NO06G03830, NO06G03830 (gene) Nannochloropsis oceanica

Overview
NameNO06G03830
Unique NameNO06G03830
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2060
Alignment locationchr6:1063385..1065444 +

Link to JBrowse

Properties
Property NameValue
DescriptionSentrin-specific protease 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:1063385..1065444 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008234cysteine-type peptidase activity
GO:0008234cysteine-type peptidase activity
GO:0008233peptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO:0006508proteolysis
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain_like_cys_pep_sf
IPR003653Peptidase_C48
Homology
[Close]
BLAST of NO06G03830 vs. NCBI_GenBank
Match: EWM26369.1 (sentrin-specific protease 1 [Nannochloropsis gaditana])

HSP 1 Score: 521.5 bits (1342), Expect = 3.500e-144
Identity = 282/532 (53.01%), Postives = 339/532 (63.72%), Query Frame = 0 
Query:  105 QCEQAYQIIDAGFWRFVDRVIFARTATKDRAPLVELVEGIRTAPYLLNLYGQDQIDEMLALVEANANYVTLPHGPSKMLQVTWVTLPEFKRMCSSVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPGHEG-GLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIATGLDMNKEKLLSLLQDISDEYHVQEGSHAEEEAAGSEARVEGVLAAFGARQDPMREALAAVEETLQVKTEARKKAGGRDRRDRNAEMEIRMAVDVKEAIVRERMAPLSEDEQEEIHQLLRHGRDTDVVVSGFNVDMRRQDIRTCAPCTWLNDEVINFFMNLLKERDHALVAEAAAKGKERRSNWFFNSFFISKLLDDNNGYKYANVKRWSRKAGDLFSYDKVFFPVNIGNSHWCLAVIHMQEKKIKYFDSLVGTGREYLLHLRRYLEDEHQDKKKKTLDVSGWELVHSDRQVVPQQANGADCGCFATAFAYMLSENLPIKYISQADMPAFRQRLVMSIMKKALTW 636
            Q + A   ID+ FW FVDRVIF R   + RAPL++LV+GIR+  YL+N YGQ QID++LA ++  A+Y+ LP G S    V WV++ EF+ MC+S++                                                 H G G +                               SIA G++M+K+KLL  LQ ISDEY   +G  A   A  +EARVEGVL  FG  +DP+R ALAAVEETL+  + AR++AGG+D RDR AE+E RM  DVKE +VR RM+ L+  E +E+H +LR G+ TDVV  GFNVDMRRQD++TC P TWLNDEVINFFM+LLKERD                               NNGYKYANV+RWSRKAGDLFSYDKVFFPVNI N+HWCLAVI+MQEKKI+YFDSLVGTGREYL+ LR+Y+ DEHQDKKK  LD+S WELV SDRQVVPQQ NGADCGCFA+AFAY+LSE+LPI YISQADMPAFRQRLV SI+KKALTW
Sbjct:  111 QRQTACSPIDSNFWHFVDRVIFTREEVRGRAPLIKLVDGIRSERYLINCYGQTQIDKLLAPIDTKADYIHLPRGLSGRPLVKWVSMSEFRGMCASLTPIPSPSAVSMGFRKGVLAESSSPVAGYAFSPKR----------------HRGEGYSHDQSAAPRALVEGGDPSTCFRESHSTPLPPPSIAAGINMDKQKLLEHLQQISDEYLADDG--ATTAALEAEARVEGVLGGFGGARDPLRHALAAVEETLRKHSAARREAGGKDWRDRAAEIEARMVKDVKEEMVRARMSSLAPAEVKEVHHVLRQGKATDVVARGFNVDMRRQDLQTCNPGTWLNDEVINFFMSLLKERDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNGYKYANVRRWSRKAGDLFSYDKVFFPVNIRNTHWCLAVIYMQEKKIQYFDSLVGTGREYLVALRQYIADEHQDKKKSALDISDWELVSSDRQVVPQQGNGADCGCFASAFAYLLSEDLPINYISQADMPAFRQRLVYSIVKKALTW 624
