NO07G01230, NO07G01230 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G01230 vs. NCBI_GenBank
Match: EWM27260.1 (ubiquitin-conjugating enzyme e2 j1 [Nannochloropsis gaditana]) HSP 1 Score: 346.7 bits (888), Expect = 7.700e-92 Identity = 183/286 (63.99%), Postives = 213/286 (74.48%), Query Frame = 0 Query: 28 PSAATVSINRGGKSS-SCLPRSLDLSVKRLMKEWRVVMAEGLVLLNQGGGNCSLTNNTEHIRLAPCRGNLHEWHFSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQPVWTVRTLVSALRSHMTTKALEVGGIECSARRRRLLAQRSRRFQCRGCGVDHSGFPGKIFEDLPMLVAEVEVEEKVTASTSSSAVTGNGKEEGTARRRRIGKIEGRRGGDRVAMTEKGYDACFVSLFDRYKLPLVLGIAFLLAFLWLNVSS 313 PS A N+GGK S LPRS LS +RL+KEWR +MAEGLVL++ G GNCSL+NNTEHIRLAPCRGNLHEWHFS+AGPPGSV+EGGIYHGRV+LPA+YP +APRLQMLNPSGRFEVGADICLSAT+FHQETWQPVWTVRTLVSALRSHM T A+EVGG+ECSARRR+ LA+RSR F CRGCGVDHS FPG++F LP V EV S V G G+ G R R G+ G DR A + A V++ R+K+ ++L + F + FL LN SS Sbjct: 28 PSYALHIPNKGGKKSPPGLPRSFALSYRRLIKEWRGIMAEGLVLMDSGEGNCSLSNNTEHIRLAPCRGNLHEWHFSVAGPPGSVYEGGIYHGRVILPANYPQTAPRLQMLNPSGRFEVGADICLSATSFHQETWQPVWTVRTLVSALRSHMATPAVEVGGMECSARRRKFLARRSRGFLCRGCGVDHSNFPGRVFRSLPE-VGEV------------SRVPGRGETRG--RGNRGGRETGVGVADRAAFSGL---ARLVAVLRRHKVSVLLCLVFWMCFLVLNASS 295
BLAST of NO07G01230 vs. NCBI_GenBank
Match: CBN79943.1 (similar to ubiquitin-conjugating enzyme E2, J1 (predicted) [Ectocarpus siliculosus]) HSP 1 Score: 166.0 bits (419), Expect = 1.900e-37 Identity = 101/259 (39.00%), Postives = 146/259 (56.37%), Query Frame = 0 Query: 52 SVKRLMKEWRVVMAEGLVLLNQGGGNCSLTNNTEHIRLAPCRGNLHEWHFSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQPVWTVRTLVSALRSHMTTKALEVGGIE-CSARRRRLLAQRSRRFQCRGCGVDHSGFPGKIFEDLPMLVAEVEVEEKVTASTSSSAVTGNGKEEGTARRRRIGKIEGRRGGDRVAMTEKGYDACFVSLFDRYKLPLVLGIAFLLAFLWLN 310 S++R+M EW+ V A+GL + G + S N++E RL P GN+ EWHF+ G S FEGG+YHG + LP +YP S P +++LN + RF+VG+ ICLSA+ +HQETWQP WTV +LVSAL +HMT A+E+G + + ++R A +SR F C CG H FP ED + + +K A SA + EG R +G E R +T + + V L P +L +A ++A ++LN Sbjct: 14 SMRRIMSEWKQVQADGLAM--GEGRSSSKGNSSETFRLKPV-GNMFEWHFTFLGAKDSPFEGGLYHGSISLPENYPQSGPSVRLLNTNMRFKVGSRICLSASEYHQETWQPSWTVASLVSALVAHMTEAAVEIGAVRGATPSQKRKAAVKSRSFVCAACGCCHHAFP----EDRFPIPKGFDKGKKAGAGDDGSA---GARREG---RVAVGVGEAPAAASRGGLTGRSRLSWTVRLVT--SKPFLLALALIIASVFLN 257
BLAST of NO07G01230 vs. NCBI_GenBank
Match: GAX09697.1 (hypothetical protein FisN_19Lh166 [Fistulifera solaris]) HSP 1 Score: 157.5 bits (397), Expect = 6.700e-35 Identity = 78/153 (50.98%), Postives = 99/153 (64.71%), Query Frame = 0 Query: 53 VKRLMKEWRVVMAEGLVLLNQGGGNCSLTNNTEHIRLAPCRGNLHEWHFSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQP-VWTVRTLVSALRSHMTTKALEVGGIECSARRRRLLAQRSRRF 205 V R+ +EWR + G+ G + HI L P +L WHFSI G PGSVFE G+YHGR++LP DYPS+ PR+ ML PSGRF G DICLSA+ +H ETWQP VW +RTLV +LR HM T A E+GG+ S +R + AQ SR++ Sbjct: 88 VLRIQREWRDAINNGMAFDWIQGTPRGKSTAASHIWLGPLGSSLLIWHFSITGVPGSVFEHGVYHGRIVLPPDYPSTPPRVMMLTPSGRFVPGVDICLSASHYHPETWQPNVWNLRTLVESLRLHMCTMAKEIGGLNDSYEKRLVYAQASRKW 240
BLAST of NO07G01230 vs. NCBI_GenBank
