NO06G03260, NO06G03260 (gene) Nannochloropsis oceanica

Overview
NameNO06G03260
Unique NameNO06G03260
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2025
Alignment locationchr6:908730..910754 -

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Properties
Property NameValue
DescriptionWD40 repeat containing protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:908730..910754 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR001680WD40_repeat
Homology
BLAST of NO06G03260 vs. NCBI_GenBank
Match: EWM26320.1 (WD40 repeat containing protein [Nannochloropsis gaditana])

HSP 1 Score: 567.4 bits (1461), Expect = 4.300e-158
Identity = 279/458 (60.92%), Postives = 337/458 (73.58%), Query Frame = 0
Query:   40 PRRTVVCAHATLPCVRSQASGAAPPRKSRVTPPDMSFSARSHRAGVAHRGFVYPPLNPAGDMCDASDRPLLCMSLSKDETEFVVGSADHALYAYSLKTCKPTRKLYTKAHGHIDWVSCVAHMDDGRILSGGGDGKVCWWPAAR--SSSFTMRGGGSMAGLSGQSATSGNSLTVSEDLDGHASAVSKILPVPNSQMAFSSGYDGLIKLWNMKSKRTLTFDAGSAS--------RGIIMTGDSPGSGNALDPVMDFCFDEDKEQLISGTRKGTCNVWDLQTANQVGALKAAHRGPVSCMMRWSASNIVTGGQDGTVKVFDTRRGIPLVAHKVNCHIDPTQGTTGAVSCLEKAGGLLATGGGDNRVCLLDPRMNFKALHVFRNHHAPVFSLKYTLASESPVLFTGAGDGVLHCVNLLSRQELYSLQPTQGAVRAIASTTHLEENKKLVVACEDGKAVIFTF 488
            P  T V  H TLP +R + + A   R+ R+ PP+  F    H  G  HR F   PLN AG+MCDASDRPLLC+SLSKDE E VVGSADHALYAY+L+TCKPTRKLY+KAHGHIDWV+CV HMD+G++LSGGGDGK+C WP +R   SSF ++     A    +     N LT  +DLDGHAS+VSKILPVP S MAFS  YDGLIKLWN+ SK+ LTFDA   S        +  + +  S      LDPV+DF FD +++QL+SGTRKG C VWDL TA Q+G ++AAHRGPV+C+ RWSAS +VTGGQDG VKV+DTRRG+PLV   V CH++P QGT+ AVSCLEK GGLLATGG D RVCLLDPR NF+ LHVF +H AP+++L+Y +++ESPVLF+GAGDG +HCVNLLS   LY L PT G VRA+A+TTHL+ +KKLV A EDGK VIF F
Sbjct:   13 PSCTGVGTHPTLPSIRGRIT-ALKTRQPRIMPPETLFPMGYHHTGPMHRSFARGPLNGAGEMCDASDRPLLCLSLSKDEEELVVGSADHALYAYNLQTCKPTRKLYSKAHGHIDWVTCVVHMDNGQVLSGGGDGKICVWPPSRLSPSSFPLKHNEDGA---YKRPACPNRLTHCQDLDGHASSVSKILPVPESDMAFSGSYDGLIKLWNLTSKQALTFDAEGRSTKSNWSFGKNGVASDHSLSRCGTLDPVLDFAFDTEQKQLMSGTRKGNCKVWDLHTAKQIGTVRAAHRGPVTCLTRWSASIMVTGGQDGVVKVWDTRRGMPLVTQAVCCHVNPVQGTSSAVSCLEKTGGLLATGGADKRVCLLDPRRNFQTLHVFDHHQAPIYTLRYAISAESPVLFSGAGDGTVHCVNLLSNAVLYGLHPTWGPVRALATTTHLQADKKLVAAGEDGKVVIFRF 466          
BLAST of NO06G03260 vs. NCBI_GenBank
Match: GAY03697.1 (Hypothetical protein PINS_011503 [Pythium insidiosum])

HSP 1 Score: 200.7 bits (509), Expect = 1.100e-47
Identity = 141/450 (31.33%), Postives = 211/450 (46.89%), Query Frame = 0
