NO06G02820, NO06G02820 (gene) Nannochloropsis oceanica

Overview
NameNO06G02820
Unique NameNO06G02820
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2131
Alignment locationchr6:810155..812285 -

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Properties
Property NameValue
DescriptionVacuolar sorting protein 9 domain-containing protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:810155..812285 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR037191VPS9_dom_sf
IPR003123VPS9
Homology
BLAST of NO06G02820 vs. NCBI_GenBank
Match: EWM26311.1 (vacuolar sorting protein 9 domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 508.1 bits (1307), Expect = 4.200e-140
Identity = 318/660 (48.18%), Postives = 402/660 (60.91%), Query Frame = 0
Query:   13 ARRRALLLEARKQREAWIQDEDYKEVGVVQAXXXXXXXXXXXXXXXXXXXXXRGTLTGLFEGIPGLEGVMPIAREYVGFLNELAGEGDREAIEL---VSDASSAAEXXXXXXXXXXXXXEEAPPLPDIALNASVSLSYDDFVQLLAHPGSIEVVKSMQRFVTAFIQSQERREGLSALPPSSLSTPRPQGQHLHAFIESLRLEMCKSGVWAARLAIEEKRXXXXXXXXXXXXXXXAWDGLREHLEKFLVIKLYRYLFTEAETQTLRDQEAAWQARLDSLAFLGPEHLEVRSLISSLPSISISTSLAPAIAEFSLVPSYKAPVDIMSCLLRCSYLLSRGLVAAHPPGTGLPGADEFLPAMILMIKESKPSGLRKALDIVQCYRYPPRLQVSEPAYVFTNVLSAVHFLETAKAGQLNMTPEVFERSLVAC---SRSMGRWREGVFETRAGXXXXXXXXXXXXXXXXHGVGVLPVLSALKDMTLKEGTSLSSSSFLSSSLVVGNGHYKSSEPHGSV-----LLPARSIQDIRRERMAGAAAARVVTVPSTAAVSPSNSTRSFTSLRLHDLLGRIQDTHRNXXXXXXXXXXXXXXXXXXCTQGKHQEGAIGQPHLLQSLSSEQLKKACSFLTVPPQDLRVSDMSALLSEYRCLAIVAGECLNLLQ 662
            +RR  LLLEAR+QR +W+Q+EDY E+ +V+A                     +G+L GLF+ +PGL  V+P AREYVGFLNE+AGE D++A+     V  A SA +             E A PLPD +L+ S  LSYD F++LL HPGS E+VKSMQRFV+AFIQSQERR GL A  P S S+PRPQG+HLHAFI+SLR E+C + VW+ RL                     AW+ +REHLEKFLVIKL+RYLFTEAETQ L  +EA W+AR+ SLAFLGPEHLEVRSL+S   S S+S +LAPAI EFS VP++KAP DIM+ LLRCS  L++ LV++   GTGLPGADEFLPAMIL +KES P  LR A+  VQ YR+P RLQV+EPAYVFTNVLSA+HFLETA A QLNMTPE F  S+ AC   SRS+ R +E  F    G                   G L   S L++++   G     S+F   ++  G     SS   GS+       P RSIQ+++RER  G   A     P+ AA++P  +     + RL +L+  +Q+ H +                   +QG   +    Q  L  SLSS++L K+CSFL     DLR+SD+SALL+EYRCL  VA +CL LLQ
Sbjct:    9 SRRHDLLLEARRQRSSWLQNEDYVEMDIVEA------LLAKQQKEQQQHGKEQGSLAGLFQKVPGLANVLPAAREYVGFLNEVAGEDDQDAVAYDPKVLQALSAVQ-DSETRSLEEAEAEPATPLPDESLDPSTPLSYDGFIRLLMHPGSAEIVKSMQRFVSAFIQSQERRRGLPARAPPSPSSPRPQGEHLHAFIDSLRGELCNNKVWSGRLT-------AGGGSRASGSWSAAWEEVREHLEKFLVIKLHRYLFTEAETQVLVKEEARWRARVQSLAFLGPEHLEVRSLLS---SSSVSAALAPAILEFSRVPAHKAPADIMAGLLRCSQALTQALVSSRVAGTGLPGADEFLPAMILTVKESNPENLRWAIHAVQRYRHPSRLQVAEPAYVFTNVLSAIHFLETADASQLNMTPESFATSVAACKAASRSLSRTQERGFMAEIGDGEDRPLVDLPGPASAPLSGALS--SPLQNLSTARGPVAPPSTF---AMATGRAGPLSSPLSGSLGKKASPWPFRSIQNVQRERELGTRGA-----PTLAAMTPP-APLQVAACRLQELVKDLQE-HASRRLEKDR------------SQGSRSQEIQQQTPLPPSLSSQRLLKSCSFLHASSLDLRLSDISALLAEYRCLVAVADQCLELLQ 627          