Match: GAX19587.1 (hypothetical protein FisN_19Hh166 [Fistulifera solaris]) HSP 1 Score: 155.2 bits (391), Expect = 3.300e-34 Identity = 77/153 (50.33%), Postives = 96/153 (62.75%), Query Frame = 0 Query: 53 VKRLMKEWRVVMAEGLVLLNQGGGNCSLTNNTEHIRLAPCRGNLHEWHFSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQP-VWTVRTLVSALRSHMTTKALEVGGIECSARRRRLLAQRSRRF 205 + R+ +EWR + G+ G T HI L P +L WHFSI G PGSVFE G+YHGR++LP DYPS+ PR+ ML PSGRF G DICLSA+ +H ETWQP W +RTLV +LR HM T A E+GG+ S +R AQ SR + Sbjct: 80 ILRIQREWRDAIKNGMAFDWMQGTPRGKTAAASHIWLGPLGSSLLIWHFSITGVPGSVFERGVYHGRIVLPPDYPSTPPRVMMLTPSGRFLPGVDICLSASHYHPETWQPNAWNLRTLVESLRLHMCTTAKEIGGLNDSYEKRLEYAQASREW 232
BLAST of NO07G01230 vs. NCBI_GenBank
Match: XP_002292659.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED89855.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 153.3 bits (386), Expect = 1.300e-33 Identity = 71/128 (55.47%), Postives = 89/128 (69.53%), Query Frame = 0 Query: 75 GGNCSLTNNTEHIRLAPCRGNLHEWHFSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQPVWTVRTLVSALRSHMTTKALEVGGIECSARRRRLLAQRSR 203 G + + + N +++R+ P NL WHFS+ GP SV+EGG+YHGRVLLP DYP S PR+QML PSGRF G DICLSA+ +H ETW P WTV +LV ALR HM T A E+GG+ + +RR A SR Sbjct: 5 GSSNNESRNNDYVRIGPFGKNLLRWHFSVMGPSNSVYEGGVYHGRVLLPKDYPGSPPRVQMLTPSGRFICGEDICLSASNYHPETWTPRWTVISLVDALRLHMLTTANEIGGLLSTDEKRRQYALESR 132
BLAST of NO07G01230 vs. NCBI_GenBank
Match: EJK77027.1 (hypothetical protein THAOC_01168 [Thalassiosira oceanica]) HSP 1 Score: 150.6 bits (379), Expect = 8.100e-33 Identity = 80/189 (42.33%), Postives = 110/189 (58.20%), Query Frame = 0 Query: 28 PSAATVSINRGGKSSSCLPRSLDLSVKRLMKEWRVVMAEGLVLLNQGGGNCS---LTNNTEHIRLAPCRGNLHEWHFSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQPVWTVRTLVSALRSHMTTKALEVGGIECSARRRRLLAQRSRRFQCRGCGVDH 214 PS T S++ + + CL +R+ +EWR + G+ G + ++ ++RL P N+ WHFS GP SV+ G+YHG+V+LP DYP S PR+QML PSGRF G DICLSA+ +H E+W P WTV +LV ALR HM T A E+GG+ S +RR A+ S+ + G VDH Sbjct: 248 PSRRTQSVST--RDNECL--------RRVKREWREAVKMGVAFDWTTGHTINEQLPSDRNNYVRLGPLGKNMLRWHFSCQGPANSVYSTGLYHGKVILPRDYPGSPPRVQMLTPSGRFLCGHDICLSASNYHPESWTPRWTVLSLVDALRLHMLTTANEIGGVSASDEKRRQYAESSQSWNVPGV-VDH 425
BLAST of NO07G01230 vs. NCBI_GenBank
Match: XP_006007150.1 (PREDICTED: ubiquitin-conjugating enzyme E2 J1 isoform X1 [Latimeria chalumnae]) HSP 1 Score: 146.4 bits (368), Expect = 1.500e-31 Identity = 70/160 (43.75%), Postives = 94/160 (58.75%), Query Frame = 0 Query: 52 SVKRLMKEWRVVMAEGLVLLNQGGGNCSLTNNTEHIRLAPCRGNLHEWHFSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQPVWTVRTLVSALRSHMTTKAL-EVGGIECSARRRRLLAQRSRRFQCRGCG 211 +VKRLMKE L + TEH P NL EWHF++ GPP S F+GG+YHGR++LP +YP P + +L P+GRFEVG ICLS + H ETWQP W++RT + A+ M TK +G ++ + R+ LA+RS+ F C GCG Sbjct: 11 AVKRLMKE-----------------AAELKDPTEHYHAQPLEDNLFEWHFTVRGPPDSEFDGGVYHGRIVLPPEYPMKPPSIILLTPNGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFMPTKGEGAIGSLDYTPEERKALAKRSQEFCCEGCG 153