Query:   49 ATLPCVRSQASGAAPPRKSRVTPPDMSFSARSHRAGVA--HRGFVYPPLNPAGDMCDASDRPLLCMSLSKDETEFVVGSADHALYAY-----SLKTCKPTRKLYTKAHGHIDWVSCVAHMDDGRILSGGGDGKVCWWPAARSSSFTMRGGGSMAGLSGQSATSGNSLTVSEDLDGHASAVSKILPVPNSQMAFSSGYDGLIKLWNMKSKRTLTFDAGSASRGIIMTGDSPGSGNALDPVMDFCFDEDKEQLISGTRKGTCNVWDLQTANQVGALKAAHRGPVSCMMRWSASNIVT---GGQDGTVKVFDTRRGIPLVAHKVNCHIDPTQGTTGAVSCLEKA---GGLLATGGGDNRVCLLDPRMNFKALHVFRNHHAPVFSLKYTLASESPVLFTGAGDGVLHCVNLLSRQELYSLQPTQGAVRAIASTTHLEENKKLVVACEDGKAVIF 486
            AT P +    +  AP    +    D+  ++ +   G       ++  P  P G +   S +PLLCMS+S+D+ E VVGS+DHALY       S +     R LY K  GH +WV+  A++ DGRILSGG D K+C W A                               EDL GH+ +VS +L V + ++A S+ YD  ++LWN+  K +    +     G++  G +P     +  +  F       Q ++G R G  +V DL     +  L  AH+G  + ++     +  T   GGQDG VKV+D R+     AH V  HID   G  GAV  LE+      +L TGG D  + +LD R + + L  F  H        Y L     + F+GAG+G+LH  +  + + LY L   + AVRAIA+T       +L+ A +DG  +++
Sbjct:   74 ATAPTMIDDTNKRAPSSAKQHAVRDLETASPAPELGHGDLSGAWLRGPAAPEGTVHSVSAQPLLCMSVSRDQREIVVGSSDHALYTIPLGGGSTRGGSRGRTLYAKKFGHAEWVTTAAYLPDGRILSGGMDSKLCLWDATG--------------------------VKCEDLVGHSGSVS-LLSVLSPELAISASYDKTVRLWNVSRKAS----SRQRDAGVVKVGAAP-----ILALSAF----GSAQAVTGDRDGAVHVVDLVETKVLRKLPNAHKGHTTSVLASRFDDCTTAFSGGQDGVVKVWDLRQKAATPAHAVELHIDRKSGKAGAVGFLEEPADDSNVLLTGGADGTIKVLDKRASLRPLFSFNEH----LDFIYALHVRGQLCFSGAGNGMLHVHDWKTGKLLYGLGANKAAVRAIATTA-----TQLIAAGDDGGVIVY 474          
BLAST of NO06G03260 vs. NCBI_GenBank
Match: PNR31762.1 (hypothetical protein PHYPA_025885 [Physcomitrella patens])

HSP 1 Score: 193.0 bits (489), Expect = 2.200e-45
Identity = 134/437 (30.66%), Postives = 209/437 (47.83%), Query Frame = 0
Query:   66 KSRVTPPD--MSFSARSHRAGVAHRGFVYPPLNPAGDMCDASDRPLLCMSLSKDETEFVVGSADHALYAYSLKTCKPTRKLYTKAHGHIDWVSCVAHMDDGRILSGGGDGKVCWWPAARSSSFTMRGGGSMAGLSGQSATSGNSLTVSEDLDGHASAVSKILPVPNSQMAFSSGYDGLIKLWNMKSKRTLTFDAGSASRGIIMTGDSPGSGNALDPVMDFCFDEDKEQLISGTRKGTCNVWDLQTANQVGALKAAHRGPVSCM--------MRWSASN--IVTGGQDGTVKVFDTRRGIPLVAHKVNCHIDP-TQGTTGAVSCLEKA---GGLLATGGGDNRVCLLDPRMNFKALHVFRNHHAPVFSLKYTLASESPVLFTGAGDGVLHCVNLLSRQELYSL-QPTQGAVRAIASTTHLEENKKLVVACEDGKAVIF 486
            +++ TPP        RS       + +++ P +P G + + SDRP LCMS+  +E    +GS+DHALY    + C   R LY K +GH +WV+C  ++ DGRILSGG DGK+C W                           N +  + DL GH +++S +       +A S+ YD  + LWN+   +T             + G          PV+ FC    +  ++SG+R G   +WD   A  +  + +AH+G V+ +          W       +TGGQDG ++ +D R   P+  H    H +  T+G   +++    A   G ++ T G DN + +L+PRM FKALH    H   ++SL        P++++G+GDG L    LL+ Q LY L   ++GAVR I+    L    +LVVA +DG  +I+
