NO07G01520, NO07G01520 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G01520 vs. NCBI_GenBank
Match: XP_005855272.1 (translocase of inner mitochondrial membrane 50-like protein [Nannochloropsis gaditana CCMP526] >EKU21097.1 translocase of inner mitochondrial membrane 50-like protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 505.8 bits (1301), Expect = 1.400e-139 Identity = 244/334 (73.05%), Postives = 273/334 (81.74%), Query Frame = 0 Query: 111 LKLIGGSVAAGGAYLFYQTSTTDQSIDDVLRASPVGFPYAWLYDSVFSPFINPSREKLLPDWHSIPNIPPDAPCPPTLVLDLEDTLVHATWDPKFGWRYAKRPGVDRFLQDLSKYYEIVLFSPSNFGVVDPITWTLDKQGLIMHRLYKDSTRFYQGKHIKDLSKLNRDLRKVVIIDDDPDAFRFQPQNGIRIKPFKDPKDKADSSLDKLRAFLLALVMEGVADDIPGVLRQFQGLDADQIGDAYKSMLRQAQIKEMERHQKGLGGLLRSQKAFQSIGHPLSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMVVPDEIKQSAPPRRGR 445 +KL+ AAG AY+ Y+TS D+S DDVLRASP+G PYAWLYD+VFSPF+NPSREKLLPDWHSIPNIPPDAPCPPTLVLDLEDTLVHATWDPK+GWRYAKRPGVDR LQDLSKYYEIVLFSPSNFGVVDPITWTLDKQGLIMHRLYKDSTRF+QGKH+KDLSKLNRDLRKVVI+DDDP+AF+FQP+NGIRIKPF++ KDKAD SL+KLR FLLALVMEGVADDIP VLRQFQGLDA+QIGDAY SMLR+AQ++E+E+ Q+GLGGLLRS +AFQS+GH L A VPD+ Q+ PPR GR Sbjct: 56 IKLLATGGAAGVAYVVYETSAGDKSTDDVLRASPLGRPYAWLYDAVFSPFVNPSREKLLPDWHSIPNIPPDAPCPPTLVLDLEDTLVHATWDPKYGWRYAKRPGVDRLLQDLSKYYEIVLFSPSNFGVVDPITWTLDKQGLIMHRLYKDSTRFHQGKHVKDLSKLNRDLRKVVIVDDDPEAFQFQPENGIRIKPFRNAKDKADRSLEKLRGFLLALVMEGVADDIPAVLRQFQGLDAEQIGDAYASMLRRAQVREIEKQQRGLGGLLRSGRAFQSMGHGLPGNAARSPAAPTRLSAKDIVGEPMGESAQPNSTVAAAAAVPDQPHQTPPPRPGR 389
BLAST of NO07G01520 vs. NCBI_GenBank
Match: EWM27179.1 (mitochondrial import inner membrane translocase subunit tim50 [Nannochloropsis gaditana]) HSP 1 Score: 505.8 bits (1301), Expect = 1.400e-139 Identity = 244/334 (73.05%), Postives = 273/334 (81.74%), Query Frame = 0 Query: 111 LKLIGGSVAAGGAYLFYQTSTTDQSIDDVLRASPVGFPYAWLYDSVFSPFINPSREKLLPDWHSIPNIPPDAPCPPTLVLDLEDTLVHATWDPKFGWRYAKRPGVDRFLQDLSKYYEIVLFSPSNFGVVDPITWTLDKQGLIMHRLYKDSTRFYQGKHIKDLSKLNRDLRKVVIIDDDPDAFRFQPQNGIRIKPFKDPKDKADSSLDKLRAFLLALVMEGVADDIPGVLRQFQGLDADQIGDAYKSMLRQAQIKEMERHQKGLGGLLRSQKAFQSIGHPLSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMVVPDEIKQSAPPRRGR 445 +KL+ AAG AY+ Y+TS D+S DDVLRASP+G PYAWLYD+VFSPF+NPSREKLLPDWHSIPNIPPDAPCPPTLVLDLEDTLVHATWDPK+GWRYAKRPGVDR LQDLSKYYEIVLFSPSNFGVVDPITWTLDKQGLIMHRLYKDSTRF+QGKH+KDLSKLNRDLRKVVI+DDDP+AF+FQP+NGIRIKPF++ KDKAD SL+KLR FLLALVMEGVADDIP VLRQFQGLDA+QIGDAY SMLR+AQ++E+E+ Q+GLGGLLRS +AFQS+GH L A VPD+ Q+ PPR GR Sbjct: 110 IKLLATGGAAGVAYVVYETSAGDKSTDDVLRASPLGRPYAWLYDAVFSPFVNPSREKLLPDWHSIPNIPPDAPCPPTLVLDLEDTLVHATWDPKYGWRYAKRPGVDRLLQDLSKYYEIVLFSPSNFGVVDPITWTLDKQGLIMHRLYKDSTRFHQGKHVKDLSKLNRDLRKVVIVDDDPEAFQFQPENGIRIKPFRNAKDKADRSLEKLRGFLLALVMEGVADDIPAVLRQFQGLDAEQIGDAYASMLRRAQVREIEKQQRGLGGLLRSGRAFQSMGHGLPGNAARSPAAPTRLSAKDIVGEPMGESAQPNSTVAAAAAVPDQPHQTPPPRPGR 443
BLAST of NO07G01520 vs. NCBI_GenBank
Match: XP_002177133.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC51596.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 261.9 bits (668), Expect = 3.500e-66 Identity = 115/220 (52.27%), Postives = 164/220 (74.55%), Query Frame = 0 Query: 159 PFINPSREKLLPDWHSIPNIPPDAPCPPTLVLDLEDTLVHATWDPKFGWRYAKRPGVDRFLQDLSKYYEIVLFSPSNFGVVDPITWTLDKQGLIMHRLYKDSTRFYQGKHIKDLSKLNRDLRKVVIIDDDPDAFRFQPQNGIRIKPFKDPKDKADSSLDKLRAFLLALVMEGVADDIPGVLRQFQGLDADQIGDAYKSMLRQAQIKEMERHQKGLGGLLR 379 P P+ EKLLPDW +PN+P D P P TLVLDLE+TLV +TWD ++GWR+AKRPGVD+FL++L++YYEIVL+SPS G+ DP+ +LDK G IMHRLY+++T + G H+KDL++LNR L ++V+IDDDP +F P+N IR+KP+ DP D+ D++L+++ FL+ + EG +D+PG+LRQ++G+DADQI D + + + R Q+GLG L R Sbjct: 1 PLAKPAHEKLLPDWSQLPNVPQDIPVPHTLVLDLENTLVSSTWDRRYGWRHAKRPGVDKFLRELAQYYEIVLYSPSIDGIADPVVTSLDKDGCIMHRLYREATYYTGGVHVKDLNRLNRPLNRMVVIDDDPSEVQFNPENLIRVKPYADPTDRTDNTLERILPFLVEIAREGY-NDVPGLLRQYEGMDADQIADEQDRRIHELRTHRERRSQQGLGALAR 219
BLAST of NO07G01520 vs. NCBI_GenBank
Match: EJK76285.1 (hypothetical protein THAOC_01962, partial [Thalassiosira oceanica]) HSP 1 Score: 252.3 bits (643), Expect = 2.800e-63 Identity = 120/234 (51.28%), Postives = 164/234 (70.09%), Query Frame = 0 Query: 147 FPYAWLYDSVFSPFINPSREKLLPDWHSIPNIPPDAPCPPTLVLDLEDTLVHATWDPKFGWRYAKRPGVDRFLQDLSKYYEIVLFSPSNFGVVDPITWTLDKQGLIMHRLYKDSTRFYQGKHIKDLSKLNRDLRKVVIIDDDPDAFRFQPQNGIRIKPFKDPKDKADSSLDKLRAFLLALVMEGVADDIPGVLRQFQGLDADQIGDAYKSMLRQAQIKEMERHQKGLGGLLRSQ 381 F A L D V + P REKLLPDW+ IPN+PPD P PP LVLDLE TLV TWD KFGWRY+KRPGVD+FL L++YYEIVLF+PS G+ P+ +LD +G IMH LY++STR+ G H KDLS LNR+++K+V +DD+ A +FQP N I +K + DP D+ D +L+++ L+ + EG DDIPG+L+QF+G+DADQI D ++ + +I+ + Q+GLG ++ Sbjct: 104 FEMAGLKDMV-DDYAAPKREKLLPDWNQIPNVPPDMPPPPLLVLDLEHTLVAPTWDRKFGWRYSKRPGVDKFLSTLAQYYEIVLFTPSIDGLAGPVIASLDPKGYIMHHLYRESTRYVNGVHCKDLSSLNRNVKKIVALDDEKAALQFQPDNLICVKAYDDPADRDDDTLERILPLLIEISREGY-DDIPGLLQQFRGMDADQIADEHERRVNNLRIQNSQISQRGLGSFAHAR 335
