NO08G01140, NO08G01140 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G01140 vs. NCBI_GenBank
Match: EWM26760.1 (heat shock protein hsp20 [Nannochloropsis gaditana]) HSP 1 Score: 266.9 bits (681), Expect = 5.100e-68 Identity = 142/210 (67.62%), Postives = 165/210 (78.57%), Query Frame = 0 Query: 1 MLRYLSRPLVHAARTTTAG---AHAQPPLALRRLSSRSIGRSVAGRQGGGGSTGQVMPRGQSGPPLASLGRFFDDFGMDVFNDPFFRPFLARGPGSSLEAADVSMGLDIAETDKEYVVKAELPGVKKEDIKVTFQEGILNIAAERKCEEVKEDERTQRHYSDFAYGKVSRSLRVPDAAEKDQVDAHLEDGVLTVKIAKGEHSKPKEIEVK 208 M+R R L HA R T+ QP L +R LSSR+ RSVA R G G GQV+ RG GPP A+LGR FDD GM+VFNDPFFRPF ARGPG ++EAA+V+MGLDIAET+KEY+VKAELPGVKKED+KVTF +G+LNI+AERK E EDE ++HYSDFAYGKVSRSLRVPDAAEKD VDAHLEDGVLTVK+ KGE SKP++I +K Sbjct: 16 MMRQSCRSLGHAGRAVTSAYSYRTTQPALPVRCLSSRAT-RSVAPR-GSGNRHGQVVSRGPGGPPWANLGRIFDDMGMEVFNDPFFRPFFARGPGGAMEAAEVAMGLDIAETEKEYIVKAELPGVKKEDVKVTFHDGVLNISAERKQEAAGEDEHHRQHYSDFAYGKVSRSLRVPDAAEKDHVDAHLEDGVLTVKVKKGEDSKPQDIPIK 223
BLAST of NO08G01140 vs. NCBI_GenBank
Match: WP_020494518.1 (Hsp20/alpha crystallin family protein [Verrucomicrobium sp. 3C]) HSP 1 Score: 112.1 bits (279), Expect = 2.100e-21 Identity = 58/121 (47.93%), Postives = 79/121 (65.29%), Query Frame = 0 Query: 87 LARGPGSSLEAADVSMGLDIAETDKEYVVKAELPGVKKEDIKVTFQEGILNIAAERKCEEVKEDERTQRHYSDFAYGKVSRSLRVPDAAEKDQVDAHLEDGVLTVKIAKGEHSKPKEIEVK 208 L P LE A+ DI E DKEY+VK ELPG+K+E++KV+ + G+L I+ ERK E KE++ + H + AYG SRS +PD D++DA ++GVL V + KGEH+KPK IEVK Sbjct: 38 LLEAPSERLEIAEWRPLADITEDDKEYLVKLELPGMKREEVKVSMESGVLTISGERKLE--KEEKDKKYHRVERAYGSFSRSFVIPDEVVVDKIDAQFKEGVLQVHLPKGEHAKPKTIEVK 156
BLAST of NO08G01140 vs. NCBI_GenBank
Match: WP_024807259.1 (Hsp20/alpha crystallin family protein [Verrucomicrobia bacterium LP2A]) HSP 1 Score: 108.6 bits (270), Expect = 2.300e-20 Identity = 54/121 (44.63%), Postives = 79/121 (65.29%), Query Frame = 0 Query: 87 LARGPGSSLEAADVSMGLDIAETDKEYVVKAELPGVKKEDIKVTFQEGILNIAAERKCEEVKEDERTQRHYSDFAYGKVSRSLRVPDAAEKDQVDAHLEDGVLTVKIAKGEHSKPKEIEVK 208 L P LE A+ DI E DKEY+VK E+PG+K++++KV+ + G+L I+ ERK E KE++ + H + AYG SRS +PD +++DA ++G+L V + KGEH+KPK IEVK Sbjct: 38 LLEAPSERLELAEWRPLADITEDDKEYLVKIEIPGMKRDEVKVSMESGVLTISGERKLE--KEEKSKKYHRVERAYGSFSRSFVIPDDVVAEKIDAEFKEGILQVHLPKGEHAKPKTIEVK 156
BLAST of NO08G01140 vs. NCBI_GenBank