Sbjct:  282 QTKFTPPQPPQEVRGRSPSQDYVLQEWMHGPSSPTGQLVNVSDRPSLCMSVRGNEA--CIGSSDHALYIVDCEKCTLKRSLYGKQYGHTEWVTCCDYLKDGRILSGGMDGKLCLW-------------------------DKNGIR-TIDLLGHMASISAVRSGAEGSLAISASYDKTLMLWNVNRSQT--------KNAACLKGHKA-------PVLGFCL-SSQGAIVSGSRDGDVILWDTAHATPLLHVSSAHKGHVTAVECLEDTKNKTWEECREMYLTGGQDGILRAWDFRTRGPV--HSAVLHRNAVTKGAVNSIAVSYTACGSGPIVVTAGADNSMKVLEPRMGFKALHTICTHRDFIYSLYVA----GPLVWSGSGDGSLLVHELLTGQCLYGLGADSKGAVRCIS----LAGPDRLVVAGDDGNVMIY 664          
BLAST of NO06G03260 vs. NCBI_GenBank
Match: XP_024359160.1 (uncharacterized protein LOC112274153 [Physcomitrella patens])

HSP 1 Score: 190.7 bits (483), Expect = 1.100e-44
Identity = 129/410 (31.46%), Postives = 199/410 (48.54%), Query Frame = 0
Query:   91 VYPPLNPAGDMCDASDRPLLCMSLSKDETEFVVGSADHALYAYSLKTCKPTRKLYTKAHGHIDWVSCVAHMDDGRILSGGGDGKVCWWPAARSSSFTMRGGGSMAGLSGQSATSGNSLTVSEDLDGHASAVSKILPVPNSQMAFSSGYDGLIKLWNMKSKRTLTFDAGSASRGIIMTGDSPGSGNALDPVMDFCFDEDKEQLISGTRKGTCNVWDLQTANQVGALKAAHRGPVSCM--------MRWSASN--IVTGGQDGTVKVFDTRRGIPLVAHKVNCHIDP-TQGTTGAVSCLEKA---GGLLATGGGDNRVCLLDPRMNFKALHVFRNHHAPVFSLKYTLASESPVLFTGAGDGVLHCVNLLSRQELYSL-QPTQGAVRAIASTTHLEENKKLVVACEDGKAVIF 486
            ++ P +P G + + SDRP LCMS+  +E    +GS+DHALY    + C   R LY K +GH +WV+C  ++ DGRILSGG DGK+C W                           N +  + DL GH +++S +       +A S+ YD  + LWN+   +T             + G          PV+ FC    +  ++SG+R G   +WD   A  +  + +AH+G V+ +          W       +TGGQDG ++ +D R   P+  H    H +  T+G   +++    A   G ++ T G DN + +L+PRM FKALH    H   ++SL        P++++G+GDG L    LL+ Q LY L   ++GAVR I+    L    +LVVA +DG  +I+
Sbjct:    1 MHGPSSPTGQLVNVSDRPSLCMSVRGNEA--CIGSSDHALYIVDCEKCTLKRSLYGKQYGHTEWVTCCDYLKDGRILSGGMDGKLCLW-------------------------DKNGIR-TIDLLGHMASISAVRSGAEGSLAISASYDKTLMLWNVNRSQT--------KNAACLKGHKA-------PVLGFCL-SSQGAIVSGSRDGDVILWDTAHATPLLHVSSAHKGHVTAVECLEDTKNKTWEECREMYLTGGQDGILRAWDFRTRGPV--HSAVLHRNAVTKGAVNSIAVSYTACGSGPIVVTAGADNSMKVLEPRMGFKALHTICTHRDFIYSLYVA----GPLVWSGSGDGSLLVHELLTGQCLYGLGADSKGAVRCIS----LAGPDRLVVAGDDGNVMIY 356          
BLAST of NO06G03260 vs. NCBI_GenBank
Match: GAQ85255.1 (F-box and WD-40 domain protein 7 [Klebsormidium nitens])

HSP 1 Score: 177.6 bits (449), Expect = 9.600e-41
Identity = 131/415 (31.57%), Postives = 197/415 (47.47%), Query Frame = 0
Query:   94 PLNPAGDMCDASDRPLLCMSLSKDETEFVVGSADHALYAYSLKTCKPTRKLYTKAHGHIDWVSCVAHMDDGRILSGGGDGKVCWWPAARSSSFTMRGGGSMAGLSGQSATSGNSLTVSEDLDGHASAVSKILPVPNSQMAFSSGYDGLIKLWNMKSKRTLTFDAGSASRGIIMTGDSPGSG---------NALDPVMDFCFDEDKEQLISGTRKGTCNVWDLQTANQVGALKAAHRGPVSCMMRWSASN-----------IVTGGQDGTVKVFDTRRGIPLVAHKVNCHIDPTQGTTGAVSCLEKAGGLLATGGGDNRVCLLDPRMNFKALHVFRNHHAPVFSLKYTLASESPVLFTGAGDGVLHCVNLLSRQELYSLQP-TQGAVRAIASTTHLEENKKLVVACEDGKAVIFTF 488
