADGSSLEGFFELANGCICCSVKSDLLATLEILVQRKSQFDYVLIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKHIGRHLRXXXXXXXXXXXXXXXXXXXSTENGKQGQKWISPSQGAALKSEEGNTQHEPFLPPSSTTLTGKTNCHREEAYQQICVADRILLNKTDLVTEADLSKLEAELRGLNGMARIQRTNFSKIDLDFVLGLDCYGARKKDDVSLPFLNVCGAEH-----VHGGNEEGRRDDEVRTVAWVEGVEVKVEAVKQWLAELLWRDDXXXXXXXXXXXXXXXXXXXIYRMKGTLAVAGSEVLHILQAVHETFELEPSQTLVGEGDKGEGGEERRGGKECRLVVIGKGLDEGHLRAG 562 ++S + G +TA K++PVT++SGFLG+GKTTLLN ILT HGKRIAVI+NEFG+ LG+ SA+A +G G E FE+ NGCICCSV+ DL+ TLE +++ +++FDY+L+ET+G+A+PGP+AS W+D ELES L LD IVT+VDAKHI +HL +P L C EA QQI ADRILLNK DLVTEA++ +E LR +NG+A I RT S+IDLD +L + + A + +V L G EH H ++ TV+ E + + WL +LW ++ I+RMKG L + G E +LQ VH F++ P+Q V + ++V IG+ LD L+ G Sbjct: 1 MASPAAGHNTAGQAKPLKLVPVTVLSGFLGSGKTTLLNRILTSHHGKRIAVIQNEFGEDLGLGSALAAEGKAGQIFEECFEMNNGCICCSVRDDLINTLERIMKNRNKFDYILVETTGMANPGPIASIFWLDSELESSLHLDAIVTLVDAKHILKHL------------------------------------------------DDPAL------------CSSLEAAQQIAFADRILLNKIDLVTEAEVEVVERRLREINGVAPIYRTQNSEIDLDNILDVKAFDAERAKEVELGTSADKGCEHGEDCSGHDXXXXXXXXXKIGTVSCSEDRALDERKLNLWLGGVLWENE---------------GGMTIFRMKGLLTIHGEETQMVLQGVHNLFDILPAQAQVDSQSRS------------KIVFIGQNLDRLALQKG 355
BLAST of NO08G01960 vs. NCBI_GenBank
Match: OQR85746.1 (cobalamin synthesis protein [Achlya hypogyna]) HSP 1 Score: 261.2 bits (666), Expect = 7.800e-66 Identity = 166/430 (38.60%), Postives = 220/430 (51.16%), Query Frame = 0 Query: 140 ISKIIPVTIISGFLGAGKTTLLNYILTQPHGKRIAVIENEFGQGLGIESAIAKDGADGSSLEGFFELANGCICCSVKSDLLATLEILVQRKSQFDYVLIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKHIGRHLRXXXXXXXXXXXXXXXXXXXSTENGKQGQKWISPSQGAALKSEEGNTQHEPFLPPSSTTLTGKTNCHREEAYQQICVADRILLNKTDLVTE-ADLSKLEAELRGLNGMARIQRTNFSKIDLDFVLGLDCYGARKKDDVSLPFLNVCGAEHVHGGNEEGRRD--DEVRTVAWVEGVEVKVEAVKQWLAELLWRDDXXXXXXXXXXXXXXXXXXXIYRMKGTLAVAGSEVLHILQAVHETFELEPSQTLVGEGDKGEGGEERRGGKECRLVVIGKGLDEGHLRAGFLATA 567 ++K +PVT+++GFLGAGKTTLLNYILTQ HGKRIAVIENEFG+ +G+ES IA+DGADG + F+EL NGCICC+V+ DL++TLE L+ R+ +FDYVL+ET+G+ADPG +AS WVD ELE ++ LDGIVTVVDAK++ H L G R+EA QI ADRIL+NK DL+ D + LEA+L +N +A T S IDLD +L + + + + DV +++ N+ D +V T + V AV++WL LLW YR+KG +AVA ILQ V + FEL PS+ GEE E ++V IG L L+AG A A Sbjct: 1 MTKQVPVTVLTGFLGAGKTTLLNYILTQDHGKRIAVIENEFGEEIGVESLIARDGADGETFADFYELNNGCICCAVRDDLVSTLEELLTRRDRFDYVLVETTGMADPGKLASIFWVDTELEGRIVLDGIVTVVDAKNVMHH------------------------------------------------------------LNGSETSQRQEALSQIAYADRILINKADLMPALEDRAALEAQLHSINAIAPCLWTERSVIDLDTILNVQAFSSERAMDVE---------QYLTATNQSVAADHAQQVSTTCVRSRTPISVAAVERWLGTLLWE------------APEGDDASYFYRIKGVVAVADDHRKFILQGVQDLFELTPSE---------PWGEE---APETKIVFIGLRLQPAALQAGLEAAA 337