BLAST of NO07G01520 vs. NCBI_GenBank
Match: XP_009035542.1 (hypothetical protein AURANDRAFT_24304, partial [Aureococcus anophagefferens] >EGB09478.1 hypothetical protein AURANDRAFT_24304, partial [Aureococcus anophagefferens]) HSP 1 Score: 243.0 bits (619), Expect = 1.700e-60 Identity = 117/223 (52.47%), Postives = 154/223 (69.06%), Query Frame = 0 Query: 159 PFINPSREKLLPDW-HSIPNIPPDAPCPPTLVLDLEDTLVHATWDPKFGWRYAKRPGVDRFLQDLSKYYEIVLFSPSNFGVVDPITWTLDKQGLIMHRLYKDSTRFYQGKHIKDLSKLNRDLRKVVIIDDDPDAFRFQPQNGIRIKPFKDPKDKADSSLDKLRAFLLALVMEGVADDIPGVLRQFQGLDADQIGDAYKSMLRQAQIKEMERHQKGLGGLLRSQ 381 PF+ PSREKLLPDW NI PD PCP TLVLDL+DTLV ATWD ++GWR+AKRPG ++FL++++KYYEIV+F+ + GV DP+ LDK G MHRLY+D+T F +G H KDLSKLNRD+RK+V++D D A + QP N I +KP+ D D+ D+ L+ L FL ALV E V D+P L +F DA + Y ML++A+ K + GLGG +R + Sbjct: 114 PFVQPSREKLLPDWPPDYLNISPDVPCPHTLVLDLDDTLVRATWDRRYGWRHAKRPGAEQFLREMAKYYEIVIFTTNIAGVADPVVHALDKDGCAMHRLYRDATMFVRGTHCKDLSKLNRDVRKIVVVDKDRAAVQLQPGNAIIVKPYTDATDRLDTELEDLTPFLAALVNENVR-DVPAALAKFSSNDATVVAAEYGDMLKEAKNKTDAVRKIGLGGFVRGR 335
BLAST of NO07G01520 vs. NCBI_GenBank
Match: GAX93509.1 (mitochondrial import inner membrane translocase subunit TIM50, partial [Pythium insidiosum]) HSP 1 Score: 241.9 bits (616), Expect = 3.800e-60 Identity = 126/278 (45.32%), Postives = 176/278 (63.31%), Query Frame = 0 Query: 110 ALKLIGGSVAAGGAYLFYQTSTTDQSIDDVLRASPVGFPY---AWLYDSVFSPFINPSREKLLPDWHSIPNIPPDAPCPPTLVLDLEDTLVHATWDPKFGWRYAKRPGVDRFLQDLSKYYEIVLFSPSNFGVVDPITWTLDKQGLIMHRLYKDSTRFYQGKHIKDLSKLNRDLRKVVIIDDDPDAFRFQPQNGIRIKPFKDPKDKADSSLDKLRAFLLALVMEGVADDIPGVLRQFQGLD--ADQIGDAYKSMLRQAQIKEMERHQKGLGGLLRSQKA 383 ++ L+ GS++ + F Q + D L A+P+G Y A + + P+ PS++KLLPDW IP +PPD P P LVLDLEDTLVH+ W K GWR+AKRPGVD FL+ L++YYEIV+FS ++ + D + LD++ ++H L ++STR+Y G H+KDLSKLNRDLR VVIIDDDP A++ QP+N I IKP+ D +D+ D L L FL AL E + D VL +F+ D + Y S +R ++++ + QKGLGG LR + A Sbjct: 426 SMGLLVGSISGSVLWAFVLDDDMKQRLTDALAATPLGDLYEVVAREVEEIVKPWTEPSKDKLLPDW-PIPQVPPDTPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLETLAQYYEIVVFSNNHQFMADDVVTRLDRKQTVLHILARESTRYYNGAHVKDLSKLNRDLRHVVIIDDDPLAYQLQPENAIPIKPYMDGRDRDDHELKDLIPFLKALASERI-PDFRTVLAEFRDEDGVVRDLPAKYASRVRAQELQQQQERQKGLGGFLRGRLA 701
