NO06G03620, NO06G03620 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO06G03620 vs. NCBI_GenBank
Match: EWM26368.1 (hypothetical protein Naga_100031g4 [Nannochloropsis gaditana]) HSP 1 Score: 357.1 bits (915), Expect = 5.800e-95 Identity = 193/327 (59.02%), Postives = 230/327 (70.34%), Query Frame = 0 Query: 1 MADPFDGLFGDLPAA----------AKKEELNITNETQRQQKRPAPPHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAIKPATLDLEEALDKITRALTSTKLEKSRKALGLLTKLMTGNINAENAAQFHATIAFFMAVDGTWDRLLGPAAEDRAQAVQLLSLVKEHILLFGPEEQYRAATWILLGLLRSEMLTDDTFEFRRAARNIKEYIVALQAIDDEQETYADKERRRAILACLATALRHNFHSWAKPSIEDLFKAATEKRMVFPEDEREELDEMSTRLRQTARGLSVNPTGTVISRSVRMVNSMATPFNTKKGDIYR 318 M+DP DGLFGDLP+ A + E + E + +QKR A T A +P TL+L EAL KITRALTS KLEKSRKA+GLLTKL+T +N ENA+QFHA + FFMA +G W+RLLGP AEDRA A LL+ V+E ILLF P QYRAA+WIL+GLLR E+LTDDTF FRRAAR I+EY+ AL+ + E +T AD+ERR+AILACL TAL+ NFHSWAK SIE+LFKA EKR+ FPE+EREELDEM+T+LR ARGLSVNP+GTV+SRSVRMVNSMATPFNTKKGD++R Sbjct: 1 MSDPLDGLFGDLPSTTREASSSQRPAPQHEQSKAQEQRLRQKRAA---TAPGSSVDNEQAKEMVHGPEAKRAREKEGCPSPPMAVSEPKTLELHEALQKITRALTSPKLEKSRKAMGLLTKLLTAEMNTENASQFHAALGFFMASEGVWERLLGPGAEDRALAHALLAAVRERILLFEPSAQYRAASWILVGLLRPELLTDDTFAFRRAARRIREYVTALEKL-REGDTLADRERRKAILACLRTALKQNFHSWAKASIEELFKATAEKRLCFPEEEREELDEMATKLRTEARGLSVNPSGTVVSRSVRMVNSMATPFNTKKGDVFR 323
BLAST of NO06G03620 vs. NCBI_GenBank
Match: CBJ49222.1 (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 92.4 bits (228), Expect = 2.700e-15 Identity = 83/270 (30.74%), Postives = 123/270 (45.56%), Query Frame = 0 Query: 77 KPATLDLEEALDKITRALTSTKLEKSRKALGLLTKLMTGNINAENAAQFHATIAFFMAVDGTWDRLLGPAA----EDRAQAVQLLSLVKEHILLFGPEEQYRAATWILLGLLRSEMLTDDTFEFRRAARNIKEYIVALQAI----------------------DDEQETYADKERRRAILACLATALRHNFHSWAKPSIEDLFKAATEKRMVFPE-DEREELDEMSTRLRQTARGLSVNPTGTVI--SRSVRMVNSMATPFNTKKGDIYR 318 K T+D+ +L K+ + K K+ KA L+ LM ++ ENA FF A+ + G AA E A+A + L+ + + P E RA TW LL LR + TDD+F F RA + ++E I AL + ER+ A++ + A + +WA+ SIE FKAA ++R +FPE D R+ LD+ + + + R NP G + SRSVR NS A P K+ D+ R Sbjct: 229 KTQTVDVAASLQKLKVFILKPK--KAAKAASLMADLMEAHLRPENARM------FFRALKPLAEEPAGEAALAAGEGGARAFRKLA-QRASEWVGAPSEGVRAVTWELLFGLRHDTKTDDSFTFARAIKRLREAIEALGGVTGGXXXXXXXXXXXXXXXXXXXXXGNRVSLSLERKTALILVMKEAFKSYHLAWARSSIEPAFKAAADRRRLFPEGDLRDTLDDFTDAITKRQR----NPGGLMAPPSRSVRAHNSTAHPMLNKRSDVIR 485
BLAST of NO06G03620 vs. NCBI_GenBank
