NO06G04680, NO06G04680 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G04680 vs. NCBI_GenBank
Match: EWM20167.1 (extl3 protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 136.3 bits (342), Expect = 1.600e-28 Identity = 86/245 (35.10%), Postives = 127/245 (51.84%), Query Frame = 0 Query: 66 SCGIF---CYWQEDAGIIQVPKSSWERVSDIEYAIWKNLEKMGPDDRNPEHAEGLGAFAALP--SDLGNYLEIGAGPYTQTNNILNVRNNVRIKNIYLAEPNIFRYL-ALDNCIYKDNTIHGQRVNLLSLPVEELPATEFFDTVVAINVIEHVFSAIDFLTAVYSALKPGGILVFGERYFDDPDKDALVLGSAL---LHPIRVKRVFLQHFLRMFDTLYIGDHHTSFAKARGFEESGYYFIGRKK 302 SCG + C++ D G+ +V K W+ E W LE+ DRN EHA +AAL +G+ +E GAGP+TQ+ I + ++ K++ L EP Y+ A+D C YK+ ++ G ++ +P+E +DTV+AIN +EHV A V +AL PGGILVF ER++ PD D + + + LHPIR+ F FD LY + + GYY+IGRK+ Sbjct: 10 SCGAYNDKCFFHPDYGVAKVSKERWQGAQKAENNTW--LEQR-TSDRNEEHARNFNNYAALTMYGKMGDVIEFGAGPFTQSLTIFK-KTGLKPKSVTLVEPLAHTYVDAVDACRYKNGSLPGLNTTIMPVPIENFAQDRQYDTVIAINFVEHVQDAFLAYDKVLNALNPGGILVFHERFW--PDYDGIEVANRREFDLHPIRLSNRFGHWMSTEFDLLYEQEQRERWGNI------GYYWIGRKR 242
BLAST of NO06G04680 vs. NCBI_GenBank
Match: KOO21241.1 (extl3 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 136.0 bits (341), Expect = 2.100e-28 Identity = 99/318 (31.13%), Postives = 143/318 (44.97%), Query Frame = 0 Query: 4 CFLGKCFCLPGRTGSGCQNIRTADWLLTGDHCPVFHTLKEVQEKPVQEYPVEACHIAEK----DPLSCGIFCYWQEDA--------GIIQVPKSSWERVSDIEYAIWKNLEKMGPDDRNPEHAEGLGAFAALPSDLGNYLEIGAGPYTQTNNILNVRNNVRIKNIYLAEPNIFRYL-ALDNCIYKDNTIHGQRVNLLSLPVEELPATEFFDTVVAINVIEHVFSAIDFLTAVYSALKPGGILVFGERYFDDPDKDALVLGSA----LLHPIRVKRVFLQHFLRMFDTL----YIGDHHTSFAKARGFEESGYYFIGRK 301 C LG C C G G C E+ Q +CH AE+ S G+ + Q D GI++V + W+ E ++W DRN HA + ALP LG+ LEIG+GPYTQT ++L +R +I L +P ++ C YK+ +HG+ V +L++P E L T DT+V ++V++ V L A Y+ALKPGG LVF +R F D DA G+A + HP VK L HFL +F+ + + + + ++ YFIGRK Sbjct: 119 CLLGVCICGDGSGGETC-------------------------ERGGQRIFNRSCHAAEELAYGGAQSDGLTRHAQHDVCAFYEPAYGILRVDERRWKFAQLWEASLWSAAPASQTTDRNAHHALQFDQYRALPDALGHVLEIGSGPYTQTQSLL-LRPGSSTSSITLVDPLARVFMDRTKGCTYKEQRLHGRPVRVLNVPAESLSLTHVADTLVMVSVLQSVRDVPAVLQAAYNALKPGGWLVFADRVF-DARWDAFRAGAAPFWDVGHPCAVKETLLDHFLSVFEEVQRRRWAKEPRAGDGRHPALQDEQIYFIGRK 409
BLAST of NO06G04680 vs. NCBI_GenBank