            P++ AG +   S+ P+LCMS+  +E   VVGS+DHA+Y   L T +  R LY K  GH +WV+CV H+ DGRILSGG D ++  W                         S +S+T  E L GH +++S +    +  +A SS YD  +++W +          G+ +RG+   G   GSG           + PV+DF +   K  ++SG R G   +WD+  A     LK AH G V+ ++ WS +             +TGGQDG ++ +D R    +   +V  H+      TGAVS +  A  ++ T G D  V +LDPR +F+     RN         Y+L       F+G GDG +   ++L  + LY L     GAVR I +      + KLV A +DG  + + +
Sbjct:  282 PMDEAGRVTKLSELPILCMSVLGNEA--VVGSSDHAVYTVDLDTGRKKRTLYGKTAGHTEWVTCVTHLPDGRILSGGMDNRLLLW-------------------------SSSSVTHCE-LPGHTASISAVQCSSDGSLAVSSSYDKTLRVWAL---------PGADARGV---GRGKGSGFKGTATCLVGHVAPVLDFAWTAGK--VVSGARDGCVILWDIGAAASSRQLKRAHVGHVTALV-WSDAGGSPQSEERTNLFLTGGQDGFLRAWDGRTDRAVA--EVPVHV--AASGTGAVSSIRVAADVIVTAGADGMVRVLDPRASFRV----RNSLTGPGGFLYSLHVAGRTAFSGGGDGSVLVHDILDGRTLYGLGAINNGAVRCIDT-----GDSKLVCAGDDGTLITYCY 640          
BLAST of NO06G03260 vs. NCBI_GenBank
Match: CCI44661.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 174.9 bits (442), Expect = 6.200e-40
Identity = 127/437 (29.06%), Postives = 204/437 (46.68%), Query Frame = 0
Query:   65 RKSRVTPPDMSFSARSHRAGVAHRGFVYPPLNPAGDMCDASDRPLLCMSLSKDETEFVVGSADHALYAYSL-------KTCKPTRKLYTKAHGHIDWVSCVAHMDDGRILSGGGDGKVCWWPAARSSSFTMRGGGSMAGLSGQSATSGNSLTVSEDLDGHASAVSKILPVP-NSQMAFSSGYDGLIKLWNMKSKRTLTFDAGSASRGIIMTGDSPGSGNALDPVMDFCFDEDKEQLISGTRKGTCNVWDLQTANQVGALKAAHRGPVSCMMRW---SASNIVTGGQDGTVKVFDTRRGIPLVAHKVNCHIDPTQGTTGAVSCLEK---AGG--LLATGGGDNRVCLLDPRMNFKALHVFRNHHAPVFSLKYTLASESPVLFTGAGDGVLHCVNLLSRQELYSLQPTQGAVRAIASTTHLEENKKLVVACEDGKAVIF 486
            +K  ++ P +S   R+   G     +V  P +  G +   SDRPL C+S++  ++  V GS DHALY   +       +     +KLYTK  GH +WV+   ++ D RI+S   D ++C W A                          S T  EDL GHA +++ +  +   S + FS+GYD  +++WN+  +    F   +   G I    +        P++D    +  +++  G R G   V DL+    V A   AHRG  + ++       + I +GGQDG V V+D R+   L +  +  H D  +G  GAV  L +   +GG  +L TGG D  + +LD R + + +H +  H   ++SL  +      + F+G G G+LH  +  +   LY L   Q A+RAI ++     N KLVVA +DG  + +
Sbjct:   72 KKGPISIPSISCELRTISEGDWSGSWVRGPKDAEGCLSSVSDRPLTCLSMNDSQSHVVAGSTDHALYVVPIADNDDKRRRGNGCKKLYTKKCGHSEWVTGALYLSDDRIVSAAMDSRLCLWNA--------------------------SGTNCEDLIGHAGSITLVKNLARESSLVFSAGYDKTVRVWNVGKQ----FRGKTREIGCIKATSA--------PILD-ADTQSAQKITVGDRDGNVRVIDLEKGTVVQAYANAHRGHTTSILGSCDNDRNGIYSGGQDGIVNVWDCRQKKCLAS--LELHTDKKEGKAGAVGFLAEPSHSGGENILITGGADGTINVLDKRQSHQVVHKWIEHQDYIYSLHVS----HQLCFSGDGQGMLHVHDWRNGHLLYGLGANQAAIRAITTS-----NTKLVVAGDDGSILTY 458          
BLAST of NO06G03260 vs. NCBI_GenBank
Match: CCI44662.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 174.9 bits (442), Expect = 6.200e-40
Identity = 127/437 (29.06%), Postives = 204/437 (46.68%), Query Frame = 0