BLAST of NO08G01960 vs. NCBI_GenBank
Match: XP_008621186.1 (hypothetical protein SDRG_16747 [Saprolegnia diclina VS20] >EQC25384.1 hypothetical protein SDRG_16747 [Saprolegnia diclina VS20]) HSP 1 Score: 258.1 bits (658), Expect = 6.600e-65 Identity = 160/428 (37.38%), Postives = 224/428 (52.34%), Query Frame = 0 Query: 140 ISKIIPVTIISGFLGAGKTTLLNYILTQPHGKRIAVIENEFGQGLGIESAIAKDGADGSSLEGFFELANGCICCSVKSDLLATLEILVQRKSQFDYVLIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKHIGRHLRXXXXXXXXXXXXXXXXXXXSTENGKQGQKWISPSQGAALKSEEGNTQHEPFLPPSSTTLTGKTNCHREEAYQQICVADRILLNKTDLV-TEADLSKLEAELRGLNGMARIQRTNFSKIDLDFVLGLDCYGARKKDDVSLPFLNVCGAEHVHGGNEEGRRDDEVRTVAWVEGVEVKVEAVKQWLAELLWRDDXXXXXXXXXXXXXXXXXXXIYRMKGTLAVAGSEVLHILQAVHETFELEPSQTLVGEGDKGEGGEERRGGKECRLVVIGKGLDEGHLRAGFLATA 567 ++K +PVT+++GFLGAGKTTLLNYILTQ HGKRIAVIENEFG+ +G+ES IA+DGADG + F+EL NGCICC+V+ DL++TLE L+ R+ +FDYVL+ET+G+ADPG +AS WVD ELE ++ LDGIVTVVDAK++ HL + + GQ R+EA QI ADRIL+NK DLV + D LEA+L G+N +A + T S+IDLD +L + + + + DV A + ++ R +V T V + A+++WL LLW + YR+KG ++V + ILQ V + FEL PS+ + + +++ IG L L AG L+ + Sbjct: 1 MTKQVPVTVLTGFLGAGKTTLLNYILTQNHGKRIAVIENEFGEEIGVESLIARDGADGETFADFYELNNGCICCAVRDDLVSTLEELLTRRDRFDYVLVETTGMADPGKLASIFWVDTELEGRIVLDGIVTVVDAKNVALHL----------------------DGDEHGQ--------------------------------------RQEALSQIAYADRILINKADLVPSMTDRDALEAQLHGINAIAPLIWTERSQIDLDAILNVQAFSSERALDVE----RFLAATNQTVSSDHAR---QVSTYCIRSDASVTIAAMERWLGSLLWESE---------------ESSHYYRIKGIVSVVDDDRKFILQGVQDLFELTPSEPWAVDEP-----------RVTKIIFIGLELQPEMLEAGLLSAS 335
BLAST of NO08G01960 vs. NCBI_GenBank
Match: XP_012198894.1 (hypothetical protein SPRG_04990 [Saprolegnia parasitica CBS 223.65] >KDO30196.1 hypothetical protein SPRG_04990 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 257.3 bits (656), Expect = 1.100e-64 Identity = 153/385 (39.74%), Postives = 210/385 (54.55%), Query Frame = 0 Query: 140 