[Close]
BLAST of NO06G03830 vs. NCBI_GenBank
Match: ETL92282.1 (hypothetical protein L917_09368 [Phytophthora parasitica] >ETO74455.1 hypothetical protein F444_09801 [Phytophthora parasitica P1976])

HSP 1 Score: 208.8 bits (530), Expect = 5.100e-50
Identity = 122/302 (40.40%), Postives = 178/302 (58.94%), Query Frame = 0 
Query:  346 EALAAVEETLQVKTEARKKAGGRDRRDRNAEMEIRMAVDVKEAIVRERMAPLSE---DEQEE--------------IHQLLRHGRDTDVVVSGFNVDMRRQDIRTCAPCTWLNDEVINFFMNLLKERDHALVAEAAAKGKERRSNWFFNSFFISKLLDDNNGYKYANVKRWSRKAGDLFSYDKVFFPVNIGNSHWCLAVIHMQEKKIKYFDSLVGTGREYLLHLRRYLEDEHQDKKKKTLDVSGWELVHSDRQVVPQQANGADCGCFATAFAYMLSENLPIKYISQADMPAFRQRLVMSIMK 631
            E +A +EE L+ +  +R         +R AE E   A  + E ++ E +  ++E   DE+EE              +   L  G   +V+++ +NVD+ R+ ++   P TWLNDEVINF+  +L +RD ALV      G   + + FFNSFF +K+    NGY + NV+RW+RK  DLF+ DK+F PVN+GN HWC+AVIHM EK+I+Y+DS+ G+G   L  L RYL DE + KKK+  +  GWELV +     PQQ NG+DCG F+  FA  LS N P+ ++ Q D+P  R R+V+ + +
Sbjct:  200 EEIAELEEILRAQHLSRTSKADLLFYNRLAERE---ANTILEEVLLEDIYDIAEDVFDEEEEKSRNKELPPELLEIVENALHEGPMEEVLINKYNVDITRRHLQCMLPGTWLNDEVINFYFQMLSDRDEALV----KAGVLPKRSHFFNSFFYTKV--SENGYNFINVRRWTRKI-DLFAMDKIFMPVNVGNMHWCMAVIHMTEKRIQYYDSMHGSGAACLKVLLRYLHDESEHKKKQKFNDEGWELVTTTPD-TPQQNNGSDCGVFSCMFAEYLSLNKPLSFV-QKDIPFHRHRMVLHVSR 489
[Close]
BLAST of NO06G03830 vs. NCBI_GenBank
Match: ETL92283.1 (hypothetical protein, variant 1 [Phytophthora parasitica] >ETO74456.1 hypothetical protein, variant 1 [Phytophthora parasitica P1976])

HSP 1 Score: 208.8 bits (530), Expect = 5.100e-50
Identity = 122/302 (40.40%), Postives = 178/302 (58.94%), Query Frame = 0 
Query:  346 EALAAVEETLQVKTEARKKAGGRDRRDRNAEMEIRMAVDVKEAIVRERMAPLSE---DEQEE--------------IHQLLRHGRDTDVVVSGFNVDMRRQDIRTCAPCTWLNDEVINFFMNLLKERDHALVAEAAAKGKERRSNWFFNSFFISKLLDDNNGYKYANVKRWSRKAGDLFSYDKVFFPVNIGNSHWCLAVIHMQEKKIKYFDSLVGTGREYLLHLRRYLEDEHQDKKKKTLDVSGWELVHSDRQVVPQQANGADCGCFATAFAYMLSENLPIKYISQADMPAFRQRLVMSIMK 631
