NO06G04050, NO06G04050 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G04050 vs. NCBI_GenBank
Match: XP_005855868.1 (vesicle transport protein [Nannochloropsis gaditana CCMP526] >EKU20493.1 vesicle transport protein [Nannochloropsis gaditana CCMP526] >EWM26400.1 vesicle transport protein [Nannochloropsis gaditana]) HSP 1 Score: 318.5 bits (815), Expect = 1.500e-83 Identity = 156/207 (75.36%), Postives = 175/207 (84.54%), Query Frame = 0 Query: 1 MNLEAGLNPGRGASHSSTSSAQAAFASSSPSFMDSARRLLGVEARPKTWCEQMEEDMCWWCPSLTWQHRIFGCLCCFVLGLILEVGSFFRFTKLLTGSPGPFAVMYTLGNLISLAGSCFLSGPFAQAKSMFHPTRALCTAVYVLTLVLTLAVAFSDVPGQGALLVIMIIIQFMSLCYYVLSYIPFARQMVWQTCGSCLGLGHDGSLG 208 MNLE+GL P GA +FMDSARRLLGVEARPKT+CE++EEDMCWWCP+LTWQ R+FGCLCCF++G+ILE GSFFRFTKLLTG P PFAVMYT+GNLISLAGSCFLSGPF+Q KSMFHPTRA+CT+VYVLTLV TL +AFSDVPGQG LLV+MII+QF+SL YY+LSYIPFARQMVWQTCGSCLGLG GS G Sbjct: 1 MNLESGLGP--GAXXXXXXXXXXXXXXXXXNFMDSARRLLGVEARPKTFCERLEEDMCWWCPTLTWQQRLFGCLCCFLVGMILEFGSFFRFTKLLTGHPEPFAVMYTIGNLISLAGSCFLSGPFSQVKSMFHPTRAVCTSVYVLTLVFTLLIAFSDVPGQGPLLVLMIIVQFLSLSYYILSYIPFARQMVWQTCGSCLGLGEAGSYG 205
BLAST of NO06G04050 vs. NCBI_GenBank
Match: XP_009038786.1 (hypothetical protein AURANDRAFT_29003 [Aureococcus anophagefferens] >EGB06614.1 hypothetical protein AURANDRAFT_29003 [Aureococcus anophagefferens]) HSP 1 Score: 154.5 bits (389), Expect = 3.700e-34 Identity = 76/167 (45.51%), Postives = 112/167 (67.07%), Query Frame = 0 Query: 33 MDSARRLLGVEARPKTWCEQMEEDMCWWCPSLTWQHRIFGCLCCFVLGLILEVGSFFRFTKLLTGSPGPFAVMYTLGNLISLAGSCFLSGPFAQAKSMFHPTRALCTAVYVLTLVLTLAVAFSD--VPGQGALLVIMIIIQFMSLCYYVLSYIPFARQMVWQTCGSC 198 M S R LL E RP+T EQ+EE+ C CP L+W+ R+ G CF LG+++E+GSF R +L+ G+P PFAV Y+LGN+I++ S FL+GP+ Q KSM PTR + TA Y++ + TL VA D +P + L+++++ +Q ++L +Y++SYIPFAR V C C Sbjct: 1 MASTRSLLTGEPRPQTVAEQVEEECCKACPRLSWKQRLIGFSLCFALGVVVELGSFMRIVELVGGNPKPFAVTYSLGNVIAICSSFFLAGPYKQCKSMLAPTRVIATATYLVAIGATLFVALFDARIPARAGLIILLVCVQTIALFWYMISYIPFARDFVKNCCKGC 167
BLAST of NO06G04050 vs. NCBI_GenBank