Match: OGZ18363.1 (hypothetical protein A2V72_01160 [Candidatus Nealsonbacteria bacterium RBG_13_37_56]) HSP 1 Score: 101.3 bits (251), Expect = 5.800e-18 Identity = 75/254 (29.53%), Postives = 115/254 (45.28%), Query Frame = 0 Query: 67 CGIFCYWQEDAGIIQVPKSSWERVSDIEYAIWKNLEKMGPDDRNPEHAEGLGAFAALPS-DLGNYLEIGAGPYTQTNNILNVRNNVRIKNIYLAEPNIFRYLALDNCIYKD-----------NTIHGQR--VNLLSLPVEELPATEFFDTVVAINVIEHVFSAIDFLTAVYSALKPGGILVFGERYFDDPDKDALVLGS-ALLHPIRVKRVFLQHFL-RMFDTLYIGDHHTSFAKARGFEE---SGYYFIGRKK 302 C Y+ + GI + ++ W E +W K D N E + L + N +E+G GP+T IL + V+ +NI+L +P + YL NC YK N++ G++ VN S P+EE E FD +V I+V+EH + + K G VF +++FD + VL HP+RV++ L +FL F TL + FA +RG + G+Y+IG KK Sbjct: 40 CNDSKYYNPEKGITSIDRTRWLDAQQAEKNVWLRDFKRLNQDNNKLKKENFDNYDLLKNLKFNNVIELGCGPFTNIRYILKI---VQAENIHLLDPLLKDYLKKTNCTYKSGKLVLGDNNFLNSVFGKKRSVNFYSCPIEEFNCPEKFDLIVMIDVLEHCYDFNKIANKILETSKKGTYFVFQDKFFDINNISGEVLTKYDAAHPLRVRKELLLNFLEENFITLLSKTKY--FACSRGERDLSFYGFYYIGYKK 288
BLAST of NO06G04680 vs. NCBI_GenBank
Match: KOO23358.1 (hypothetical protein Ctob_005151 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 84.7 bits (208), Expect = 5.700e-13 Identity = 58/162 (35.80%), Postives = 83/162 (51.23%), Query Frame = 0 Query: 144 ILNVRNNVRIKNIYLAEPNIFRYLALDNCIYKDNTIHGQRVNLLSLPVEELP--ATEFFDTVVAINVIEHVFSAIDFLTAVYSALKPGGILVFGERYFDDPDKDALVLGSALLHPIRVKRVFLQHFL-RMFDTLY--IGDHHTSFAKARGFEESGYYFIGRK 301 +LN R ++ +I L +P I YL N +YK+ ++G V+L S+ EE+P E FD VV IN IEH F+A L Y L+P G+ +F ER + D + HP+R+ F +L ++D +Y G H T + F E YFIGRK Sbjct: 1 MLNARPDINATSITLVDPGINGYLRSGNTLYKNGFLNGVPVDLHSIGAEEVPYSENETFDVVVMINCIEHTFNAFATLETAYRLLRPRGLFIFQERAVRLSEND------QIYHPVRLPLHFYDWWLGLLYDEIYRFRGKHPT----LKRFLEGEVYFIGRK 152
BLAST of NO06G04680 vs. NCBI_GenBank
Match: WP_086425288.1 (class I SAM-dependent methyltransferase [Nitrospira cf. moscoviensis SBR1015] >OQW31646.1 hypothetical protein A4C66_04875 [Nitrospira sp. HN-bin3]) HSP 1 Score: 75.1 bits (183), Expect = 4.500e-10 Identity = 70/253 (27.67%), Postives = 107/253 (42.29%), Query Frame = 0 Query: 82 VPKSSWERVSDIEYAIW--------------------KNLEKMGP--------DDRNPEHAEGLGAFAALPSDLGNYLEIGAGPYTQTNNILNVRNNVRIKNIYLAEPNIFRYLALDNCIYKDNTIHGQRVNLLSLPVEELP-ATEFFDTVVAINVIEHVFSAIDFLTAVYSALKPGGILVFGERYFDDPDKDALVLGSALLHPIRVKRVFL-QHFLRMFDTLYIGDHHTSFAKARGFEESGYY----FIGRK 301 V + W++ + E A W K L K GP DD N AE + LPS N +E+GAGPYT IL R+ ++ ++P I YL + + V + P+E+ P A+++FD VV INV++H ++ + KPGG LV G+ + D +G + HPIR+ L + L F + + ++A G S +Y FIG+K Sbjct: 8 VSRERWQQAQEWEGAYWRAQHPARPDRVSSSLQKLTAKVLGKQGPETEQPSAGDDWNHWWAEQFEQYQCLPSTFENVIEVGAGPYTNVRVILEGRS---ASHLICSDPLIREYLRFKG-QWLERMWQAGAVYVDDHPLEDCPFASDYFDLVVVINVLDHCRDSLACIRQATRITKPGGYLVIGQDLTNIDDVQR--IGDDIGHPIRIDHDTLDKELLNGFRKV----RYKILSRAEGRNPSAHYGTYVFIGQK 250
BLAST of NO06G04680 vs. NCBI_GenBank
Match: WP_090748975.1 (class I SAM-dependent methyltransferase [Candidatus Nitrospira nitrosa] >CUS36420.1 putative Methyltransferase type 11 [Candidatus Nitrospira nitrosa]) HSP 1 Score: 71.6 bits (174), Expect = 5.000e-9 Identity = 58/197 (29.44%), Postives = 89/197 (45.18%), Query Frame = 0 Query: 107 DDRNPEHAEGLGAFAALPSDLGNYLEIGAGPYTQTNNILNVRNNVRIKNIYLAEPNIFRYLALDNCIYKDNTIHGQRVNLLSLPVEELP-ATEFFDTVVAINVIEHVFSAIDFLTAVYSALKPGGILVFGERYFDDPDKDALVLGSALLHPIRVKRVFL-QHFLRMFDTLYIGDHHTSFAKARGFEESGYYFIGRKK 302 DD N +E G + LP N +E+G GPYT IL R ++Y ++P I +Y+ D + G + + P+E+ P A ++FD V INV++H ++ L V KPGG +V G+ D +D G + HPIR+ L Q L + + + + Y FIGRK+ Sbjct: 61 DDWNHWWSEQFGQYEELPKAFENVVELGCGPYTNMRVILQRR---PATHVYGSDPLIRKYIKFDGQWLAEMWKAG-NIFIDDHPLEDCPFADDYFDLTVLINVLDHCRDSLACLKQVVRITKPGGYVVVGQDLSD--VEDVKRTGDDIGHPIRIDHHILDQELLSRCEPIRYKVLERNAGRNPEAHYGTYIFIGRKR 251
BLAST of NO06G04680 vs. NCBI_GenBank
Match: OYT21275.1 (hypothetical protein CCU26_02015 [Nitrospira sp. UW-LDO-01]) HSP 1 Score: 70.9 bits (172), Expect = 8.500e-9 Identity = 57/197 (28.93%), Postives = 90/197 (45.69%), Query Frame = 0 Query: 107 DDRNPEHAEGLGAFAALPSDLGNYLEIGAGPYTQTNNILNVRNNVRIKNIYLAEPNIFRYLALDNCIYKDNTIHGQRVNLLSLPVEELP-ATEFFDTVVAINVIEHVFSAIDFLTAVYSALKPGGILVFGERYFDDPDKDALVLGSALLHPIRVKRVFL-QHFLRMFDTLYIGDHHTSFAKARGFEESGYYFIGRKK 302 DD N +E + LP+ N +E+G GPYT IL R+ + ++Y ++P I +Y+ D + G + + P+E+ P A +FD V INV++H ++ L V KPGG +V G+ D D + G + HPIR+ L Q L + + + + Y FIGRK+ Sbjct: 61 DDWNHWWSEQFAQYEELPTAFENVVELGCGPYTNMRVILERRSAM---HVYGSDPLIRKYIKFDGQWLAEMWKAG-NIFIDDHPLEDCPFAANYFDLTVLINVLDHCRDSLACLKQVVRITKPGGYVVVGQDLSDVEDVNR--TGDDIGHPIRIDHHILDQELLSRCEPIRYKVLDRNAGRNPEAHYGTYIFIGRKR 251
BLAST of NO06G04680 vs. NCBI_GenBank
