NO06G03950, NO06G03950 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G03950 vs. NCBI_GenBank
Match: EWM26391.1 (voltage-dependent anion-selective channel [Nannochloropsis gaditana]) HSP 1 Score: 166.4 bits (420), Expect = 1.300e-37 Identity = 79/85 (92.94%), Postives = 82/85 (96.47%), Query Frame = 0 Query: 1 MSKTTPAFFKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGI 86 MSKTTPAFFKDFNKPADTILNDDYSLKRTLKVKHVTPDGV +TTENEL GKDGK+DLKAKISGKYKH ATGFSVDKLQLKETGG+ Sbjct: 1 MSKTTPAFFKDFNKPADTILNDDYSLKRTLKVKHVTPDGVAVTTENELTGKDGKFDLKAKISGKYKHAATGFSVDKLQLKETGGL 85
BLAST of NO06G03950 vs. NCBI_GenBank
Match: XP_002286145.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED95786.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 120.6 bits (301), Expect = 8.100e-24 Identity = 93/278 (33.45%), Postives = 142/278 (51.08%), Query Frame = 0 Query: 9 FKDFNKPADTILNDDYSLKRTLKVK-HVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGVAPGLTFTFKGEEKPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGG-KVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYGV-TLGGIYK-CSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQDYRMGFGATL 283 + D K A +LNDDY+ +LK K P GVT+ TE AG L +K+ K+ + G + DKLQ K G V E +LA A G TFK + +LG+EYT +D++ +SKL S + G VGGD+ L K+ GL+ ++VG++Y T FAS+ +AS + +++ + K + LS+A T+ SG V +GG Y +A T+K K+ +G+ S +I V PKV +TA+ S ++ G G ++ Sbjct: 5 YSDIGKSAKDLLNDDYTNSISLKCKGKAGPVGVTVETERSPAG-----TLSSKVGTKFSY--AGLNFDKLQAKADGSNVLETSLAPCA-GCKVTFKANK--GADLGVEYTAGSIVTTGALDVLNMSKLSTSTCIGVAPGINVGGDLSYNLSGDKA--GLSSYNVGASYATGPLFASVTSASKFS--QFNVGVLYKVNKDLSLASNTTHSSGKACDVLAIGGAYSGLAAVGTIKAKVGSNGVTSACLIKEVAPKVNLTASGSISGVDFSTFKYGLGISM 268
BLAST of NO06G03950 vs. NCBI_GenBank
Match: XP_009530783.1 (hypothetical protein PHYSODRAFT_354972 [Phytophthora sojae] >EGZ13354.1 hypothetical protein PHYSODRAFT_354972 [Phytophthora sojae]) HSP 1 Score: 118.6 bits (296), Expect = 3.100e-23 Identity = 94/287 (32.75%), Postives = 136/287 (47.39%), Query Frame = 0 Query: 9 FKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGV-APGLTFTFKGEE---------KPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQ--DYRMGFGATLG 284 +KD K A+ +L DDY R LK+K +GV+ TTE L + + AK+SG + HGA+G KLQ+ G +V E L V GL TFK E+ K G LG EY + AV SE D V + + A+AVL+ G VGG + A KS + + +VG++Y + S+V + S + + + + S N + +GG YK A +T GKI+ G LS + I V P V +T + K + ++ G G TLG Sbjct: 5 YKDLAKTAENVLRDDYDFSRKLKIKSKASNGVSFTTEGAL---NANKSILAKVSGGFTHGASGVVFKKLQITTQGRVVTEAELPNVLTQGLKLTFKLEDGSVAKNTSAKQVGVLGAEYKQSNLAVNSEADFVS-NTVSAAAVLSQGGFAVGG--QTAFNMDKS--AIVQHNVGASYTGADFVTSLVTKKNFAAVQASFHHHLSHNTVYAAVLDYDLKSASN-TLVVGGRYKADADTTYCGKIDSEGFLSLASIQKVRPYVTLTTSVHVDAKNFEGDSHKFGLGLTLG 282
BLAST of NO06G03950 vs. NCBI_GenBank