Match: CBN78912.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 140.2 bits (352), Expect = 7.300e-30 Identity = 71/163 (43.56%), Postives = 109/163 (66.87%), Query Frame = 0 Query: 31 SFMDSARRLLGVEARPKTWCEQMEEDMCWWCPSLTWQHRIFGCLCCFVLGLILEVGSFFRFTKLLTGSPGPFAVMYTLGNLISLAGSCFLSGPFAQAKSMFHPTRALCTAVYVLTLVLTLAVA---FSDVPGQGALLVIMIIIQFMSLCYYVLSYIPFARQMV 191 S S+ RLLG E K+ ++MEE +C CPSL+W++R+ G C +G L GS FR +LLTG+P PF + ++LG+ +++ S FL+GP+ Q K MF+P RA+ T++Y+ TL TL VA ++ VP +G LL+ +++ QF+S +Y LSY+PFAR+ + Sbjct: 7 SMKASSMRLLGGEPEEKSTLQEMEEAVCSVCPSLSWRNRLIGYGACLAVGFCLTFGSLFRVAQLLTGNPRPFVLYFSLGSALNICSSFFLTGPWKQIKKMFNPVRAVATSIYLATLSATLFVALSPYASVPFRGILLLCLVVAQFLSYVWYTLSYVPFARRFM 169
BLAST of NO06G04050 vs. NCBI_GenBank
Match: POM70981.1 (Vesicle transport protein [Phytophthora palmivora var. palmivora]) HSP 1 Score: 133.3 bits (334), Expect = 8.900e-28 Identity = 63/149 (42.28%), Postives = 98/149 (65.77%), Query Frame = 0 Query: 59 WWCPSLTWQHRIFGCLCCFVLGLILEVGSFFRFTKLLTGSPGPFAVMYTLGNLISLAGSCFLSGPFAQAKSMFHPTRALCTAVYVLTLVLTLAVAFSDVPGQGALLVIM-IIIQFMSLCYYVLSYIPFARQMVWQTCGSCLGLGHDGSL 207 W CPSL++Q RI GC+ CF+LG +L +GS FR KL+ G+P PFA+ Y++GN++S+ + F GP+ Q ++MFH R VYV+ + LTL + FS+ LLV++ +++QF++L +Y LSY+P+ R + C LGL +D + Sbjct: 31 WLCPSLSYQERIIGCVTCFMLGFLLSLGSTFRLAKLVHGNPAPFAIAYSIGNILSICCTTFFVGPWKQVQTMFHSKRRYSAIVYVVFMFLTLLLCFSNHIHHRMLLVLLSVLVQFLALVWYTLSYVPYGRSIALSCCKRALGLANDDDM 179
BLAST of NO06G04050 vs. NCBI_GenBank
Match: XP_002997870.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY67845.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 131.7 bits (330), Expect = 2.600e-27 Identity = 68/168 (40.48%), Postives = 102/168 (60.71%), Query Frame = 0 Query: 37 RRLLGVEARPKTWCEQMEEDMCWWCPSLTWQHRIFGCLCCFVLGLILEVGSFFRFTKLLTGSPGPFAVMYTLGNLISLAGSCFLSGPFAQAKSMFHPTRALCTAVYVLTLVLTLAVAFS-DVPGQGALLVIMIIIQFMSLCYYVLSYIPFARQMVWQTCGSCLGLGHD 204 ++LL E+ T + W CPSL++Q R+ GC+ CF+LG +L +GS FR KL G+P PFA+ YT+GN++S+ + F GP+ Q ++MFH R VYV+ + +TL + FS V + ++I +IIQFM+L +Y LSY+P+ R + C LGL D Sbjct: 10 QKLLDPESGQPTEGSPGPNNSFWLCPSLSYQERVIGCVTCFLLGFLLSLGSTFRLAKLAHGNPAPFAIAYTIGNILSICCTTFFVGPWKQIQTMFHSKRRYSAVVYVVFIFVTLLLCFSHHVHHRLFFVLISVIIQFMALVWYTLSYVPYGRSIAKSCCKRTLGLASD 177
BLAST of NO06G04050 vs. NCBI_GenBank