BLAST of NO06G02820 vs. NCBI_GenBank
Match: CBN79664.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 125.9 bits (315), Expect = 4.500e-25
Identity = 121/467 (25.91%), Postives = 192/467 (41.11%), Query Frame = 0
Query:   14 RRRALLLEARKQREAWIQDEDYKEVGVVQAXXXXXXXXXXXXXXXXXXXXXRGTLTGLFEGIPGLEGVMPIAREYVGFLNELAGEGDREAIELVSDASSAAEXXXXXXXXXXXXXEEAPPLPDIALNASVSLSYDDFVQLLAHPGSIEVVKSMQRFVTAFIQSQERREGLSALPPSSLST---------------------PRPQGQH-------------------------LHAFIESLRLEMCKSGVWAARLAIEEKRXXXXXXXXXXXXXXXAWDGLREHLEKFLVIKLYRYLFTEAETQTLRDQEAAWQARLDSLAFLGPEHLEVRSLISSLPSISISTSLAPAIAEFSLVPSYKAPVDIMSCLLRCSYLLSRGLVAAHPPGTGLPGADEFLPAMILMIKESKPSGLRKALDIVQCYRYPPRLQVSEPAYVFTNVLSAVHFLETAKAGQLNMTPEVFERSLV 435
            RR  LL EAR++R AW+++    + GV  A                             EG   LE + P A ++  FL  LAG+ D       S A   +              ++ P    I      S+ +D F+  L HP + EVVKS+Q+FV AF    E    L++  P   +                        P G                           +HAF+  +  +M +S +W      +                   W+  RE LE+ ++ K++   +  A       ++++   RL SL FL  EHL V  L+ +    ++  + A A A+   +   + P D++ C+++C+ +++  L      G  LPGAD+FLPA+IL++K + P GL   L+ VQ +R P +L +SE  YV T ++SAV FLE   A  L++    FER L+
Sbjct:   27 RRTELLAEARRKRVAWVEEARGIDDGVDGARKRREDEAAASGRKA--------------EG--ELERLFPSAVKFHDFLTGLAGDRDE------SPAGDMSAILQPFMIEDVDIGDDRP----IPAYREGSVPFDVFLDKLRHPRAAEVVKSLQQFVAAFRARVEAPPALASPGPRGATAGSSNAFVGVPVPAVRNGREADTSPNGSXXXXXXXXXXXXXXXXXXXXVTMSGMMHAFLGRVEAQMRESALWRRETEAQ-------------------WEDTRESLERIVMHKVFDQAYGLAADP---GRDSSISTRLRSLGFLTEEHLGVPPLVDAQEDGAL--TWADAEAQLLKMSRMRCPGDMLRCIVKCTRIVAGLLTGDRAAGGALPGADDFLPALILLVKRANPPGLHSTLEFVQSFRDPSKL-LSEAGYVLTQLVSAVCFLEEVDASVLSIAHGDFERGLI 442          
BLAST of NO06G02820 vs. NCBI_GenBank
Match: XP_004347671.2 (hypothetical protein CAOG_04920 [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 115.9 bits (289), Expect = 4.700e-22
Identity = 81/290 (27.93%), Postives = 135/290 (46.55%), Query Frame = 0
Query:  144 SLSYDDFVQLLAHPGSIEVVKSMQRFVTAFIQSQERREGLSALPPSSLSTPRPQGQHLHAFIESLRLEMCKSGVWAARLAIEEKRXXXXXXXXXXXXXXXAWDGLREHLEKFLVIKLYRYLFTEAETQTLRDQEAAWQARLDSLAFLGPEHLEVRSLISSLPSISISTSLAPAIAEFSLVPSYKAPVDIMSCLLRCSYLLSRGLVAAHPPGTGLPGADEFLPAMILMIKESKPSGLRKALDIVQCYRYPPRLQVSEPAYVFTNVLSAVHFLETAKAGQLNMTPEVFERSL 434