Match: CCI44152.1 (unnamed protein product [Albugo candida] >CCI42689.1 unnamed protein product [Albugo candida]) HSP 1 Score: 79.0 bits (193), Expect = 3.000e-11 Identity = 61/223 (27.35%), Postives = 108/223 (48.43%), Query Frame = 0 Query: 82 DLEEALDKITRALTSTKLEKSRKALGLLTKLMTGNINAENAAQFHATIAFFMAVDGTWDRLLGPAAEDRAQAVQLLSLVKEHILLFGPEEQYRAATWILLGLLRSEMLTDDTFEFRRAARNIKEYIVALQAIDDEQETYADKERRRAILACLATALRHNFHSWAKPSIEDLFKAATEKRMVFPEDEREELDEMSTRLRQTARGLSVNPTGTVISRSVRMVNSM 305 DLE +L+K+ R + ST + KA L +LM + + + A+QF A I FM LL + A + ++++ L E + W L + ++LTDDT+ F RA + I+E + + I ++ D ++ L T ++ + SWAK ++E + AT KR FPE +REELD + ++ + + + + R+++ +SM Sbjct: 103 DLEVSLNKLQRCMKST--SRFPKASELFCQLMDRHFDCDTASQFSACIDTFMT-----HELLAKWSGSLALNRLITRILRDENALHLTSESTK--NWTLAAITHYDLLTDDTYVFVRATKVIRERV---ENITEKSLRQDDDSELHLLMPILKTLVKKHTISWAKTAVESVVSVATSKRAYFPEKQREELDGWTACIQNRNNAVDIQRCSS-LRRNIKEQDSM 312
BLAST of NO06G03620 vs. NCBI_GenBank
Match: CCA24706.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 68.2 bits (165), Expect = 5.400e-8 Identity = 53/192 (27.60%), Postives = 92/192 (47.92%), Query Frame = 0 Query: 82 DLEEALDKITRALTSTKLEKSRKALGLLTKLMTGNINAENAAQFHATIAFFMAVDGTWDRLLGPAAEDRAQAVQLLSLVKEHILLFGPEEQYRAATWILLGLLRSEMLTDDTFEFRRAARNIKEYIVALQAIDDEQETYADKERRRAILACLATALRHNFHSWAKPSIEDLFKAATEKRMVFPEDEREELDE 274 DL+ +L K+ R + S + KA L +LM ++NA +QF A + FM D L+ + A + ++K+ L + A W + ++ TDDT+ F RA + I+E + I ++ +K +++ + T ++ + WAK ++E + AT KR FPE +R+ELDE Sbjct: 52 DLDFSLLKLQRCMKSP--SRFPKASELFCQLMDSHLNANTTSQFSACVHTFMTQD-----LVAKWSGSLALYKLTVRILKDKKSLH--VDAGVAKNWTFAAITHYDLHTDDTYVFARATKVIRE---RAENITEKSFYQGEKCELELLMSLIKTLVKKHSILWAKTAVESVVSVATSKRAYFPEKQRQELDE 231
BLAST of NO06G03620 vs. NCBI_GenBank
Match: XP_008618244.1 (hypothetical protein SDRG_13921 [Saprolegnia diclina VS20] >EQC28374.1 hypothetical protein SDRG_13921 [Saprolegnia diclina VS20]) HSP 1 Score: 68.2 bits (165), Expect = 5.400e-8 Identity = 64/215 (29.77%), Postives = 99/215 (46.05%), Query Frame = 0 Query: 75 AIKPATLDLEEALDKITRALTSTKLEKSRKALGLLTKLMTGNINAENAAQFHATI---AFFMAVDGTWDRLLGPAAEDRAQAVQLLSLVKEHILLFGPEEQYRAAT---WILLGLLRSEMLTDDTFEFRRAARNIKEYIVALQAIDDEQETYADKE---RRRAILACLATALRHNFHSWAKPSIEDLFKAATEKRMVFPEDEREELDEMSTRLRQ 281 A KPA LDL + +DKI + K K KA L KL+ + + + T A +D DR+ A + +A+ LL LL PE Y A T W+L +L +++ TDDT+ F +A + + + L D+ E+ D + R + CL T + + SWAK ++E + T R+ FPE R E+D + + Q Sbjct: 50 AAKPA-LDLFQTIDKIKGYMMVDK--KFAKASVLFGKLLVEECSVRSPSDEVMTALLDAIKDVMDAKADRIHHVDARNEFKALVLLVDAHRAALLTAPE--YEADTLDNWVLDAVLHNDLFTDDTYRFAKATKALASH---LDRRDEGVESKNDGDVDALDRVLFPCLRTLMARHTTSWAKTAVELVMHRLTATRLTFPEAYRNEIDLWTQTIHQ 256