Match: KRT66125.1 (type 11 methyltransferase [Candidatus Dadabacteria bacterium CSP1-2]) HSP 1 Score: 70.5 bits (171), Expect = 1.100e-8 Identity = 64/258 (24.81%), Postives = 103/258 (39.92%), Query Frame = 0 Query: 79 IIQVPKSSWERVSDIEYAIWKNLEKMGP----------------------DDRNPEHAEGLGAFAALPSDLGNYLEIGAGPYTQTNNILNVRNNVRIKNIYLAEPNIFRYLALDNCIYKDNTIHGQRVNLLSLPVEELP-ATEFFDTVVAINVIEHVFSAIDFLTAVYSALKPGGILVFGERYFDDPDKDALVLGSALL-HPIRVKRVFLQHFL-RMFDTLYIGDHHTSFAKARGFEESGYYFIGRKKEIFSAFDEPG 312 II++ + WE + E W +KM DD N + LP + N +E+G GPYT N + K+++L++P I Y+ + G + + +EE P A ++FD V INV++HV A + + KPGGIL+ G+ D+ D + + HPI++ +L F+ R F++L +A Y F G+K D G Sbjct: 20 IIKISRERWEMAQEWEKEHWVKTQKMRAKYGKNIIWKFIALLGLKSKYRGDDWNYWWKRQFNDYNFLPEVIENAIELGCGPYT---NFRLIIERCVPKHLFLSDPLIRTYVNFKQTFVSEMYRKGLCI-IDDQTIEEFPFAPDYFDLCVMINVLDHVQDAELCMKNAINITKPGGILIIGQDLTDEEDMHRIEGAEGEVGHPIKIGHDWLDKFIKRKFESLIYKILPREEGRAPIAHYGTYIFAGKKLNYKKTKDSDG 273
BLAST of NO06G04680 vs. NCBI_GenBank
Match: OGF61546.1 (hypothetical protein A2Y62_01840 [Candidatus Fischerbacteria bacterium RBG_13_37_8]) HSP 1 Score: 67.4 bits (163), Expect = 9.400e-8 Identity = 52/190 (27.37%), Postives = 84/190 (44.21%), Query Frame = 0 Query: 84 KSSWERVSDIEYAIWKNLEKMGPDDRNPEHAEGLGAFAALPSDLGNYLEIGAGPYTQTNNILNVRNNVRIKNIYLAEPNIFRYLALDNC----IYKDNTIHGQRVNLLSLPVEELP-ATEFFDTVVAINVIEHVFSAIDFLTAVYSALKPGGILVFGERYFDDPDKDALVLGSALLHPIRVKRVFLQHFL 269 K+ + R + +I K DD N A + +P +L N +E+G GPYT IL +I ++ ++P + Y+ +K+ TI + EE P A+ +FD + INV++HV A+ L K GG L+ G+ + +DA +G + HPIR+ L L Sbjct: 37 KTLYRRFAQWSKSIIKEKMHNSGDDWNLWWANKFNYYELIPQELDNVIELGCGPYTNMRIIL---QKFKINHVVCSDPLVLHYVTFKGRWLAEAWKERTI-----LIDDHKAEECPFASNYFDLTILINVLDHVHDALLCLRQAIRITKSGGHLIIGQDLTN--FEDARRIGDDIGHPIRIDHEMLDRVL 216 The following BLAST results are available for this feature:
BLAST of NO06G04680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 9
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G04680 ID=NO06G04680|Name=NO06G04680|organism=Nannochloropsis oceanica|type=gene|length=975bpback to top protein sequence of NO06G04680.1 >NO06G04680.1-protein ID=NO06G04680.1-protein|Name=NO06G04680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=325bpback to top Synonyms
Publications
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