Query:   65 RKSRVTPPDMSFSARSHRAGVAHRGFVYPPLNPAGDMCDASDRPLLCMSLSKDETEFVVGSADHALYAYSL-------KTCKPTRKLYTKAHGHIDWVSCVAHMDDGRILSGGGDGKVCWWPAARSSSFTMRGGGSMAGLSGQSATSGNSLTVSEDLDGHASAVSKILPVP-NSQMAFSSGYDGLIKLWNMKSKRTLTFDAGSASRGIIMTGDSPGSGNALDPVMDFCFDEDKEQLISGTRKGTCNVWDLQTANQVGALKAAHRGPVSCMMRW---SASNIVTGGQDGTVKVFDTRRGIPLVAHKVNCHIDPTQGTTGAVSCLEK---AGG--LLATGGGDNRVCLLDPRMNFKALHVFRNHHAPVFSLKYTLASESPVLFTGAGDGVLHCVNLLSRQELYSLQPTQGAVRAIASTTHLEENKKLVVACEDGKAVIF 486
            +K  ++ P +S   R+   G     +V  P +  G +   SDRPL C+S++  ++  V GS DHALY   +       +     +KLYTK  GH +WV+   ++ D RI+S   D ++C W A                          S T  EDL GHA +++ +  +   S + FS+GYD  +++WN+  +    F   +   G I    +        P++D    +  +++  G R G   V DL+    V A   AHRG  + ++       + I +GGQDG V V+D R+   L +  +  H D  +G  GAV  L +   +GG  +L TGG D  + +LD R + + +H +  H   ++SL  +      + F+G G G+LH  +  +   LY L   Q A+RAI ++     N KLVVA +DG  + +
Sbjct:   28 KKGPISIPSISCELRTISEGDWSGSWVRGPKDAEGCLSSVSDRPLTCLSMNDSQSHVVAGSTDHALYVVPIADNDDKRRRGNGCKKLYTKKCGHSEWVTGALYLSDDRIVSAAMDSRLCLWNA--------------------------SGTNCEDLIGHAGSITLVKNLARESSLVFSAGYDKTVRVWNVGKQ----FRGKTREIGCIKATSA--------PILD-ADTQSAQKITVGDRDGNVRVIDLEKGTVVQAYANAHRGHTTSILGSCDNDRNGIYSGGQDGIVNVWDCRQKKCLAS--LELHTDKKEGKAGAVGFLAEPSHSGGENILITGGADGTINVLDKRQSHQVVHKWIEHQDYIYSLHVS----HQLCFSGDGQGMLHVHDWRNGHLLYGLGANQAAIRAITTS-----NTKLVVAGDDGSILTY 414          
BLAST of NO06G03260 vs. NCBI_GenBank
Match: CCA16936.1 (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 171.0 bits (432), Expect = 9.000e-39
Identity = 126/409 (30.81%), Postives = 192/409 (46.94%), Query Frame = 0
Query:   94 PLNPAGDMCDASDRPLLCMSLSKDETEFVVGSADHALYAYSL-------KTCKPTRKLYTKAHGHIDWVSCVAHMDDGRILSGGGDGKVCWWPAARSSSFTMRGGGSMAGLSGQSATSGNSLTVSEDLDGHASAVSKILPVP-NSQMAFSSGYDGLIKLWNMKSKRTLTFDAGSASRGIIMTGDSPGSGNALDPVMDFCFDEDKEQLIS-GTRKGTCNVWDLQTANQVGALKAAHRGPVSCMMRWS---ASNIVTGGQDGTVKVFDTRRGIPLVAHKVNCHIDPTQGTTGAVSCLEKAGGL-----LATGGGDNRVCLLDPRMNFKALHVFRNHHAPVFSLKYTLASESPVLFTGAGDGVLHCVNLLSRQELYSLQPTQGAVRAIASTTHLEENKKLVVACEDGKAVIF 486
            P +P G +   SDRPL C+SLS  ++  VVGS DHALYA  +       +  K  +KLY+K  GH +WV+   ++ D RI+S   D ++C W A                          S T  EDL GHA ++S I  +   S   FS+GYD  +++WN+ ++    F   +   G I    +        P++D   D    Q I+ G R G   V DL+    V A   AHRG  + ++       + I +GGQDG V V+D R+   L +  +  H D  +G +GAV  L +   L     L T G D  + +LD R + K +H +  H   ++SL  +      + F+G G G+LH  +  +   LY +   + A+RAI ++     +  LVVA +DG  + +