ISKIIPVTIISGFLGAGKTTLLNYILTQPHGKRIAVIENEFGQGLGIESAIAKDGADGSSLEGFFELANGCICCSVKSDLLATLEILVQRKSQFDYVLIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKHIGRHLRXXXXXXXXXXXXXXXXXXXSTENGKQGQKWISPSQGAALKSEEGNTQHEPFLPPSSTTLTGKTNCHREEAYQQICVADRILLNKTDLV-TEADLSKLEAELRGLNGMARIQRTNFSKIDLDFVLGLDCYGARKKDDVSLPFLNVCGAEHVHGGNEEGRRDDEVRTVAWVEGVEVKVEAVKQWLAELLWRDDXXXXXXXXXXXXXXXXXXXIYRMKGTLAVAGSEVLHILQAVHETFELEPSQ 524 ++K +PVT+++GFLGAGKTTLLNYILTQ HGKRIAVIENEFG+ +G+ES IA+DGADG + F+EL NGCICC+V+ DL++TLE L+ R+ +FDYVL+ET+G+ADPG +AS WVD ELE ++ LDGI+TVVDAK++ HL + + GQ R+EA QI ADRIL+NK DLV + D LEA+L G+N +A + T S+IDLD +L + + + + DV A + ++ R +V T V + A+++WL LLW + YR+KG ++V E ILQ V + FEL PS+ Sbjct: 1 MTKQVPVTVLTGFLGAGKTTLLNYILTQNHGKRIAVIENEFGEEIGVESLIARDGADGETFADFYELNNGCICCAVRDDLVSTLEELLTRRDRFDYVLVETTGMADPGKLASIFWVDTELEGRIVLDGIITVVDAKNVALHL----------------------DGDEHGQ--------------------------------------RQEALSQIAYADRILINKADLVPSTTDREALEAQLHGINAIAPLIWTERSQIDLDAILNVQAFSSERALDVE----RFLAATNQTVSSDHAR---QVSTYCIRSDAPVTIAAMERWLGHLLWESE---------------ESSHYYRIKGIVSVVDDERKFILQGVQDLFELTPSE 303
BLAST of NO08G01960 vs. NCBI_GenBank
Match: KUF88115.1 (COBW domain-containing protein 1 [Phytophthora nicotianae]) HSP 1 Score: 250.8 bits (639), Expect = 1.000e-62 Identity = 157/438 (35.84%), Postives = 228/438 (52.05%), Query Frame = 0 Query: 143 IIPVTIISGFLGAGKTTLLNYILTQPHGKRIAVIENEFGQGLGIESAIAKDGADGSSLEGFFELANGCICCSVKSDLLATLEILVQRKSQFDYVLIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKHIGRHLRXXXXXXXXXXXXXXXXXXXSTENGKQGQKWISPSQGAALKSEEGNTQHEPFLPPSSTTLTGKTNCHREEAYQQICVADRILLNKTDLVTEADLS-KLEAELRGLNGMARIQRTNFSKIDLDFVLGLDCYGARKKDDVSLPFLNVCGAEHVHGGNEEGRRDDEVR-----------TVAWVEGVEVKVEAVKQWLAELLWRDDXXXXXXXXXXXXXXXXXXXIYRMKGTLAVAGSEVLHILQAVHETFELEPSQTLVGEGDKGEGGEERRGGKECRLVVIGKGLDEGHLRAGFLATAVS 569 +IPVTI+SGFLGAGKTTLL +IL+ HGKRIAVIENEFG+ +G+ES +AKDGA G ++GF+EL+NGC+CCSV+ DL+ TLE L++R+ +FDY+++ET+G+ADPG VAS WVD+ELE ++ LDGIVT+VD+ + HL +TQ EA Q+ ADRILLNK DLV + + ++E + +NGMA ++ T S+++LD +L + + + + V LN AE G++ +DE T + + E +++WL ELLW D ++R+KG +A+AG ILQAVHE FE+ S+ E + + + ++V IG L +G L AG + V+ Sbjct: 23 MIPVTILSGFLGAGKTTLLRFILSASHGKRIAVIENEFGEEIGVESLVAKDGAGGDVMDGFYELSNGCVCCSVRDDLVNTLEKLLERRDRFDYIVVETTGMADPGKVASVFWVDDELEGRIFLDGIVTLVDSPRLNFHL------------------------------------------NHPDTQ--------------------REAAAQLAYADRILLNKGDLVPDKEQRLEIEQTVTQVNGMASVRWTERSRVNLDDILNIKSFTTSRAEQVEKE-LNTLLAEGKEEGHDHDNCNDESHDHATHTGGMQTTCVRIRDGPLDQEKLERWLGELLWEQD-EDVDAEIKPGSEAATRQKLFRVKGVVAIAGETNKFILQAVHELFEVYASEERWTEDELNS-----KDSRVTQVVFIGLHLRKGELEAGLRSCVVT 391