Match: POM62761.1 (Vesicle transport protein [Phytophthora palmivora var. palmivora]) HSP 1 Score: 131.7 bits (330), Expect = 2.600e-27 Identity = 62/149 (41.61%), Postives = 97/149 (65.10%), Query Frame = 0 Query: 59 WWCPSLTWQHRIFGCLCCFVLGLILEVGSFFRFTKLLTGSPGPFAVMYTLGNLISLAGSCFLSGPFAQAKSMFHPTRALCTAVYVLTLVLTLAVAFSDVPGQGALLVIM-IIIQFMSLCYYVLSYIPFARQMVWQTCGSCLGLGHDGSL 207 W CPSL++Q RI GC+ CF+LG +L +GS FR KL+ G+P PFA+ Y++GN++S+ + F GP+ Q ++MFH R VYV+ + LTL + FS+ L V++ +++QF++L +Y LSY+P+ R + C LGL +D + Sbjct: 31 WLCPSLSYQERIIGCVTCFMLGFLLSLGSTFRLAKLVHGNPAPFAIAYSIGNILSICCTTFFVGPWKQVQTMFHSKRRYSAIVYVVFMFLTLLLCFSNHIHHRMLFVLLSVLVQFLALVWYTLSYVPYGRSIALSCCKRALGLANDDDM 179
BLAST of NO06G04050 vs. NCBI_GenBank
Match: XP_008911921.1 (hypothetical protein PPTG_15463 [Phytophthora parasitica INRA-310] >ETI37300.1 hypothetical protein F443_16695 [Phytophthora parasitica P1569] >ETK77520.1 hypothetical protein L915_16224 [Phytophthora parasitica] >ETL30962.1 hypothetical protein L916_16118 [Phytophthora parasitica] >ETL84217.1 hypothetical protein L917_15921 [Phytophthora parasitica] >ETM37403.1 hypothetical protein L914_16037 [Phytophthora parasitica] >ETN02706.1 hypothetical protein PPTG_15463 [Phytophthora parasitica INRA-310] >ETO66043.1 hypothetical protein F444_16703 [Phytophthora parasitica P1976] >ETP07144.1 hypothetical protein F441_16532 [Phytophthora parasitica CJ01A1] >ETP35245.1 hypothetical protein F442_16524 [Phytophthora parasitica P10297]) HSP 1 Score: 131.0 bits (328), Expect = 4.400e-27 Identity = 62/146 (42.47%), Postives = 95/146 (65.07%), Query Frame = 0 Query: 59 WWCPSLTWQHRIFGCLCCFVLGLILEVGSFFRFTKLLTGSPGPFAVMYTLGNLISLAGSCFLSGPFAQAKSMFHPTRALCTAVYVLTLVLTLAVAFS-DVPGQGALLVIMIIIQFMSLCYYVLSYIPFARQMVWQTCGSCLGLGHD 204 W CPSL++Q R+ GC+ CF+LG +L +GS FR KL+ G+P PFA+ YT+GN++S+ + F GP+ Q ++MFH R VYV+ + +TL + FS + + ++I ++IQFM+L +Y LSY+P+ R + C LGL D Sbjct: 32 WLCPSLSYQERVIGCVTCFLLGFLLSLGSTFRLAKLVHGNPAPFAIAYTIGNILSIGCTTFFVGPWKQVQTMFHSKRRYSAVVYVVFIFVTLLLCFSHHIHHRVFFVLISVLIQFMALVWYTLSYVPYGRSIARSCCKRALGLASD 177
BLAST of NO06G04050 vs. NCBI_GenBank
Match: XP_009528041.1 (hypothetical protein PHYSODRAFT_255591 [Phytophthora sojae] >EGZ18983.1 hypothetical protein PHYSODRAFT_255591 [Phytophthora sojae]) HSP 1 Score: 129.4 bits (324), Expect = 1.300e-26 Identity = 62/146 (42.47%), Postives = 94/146 (64.38%), Query Frame = 0 Query: 59 WWCPSLTWQHRIFGCLCCFVLGLILEVGSFFRFTKLLTGSPGPFAVMYTLGNLISLAGSCFLSGPFAQAKSMFHPTRALCTAVYVLTLVLTLAVAFSDVPGQGALLVIM-IIIQFMSLCYYVLSYIPFARQMVWQTCGSCLGLGHD 204 W CPSL++Q R+ GC+ CF+LG +L +GS FR KL+ G+P PFA+ YT+GN++S+ + F GP+ Q ++MFH R VYV+ + +TL + FS LLV++ +I+QF++L +Y LSY+P+ R + C GL D Sbjct: 36 WLCPSLSYQERVIGCVTCFMLGFVLSLGSTFRLAKLVHGNPAPFAIAYTIGNVLSIGCTTFFVGPWKQVQTMFHSKRRYSALVYVVFIFVTLLLCFSPHIHHRMLLVLLSVIVQFLALVWYTLSYVPYGRSIALSCCKRVCGLATD 181