Match: XP_002895339.1 (voltage-dependent anion-selective channel protein, putative [Phytophthora infestans T30-4] >EEY58505.1 voltage-dependent anion-selective channel protein, putative [Phytophthora infestans T30-4]) HSP 1 Score: 116.7 bits (291), Expect = 1.200e-22 Identity = 93/287 (32.40%), Postives = 135/287 (47.04%), Query Frame = 0 Query: 9 FKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGV-APGLTFTFKGEE---------KPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQ--DYRMGFGATLG 284 +KD K A+ +L DDY R LK+K +GV+ TTE L +G + AK+SG + HGA+G KLQ+ G +V E L V GL TFK E+ K G LG EY AV SE D V + + A+AVL+ G VGG + A KS + + + G+++ + S+V + S + + + + S N + +GG YK A +T GKI+ G LS + I V P V +T + K + ++ G G TLG Sbjct: 5 YKDLAKTAENVLRDDYDFSRKLKIKSKASNGVSFTTEGAL---NGNKSILAKVSGGFTHGASGVVFKKLQITTQGRVVTEAELPNVLTEGLKLTFKLEDGSVAKNTNAKQVGVLGAEYKQKNLAVNSEADFVS-NTVSAAAVLSQGGFAVGG--QTAFNVDKSIIVQHNF--GASFTGADFVTSLVTKKNFAALQASFHHHLSHNTVYAAVLDYDLKSASN-TLVVGGRYKADADTTYCGKIDSEGFLSLASIQKVRPYVTLTTSVHVDAKNFEGDSHKFGLGLTLG 282
BLAST of NO06G03950 vs. NCBI_GenBank
Match: OWZ21520.1 (Voltage-dependent anion-selective channel protein [Phytophthora megakarya]) HSP 1 Score: 115.5 bits (288), Expect = 2.600e-22 Identity = 94/287 (32.75%), Postives = 133/287 (46.34%), Query Frame = 0 Query: 9 FKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGV-APGLTFTFKGEE---------KPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQ--DYRMGFGATLG 284 +KD K A+ +L DDY R LK+K +GV TTE L + + AK+SG + HGA+G KLQ+ G +V E L V GL TFK E+ K G LG EY AV SE D V + + A+AVL+ G VGG + A KS + + +VG+++ S SIV + S + + + + S N + +GG YK +T GKI+ G LS + I V P V +T + K + ++ G G TLG Sbjct: 5 YKDLAKTAENVLRDDYDFSRKLKIKSKASNGVAFTTEGAL---NANKSILAKVSGGFTHGASGVVFKKLQITTQGRVVTEAELPNVLTEGLKLTFKLEDGSVAKNTSAKQVGVLGAEYKQKNLAVNSEADFVS-NTVSAAAVLSQGGFAVGG--QTAFNVDKS--AIVQHNVGASFTGSDFVTSIVTKKNFAAVQASFHHHLSHNTVYAAVLDYDLKSASN-TLVVGGRYKADNDTTYCGKIDSEGFLSLASIQKVRPYVTLTTSVHVDAKNFEGDSHKFGLGLTLG 282
BLAST of NO06G03950 vs. NCBI_GenBank
Match: POM65519.1 (Voltage-dependent anion-selective channel protein [Phytophthora palmivora var. palmivora]) HSP 1 Score: 115.5 bits (288), Expect = 2.600e-22 Identity = 94/287 (32.75%), Postives = 133/287 (46.34%), Query Frame = 0 Query: 9 FKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGV-APGLTFTFKGEE---------KPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQ--DYRMGFGATLG 284 +KD K A+ +L DDY R LK+K +GV TTE L + + AK+SG + H A+G KLQ+ G +V E L V GL TFK E+ K G LG EY AV SE D V + + A+AVL+ G VGG + A KS + + +VG+++ S SIV + S + + + + S N + +GG YK A +T GKI+ G LS + I V P V +T + K + ++ G G TLG Sbjct: 5 YKDLAKTAENVLRDDYDFSRKLKIKSKASNGVAFTTEGAL---NANKSILAKVSGGFTHSASGVVFKKLQITTQGRVVTEAELPNVLTEGLKLTFKLEDGSVAKNTSAKQVGVLGAEYKQKNLAVNSEADFVS-NTVSAAAVLSQGGFAVGG--QTAFNVDKS--AIVQHNVGASFTGSDFVTSIVTKKNFAAVQASFHHHLSHNTVYAAVLDYDLKSASN-TLVVGGRYKADADTTYCGKIDSEGFLSLASIQKVRPYVTLTTSVHVDAKNFEGDSHKFGLGLTLG 282