Sbjct:  102 PKDPEGSLSSVSDRPLTCLSLSDSQSHVVVGSTDHALYAIPVAHNGDRNRRGKGFKKLYSKQCGHSEWVTGALYLPDDRIVSAAMDSRLCLWNA--------------------------SGTKCEDLVGHAGSISLIKDLARESSCVFSAGYDKTVRVWNVANQ----FRGKTREMGCIKASSA--------PILD--ADTLNAQTITVGDRDGNVRVIDLERGTVVQAYSNAHRGHTTSVLGSRDDIGNGIYSGGQDGIVNVWDCRQKKCLAS--LELHNDKKKGKSGAVGFLAEPSHLGGDNTLITAGADGTINVLDKRQSHKVMHKWTEHRDFIYSLHVS----HQLCFSGDGRGMLHVHDWKNGNLLYGIGANRAAIRAITTS-----DDALVVAGDDGSVLTY 459          
BLAST of NO06G03260 vs. NCBI_GenBank
Match: CCC48444.1 (conserved hypothetical protein [Trypanosoma vivax Y486])

HSP 1 Score: 170.2 bits (430), Expect = 1.500e-38
Identity = 125/401 (31.17%), Postives = 186/401 (46.38%), Query Frame = 0
Query:   94 PLNPAGDMCDASDRPLLCMSLSKDETEFVVGSADHALYAYSLKTCKPTRKLYTKAHGHIDWVSCVAH-MDDGRILSGGGDGKVCWWPAARSSSFTMRGGGSMAGLSGQSATSGNSLTVSEDLDGHASAVSKILPVPNSQMAFSSGYDGLIKLWNMKSKRTLTFDAGSASRGIIMTGDSPGSGNALDPVMDFCFDEDKEQLISGTRKGTCNVWDLQTANQVGALKAAHRGPVSCMMRWSASNI----VTGGQDGTVKVFDTRR--GIPLVAHKVNCHIDPTQGTTGAVSCLEKAGGLLATGGGDNRVCLLDPRMNFKALHVFRNHHAPVFSLKYTLASESPVLFTGAGDGVLHCVNLLSRQELYSLQPTQGAVRAIASTTHLEENKKLVVACEDGKAVIFTF 488
            P++ AG   DASDR LLCM +     + VVGSADH L  + + + K  + LYTK +GH +WV+C  +   +G+I+SGG D K+C W A   +  T                         DL GH  ++S +     SQ+A SS YD  ++LW          D  +A R I              PVM F +     QL+SG R+GT  VWD++  + + A  A  RG +S +    +S++      G Q G + V D  R    P+ +  ++    P    TG  S  E +   L T G D  + +LDPR  FK LH F +H   ++SL+    +  P++ +G  +G L   +++     Y L     AVR I         + LV A +DGKA+++ F
Sbjct:  123 PIDSAGRCFDASDRNLLCMDVHAASKQCVVGSADHGLKVFDITSGKEKKNLYTKKYGHTEWVTCCKYFQSNGKIISGGMDSKLCLWEATGPARCT-------------------------DLMGHTGSISHVEVNCASQLALSSSYDRTLRLW----------DCAAAGRCIATFAGHKA------PVMMFSW--CGAQLLSGDRQGTAKVWDIERGSCL-ATMATKRGQISSLWHLLSSDVGLLSAIGDQGGVLCVMDFLRTGSKPIFSDALH----PGGAITGIRSVDESS--YLITAGADKVILVLDPRAGFKTLHRFTDHRDFIYSLE----TFGPLVLSGGANGWLLVHDVIEGNCCYGLGANTAAVRCIHPM-----REHLVAAGDDGKAMVYDF 464          
BLAST of NO06G03260 vs. NCBI_GenBank
Match: OQR97707.1 (hypothetical protein THRCLA_06877 [Thraustotheca clavata])

HSP 1 Score: 170.2 bits (430), Expect = 1.500e-38
Identity = 125/403 (31.02%), Postives = 187/403 (46.40%), Query Frame = 0
Query:   94 PLNPAGDMCDASDRPLLCMSLSKDETEFVVGSADHALYAYSLKTCKPT-RKLYTKAHGHIDWVSCVAHMDDGRILSGGGDGKVCWWPAARSSSFTMRGGGSMAGLSGQSATSGNSLTVSEDLDGHASAVSKILPVPNSQMAFSSGYDGLIKLWNMKSKRTLTFDAGSASRGIIMTGDSPGSGNALDPVMDFCFDEDKEQLISGTRKGTCNVWDLQTANQVGALKAAHRGPVSCMM--RWSASNIVTGGQDGTVKVFDTR---RGIPLVAHKVNCHIDPTQGTTGAVSCLEKA---GGLLATGGGDNRVCLLDPRMNFKALHVFRNHHAPVFSLKYTLASESPVLFTGAGDGVLHCVNLLSRQELYSLQPTQGAVRAIASTTHLEENKKLVVACEDGKAVIFTF 488