BLAST of NO08G01960 vs. NCBI_GenBank
Match: KUF92795.1 (hypothetical protein AM588_10007630 [Phytophthora nicotianae]) HSP 1 Score: 250.8 bits (639), Expect = 1.000e-62 Identity = 157/438 (35.84%), Postives = 228/438 (52.05%), Query Frame = 0 Query: 143 IIPVTIISGFLGAGKTTLLNYILTQPHGKRIAVIENEFGQGLGIESAIAKDGADGSSLEGFFELANGCICCSVKSDLLATLEILVQRKSQFDYVLIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKHIGRHLRXXXXXXXXXXXXXXXXXXXSTENGKQGQKWISPSQGAALKSEEGNTQHEPFLPPSSTTLTGKTNCHREEAYQQICVADRILLNKTDLVTEADLS-KLEAELRGLNGMARIQRTNFSKIDLDFVLGLDCYGARKKDDVSLPFLNVCGAEHVHGGNEEGRRDDEVR-----------TVAWVEGVEVKVEAVKQWLAELLWRDDXXXXXXXXXXXXXXXXXXXIYRMKGTLAVAGSEVLHILQAVHETFELEPSQTLVGEGDKGEGGEERRGGKECRLVVIGKGLDEGHLRAGFLATAVS 569 +IPVTI+SGFLGAGKTTLL +IL+ HGKRIAVIENEFG+ +G+ES +AKDGA G ++GF+EL+NGC+CCSV+ DL+ TLE L++R+ +FDY+++ET+G+ADPG VAS WVD+ELE ++ LDGIVT+VD+ + HL +TQ EA Q+ ADRILLNK DLV + + ++E + +NGMA ++ T S+++LD +L + + + + V LN AE G++ +DE T + + E +++WL ELLW D ++R+KG +A+AG ILQAVHE FE+ S+ E + + + ++V IG L +G L AG + V+ Sbjct: 23 MIPVTILSGFLGAGKTTLLRFILSASHGKRIAVIENEFGEEIGVESLVAKDGAGGDVMDGFYELSNGCVCCSVRDDLVNTLEKLLERRDRFDYIVVETTGMADPGKVASVFWVDDELEGRIFLDGIVTLVDSPRLNFHL------------------------------------------NHPDTQ--------------------REAAAQLAYADRILLNKGDLVPDKEQRLEIEQTVTQVNGMASVRWTERSRVNLDDILNIKSFTTSRAEQVEKE-LNTLLAEGKEEGHDHDNCNDESHDHATHTGGMQTTCVRIRDGPLDQEKLERWLGELLWEQD-EDVDAEIKPGSEAATRQKLFRVKGVVAIAGETNKFILQAVHELFEVYASEERWTEDELNS-----KDSRVTQVVFIGLHLRKGELEAGLRSCVVT 391
BLAST of NO08G01960 vs. NCBI_GenBank
Match: ETI52186.1 (hypothetical protein F443_04635 [Phytophthora parasitica P1569] >ETK92060.1 hypothetical protein L915_04511 [Phytophthora parasitica] >ETL98624.1 hypothetical protein L917_04354 [Phytophthora parasitica] >ETP49906.1 hypothetical protein F442_04684 [Phytophthora parasitica P10297]) HSP 1 Score: 249.2 bits (635), Expect = 3.100e-62 Identity = 156/438 (35.62%), Postives = 227/438 (51.83%), Query Frame = 0 Query: 143 