            E +A +EE L+ +  +R         +R AE E   A  + E ++ E +  ++E   DE+EE              +   L  G   +V+++ +NVD+ R+ ++   P TWLNDEVINF+  +L +RD ALV      G   + + FFNSFF +K+    NGY + NV+RW+RK  DLF+ DK+F PVN+GN HWC+AVIHM EK+I+Y+DS+ G+G   L  L RYL DE + KKK+  +  GWELV +     PQQ NG+DCG F+  FA  LS N P+ ++ Q D+P  R R+V+ + +
Sbjct:  199 EEIAELEEILRAQHLSRTSKADLLFYNRLAERE---ANTILEEVLLEDIYDIAEDVFDEEEEKSRNKELPPELLEIVENALHEGPMEEVLINKYNVDITRRHLQCMLPGTWLNDEVINFYFQMLSDRDEALV----KAGVLPKRSHFFNSFFYTKV--SENGYNFINVRRWTRKI-DLFAMDKIFMPVNVGNMHWCMAVIHMTEKRIQYYDSMHGSGAACLKVLLRYLHDESEHKKKQKFNDEGWELVTTTPD-TPQQNNGSDCGVFSCMFAEYLSLNKPLSFV-QKDIPFHRHRMVLHVSR 488
[Close]
BLAST of NO06G03830 vs. NCBI_GenBank
Match: ETL92284.1 (hypothetical protein, variant 2 [Phytophthora parasitica] >ETO74457.1 hypothetical protein, variant 2 [Phytophthora parasitica P1976])

HSP 1 Score: 208.8 bits (530), Expect = 5.100e-50
Identity = 122/302 (40.40%), Postives = 178/302 (58.94%), Query Frame = 0 
Query:  346 EALAAVEETLQVKTEARKKAGGRDRRDRNAEMEIRMAVDVKEAIVRERMAPLSE---DEQEE--------------IHQLLRHGRDTDVVVSGFNVDMRRQDIRTCAPCTWLNDEVINFFMNLLKERDHALVAEAAAKGKERRSNWFFNSFFISKLLDDNNGYKYANVKRWSRKAGDLFSYDKVFFPVNIGNSHWCLAVIHMQEKKIKYFDSLVGTGREYLLHLRRYLEDEHQDKKKKTLDVSGWELVHSDRQVVPQQANGADCGCFATAFAYMLSENLPIKYISQADMPAFRQRLVMSIMK 631
            E +A +EE L+ +  +R         +R AE E   A  + E ++ E +  ++E   DE+EE              +   L  G   +V+++ +NVD+ R+ ++   P TWLNDEVINF+  +L +RD ALV      G   + + FFNSFF +K+    NGY + NV+RW+RK  DLF+ DK+F PVN+GN HWC+AVIHM EK+I+Y+DS+ G+G   L  L RYL DE + KKK+  +  GWELV +     PQQ NG+DCG F+  FA  LS N P+ ++ Q D+P  R R+V+ + +
Sbjct:   70 EEIAELEEILRAQHLSRTSKADLLFYNRLAERE---ANTILEEVLLEDIYDIAEDVFDEEEEKSRNKELPPELLEIVENALHEGPMEEVLINKYNVDITRRHLQCMLPGTWLNDEVINFYFQMLSDRDEALV----KAGVLPKRSHFFNSFFYTKV--SENGYNFINVRRWTRKI-DLFAMDKIFMPVNVGNMHWCMAVIHMTEKRIQYYDSMHGSGAACLKVLLRYLHDESEHKKKQKFNDEGWELVTTTPD-TPQQNNGSDCGVFSCMFAEYLSLNKPLSFV-QKDIPFHRHRMVLHVSR 359
[Close]
BLAST of NO06G03830 vs. NCBI_GenBank
Match: XP_008892741.1 (hypothetical protein PPTG_01258 [Phytophthora parasitica INRA-310] >ETI45796.1 hypothetical protein F443_09736 [Phytophthora parasitica P1569] >ETN20885.1 hypothetical protein PPTG_01258 [Phytophthora parasitica INRA-310] >ETP43683.1 hypothetical protein F442_09637 [Phytophthora parasitica P10297])

HSP 1 Score: 208.4 bits (529), Expect = 6.600e-50
Identity = 122/302 (40.40%), Postives = 178/302 (58.94%), Query Frame = 0 