            PL+PAG     S++PL CMS++ D +  VVGS DHALY   LK  K   R LYTK  GH +W++ V H+ DGRI+S G D K+C W                            S+   EDL GHA ++S +  + N +   SS YD   +LW+    R    +  +      ++G          P++DF       +L+ G R G+  V+DLQ        KA H G  +  +  ++  +   TGGQDG +K +D R     + LV H         +   GAVS +++       + TGG D +V ++D R        F +H   ++SL  T        F+G+GDG+L   +L   +  Y L   Q AVRAI +T     + KL+ A +DG  +++ +
Sbjct:  315 PLDPAGRAFAVSNQPLTCMSMALDCSHVVVGSCDHALYTIPLKDAKARGRTLYTKTCGHKEWITSVGHLSDGRIVSAGMDSKLCLW-------------------------DNGSIVRCEDLVGHAGSISLVQTIGN-EWIISSSYDKTYRLWDAAPGRR---NGKNGRERHCLSGHDA-------PILDFSIWGSTPRLVGGDRNGSVLVFDLQQYVSEKKWKATHSGHCTSALGSQFDDNIAFTGGQDGILKKWDLRTKQNSLELVIHS-------NKTGKGAVSFIKEQPLNEFTILTGGADGQVQVIDLRQGCIRTS-FTSHRTFIYSLHVT----KDYCFSGSGDGMLLVHDLTQDKLCYGLGANQAAVRAICTT-----DNKLIAAGDDGGVIVYDY 664          
The following BLAST results are available for this feature:
BLAST of NO06G03260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26320.14.300e-15860.92WD40 repeat containing protein [Nannochloropsis ga... [more]
GAY03697.11.100e-4731.33Hypothetical protein PINS_011503 [Pythium insidios... [more]
PNR31762.12.200e-4530.66hypothetical protein PHYPA_025885 [Physcomitrella ... [more]
XP_024359160.11.100e-4431.46uncharacterized protein LOC112274153 [Physcomitrel... [more]
GAQ85255.19.600e-4131.57F-box and WD-40 domain protein 7 [Klebsormidium ni... [more]
CCI44661.16.200e-4029.06unnamed protein product [Albugo candida][more]
CCI44662.16.200e-4029.06unnamed protein product [Albugo candida][more]
CCA16936.19.000e-3930.81conserved hypothetical protein [Albugo laibachii N... [more]
CCC48444.11.500e-3831.17conserved hypothetical protein [Trypanosoma vivax ... [more]
OQR97707.11.500e-3831.02hypothetical protein THRCLA_06877 [Thraustotheca c... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR029ncniR029Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000150NSK000150Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G03260.1NO06G03260.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597600gene_6647Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100078g4gene4208Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G03260.1NO06G03260.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G03260 ID=NO06G03260|Name=NO06G03260|organism=Nannochloropsis oceanica|type=gene|length=2025bp
AACACAGCCGCATGTATCAGTACCCTGCTGCCCGGAATGATTTGAAACGT
GACCATGGCCAGATCCAGGGCCAGGGCCAGGGTCCAGGCAAGCCCCCATC
ATCATTTCGTACCCCTTCGCCCACTCCTCCCCGCCGCACGGTCGTCTGTG
CCCACGCCACCCTGCCATGCGTCCGTAGTCAGGCCTCGGGTGCAGCGCCG
CCCCGAAAATCCCGCGTTACACCTCCAGATATGTCATTCTCGGCCCGAAG
CCACCGTGCCGGCGTGGCGCACCGCGGCTTTGTTTATCCTCCCTTGAATC