BLAST of NO06G03950 vs. NCBI_GenBank
Match: XP_008911143.1 (hypothetical protein PPTG_15631 [Phytophthora parasitica INRA-310] >ETI38057.1 hypothetical protein F443_16075 [Phytophthora parasitica P1569] >ETK78275.1 hypothetical protein L915_15619 [Phytophthora parasitica] >ETL31705.1 hypothetical protein L916_15515 [Phytophthora parasitica] >ETL84992.1 hypothetical protein L917_15336 [Phytophthora parasitica] >ETN03370.1 hypothetical protein PPTG_15631 [Phytophthora parasitica INRA-310] >ETO66826.1 hypothetical protein F444_16059 [Phytophthora parasitica P1976] >ETP07942.1 hypothetical protein F441_15904 [Phytophthora parasitica CJ01A1] >ETP35985.1 hypothetical protein F442_15925 [Phytophthora parasitica P10297] >KUF79046.1 Voltage-dependent anion-selective channel protein 2 [Phytophthora nicotianae] >KUF86844.1 hypothetical protein AM588_10001387 [Phytophthora nicotianae] >KUF96188.1 Voltage-dependent anion-selective channel protein 2 [Phytophthora nicotianae]) HSP 1 Score: 112.1 bits (279), Expect = 2.900e-21 Identity = 90/287 (31.36%), Postives = 134/287 (46.69%), Query Frame = 0 Query: 9 FKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGV-APGLTFTFKGEE---------KPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQ--DYRMGFGATLG 284 +KD K A+ +L DDY R LK+K +GV+ TTE L + + AK+SG + HGA+G KLQ+ G +V E L V GL TFK E+ K G LG EY AV SE D V + + A+AVL+ G +GG + A KS + + +VG+++ + ++V + S + + + + S N + +GG YK +T GKI+ G LS + I V P V +T + K + ++ G G TLG Sbjct: 5 YKDLAKTAENVLRDDYDFSRKLKIKSKASNGVSFTTEGAL---NANKSILAKVSGGFTHGASGVVFKKLQITTQGRVVTEAELPNVLTEGLKLTFKLEDGSVAKNTSAKQVGVLGAEYKQKNLAVNSEADFVS-NTVSAAAVLSQGGFAIGG--QTAFNVDKS--AIVQHNVGASFTGADFVTTLVTKKNFAAVQASFHHHLSHNTVYAAVLDYDLKSASN-TLVVGGRYKVDNDTTYCGKIDSEGFLSLASIQKVRPYVTLTTSVHVDAKNFEGDSHKFGLGLTLG 282
BLAST of NO06G03950 vs. NCBI_GenBank
Match: ETM38102.1 (hypothetical protein L914_15470 [Phytophthora parasitica]) HSP 1 Score: 112.1 bits (279), Expect = 2.900e-21 Identity = 90/287 (31.36%), Postives = 134/287 (46.69%), Query Frame = 0 Query: 9 FKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGV-APGLTFTFKGEE---------KPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQ--DYRMGFGATLG 284 +KD K A+ +L DDY R LK+K +GV+ TTE L + + AK+SG + HGA+G KLQ+ G +V E L V GL TFK E+ K G LG EY AV SE D V + + A+AVL+ G +GG + A KS + + +VG+++ + ++V + S + + + + S N + +GG YK +T GKI+ G LS + I V P V +T + K + ++ G G TLG Sbjct: 5 YKDLAKTAENVLRDDYDFSRKLKIKSKASNGVSFTTEGAL---NANKSILAKVSGGFTHGASGVVFKKLQITTQGRVVTEAELPNVLTEGLKLTFKLEDGSVSKNTSAKQVGVLGAEYKQKNLAVNSEADFVS-NTVSAAAVLSQGGFAIGG--QTAFNVDKS--AIVQHNVGASFTGADFVTTLVTKKNFAAVQASFHHHLSHNTVYAAVLDYDLKSASN-TLVVGGRYKVDNDTTYCGKIDSEGFLSLASIQKVRPYVTLTTSVHVDAKNFEGDSHKFGLGLTLG 282