BLAST of NO07G01520 vs. NCBI_GenBank
Match: GAX10169.1 (hypothetical protein FisN_3Lh365 [Fistulifera solaris]) HSP 1 Score: 241.5 bits (615), Expect = 5.000e-60 Identity = 107/221 (48.42%), Postives = 159/221 (71.95%), Query Frame = 0 Query: 157 FSPFINPSREKLLPDWHSIPNIPPDAPCPPTLVLDLEDTLVHATWDPKFGWRYAKRPGVDRFLQDLSKYYEIVLFSPSNFGVVDPITWTLDKQGLIMHRLYKDSTRFYQGKHIKDLSKLNRDLRKVVIIDDDPDAFRFQPQNGIRIKPFKDPKDKADSSLDKLRAFLLALVMEGVADDIPGVLRQFQGLDADQIGDAYKSMLRQAQIKEMERHQKGLGGLL 378 F P +KLLPDW +PN+P D P P TLV+DL++TLV +TWD K+G+R+AKRPGVD+FL+ ++ YYEIVLFSPS G+ DP+ +LDK+G IMHRLY+D+T + G +IKDL +LNR++ ++V++DDDP+ +F P N I IKP+ DP D+ D++L+++ FL+ + E DIP +LRQ+ G+D+DQI D + + + +++ +GLGGL+ Sbjct: 111 FEEMAVPQYDKLLPDWSQMPNVPHDIPVPHTLVIDLDNTLVSSTWDRKYGYRHAKRPGVDQFLRTMAMYYEIVLFSPSIDGMADPVVTSLDKEGCIMHRLYRDATVYKNGVYIKDLDRLNRNVNRIVVLDDDPEEVQFHPYNVIPIKPYTDPSDRTDNALERITPFLIEIARENYG-DIPTLLRQYHGMDSDQIADEIERRINLIRYDRLQQSSRGLGGLV 330
BLAST of NO07G01520 vs. NCBI_GenBank
Match: GAX16154.1 (hypothetical protein FisN_3Hh365 [Fistulifera solaris]) HSP 1 Score: 241.1 bits (614), Expect = 6.500e-60 Identity = 107/220 (48.64%), Postives = 158/220 (71.82%), Query Frame = 0 Query: 157 FSPFINPSREKLLPDWHSIPNIPPDAPCPPTLVLDLEDTLVHATWDPKFGWRYAKRPGVDRFLQDLSKYYEIVLFSPSNFGVVDPITWTLDKQGLIMHRLYKDSTRFYQGKHIKDLSKLNRDLRKVVIIDDDPDAFRFQPQNGIRIKPFKDPKDKADSSLDKLRAFLLALVMEGVADDIPGVLRQFQGLDADQIGDAYKSMLRQAQIKEMERHQKGLGGL 377 F P +KLLPDW +PN+P D P P TLV+DL++TLV +TWD K+G+R+AKRPGVD+FL+ ++ YYEIVLFSPS G+ DP+ +LDK+G IMHRLY+D+T + G +IKDL +LNR++ ++V++DDDP+ +F P N I IKP+ DP D+ D++L+++ FL+ + E DIP +LRQ+ G+D+DQI D + + + +++ +GLGGL Sbjct: 108 FEEMAVPQYDKLLPDWSQMPNVPHDIPVPHTLVIDLDNTLVSSTWDRKYGYRHAKRPGVDQFLRTMAMYYEIVLFSPSIDGMADPVVTSLDKEGCIMHRLYRDATVYKNGVYIKDLDRLNRNVNRIVVLDDDPEEVQFHPYNVIPIKPYTDPSDRTDNALERITPFLIEIARENYG-DIPTLLRQYHGMDSDQIADEIERRINLIRYDRLQQSSRGLGGL 326
BLAST of NO07G01520 vs. NCBI_GenBank
Match: ETL78807.1 (mitochondrial import inner membrane translocase subunit TIM50 [Phytophthora parasitica]) HSP 1 Score: 221.1 bits (562), Expect = 6.900e-54 Identity = 122/284 (42.96%), Postives = 173/284 (60.92%), Query Frame = 0 Query: 113 LIGGSVAAGGAYLFYQTSTTDQSIDDVLRASPVGFPY---AWLYDSVFSPFINPSREKLLPDWHSIPNIPPDAPCPPTLVLDLEDTLVHATWDPKFGWRYAKRPGVDRFLQDLSKYYEIVLFSPSNFGVVDPITWTLDKQGLIMHRLYKDSTRFYQGKHIKDLSKLNRDLRKVVIIDDDPDAFRFQPQNGIRIKPFKDPKDKADSSLDKLRAFLLALVMEGVAD--DIPGVLRQFQGLDADQIGDAYKSMLRQAQIKEMERHQKGLGGLLRSQKAFQSIGHPLS 