Query:  346 EALAAVEETLQVKTEARKKAGGRDRRDRNAEMEIRMAVDVKEAIVRERMAPLSE---DEQEE--------------IHQLLRHGRDTDVVVSGFNVDMRRQDIRTCAPCTWLNDEVINFFMNLLKERDHALVAEAAAKGKERRSNWFFNSFFISKLLDDNNGYKYANVKRWSRKAGDLFSYDKVFFPVNIGNSHWCLAVIHMQEKKIKYFDSLVGTGREYLLHLRRYLEDEHQDKKKKTLDVSGWELVHSDRQVVPQQANGADCGCFATAFAYMLSENLPIKYISQADMPAFRQRLVMSIMK 631
            E +A +EE L+ +  +R         +R AE E   A  + E ++ E +  ++E   DE+EE              +   L  G   +V+++ +NVD+ R+ ++   P TWLNDEVINF+  +L +RD ALV      G   + + FFNSFF +K+    NGY + NV+RW+RK  DLF+ DK+F PVN+GN HWC+AVIHM EK+I+Y+DS+ G+G   L  L RYL DE + KKK+  +  GWELV +     PQQ NG+DCG F+  FA  LS N P+ ++ Q D+P  R R+V+ + +
Sbjct:  200 EEIAELEEILRAQHLSRTSKADLLFYNRLAERE---ANTILEEVLLEDIYDIAEDVFDEEEEKSRNKELPPELLEIVENALHEGPMEEVLINKYNVDITRRHLQCMLPGTWLNDEVINFYFQMLSDRDEALV----KAGVLPKRSHFFNSFFYTKV--SENGYNFINVRRWTRKI-DLFAMDKIFMPVNVGNMHWCMAVIHMTEKRIQYYDSMHGSGAACLKVLLRYLHDESEHKKKQKFNDEGWELVTTTPD-TPQQNNGSDCGVFSCMFADYLSLNKPLSFV-QKDIPFHRHRMVLHVSR 489
[Close]
BLAST of NO06G03830 vs. NCBI_GenBank
Match: XP_008892742.1 (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETI45797.1 hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETN20886.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETP43684.1 hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 208.4 bits (529), Expect = 6.600e-50
Identity = 122/302 (40.40%), Postives = 178/302 (58.94%), Query Frame = 0 
Query:  346 EALAAVEETLQVKTEARKKAGGRDRRDRNAEMEIRMAVDVKEAIVRERMAPLSE---DEQEE--------------IHQLLRHGRDTDVVVSGFNVDMRRQDIRTCAPCTWLNDEVINFFMNLLKERDHALVAEAAAKGKERRSNWFFNSFFISKLLDDNNGYKYANVKRWSRKAGDLFSYDKVFFPVNIGNSHWCLAVIHMQEKKIKYFDSLVGTGREYLLHLRRYLEDEHQDKKKKTLDVSGWELVHSDRQVVPQQANGADCGCFATAFAYMLSENLPIKYISQADMPAFRQRLVMSIMK 631
            E +A +EE L+ +  +R         +R AE E   A  + E ++ E +  ++E   DE+EE              +   L  G   +V+++ +NVD+ R+ ++   P TWLNDEVINF+  +L +RD ALV      G   + + FFNSFF +K+    NGY + NV+RW+RK  DLF+ DK+F PVN+GN HWC+AVIHM EK+I+Y+DS+ G+G   L  L RYL DE + KKK+  +  GWELV +     PQQ NG+DCG F+  FA  LS N P+ ++ Q D+P  R R+V+ + +
Sbjct:  199 EEIAELEEILRAQHLSRTSKADLLFYNRLAERE---ANTILEEVLLEDIYDIAEDVFDEEEEKSRNKELPPELLEIVENALHEGPMEEVLINKYNVDITRRHLQCMLPGTWLNDEVINFYFQMLSDRDEALV----KAGVLPKRSHFFNSFFYTKV--SENGYNFINVRRWTRKI-DLFAMDKIFMPVNVGNMHWCMAVIHMTEKRIQYYDSMHGSGAACLKVLLRYLHDESEHKKKQKFNDEGWELVTTTPD-TPQQNNGSDCGVFSCMFADYLSLNKPLSFV-QKDIPFHRHRMVLHVSR 488
[Close]
BLAST of NO06G03830 vs. NCBI_GenBank