CGGCAGGAGATATGTGCGATGCGAGTGATCGTCCTTTGCTTTGCATGAGC
TTGTCCAAGGACGAGACAGAGTTCGTAGTGGGGAGCGCAGACCATGCGTT
ATATGCGTATAGCCTGAAAACCTGTAAGCCTACCCGAAAATTATACACCA
AGGCGCACGGACACATTGATTGGGTCTCGTGCGTGGCACACATGGACGAC
GGTCGAATTCTATCGGGAGGCGGGGACGGCAAGGTCTGCTGGTGGCCTGC
AGCGCGATCTTCATCGTTTACAATGCGGGGAGGAGGTTCCATGGCAGGGT
TAAGTGGCCAGTCTGCTACTTCCGGCAACAGCTTGACGGTGTCTGAGGAC
CTGGACGGGCACGCGAGCGCAGTCAGCAAGATATTGCCTGTGCCCAACTC
ACAAATGGCGTTCAGCAGTGGCTACGATGGGCTGATCAAGCTCTGGAATA
TGAAATCGAAGCGAACCCTTACTTTTGATGCGGGAAGTGCGAGCCGAGGC
ATTATCATGACCGGCGACAGCCCCGGTAGTGGGAATGCTCTGGACCCCGT
GATGGACTTTTGCTTTGACGAGGACAAAGAGCAGCTCATAAGTGGAACAC
GCAAAGGCACGTGCAATGTCTGGGATTTACAGACGGCCAATCAAGTGGGT
GCGCTTAAGGCGGCACATCGCGGGCCCGTGTCGTGCATGATGCGATGGTC
GGCCTCGAATATCGTTACAGGGGGCCAAGACGGCACTGTGAAGGTCTTTG
ATACCCGACGGGGCATACCTCTCGTTGCACACAAGGTAAACTGCCACATC
GATCCTACGCAGGGCACAACGGGTGCAGTATCGTGCTTGGAAAAGGCAGG
TGGACTGTTGGCGACTGGCGGGGGGGATAATAGGGTTTGTCTGTTGGATC
CGCGCATGAATTTCAAAGCGCTCCATGTCTTCAGAAATCATCATGCCCCA
GTGTTCAGCTTGAAGTATACACTGGCGTCCGAAAGTCCAGTTTTGTTTAC
TGGAGCGGGGGACGGGGTGCTGCATTGTGTGAACTTGTTATCGCGCCAGG
AACTGTATAGTTTGCAACCAACTCAGGGGGCTGTTCGTGCGATTGCCTCG
ACAACGCACTTAGAGGAGAATAAGAAGCTTGTCGTGGCATGTGAGGATGG
TAAGGCTGTAATTTTTACGTTCTAAATACGTTTTGCTCTAGCGCTTAGGT
CAAAGGAAAGCCGTAGAGCGCGCGTCAAAAGCACAGCGAGAACGGACTAT
ACAGAAAGTTATGTAAGTTTTTTGCTCTTTTTATTTTTTGGGGGTTTTAA
AGACCATAACGAGCCTTGTCACCGGCATAAACATATCTCCTTCTATCATA
TTTTGAGCACCAAAATAAGCCCGCCCCGCAAGACGGGGAAGCTGCCGGCA
TCAGGCCACTGGCGTTTTCGCGGGACGATGACGCCATCCCGCTCTAAACA
AGCCGCTCCTTTGGCTGCCGGTCATCCTGCGCCGACGAGTGGGACTGATG
TGGAAGAGAAGTCTGCCCTCGAAGGACGACCTGAATATGGTAGGTAACGC
TAGAGAGTTTGCGGAGGAAAACGCAGCATTACACGCATGGATGTATATAC
ACACTGCCGATATGTGATTCACACATATTTACGGACACAGTCAAATCGTA
AGTCAGCACAAAACATTTTGCTTGAACATTAAAACATAACTGCATGTAGA
TACATCGAAAGAAATAAGCTAAGTG
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protein sequence of NO06G03260.1

>NO06G03260.1-protein ID=NO06G03260.1-protein|Name=NO06G03260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=488bp
MYQYPAARNDLKRDHGQIQGQGQGPGKPPSSFRTPSPTPPRRTVVCAHAT
LPCVRSQASGAAPPRKSRVTPPDMSFSARSHRAGVAHRGFVYPPLNPAGD
MCDASDRPLLCMSLSKDETEFVVGSADHALYAYSLKTCKPTRKLYTKAHG
HIDWVSCVAHMDDGRILSGGGDGKVCWWPAARSSSFTMRGGGSMAGLSGQ
SATSGNSLTVSEDLDGHASAVSKILPVPNSQMAFSSGYDGLIKLWNMKSK
RTLTFDAGSASRGIIMTGDSPGSGNALDPVMDFCFDEDKEQLISGTRKGT
CNVWDLQTANQVGALKAAHRGPVSCMMRWSASNIVTGGQDGTVKVFDTRR
GIPLVAHKVNCHIDPTQGTTGAVSCLEKAGGLLATGGGDNRVCLLDPRMN
FKALHVFRNHHAPVFSLKYTLASESPVLFTGAGDGVLHCVNLLSRQELYS
LQPTQGAVRAIASTTHLEENKKLVVACEDGKAVIFTF*
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Synonyms
Publications