BLAST of NO06G03620 vs. NCBI_GenBank
Match: KOO26509.1 (hypothetical protein Ctob_006526 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 68.2 bits (165), Expect = 5.400e-8 Identity = 55/199 (27.64%), Postives = 91/199 (45.73%), Query Frame = 0 Query: 84 EEALDKITR-ALTSTKLEKSRKALGLLTKLM-TGNINAENAAQFHATI-AFFMAVDGTWDRLLGPAAEDRAQAVQLLSLVKEHILLFGPEEQYRAATWILLGLLRSEMLTDDTFEFRRAARNIKEYIVAL----QAIDDEQETYADKERRRA----ILACLATALRHNFHSWAKPSIEDLFKAATEKRMVFPEDEREEL 272 +E +D R A T K K + L+ G + ENA F + A + D+L R +L + LF Q W LL L + ++ TDD+F+F +AA+ ++E + L A++ T+ RRA + CL A+ H+ H+WA+P+ + L KAA ++R + E+++ EL Sbjct: 56 DEIIDGAPRLAAHITSASKFNKVAAMAFALLEAGRVTHENAPAFFTVLQAGLLEPRRLRDKLY------RVAYRKLYAAAISRASLFSASAQQELKRWQLLVLTQIDLHTDDSFQFNKAAKQVREKLEELPCIYPALEPAGVTHLPPSERRAWADVLFECLDAAMSHHKHAWARPTCDTLIKAAIDRRQNWVEEQQSEL 248
BLAST of NO06G03620 vs. NCBI_GenBank
Match: XP_012197307.1 (hypothetical protein SPRG_03340 [Saprolegnia parasitica CBS 223.65] >KDO32123.1 hypothetical protein SPRG_03340 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 67.4 bits (163), Expect = 9.200e-8 Identity = 61/214 (28.50%), Postives = 101/214 (47.20%), Query Frame = 0 Query: 75 AIKPATLDLEEALDKITRALTSTKLEKSRKALGLLTKLMTGNINAENAAQFHATIAFFMAVDGTW----DRLLGPAAEDRAQAVQLLSLVKEHILLFGPEEQYRAAT---WILLGLLRSEMLTDDTFEFRRAARNIKEYIVAL-QAIDDEQETYADKERRRAILACLATALRHNFHSWAKPSIEDLFKAATEKRMVFPEDEREELDEMSTRLRQ 281 A KPA LDL + +DKI + K K KA L KL+ + + ++ T A A+ G DR+ A + +A L+ LV H + +Y A T W+L +L +++ TDDT+ F +A + + ++ + +D + + D + + CL T + + SWAK S+E + T R+ FPE R E+D + + Q Sbjct: 50 AAKPA-LDLFQTIDKIKGYMMVDK--KFAKASVLFGKLLVEECSVRSPSEDVMT-ALLDAIKGVMEAKADRIHHVDARNEFKA--LMMLVDSHRVALLEAPEYEADTIDNWVLDAVLHNDLFTDDTYRFAKATKALATHLDRRDEGVDSKNDGDVD-ALDKVLFPCLRTLMARHATSWAKTSVELVMHRLTATRLKFPEAYRNEIDLWTQTIHQ 256
BLAST of NO06G03620 vs. NCBI_GenBank
Match: XP_004990147.1 (hypothetical protein PTSG_08763 [Salpingoeca rosetta] >EGD77671.1 hypothetical protein PTSG_08763 [Salpingoeca rosetta]) HSP 1 Score: 67.0 bits (162), Expect = 1.200e-7 Identity = 60/223 (26.91%), Postives = 100/223 (44.84%), Query Frame = 0 Query: 78 PATLDLEEA------LDKITRALTSTKLEKSRKALGLLTKLMTGNINAENAAQFHATIAFFMAVDGTWDRLLGPAAEDRAQAVQLLSLVKEHILLFGPEEQYRAATWILLGLLRSEMLTDDTFEFRRAARNIKEYIVALQAIDDEQE-------------TYADK-ERRRAILACLATALRHNFHSWAKPSIEDLFKAATEKRMVFPEDEREELDEMSTRLRQ 281 PA L+ EA L K+ L + K KA +L KLM ++ + + +F +D R G A A + SL ++ F + ++ T +L + + TDDT++F +AA+ E I L +Q T A+K ER AI+ L+T +H WAK S++ FK A ++R++F + RE +D+M +++ Sbjct: 68 PAKLEATEAEKRKVLLKKLNTLLLDDR--KFPKAAPVLCKLMETDLRRDTSEEF---FPLLQKLDALASRRQGNPASMAAYR-DIFSLAHRNMDAFSDKHTFQLRTMVLYHVTCHRLNTDDTYQFAQAAKVAHEAIEQLDTAFPKQSDILLGMEITQYVPTDAEKRERLDAIVRVLSTLFQHRKKQWAKTSVDLAFKLAGDRRLIFDQVNRERIDDMYDSIKE 284