Match: XP_008892743.1 (hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >ETI45798.1 hypothetical protein, variant 2 [Phytophthora parasitica P1569] >ETN20887.1 hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >ETP43685.1 hypothetical protein, variant 2 [Phytophthora parasitica P10297])

HSP 1 Score: 208.4 bits (529), Expect = 6.600e-50
Identity = 122/302 (40.40%), Postives = 178/302 (58.94%), Query Frame = 0 
Query:  346 EALAAVEETLQVKTEARKKAGGRDRRDRNAEMEIRMAVDVKEAIVRERMAPLSE---DEQEE--------------IHQLLRHGRDTDVVVSGFNVDMRRQDIRTCAPCTWLNDEVINFFMNLLKERDHALVAEAAAKGKERRSNWFFNSFFISKLLDDNNGYKYANVKRWSRKAGDLFSYDKVFFPVNIGNSHWCLAVIHMQEKKIKYFDSLVGTGREYLLHLRRYLEDEHQDKKKKTLDVSGWELVHSDRQVVPQQANGADCGCFATAFAYMLSENLPIKYISQADMPAFRQRLVMSIMK 631
            E +A +EE L+ +  +R         +R AE E   A  + E ++ E +  ++E   DE+EE              +   L  G   +V+++ +NVD+ R+ ++   P TWLNDEVINF+  +L +RD ALV      G   + + FFNSFF +K+    NGY + NV+RW+RK  DLF+ DK+F PVN+GN HWC+AVIHM EK+I+Y+DS+ G+G   L  L RYL DE + KKK+  +  GWELV +     PQQ NG+DCG F+  FA  LS N P+ ++ Q D+P  R R+V+ + +
Sbjct:   70 EEIAELEEILRAQHLSRTSKADLLFYNRLAERE---ANTILEEVLLEDIYDIAEDVFDEEEEKSRNKELPPELLEIVENALHEGPMEEVLINKYNVDITRRHLQCMLPGTWLNDEVINFYFQMLSDRDEALV----KAGVLPKRSHFFNSFFYTKV--SENGYNFINVRRWTRKI-DLFAMDKIFMPVNVGNMHWCMAVIHMTEKRIQYYDSMHGSGAACLKVLLRYLHDESEHKKKQKFNDEGWELVTTTPD-TPQQNNGSDCGVFSCMFADYLSLNKPLSFV-QKDIPFHRHRMVLHVSR 359
[Close]
BLAST of NO06G03830 vs. NCBI_GenBank
Match: ETP15636.1 (hypothetical protein F441_09669 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 208.4 bits (529), Expect = 6.600e-50
Identity = 122/302 (40.40%), Postives = 178/302 (58.94%), Query Frame = 0 
Query:  346 EALAAVEETLQVKTEARKKAGGRDRRDRNAEMEIRMAVDVKEAIVRERMAPLSE---DEQEE--------------IHQLLRHGRDTDVVVSGFNVDMRRQDIRTCAPCTWLNDEVINFFMNLLKERDHALVAEAAAKGKERRSNWFFNSFFISKLLDDNNGYKYANVKRWSRKAGDLFSYDKVFFPVNIGNSHWCLAVIHMQEKKIKYFDSLVGTGREYLLHLRRYLEDEHQDKKKKTLDVSGWELVHSDRQVVPQQANGADCGCFATAFAYMLSENLPIKYISQADMPAFRQRLVMSIMK 631
            E +A +EE L+ +  +R         +R AE E   A  + E ++ E +  ++E   DE+EE              +   L  G   +V+++ +NVD+ R+ ++   P TWLNDEVINF+  +L +RD ALV      G   + + FFNSFF +K+    NGY + NV+RW+RK  DLF+ DK+F PVN+GN HWC+AVIHM EK+I+Y+DS+ G+G   L  L RYL DE + KKK+  +  GWELV +     PQQ NG+DCG F+  FA  LS N P+ ++ Q D+P  R R+V+ + +