Match: OGS75279.1 (heat-shock protein Hsp20 [Gallionellales bacterium GWA2_55_18]) HSP 1 Score: 108.2 bits (269), Expect = 3.100e-20 Identity = 56/112 (50.00%), Postives = 78/112 (69.64%), Query Frame = 0 Query: 95 LEAADVSMGLDIAETDKEYVVKAELPGVKKEDIKVTFQEGILNIAAERKCEEVKEDERTQRHYSDFAYGKVSRSLRVPDAAEKDQVDAHLEDGVLTVKIAKGEHSKPKEIEV 207 L AD + +DI+ETD Y+VKAE+PGVKKED+KVT Q+G+L + ERK E KE++ + H + YG +RS RVPD A+++ V A +DGVL V ++K E +KPK+I V Sbjct: 37 LAVADWAPSVDISETDTAYLVKAEIPGVKKEDVKVTIQDGMLTLQGERKQE--KEEKGKKFHRIERCYGSFARSFRVPDDADENSVKAEFKDGVLNVTLSKSEKAKPKQINV 146
BLAST of NO08G01140 vs. NCBI_GenBank
Match: WP_090893594.1 (Hsp20/alpha crystallin family protein [Candidatus Nitrospira nitrificans] >CUS31355.1 Heat shock protein, Hsp20 family [Candidatus Nitrospira nitrificans]) HSP 1 Score: 106.3 bits (264), Expect = 1.200e-19 Identity = 59/133 (44.36%), Postives = 85/133 (63.91%), Query Frame = 0 Query: 76 DVFNDPFFRPFLARGPG-SSLEAADVSMGLDIAETDKEYVVKAELPGVKKEDIKVTFQEGILNIAAERKCEEVKEDERTQRHYSDFAYGKVSRSLRVPDAAEKDQVDAHLEDGVLTVKIAKGEHSKPKEIEVK 208 D N F RP AR G ++ AD + +DI+ET+ EY +KAE+P VKKED+KVT ++G+L I ERK E KE++ + H + +YG R+ +PD E+++V A +DGVL + + K E +KPK IEVK Sbjct: 17 DRLNRMFARPAAARTNGKETMIVADWTPSVDISETEGEYQIKAEIPDVKKEDVKVTLEDGVLTIQGERKHE--KEEKGKKFHRIERSYGSFVRTFSLPDVIEEEKVKAEFKDGVLNLHLPKSEKAKPKAIEVK 147
BLAST of NO08G01140 vs. NCBI_GenBank
Match: OQW33564.1 (heat-shock protein Hsp20 [Nitrospira sp. SG-bin1]) HSP 1 Score: 106.3 bits (264), Expect = 1.200e-19 Identity = 59/133 (44.36%), Postives = 85/133 (63.91%), Query Frame = 0 Query: 76 DVFNDPFFRPFLARGPG-SSLEAADVSMGLDIAETDKEYVVKAELPGVKKEDIKVTFQEGILNIAAERKCEEVKEDERTQRHYSDFAYGKVSRSLRVPDAAEKDQVDAHLEDGVLTVKIAKGEHSKPKEIEVK 208 D N F RP +R G ++ AD + +DI+ET+ EY +KAE+P VKKED+KVT ++G+L I ERK E KE++ + H + +YG RS +PD E+++V A +DGVL + + K E +KPK IEVK Sbjct: 17 DRLNRMFARPAASRTNGKETMIVADWTPSVDISETEGEYQIKAEIPDVKKEDVKVTLEDGVLTIQGERKHE--KEEKGKKFHRIERSYGSFVRSFSLPDVIEEEKVKAEFKDGVLNLHLPKSEKAKPKAIEVK 147
BLAST of NO08G01140 vs. NCBI_GenBank
Match: OLB64836.1 (heat-shock protein Hsp20 [Nitrospirae bacterium 13_2_20CM_2_61_4]) HSP 1 Score: 105.9 bits (263), Expect = 1.500e-19 Identity = 57/118 (48.31%), Postives = 78/118 (66.10%), Query Frame = 0 Query: 90 GPGSSLEAADVSMGLDIAETDKEYVVKAELPGVKKEDIKVTFQEGILNIAAERKCEEVKEDERTQRHYSDFAYGKVSRSLRVPDAAEKDQVDAHLEDGVLTVKIAKGEHSKPKEIEVK 208 G S+ A+ S +DI E DKEY++K ELP VKK+D+KVT + G+L I ERK E KE++ + H + AYG RS +PD A+ ++V+A +DGVL V +AK E +KPK IEVK Sbjct: 34 GEQESMTIAEWSPLVDITEDDKEYLIKTELPEVKKDDVKVTVENGVLTITGERKFE--KEEKGRKYHRVERAYGNFVRSFTLPDDADANKVNAEFKDGVLKVHVAKSEAAKPKHIEVK 149