BLAST of NO06G04050 vs. NCBI_GenBank
Match: XP_012200322.1 (hypothetical protein SPRG_20096 [Saprolegnia parasitica CBS 223.65] >KDO28990.1 hypothetical protein SPRG_20096 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 125.9 bits (315), Expect = 1.400e-25 Identity = 67/140 (47.86%), Postives = 96/140 (68.57%), Query Frame = 0 Query: 54 EEDMCWWCPS--LTWQHRIFGCLCCFVLGLILEVGSFFRFTKLLTGSPGPFAVMYTLGNLISLAGSCFLSGPFAQAKSMFHPTRALCTAVYVLTLVLTLAVAFS-DVPGQGALLVIMIIIQFMSLCYYVLSYIPFARQMV 191 ++D CPS L+++ R+FGCL CF+LG++L +GS R +L+ G P PFA+ YTLGN++SL + F GP AQ KSMFH R + A YV+ + +TLA+ FS VP + L++I ++IQF +L +Y LSYIP+AR V Sbjct: 25 QQDEALSCPSLNLSYKERLFGCLLCFLLGMVLSLGSTVRLAQLVRGRPAPFAICYTLGNVLSLCCTMFFVGPVAQCKSMFHAKRRVSAATYVVFIGVTLALCFSPHVPHRAGLVLISVLIQFGALWWYTLSYIPYARAAV 164
BLAST of NO06G04050 vs. NCBI_GenBank
Match: GAX99422.1 (Hypothetical protein PINS_007262 [Pythium insidiosum]) HSP 1 Score: 125.6 bits (314), Expect = 1.900e-25 Identity = 65/147 (44.22%), Postives = 92/147 (62.59%), Query Frame = 0 Query: 61 CPSLTWQHRIFGCLCCFVLGLILEVGSFFRFTKLLTGSPGPFAVMYTLGNLISLAGSCFLSGPFAQAKSMFHPTRALCTAVYVLTLVLTLAVAFS-DVPGQGALLVIMIIIQFMSLCYYVLSYIPFARQMVWQTCGSCLGLGHDGSL 207 CPSL++Q R+ G L CF+LG +L GS FR KL+ G+PGPFA+ YT+GNL+SL S F GP Q ++MF R +Y +V+TL + F+ D+P + L++I ++ QF +L +Y LSYIP+ RQMV G+ D L Sbjct: 31 CPSLSYQERVIGFLTCFLLGFLLSFGSTFRLAKLVHGNPGPFAIAYTIGNLLSLGSSMFFVGPCKQVETMFRKKRRGSAIIYXSFIVVTLVLCFARDMPHRFGLVMISVLCQFAALVWYTLSYIPYGRQMVMSCFKRMCGMATDDDL 177 The following BLAST results are available for this feature:
BLAST of NO06G04050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G04050 ID=NO06G04050|Name=NO06G04050|organism=Nannochloropsis oceanica|type=gene|length=624bpback to top protein sequence of NO06G04050.1 >NO06G04050.1-protein ID=NO06G04050.1-protein|Name=NO06G04050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=208bpback to top Synonyms
Publications
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