BLAST of NO07G01230 vs. NCBI_GenBank
Match: XP_006007151.1 (PREDICTED: ubiquitin-conjugating enzyme E2 J1 isoform X2 [Latimeria chalumnae]) HSP 1 Score: 146.4 bits (368), Expect = 1.500e-31 Identity = 70/160 (43.75%), Postives = 94/160 (58.75%), Query Frame = 0 Query: 52 SVKRLMKEWRVVMAEGLVLLNQGGGNCSLTNNTEHIRLAPCRGNLHEWHFSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQPVWTVRTLVSALRSHMTTKAL-EVGGIECSARRRRLLAQRSRRFQCRGCG 211 +VKRLMKE L + TEH P NL EWHF++ GPP S F+GG+YHGR++LP +YP P + +L P+GRFEVG ICLS + H ETWQP W++RT + A+ M TK +G ++ + R+ LA+RS+ F C GCG Sbjct: 11 AVKRLMKE-----------------AAELKDPTEHYHAQPLEDNLFEWHFTVRGPPDSEFDGGVYHGRIVLPPEYPMKPPSIILLTPNGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFMPTKGEGAIGSLDYTPEERKALAKRSQEFCCEGCG 153
BLAST of NO07G01230 vs. NCBI_GenBank
Match: XP_002184772.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43831.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 146.4 bits (368), Expect = 1.500e-31 Identity = 89/236 (37.71%), Postives = 133/236 (56.36%), Query Frame = 0 Query: 31 ATVSINRGGKS---SSCLPRSLDLSVKRLMKEWRVVMAEGLVLLNQGGGNCSLTNNTEHIRLAPCRGNLHEWHFSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQP-VWTVRTLVSALRSHMTTKALEVGGIECSARRRRLLAQRSRRFQCR---GCGVDHSGFPGKIFEDLPMLVAEVEVEEKVTASTSSSAVTGNGKEEGTARRR 260 +T +++R K SS L R S++R+ +EW+ ++ +G + + G +H+ L P NL WHFS G P SVFE GIYHGRV+LP +YP+ PR+Q+ PSGRF+ DICLSA+ +H E+W P W+VRT+V +LR HM T A E+GG S R+ A +SR ++ R +DH ++ +D + ++ EE AS + +A NG E G + + Sbjct: 55 STSTLSRRSKKATLSSSLSRDQTTSIRRIQREWKDIVQQG-IAFDWKRGRPYKFRGPQHVYLGPISNNLWIWHFSFMGLPHSVFEDGIYHGRVILPPNYPARPPRVQVWTPSGRFQTRFDICLSASNYHPESWTPSAWSVRTIVESLRLHMITAAHEIGGTNDSYEDRKEYAVQSRAWKVRVRPDVLIDHE----RMLKD-GYFSSLIKTEESDEASLTENA---NGLEIGDSNTK 281
BLAST of NO07G01230 vs. NCBI_GenBank
Match: CUS15508.1 (unnamed protein product [Tuber aestivum]) HSP 1 Score: 146.4 bits (368), Expect = 1.500e-31 Identity = 74/168 (44.05%), Postives = 97/168 (57.74%), Query Frame = 0 Query: 82 NNTEHIRLAPCRGNLHEWHFSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQPVWTVRTLVSALRSHMTTKAL-EVGGIECSARRRRLLAQRSRRFQCRGCGVDHSGFPGKIFEDLPMLVAEVEVEEKVTASTSSSAVTG 249 N E AP NL EWHF++ GPPG+ + GIYHGR+ LP DYP P + + PSGRFEV +ICLS + H++TWQP W VRT V ALR M T+A +VGGIEC RR +A+ + ++C CG + G+I ED +L E+ +K V G Sbjct: 25 NPAEDYHAAPLDENLFEWHFTLRGPPGTPYAEGIYHGRITLPPDYPLRPPSFRFMTPSGRFEVNREICLSISGHHEDTWQPAWGVRTAVVALRGFMETEAKGQVGGIECDEETRRGIAKEAGEWRCGACGGRSN---GEILEDCRVLAEEMGRGKKAGEEEEERRVEG 189 The following BLAST results are available for this feature:
BLAST of NO07G01230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G01230 ID=NO07G01230|Name=NO07G01230|organism=Nannochloropsis oceanica|type=gene|length=2349bpback to top protein sequence of NO07G01230.1 >NO07G01230.1-protein ID=NO07G01230.1-protein|Name=NO07G01230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=315bpback to top Synonyms
Publications
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