IIPVTIISGFLGAGKTTLLNYILTQPHGKRIAVIENEFGQGLGIESAIAKDGADGSSLEGFFELANGCICCSVKSDLLATLEILVQRKSQFDYVLIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKHIGRHLRXXXXXXXXXXXXXXXXXXXSTENGKQGQKWISPSQGAALKSEEGNTQHEPFLPPSSTTLTGKTNCHREEAYQQICVADRILLNKTDLVTEADLS-KLEAELRGLNGMARIQRTNFSKIDLDFVLGLDCYGARKKDDVSLPFLNVCGAEHVHGGNEEGRRDDEVR-----------TVAWVEGVEVKVEAVKQWLAELLWRDDXXXXXXXXXXXXXXXXXXXIYRMKGTLAVAGSEVLHILQAVHETFELEPSQTLVGEGDKGEGGEERRGGKECRLVVIGKGLDEGHLRAGFLATAVS 569 +IPVTI+SGFLGAGKTTLL +IL+ HGKRIAVIENEFG+ +G+ES +AKDGA G ++GF+EL+NGC+CCSV+ DL+ TLE L++R+ +FDY+++ET+G+ADPG VAS WVD+ELE ++ LDGIVT+VD+ + HL +TQ EA Q+ ADRILLNK DLV + + ++E + +NGMA ++ T S+++LD +L + + + + V LN AE G++ +DE T + + E +++WL ELLW D ++R+KG +A+AG ILQAVHE FE+ S+ E + + + ++V IG L +G L G + V+ Sbjct: 23 MIPVTILSGFLGAGKTTLLRFILSASHGKRIAVIENEFGEEIGVESLVAKDGAGGDVMDGFYELSNGCVCCSVRDDLVNTLEKLLERRDRFDYIVVETTGMADPGKVASVFWVDDELEGRIFLDGIVTLVDSPRLNFHL------------------------------------------NHPDTQ--------------------REAAAQLAYADRILLNKGDLVPDKEQRLEIEQTVTQVNGMASVRWTERSRVNLDDILNIKSFTTSRAEQVEKE-LNTLLAEGKEEGHDHDNCNDESHDHATHTGGMQTTCVRIRDGPLDQEKLERWLGELLWEQD-EDVDVEIKPGSEAATRQKLFRVKGVVAIAGETNKFILQAVHELFEVYASEERWTEDELNS-----KDSRVTQVVFIGLHLRKGELEVGLRSCVVT 391
BLAST of NO08G01960 vs. NCBI_GenBank
Match: ETM51792.1 (hypothetical protein L914_04455 [Phytophthora parasitica] >ETO80948.1 hypothetical protein F444_04670 [Phytophthora parasitica P1976]) HSP 1 Score: 249.2 bits (635), Expect = 3.100e-62 Identity = 156/438 (35.62%), Postives = 227/438 (51.83%), Query Frame = 0 Query: 143 IIPVTIISGFLGAGKTTLLNYILTQPHGKRIAVIENEFGQGLGIESAIAKDGADGSSLEGFFELANGCICCSVKSDLLATLEILVQRKSQFDYVLIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKHIGRHLRXXXXXXXXXXXXXXXXXXXSTENGKQGQKWISPSQGAALKSEEGNTQHEPFLPPSSTTLTGKTNCHREEAYQQICVADRILLNKTDLVTEADLS-KLEAELRGLNGMARIQRTNFSKIDLDFVLGLDCYGARKKDDVSLPFLNVCGAEHVHGGNEEGRRDDEVR-----------TVAWVEGVEVKVEAVKQWLAELLWRDDXXXXXXXXXXXXXXXXXXXIYRMKGTLAVAGSEVLHILQAVHETFELEPSQTLVGEGDKGEGGEERRGGKECRLVVIGKGLDEGHLRAGFLATAVS 569 +IPVTI+SGFLGAGKTTLL +IL+ HGKRIAVIENEFG+ +G+ES +AKDGA G ++GF+EL+NGC+CCSV+ DL+ TLE L++R+ +FDY+++ET+G+ADPG VAS WVD+ELE ++ LDGIVT+VD+ + HL +TQ EA Q+ ADRILLNK DLV + + ++E + +NGMA ++ T S+++LD +L + + + + V LN AE G++ +DE T + + E +++WL ELLW D ++R+KG +A+AG ILQAVHE FE+ S+ E + + + ++V IG L +G L G + V+ Sbjct: 23 MIPVTILSGFLGAGKTTLLRFILSASHGKRIAVIENEFGEEIGVESLVAKDGAGGDVMDGFYELSNGCVCCSVRDDLVNTLEKLLERRDRFDYIVVETTGMADPGKVASVFWVDDELEGRIFLDGIVTLVDSPRLNFHL------------------------------------------NHPDTQ--------------------REAAAQLAYADRILLNKGDLVPDKEQRLEIEQTVTQVNGMASVRWTERSRVNLDDILNIKSFTTSRAEQVEKE-LNTLLAEGKEEGHDHDNCNDESHDHATHTGGMQTTCVRIRDGPLDQEKLERWLGELLWEQD-EDVDAEIKPGSEAATRQKLFRVKGVVAIAGETNKFILQAVHELFEVYASEERWTEDELNS-----KDSRVTQVVFIGLHLRKGELEVGLRSCVVT 391