            S ++ DF++ +  P S E+VKS++ F+T+F++     +               Q + +  F+++   ++    +W                         A D   E LEK+L+ KLY   F+   +  +   E     R+  L+FL P HL+++      P      +L P +AE   + SYKAP D + C+L C   +   L  A        GADEFLP +I ++  + P  L   L  +Q +R+P +L  SEP Y FTN++SAV F++   + QL++ P VF+  +
Sbjct:  116 SFNFPDFLEKMKQPSSYELVKSIKVFITSFLERPYNAD--------------EQTEMVQLFMQNTARKLVVHPLWKG-------------------ASPEALDNAIEGLEKYLMHKLYAAAFSNPTSSDVYLDECL-DIRIRRLSFLTPAHLDIK------PGRITDANLGPMMAELQRMNSYKAPRDKLICILNCCKTIYNVLQNAEGAAA---GADEFLPILIYVVLRANPVKLHSDLQYIQRFRHPDKL-TSEPMYYFTNLVSAVAFIQQVTSAQLSIDPAVFDAEM 361          
BLAST of NO06G02820 vs. NCBI_GenBank
Match: KJE94251.1 (hypothetical protein CAOG_004920 [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 115.9 bits (289), Expect = 4.700e-22
Identity = 81/290 (27.93%), Postives = 135/290 (46.55%), Query Frame = 0
Query:  144 SLSYDDFVQLLAHPGSIEVVKSMQRFVTAFIQSQERREGLSALPPSSLSTPRPQGQHLHAFIESLRLEMCKSGVWAARLAIEEKRXXXXXXXXXXXXXXXAWDGLREHLEKFLVIKLYRYLFTEAETQTLRDQEAAWQARLDSLAFLGPEHLEVRSLISSLPSISISTSLAPAIAEFSLVPSYKAPVDIMSCLLRCSYLLSRGLVAAHPPGTGLPGADEFLPAMILMIKESKPSGLRKALDIVQCYRYPPRLQVSEPAYVFTNVLSAVHFLETAKAGQLNMTPEVFERSL 434
            S ++ DF++ +  P S E+VKS++ F+T+F++     +               Q + +  F+++   ++    +W                         A D   E LEK+L+ KLY   F+   +  +   E     R+  L+FL P HL+++      P      +L P +AE   + SYKAP D + C+L C   +   L  A        GADEFLP +I ++  + P  L   L  +Q +R+P +L  SEP Y FTN++SAV F++   + QL++ P VF+  +
Sbjct:  134 SFNFPDFLEKMKQPSSYELVKSIKVFITSFLERPYNAD--------------EQTEMVQLFMQNTARKLVVHPLWKG-------------------ASPEALDNAIEGLEKYLMHKLYAAAFSNPTSSDVYLDECL-DIRIRRLSFLTPAHLDIK------PGRITDANLGPMMAELQRMNSYKAPRDKLICILNCCKTIYNVLQNAEGAAA---GADEFLPILIYVVLRANPVKLHSDLQYIQRFRHPDKL-TSEPMYYFTNLVSAVAFIQQVTSAQLSIDPAVFDAEM 379          
BLAST of NO06G02820 vs. NCBI_GenBank
Match: XP_013759470.1 (vacuolar assembly/sorting protein VPS9 [Thecamonas trahens ATCC 50062] >KNC47538.1 vacuolar assembly/sorting protein VPS9 [Thecamonas trahens ATCC 50062])

HSP 1 Score: 110.5 bits (275), Expect = 2.000e-20
Identity = 89/292 (30.48%), Postives = 138/292 (47.26%), Query Frame = 0
Query:  144 SLSYDDFVQLLAHPGSIEVVKSMQRFVTAFIQSQERREGLSALPPSSLSTPRPQGQHLHAFIESLRLEMCKSGVWAARLAIEEKRXXXXXXXXXXXXXXXAWDGLREHLEKFLVIKLYRYLFTEAETQTLRDQEAAWQARLDSLA-FLGPEHLEVRSLISSLPSISISTSLAPAIAEFSLVPSYKAPVDIMSCLLRCSYLLSRGLVAAHPPGTGLP-GADEFLPAMILMIKESKPSGLRKALDIVQCYRYPPRLQVSEPAYVFTNVLSAVHFLETAKAGQLNMTPEVFERSL 434