BLAST of NO06G03950 vs. NCBI_GenBank
Match: GAX26070.1 (hypothetical protein FisN_4Hh426 [Fistulifera solaris]) HSP 1 Score: 112.1 bits (279), Expect = 2.900e-21 Identity = 89/280 (31.79%), Postives = 138/280 (49.29%), Query Frame = 0 Query: 6 PAFFKDFNKPADTILNDDYSLKRTLKVK-HVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGVAPGLTFTFKGEEKPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGG-KVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYG-VTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQDYRMGFGATL 283 P F D +KP ILNDDY+ K +LK K + P VTI TE G L +KI K+ + F+VDK QL GG E ++ + P + +FK + +LG++YT F +D+ +SK+ SA A G KVGGD +L GK+ GL ++VG++Y F S+V++ T YS+ +P L++A T+ + V +G YK LK K+ G++ ++ ++ PKV +TA+ ++ GFG + Sbjct: 2 PTKFADIDKPVKDILNDDYTSKVSLKCKSNAGPVAVTIETERGATGA-----LASKIGTKFSYAK--FNVDKGQLTADGGSALETSMK-LTPDIKLSFKTSK--GADLGIDYTLGSFYATGVLDVQNMSKVSTSACYALPSGLKVGGDAVYSL-SGKT-TGLAGFNVGASYAKGPIFTSLVSSKFST---YSVSVGYNVNPDLTIASLTTHSAENRCNLVGVGASYKNPVIGMLKAKVGSDGIIHACLVKDIAPKVSLTASGSMLATDPSTFKPGFGIAM 266
BLAST of NO06G03950 vs. NCBI_GenBank
Match: GAX94729.1 (voltage-dependent anion-selective channel protein, putative [Pythium insidiosum]) HSP 1 Score: 112.1 bits (279), Expect = 2.900e-21 Identity = 90/289 (31.14%), Postives = 132/289 (45.67%), Query Frame = 0 Query: 9 FKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGV-APGLTFTFKGE---------EKPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTY--PSGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQD--YRMGFGATLG 284 FKD +K A+ +L DDY R LK+K +GV T+E +L + + AK+SG + H +G KLQ+ G ++ E L V GL FT K E K G +GLEY +F+ EVD + + +KA+ V +G VGG V + L +VG ++ + S+V + S + K S A L Y S N + +GG YK A +T GKIN G +S + I + P V +T + K + ++ G G TLG Sbjct: 5 FKDLSKTAEDVLKDDYDFSRKLKIKSKASNGVAFTSEGQL---NANKSILAKVSGAFTHDGSGVVFKKLQVTTQGRLITEAELPNVFTKGLNFTLKLEXGSVAKNTSAKQVGVVGLEYKQDKFSFNKEVDFIG-NNIKAAGVFQQDGFLVGGQVGFNVDKSV----LTEHNVGVSFVGADMATSLVTKKNFGALSASFHH--KLSKDTVYAAVLDYDLKSAAN-TLNVGGRYKADAXTTYAGKINSEGFVSLASIQKIRPYVTLTTSVHVDAKNFEGDAHKFGIGLTLG 282 The following BLAST results are available for this feature:
BLAST of NO06G03950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G03950 ID=NO06G03950|Name=NO06G03950|organism=Nannochloropsis oceanica|type=gene|length=3969bpback to top protein sequence of NO06G03950.1 >NO06G03950.1-protein ID=NO06G03950.1-protein|Name=NO06G03950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=284bpback to top Synonyms
Publications
|