BLAST of NO08G01960 vs. NCBI_GenBank
Match: XP_008901926.1 (hypothetical protein PPTG_08930 [Phytophthora parasitica INRA-310] >ETN12919.1 hypothetical protein PPTG_08930 [Phytophthora parasitica INRA-310]) HSP 1 Score: 249.2 bits (635), Expect = 3.100e-62 Identity = 156/438 (35.62%), Postives = 227/438 (51.83%), Query Frame = 0 Query: 143 IIPVTIISGFLGAGKTTLLNYILTQPHGKRIAVIENEFGQGLGIESAIAKDGADGSSLEGFFELANGCICCSVKSDLLATLEILVQRKSQFDYVLIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKHIGRHLRXXXXXXXXXXXXXXXXXXXSTENGKQGQKWISPSQGAALKSEEGNTQHEPFLPPSSTTLTGKTNCHREEAYQQICVADRILLNKTDLVTEADLS-KLEAELRGLNGMARIQRTNFSKIDLDFVLGLDCYGARKKDDVSLPFLNVCGAEHVHGGNEEGRRDDEVR-----------TVAWVEGVEVKVEAVKQWLAELLWRDDXXXXXXXXXXXXXXXXXXXIYRMKGTLAVAGSEVLHILQAVHETFELEPSQTLVGEGDKGEGGEERRGGKECRLVVIGKGLDEGHLRAGFLATAVS 569 +IPVTI+SGFLGAGKTTLL +IL+ HGKRIAVIENEFG+ +G+ES +AKDGA G ++GF+EL+NGC+CCSV+ DL+ TLE L++R+ +FDY+++ET+G+ADPG VAS WVD+ELE ++ LDGIVT+VD+ + HL +TQ EA Q+ ADRILLNK DLV + + ++E + +NGMA ++ T S+++LD +L + + + + V LN AE G++ +DE T + + E +++WL ELLW D ++R+KG +A+AG ILQAVHE FE+ S+ E + + + ++V IG L +G L G + V+ Sbjct: 23 MIPVTILSGFLGAGKTTLLRFILSASHGKRIAVIENEFGEEIGVESLVAKDGAGGDVMDGFYELSNGCVCCSVRDDLVNTLEKLLERRDRFDYIVVETTGMADPGKVASVFWVDDELEGRIFLDGIVTLVDSPRLNFHL------------------------------------------NHPDTQ--------------------REAAAQLAYADRILLNKGDLVPDKEQRLEIEQTVTQVNGMASVRWTERSRVNLDDILNIKSFTTSRAEQVEKE-LNTLLAEGKEEGHDHDNCNDESHDHATHTGGMQTTCVRIRDGPLDQEKLERWLGELLWEQD-EDVDAEIKPGSEAATRQKLFRVKGVVAIAGETNKFILQAVHELFEVYASEERWTEDELNS-----KDSRVTQVVFIGLHLRKGELEVGLRSCVVT 391 The following BLAST results are available for this feature:
BLAST of NO08G01960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G01960 ID=NO08G01960|Name=NO08G01960|organism=Nannochloropsis oceanica|type=gene|length=4863bpback to top protein sequence of NO08G01960.1 >NO08G01960.1-protein ID=NO08G01960.1-protein|Name=NO08G01960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=572bpback to top Synonyms
Publications
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