            SL +  F+  L HP + EV  +++ FV  F     RR    A PP     PR   + + +F+ES    M    +W+     E                   +   RE LEK+++ KLY   F      T  +++AA  A + +LA FL P HL+++      P +   +++  A  E + +  YKAP D + C+L C  ++    + AH  G+  P GADEFLP +I ++  +    +    D +  +R P  L   E  Y FTN++SA+ FLE  K  QLNMT E F+ ++
Sbjct:  265 SLDFQAFLAQLQHPSAFEVFNTVKAFVGNF-----RR----APPP-----PRLMSETVRSFLESTASLMVAHPMWSETSPAE-------------------FANAREGLEKYVMTKLYAKAFRPG-GDTDAERDAALAAHIKALATFLRPHHLDIK------PELCNESAIKLAANELAKMSHYKAPRDKLVCVLNCCKVIFN--ILAH--GSSTPAGADEFLPLLIYVVLRANARAMHSNCDYISRFRSPVALN-GESGYYFTNLVSAITFLENCKPSQLNMTAEEFDAAM 511          
BLAST of NO06G02820 vs. NCBI_GenBank
Match: KVI06894.1 (Vacuolar sorting protein 9 [Cynara cardunculus var. scolymus])

HSP 1 Score: 108.6 bits (270), Expect = 7.500e-20
Identity = 83/316 (26.27%), Postives = 141/316 (44.62%), Query Frame = 0
Query:  136 DIALNASVSLSYDDFVQLLAHPGSIEVVKSMQRFVTAFIQSQERREGLSALPPSSLSTPRPQGQHLHAFIESLRLEMCKSGVWAARLAIEEKRXXXXXXXXXXXXXXXAWDGLREHLEKFLVIKLYRYLFTEAETQTLRDQEAAWQARLDSLAFLGPEHLEVRSLISSLPSISISTSLAPAIAEFSLVPSYKAPVDIMSCLLRCSYLLSRGLV-AAHPPGTGLPGADEFLPAMILMIKESKPSGLRKALDIVQCYRYPPRLQVSEPAYVFTNVLSAVHFLETAKAGQLNMTPEVFERSLVACSRSMGRWREGVFET 451
            + +++++ + ++ DF++ +  P + E VKS++ F+ +F               ++   P      +  F+ ++        +WA R   E                    D   E LEK+++ KL+  +F         D E   ++ L    F+ PEHLE+R +  +       TS   A  E   +  YK+P D ++C+L C  ++S  L+ AA       PGAD+FLP +I +  ++ P  L   L  +Q YR   RL V E AY+FTN+LSA  F+ +  A  L+M    F +++ +     G   E   ET
Sbjct:    5 EASISSTATRTWHDFLERMRQPSATEFVKSIKSFIVSF--------------SNNAPDPERDSASIQEFLGNMEAAFRAHPLWAGRTEEE-------------------LDNAGEGLEKYIMTKLFNRVFASHPDDIKIDNELHQKSALIQ-QFIRPEHLEIRQIYEN------ETSWLLAQKELQKINVYKSPRDKLACILNCCKIISNLLLNAAINANQNPPGADDFLPVLIYITIKANPPQLHSNLSYIQRYRCKSRL-VGESAYIFTNMLSAESFILSINAESLSMNETEFTKNMESAQLISGLSSETQSET 279          
BLAST of NO06G02820 vs. NCBI_GenBank
Match: OAE34432.1 (hypothetical protein AXG93_4875s1520 [Marchantia polymorpha subsp. ruderalis] >PTQ49399.1 hypothetical protein MARPO_0003s0258 [Marchantia polymorpha])

HSP 1 Score: 107.5 bits (267), Expect = 1.700e-19
Identity = 82/301 (27.24%), Postives = 140/301 (46.51%), Query Frame = 0
Query:  136 DIALNASVSLSYDDFVQLLAHPGSIEVVKSMQRFVTAFIQSQERREGLSALPPSSLSTPRPQGQHLHAFIESLRLEMCKSGVWAARLAIEEKRXXXXXXXXXXXXXXXAWDGLREHLEKFLVIKLYRYLFTEAETQTLRDQEAAWQARLDSLAFLGPEHLEVRSLISSLPSISISTSLAPAIAEFSLVPSYKAPVDIMSCLLRCSYLLSRGLV-AAHPPGTGLPGADEFLPAMILMIKESKPSGLRKALDIVQCYRYPPRLQVSEPAYVFTNVLSAVHFLETAKAGQLNMTPEVFERSLVA 436