Sbjct:  200 EEIAELEEILRAQHLSRTSKADLLFYNRLAERE---ANTILEEVLLEDIYDIAEDVFDEEEEKSRNKELPPELLEIVENALHEGPMEEVLINKYNVDITRRHLQCMLPGTWLNDEVINFYFQMLSDRDEALV----KAGVLPKRSHFFNSFFYTKV--SENGYNFINVRRWTRKI-DLFAMDKIFMPVNVGNMHWCMAVIHMTEKRIQYYDSMHGSGAACLKVLLRYLHDESEHKKKQKFNDEGWELVTTTPD-TPQQNNGSDCGVFSCMFADYLSLNKPLSFV-QKDIPFHRHRMVLHVSR 489
[Close]
BLAST of NO06G03830 vs. NCBI_GenBank
Match: ETP15637.1 (hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 208.4 bits (529), Expect = 6.600e-50
Identity = 122/302 (40.40%), Postives = 178/302 (58.94%), Query Frame = 0 
Query:  346 EALAAVEETLQVKTEARKKAGGRDRRDRNAEMEIRMAVDVKEAIVRERMAPLSE---DEQEE--------------IHQLLRHGRDTDVVVSGFNVDMRRQDIRTCAPCTWLNDEVINFFMNLLKERDHALVAEAAAKGKERRSNWFFNSFFISKLLDDNNGYKYANVKRWSRKAGDLFSYDKVFFPVNIGNSHWCLAVIHMQEKKIKYFDSLVGTGREYLLHLRRYLEDEHQDKKKKTLDVSGWELVHSDRQVVPQQANGADCGCFATAFAYMLSENLPIKYISQADMPAFRQRLVMSIMK 631
            E +A +EE L+ +  +R         +R AE E   A  + E ++ E +  ++E   DE+EE              +   L  G   +V+++ +NVD+ R+ ++   P TWLNDEVINF+  +L +RD ALV      G   + + FFNSFF +K+    NGY + NV+RW+RK  DLF+ DK+F PVN+GN HWC+AVIHM EK+I+Y+DS+ G+G   L  L RYL DE + KKK+  +  GWELV +     PQQ NG+DCG F+  FA  LS N P+ ++ Q D+P  R R+V+ + +
Sbjct:  199 EEIAELEEILRAQHLSRTSKADLLFYNRLAERE---ANTILEEVLLEDIYDIAEDVFDEEEEKSRNKELPPELLEIVENALHEGPMEEVLINKYNVDITRRHLQCMLPGTWLNDEVINFYFQMLSDRDEALV----KAGVLPKRSHFFNSFFYTKV--SENGYNFINVRRWTRKI-DLFAMDKIFMPVNVGNMHWCMAVIHMTEKRIQYYDSMHGSGAACLKVLLRYLHDESEHKKKQKFNDEGWELVTTTPD-TPQQNNGSDCGVFSCMFADYLSLNKPLSFV-QKDIPFHRHRMVLHVSR 488
[Close]
BLAST of NO06G03830 vs. NCBI_GenBank
Match: ETP15638.1 (hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 208.4 bits (529), Expect = 6.600e-50
Identity = 122/302 (40.40%), Postives = 178/302 (58.94%), Query Frame = 0 
Query:  346 EALAAVEETLQVKTEARKKAGGRDRRDRNAEMEIRMAVDVKEAIVRERMAPLSE---DEQEE--------------IHQLLRHGRDTDVVVSGFNVDMRRQDIRTCAPCTWLNDEVINFFMNLLKERDHALVAEAAAKGKERRSNWFFNSFFISKLLDDNNGYKYANVKRWSRKAGDLFSYDKVFFPVNIGNSHWCLAVIHMQEKKIKYFDSLVGTGREYLLHLRRYLEDEHQDKKKKTLDVSGWELVHSDRQVVPQQANGADCGCFATAFAYMLSENLPIKYISQADMPAFRQRLVMSIMK 631
            E +A +EE L+ +  +R         +R AE E   A  + E ++ E +  ++E   DE+EE              +   L  G   +V+++ +NVD+ R+ ++   P TWLNDEVINF+  +L +RD ALV      G   + + FFNSFF +K+    NGY + NV+RW+RK  DLF+ DK+F PVN+GN HWC+AVIHM EK+I+Y+DS+ G+G   L  L RYL DE + KKK+  +  GWELV +     PQQ NG+DCG F+  FA  LS N P+ ++ Q D+P  R R+V+ + +