392 L+ GS++ + F + +SI + L A+ +G Y A + PF +PSR+KLLPDW IP +P D P P LVLDLEDTLVH+ W K GWR+AKRPGVD FL+ L +YYEIV+FS N+G + I LD + +H L +D+TR+ G H+KDLS LNRDL++VVI+DDDP A++ QP+N I +KPF + +D+ D L L FL AL E V D + G R G+ D + Y + + Q ++++ ++ +KG GG +R + + HP S Sbjct: 95 LLAGSISGSIVWNFVLDDSIKKSIKETLGATFLGDIYVVIAKKVEETVKPFTDPSRQKLLPDW-PIPQVPADTPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLETLCQYYEIVIFS-QNYG-AEEIVQKLDPKQCALHVLSRDATRYLNGAHVKDLSNLNRDLKQVVILDDDPAAYQLQPENAIPVKPFTNGRDRDDHELKDLIPFLKALASERVPDFRQVIGEFRDEDGVVRD-LATKYGARVHQLEMQKEQQKKKGFGGFVRGRMSH----HPAS 370
BLAST of NO07G01520 vs. NCBI_GenBank
Match: ETP29760.1 (mitochondrial import inner membrane translocase subunit TIM50 [Phytophthora parasitica P10297]) HSP 1 Score: 221.1 bits (562), Expect = 6.900e-54 Identity = 122/284 (42.96%), Postives = 173/284 (60.92%), Query Frame = 0 Query: 113 LIGGSVAAGGAYLFYQTSTTDQSIDDVLRASPVGFPY---AWLYDSVFSPFINPSREKLLPDWHSIPNIPPDAPCPPTLVLDLEDTLVHATWDPKFGWRYAKRPGVDRFLQDLSKYYEIVLFSPSNFGVVDPITWTLDKQGLIMHRLYKDSTRFYQGKHIKDLSKLNRDLRKVVIIDDDPDAFRFQPQNGIRIKPFKDPKDKADSSLDKLRAFLLALVMEGVAD--DIPGVLRQFQGLDADQIGDAYKSMLRQAQIKEMERHQKGLGGLLRSQKAFQSIGHPLS 392 L+ GS++ + F + +SI + L A+ +G Y A + PF +PSR+KLLPDW IP +P D P P LVLDLEDTLVH+ W K GWR+AKRPGVD FL+ L +YYEIV+FS N+G + I LD + +H L +D+TR+ G H+KDLS LNRDL++VVI+DDDP A++ QP+N I +KPF + +D+ D L L FL AL E V D + G R G+ D + Y + + Q ++++ ++ +KG GG +R + + HP S Sbjct: 95 LLAGSISGSIVWNFVLDDSIKKSIKETLGATFLGDIYVVIAKKVEETVKPFTDPSRQKLLPDW-PIPQVPADTPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLETLCQYYEIVIFS-QNYG-AEEIVQKLDPKQCALHVLSRDATRYLNGAHVKDLSNLNRDLKQVVILDDDPAAYQLQPENAIPVKPFTNGRDRDDHELKDLIPFLKALASERVPDFRQVIGEFRDEDGVVRD-LATKYGARVHQLEMQKEQQKKKGFGGFVRGRMSH----HPAS 370 The following BLAST results are available for this feature:
BLAST of NO07G01520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G01520 ID=NO07G01520|Name=NO07G01520|organism=Nannochloropsis oceanica|type=gene|length=1959bpback to top protein sequence of NO07G01520.1 >NO07G01520.1-protein ID=NO07G01520.1-protein|Name=NO07G01520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=445bpback to top Synonyms
Publications
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