BLAST of NO08G01140 vs. NCBI_GenBank
Match: WP_009965293.1 (Hsp20/alpha crystallin family protein [Verrucomicrobium spinosum]) HSP 1 Score: 105.5 bits (262), Expect = 2.000e-19 Identity = 55/118 (46.61%), Postives = 77/118 (65.25%), Query Frame = 0 Query: 90 GPGSSLEAADVSMGLDIAETDKEYVVKAELPGVKKEDIKVTFQEGILNIAAERKCEEVKEDERTQRHYSDFAYGKVSRSLRVPDAAEKDQVDAHLEDGVLTVKIAKGEHSKPKEIEVK 208 G +L A+ + +DI E DKEYV+KAELP +KKED+KVT G L +A +RK E KE+E + H + +YG RS +PDA + +V+A +DG+LTV + K E +KPK +EVK Sbjct: 40 GAKEALTVAEWAPPVDITEDDKEYVIKAELPEIKKEDVKVTVTNGELTLAGQRKFE--KEEEGKKYHRVERSYGSFLRSFTLPDAVDATKVEAQFKDGILTVHLPKDERAKPKSVEVK 155
BLAST of NO08G01140 vs. NCBI_GenBank
Match: SPE58858.1 (Heat shock protein, Hsp20 family [Verrucomicrobia bacterium]) HSP 1 Score: 104.4 bits (259), Expect = 4.400e-19 Identity = 58/118 (49.15%), Postives = 78/118 (66.10%), Query Frame = 0 Query: 90 GPGSSLEAADVSMGLDIAETDKEYVVKAELPGVKKEDIKVTFQEGILNIAAERKCEEVKEDERTQRHYSDFAYGKVSRSLRVPDAAEKDQVDAHLEDGVLTVKIAKGEHSKPKEIEVK 208 G L A+ + +DI+E DKEY++KAELP VKKED+KVT +EG L I ERK E KE++ + H + AYG RS +PD A +V A +DGVLTV +AK + +KP++IEVK Sbjct: 34 GQEEPLAVAEWAPLVDISEDDKEYLIKAELPEVKKEDVKVTAEEGTLTIMGERKFE--KEEKGKKYHRVERAYGSFGRSFSLPDDASPAKVTADFKDGVLTVHLAKTQRAKPQQIEVK 149
BLAST of NO08G01140 vs. NCBI_GenBank
Match: OLB59484.1 (heat-shock protein Hsp20 [Nitrospirae bacterium 13_2_20CM_2_61_4]) HSP 1 Score: 104.0 bits (258), Expect = 5.800e-19 Identity = 54/130 (41.54%), Postives = 83/130 (63.85%), Query Frame = 0 Query: 78 FNDPFFRPFLARGPGSSLEAADVSMGLDIAETDKEYVVKAELPGVKKEDIKVTFQEGILNIAAERKCEEVKEDERTQRHYSDFAYGKVSRSLRVPDAAEKDQVDAHLEDGVLTVKIAKGEHSKPKEIEVK 208 F+ F +PF + + + DI E +KEY++KAELP +KKED+KVT + G+L I+ ERK E KE+++ + H + YG RS +PD A+ +V+A ++G+LTV + K EH+KPK+I+VK Sbjct: 21 FSTLFGQPFRRTNGREEITLPEWTPLADITEDEKEYLIKAELPEMKKEDVKVTVENGVLTISGERKFE--KEEKKKKYHRVERGYGTFMRSFTLPDDADFSKVNAEFKNGLLTVHVPKSEHAKPKQIDVK 148 The following BLAST results are available for this feature:
BLAST of NO08G01140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G01140 ID=NO08G01140|Name=NO08G01140|organism=Nannochloropsis oceanica|type=gene|length=1165bpback to top protein sequence of NO08G01140.1 >NO08G01140.1-protein ID=NO08G01140.1-protein|Name=NO08G01140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=208bpback to top Synonyms
Publications
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