NO06G04660, NO06G04660 (gene) Nannochloropsis oceanica

Overview
NameNO06G04660
Unique NameNO06G04660
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1139
Alignment locationchr6:1339878..1341016 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:1339878..1341016 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO06G04660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR049ncniR049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G04660.1NO06G04660.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G04660.1NO06G04660.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G04660 ID=NO06G04660|Name=NO06G04660|organism=Nannochloropsis oceanica|type=gene|length=1139bp
ATGGAAAAGAAGAGgtaatgaggatgagtatgtgagcagtcgaaatgatt
gtgcgctgttgtttttggaggggggcttgaaattaactcatcccttctca
cccccttaactagGTTGACCCGGGGCGCCTCAAAATTAGCTAGACCCGgt
aaacacctcagacccatcgaccgacacttctccacgaagtcttttatcct
tttcatggaattagcaggattacctcagatacaaagtagcgaatattcga
accaatttgacagctcaattttcgaagtacttctcactgttcccttcatt
ctaaaccttattgacatatgagaccctatgcaccgctgtgggtaattgac
ggagaaaggagtatagtggacgtgttaactgactgaagaatcgttttggt
attcgtacgaaggccacaaagagtggaaatgacaggagggctggtgctgg
acgagtctatgtttctggagggaaatgtcttcaatgacgaccgctctgat
ttcaagacaaagaaccacaaattccctgcaaaggcactccttcagaggaa
cttttgggtgtcatgtgcgtcgcgagccagtcccaacagtggcgatgtgg
tgcacaatcacctggggaaagacatgcaccacatggtcccgacgatggag
gcggggaagactattaagaggtggccatgcttccacgggataatggactt
gacgggcgagacggacacacaatgtcttcgatagTGAAGCAGCAGCTTGA
CCCGCAGGAGAAGAATTGCATAAAAGTGAGGGTGCAGCACAAGGAGATGA
GTTACCCTGATGCTTTCGAGGCCTTCAAAgtaagcgacatgttgaagggc
catgtggaggcaaacgagatttcaacttcccttttcaccttctcctggtt
cttaaccaacaaatcatttcagatcatttcaggtcaataaccctcgtcgc
aacccctcacagAAAACTCATTGTCTGCAAGCCACGCGGCTGAGGGTAAT
AGCATGCATATGCACAAGGCATGCCTGTCTGCTGCAGAATTGCCGGAAGC
GGGGCCCGATGAATCTCCTACACTGCCGGGTGCAAAGGTCTTTCACCACG
GCAACCTCTTATCTCTCCCCTCTTTCCCACATCCAATGA
back to top

protein sequence of NO06G04660.1

>NO06G04660.1-protein ID=NO06G04660.1-protein|Name=NO06G04660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=107bp
MEKKRLTRGASKLARPVKQQLDPQEKNCIKVRVQHKEMSYPDAFEAFKKT
HCLQATRLRVIACICTRHACLLQNCRKRGPMNLLHCRVQRSFTTATSYLS
PLSHIQ*
back to top
Synonyms
Publications