Sbjct:   70 EEIAELEEILRAQHLSRTSKADLLFYNRLAERE---ANTILEEVLLEDIYDIAEDVFDEEEEKSRNKELPPELLEIVENALHEGPMEEVLINKYNVDITRRHLQCMLPGTWLNDEVINFYFQMLSDRDEALV----KAGVLPKRSHFFNSFFYTKV--SENGYNFINVRRWTRKI-DLFAMDKIFMPVNVGNMHWCMAVIHMTEKRIQYYDSMHGSGAACLKVLLRYLHDESEHKKKQKFNDEGWELVTTTPD-TPQQNNGSDCGVFSCMFADYLSLNKPLSFV-QKDIPFHRHRMVLHVSR 359
The following BLAST results are available for this feature:
BLAST of NO06G03830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26369.13.500e-14453.01sentrin-specific protease 1 [Nannochloropsis gadit... [more]
ETL92282.15.100e-5040.40hypothetical protein L917_09368 [Phytophthora para... [more]
ETL92283.15.100e-5040.40hypothetical protein, variant 1 [Phytophthora para... [more]
ETL92284.15.100e-5040.40hypothetical protein, variant 2 [Phytophthora para... [more]
XP_008892741.16.600e-5040.40hypothetical protein PPTG_01258 [Phytophthora para... [more]
XP_008892742.16.600e-5040.40hypothetical protein, variant 1 [Phytophthora para... [more]
XP_008892743.16.600e-5040.40hypothetical protein, variant 2 [Phytophthora para... [more]
ETP15636.16.600e-5040.40hypothetical protein F441_09669 [Phytophthora para... [more]
ETP15637.16.600e-5040.40hypothetical protein, variant 1 [Phytophthora para... [more]
ETP15638.16.600e-5040.40hypothetical protein, variant 2 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000094NSK000094Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G03830.1NO06G03830.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597797gene_6714Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100031g30gene4149Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G03830.1NO06G03830.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G03830 ID=NO06G03830|Name=NO06G03830|organism=Nannochloropsis oceanica|type=gene|length=2060bp
AACAGGCAATGAATCGCAGTGGCTACATTAGTAGGCCTTCCCTCTTTCCG
CGGCTGAAATCGGGCAGCAGGGACGACGGAGCAGGCGGGTACAGCAGCAG
CACCAGCATCAGCACAAGCAGTAGCACCAGCATGGGCAAGAACGTCTCGT
CCTCCTCGTCTTGGGGTTTTTGGGGCAAAACACCACCACCGCCGAGTAGC
AGCAGCAGCGGTTTGACGACCGTGAATCGCGGCGGACAGGCTTTCTCATC
TTCTGTCCCTTTCAGCTGCACTACCCCCAGCAGCAACCACTCAAGTTCCC
TGTCTTCCCTCTCTTCCGAACAGTGCGAGCAGGCCTACCAGATCATTGAC
GCCGGATTCTGGCGCTTCGTGGACCGCGTTATTTTCGCTCGGACTGCTAC
GAAGGACCGCGCACCGTTGGTGGAGCTTGTCGAGGGCATCCGCACCGCAC
CCTACCTGCTCAATCTCTACGGCCAAGATCAAATTGATGAAATGCTGGCC
CTCGTTGAAGCCAACGCAAATTATGTGACCTTGCCGCATGGACCGTCCAA
GATGCTCCAAGTGACTTGGGTGACGTTGCCCGAGTTCAAGAGGATGTGTT
CTTCTGTATCTGCTGCTCCTAATCCTGCTCCTGCCGTCACCCCTACTTCC