BLAST of NO06G03620 vs. NCBI_GenBank
Match: OQR85396.1 (hypothetical protein ACHHYP_11884 [Achlya hypogyna]) HSP 1 Score: 67.0 bits (162), Expect = 1.200e-7 Identity = 43/137 (31.39%), Postives = 66/137 (48.18%), Query Frame = 0 Query: 147 AEDRAQAVQLLSLVKEH--ILLFGPE-EQYRAATWILLGLLRSEMLTDDTFEFRRAARNIKEYIVALQAIDDEQETYADKERRRAILACLATALRHNFHSWAKPSIEDLFKAATEKRMVFPEDEREELDEMSTRLRQ 281 A+ R L LV+ H LL PE E W+L +L +E+ TDD+F F +AA+ I ++ + +A+ CL T + + SWAK S+E + T RM FPE+ R E+D + ++ Q Sbjct: 120 ADARHDFKSLFDLVQTHRAALLTAPEYEDDTLDNWVLTSVLHNELFTDDSFGFAKAAKAISTHLDRRSHGVENANELDVAGLDKALFPCLRTLMTRHSTSWAKTSVELVMNRLTATRMSFPEELRAEIDSWTQQIHQ 256
BLAST of NO06G03620 vs. NCBI_GenBank
Match: XP_005785283.1 (hypothetical protein EMIHUDRAFT_364188 [Emiliania huxleyi CCMP1516] >EOD32854.1 hypothetical protein EMIHUDRAFT_364188 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 65.1 bits (157), Expect = 4.500e-7 Identity = 56/200 (28.00%), Postives = 92/200 (46.00%), Query Frame = 0 Query: 82 DLEEALDKITRALTSTKLEKSRKALGLLTKLMTGNINAENAAQFHATIAFFMAVDGTWDRLLGPAAEDRAQAVQLLSLVKEHILLFGPEEQYRAATWILLGLLRSEMLTDDTFEFRRAARNIKEYIVALQAIDDEQET-----YADKERRR---AILACLATALRHNFHSWAKPSIEDLFKAATEKRMVFPEDEREELDE 274 ++ A ++ + + S K + +R A L + L +G +NAENA+ F + +A G A E R +L LFG EE+ W L L++ ++ TDDTF+F + R + + L E + ER R AI C+ A + H+WA+ S++ L KAA E+R F +++ L + Sbjct: 131 EITSAAPRLAQHICSPK-KFNRVAAMLYSLLESGRVNAENASAFFSVLA-----AGVSTPRACRARELRVAYRRLYLSASLKESLFGAEERAMIDVWRLRVLVQIDLCTDDTFQFAGSVRKVIAKLEQLPCFYPALEPAGAVHLPEAERGRWIDAIFDCVDAAFEQHKHAWARSSVDLLVKAAVERRQNFSAPQQQVLQQ 324 The following BLAST results are available for this feature:
BLAST of NO06G03620 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 10
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G03620 ID=NO06G03620|Name=NO06G03620|organism=Nannochloropsis oceanica|type=gene|length=954bpback to top protein sequence of NO06G03620.1 >NO06G03620.1-protein ID=NO06G03620.1-protein|Name=NO06G03620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=318bpback to top Synonyms
Publications
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