GGCACAGCCACCAGCAATAGCAACAGCGGTAGCAGCAGCTGTAGCAGCAG
TATCATCCGTATGAGAGGCCAGGCTGGCTCTCCGAAACGCCGTCGTGCCA
ACCCCGGTCATGAAGGCGGTCTAGCTCTGTCCAGACCCACCACCACCACC
ACCTCTTCCTCCTCTTCCTCCTCATCCTCCTCCTCCTCTTCCTCTCCTTC
CTCCTCCTCACGCCGCCTCTCCATCGCCACCGGTCTGGATATGAATAAGG
AAAAGCTGCTGTCACTGCTTCAGGACATTTCAGATGAATACCACGTACAG
GAAGGATCGCACGCAGAGGAGGAAGCTGCAGGGTCAGAGGCAAGGGTGGA
GGGAGTCCTGGCGGCCTTTGGCGCCCGGCAAGATCCGATGCGGGAGGCAT
TGGCTGCGGTGGAAGAGACGCTGCAAGTAAAGACGGAGGCGAGAAAGAAG
GCGGGGGGAAGGGATCGAAGGGACAGAAACGCGGAGATGGAGATACGGAT
GGCGGTGGATGTAAAGGAGGCAATAGTGAGGGAGCGTATGGCCCCGCTGT
CGGAGGATGAGCAGGAAGAGATTCATCAGTTGTTGCGGCACGGAAGGGAC
ACTGACGTGGTAGTAAGCGGGTTTAACGTGGATATGCGACGCCAAGACAT
CCGGACGTGTGCCCCTTGCACCTGGTTGAACGACGAGGTGATCAACTTTT
TCATGAATCTGCTCAAGGAAAGAGACCATGCTTTGGTAGCAGAGGCAGCG
GCCAAGGGGAAAGAGAGGCGTAGCAACTGGTTTTTCAACTCCTTCTTCAT
CAGTAAGCTTCTTGACGACAACAATGGGTATAAATACGCGAATGTCAAGC
GTTGGTCTCGCAAGGCCGGGGATTTGTTCAGCTACGACAAGGTCTTTTTC
CCTGTCAATATTGGTAATTCGCACTGGTGCCTCGCTGTCATTCACATGCA
AGAAAAAAAGATCAAGTACTTCGATTCTCTTGTAGGCACCGGTCGAGAAT
ACCTCCTCCACCTCCGCCGATACCTGGAGGATGAGCATCAGGATAAAAAG
AAAAAGACGTTGGATGTGAGTGGGTGGGAATTGGTTCATTCGGACAGGCA
AGTGGTGCCCCAGCAGGCTAACGGTGCGGATTGTGGCTGTTTTGCTACAG
CATTCGCCTACATGTTGAGCGAAAATTTGCCGATCAAGTACATCTCACAG
GCAGACATGCCGGCATTCAGGCAGCGGTTGGTCATGAGCATTATGAAGAA
GGCGCTGACTTGGTGAGATAGGTAGGGAGGGGTAGAGGTAGGGATGAAAA
GACAGCGAAAACATAGGCCAACTGTCCAGCATCCAATACCTAAGAGAGTG
AGCAATAAATTGCAACATACAAGCGTCACAAACATTAAAGCAACACCAAA
ATCATTGTAA
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protein sequence of NO06G03830.1

>NO06G03830.1-protein ID=NO06G03830.1-protein|Name=NO06G03830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=636bp
MNRSGYISRPSLFPRLKSGSRDDGAGGYSSSTSISTSSSTSMGKNVSSSS
SWGFWGKTPPPPSSSSSGLTTVNRGGQAFSSSVPFSCTTPSSNHSSSLSS
LSSEQCEQAYQIIDAGFWRFVDRVIFARTATKDRAPLVELVEGIRTAPYL
LNLYGQDQIDEMLALVEANANYVTLPHGPSKMLQVTWVTLPEFKRMCSSV
SAAPNPAPAVTPTSGTATSNSNSGSSSCSSSIIRMRGQAGSPKRRRANPG
HEGGLALSRPTTTTTSSSSSSSSSSSSSSPSSSSRRLSIATGLDMNKEKL
LSLLQDISDEYHVQEGSHAEEEAAGSEARVEGVLAAFGARQDPMREALAA
VEETLQVKTEARKKAGGRDRRDRNAEMEIRMAVDVKEAIVRERMAPLSED
EQEEIHQLLRHGRDTDVVVSGFNVDMRRQDIRTCAPCTWLNDEVINFFMN
LLKERDHALVAEAAAKGKERRSNWFFNSFFISKLLDDNNGYKYANVKRWS
RKAGDLFSYDKVFFPVNIGNSHWCLAVIHMQEKKIKYFDSLVGTGREYLL
HLRRYLEDEHQDKKKKTLDVSGWELVHSDRQVVPQQANGADCGCFATAFA
YMLSENLPIKYISQADMPAFRQRLVMSIMKKALTW*
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Synonyms
Publications