            DI  N++  L+  DF+  + HP + ++V+S++ F+  F+ +          PP     P    Q +  F+ S      +  +WA   A EE+                 ++   E LEK+L+ KL+   F+        DQ  + +  +    F+ PEHL++        +    TS   A  E   + +YKAP D + C+L C  +++  LV  +       PGAD+FLP +I ++ ++ P  L   L  +  YR+  RL VSE +Y +TN++SA  F++   +  L+M P  FE+ + A
Sbjct:    5 DIFNNSTAQLTVHDFLDRMRHPSAADLVRSIKTFIGEFLNN----------PPD----PEKDSQSVQGFLASTESVFREHPLWAT--ATEEE-----------------FESSGEGLEKYLMTKLWPRAFSPVPEDAEIDQRLSEKMTI-LQEFIRPEHLDIPK------NSQNETSWLLAQKELRKINTYKAPRDKLVCILNCCRIINNLLVNVSMASNDNPPGADDFLPVLIYVVIKANPPQLHSNLQYILRYRHQGRL-VSEASYFYTNLVSAESFIQNLDSSSLSMNPAEFEKRMQA 264          
BLAST of NO06G02820 vs. NCBI_GenBank
Match: XP_022746983.1 (vacuolar protein sorting-associated protein 9A-like [Durio zibethinus])

HSP 1 Score: 106.7 bits (265), Expect = 2.900e-19
Identity = 85/297 (28.62%), Postives = 132/297 (44.44%), Query Frame = 0
Query:  140 NASVSLSYDDFVQLLAHPGSIEVVKSMQRFVTAFIQSQERREGLSALPPSSLSTPRPQ--GQHLHAFIESLRLEMCKSGVWAARLAIEEKRXXXXXXXXXXXXXXXAWDGLREHLEKFLVIKLYRYLFTEAETQTLRDQEAAWQARLDSLAFLGPEHLEVRSLISSLPSISISTSLAPAIAEFSLVPSYKAPVDIMSCLLRCSYLLSRGLV-AAHPPGTGLPGADEFLPAMILMIKESKPSGLRKALDIVQCYRYPPRLQVSEPAYVFTNVLSAVHFLETAKAGQLNMTPEVFERSL 434
            NA + L   DF++ +  P + E VKS++ F+ +F                S+  P P+       AF            +WA     EE+                  D   E LEK+++ KL+  +F         D++ + +  L    F+ PE+L+++      P+    TS   A  E   +  YKAP D + C+L C  +++  L+ A+       PGADEFLP +I +  ++ P  L   L  +QCYR   RL VSE AY FTN+LSA  F+    A  L+M    FE+++
Sbjct:    3 NADIFLGLQDFLERMRQPSAAEFVKSIKSFIVSF----------------SIHAPEPERDSTAAQAFFAKTEAAFRAHPLWAG--CSEEE-----------------LDSAGEGLEKYVMTKLFTRVFASLPDDVKHDEQLSEKMAL-LQQFVQPENLDIK------PTFQNETSWLLAQKELQKINMYKAPRDKLVCILNCCKVINNLLLNASIASNENPPGADEFLPVLIYVTIKANPPHLHSNLLYIQCYRRQSRL-VSEAAYFFTNMLSAESFISNIDAKALSMEETEFEKNM 256          
BLAST of NO06G02820 vs. NCBI_GenBank
Match: XP_020524304.1 (vacuolar protein sorting-associated protein 9A isoform X1 [Amborella trichopoda])

HSP 1 Score: 105.9 bits (263), Expect = 4.900e-19
Identity = 85/301 (28.24%), Postives = 138/301 (45.85%), Query Frame = 0
Query:  136 DIALNASVSLSYDDFVQLLAHPGSIEVVKSMQRFVTAFIQSQERREGLSALPPSSLSTPRP--QGQHLHAFIESLRLEMCKSGVWAARLAIEEKRXXXXXXXXXXXXXXXAWDGLREHLEKFLVIKLYRYLFTEAETQTLRDQEAAWQARLDSLAFLGPEHLEVRSLISSLPSISISTSLAPAIAEFSLVPSYKAPVDIMSCLLRCSYLLSRGLV-AAHPPGTGLPGADEFLPAMILMIKESKPSGLRKALDIVQCYRYPPRLQVSEPAYVFTNVLSAVHFLETAKAGQLNMTPEVFERSL 434
            D    A+  L+  DF+  + HP + ++VKS++ F+ +F+                 +TP P      +  F+ ++        +WA   A EE+                    L E LEK+++ KL+   F     +  +D+E + +  L    F+ P++L+++      P+    TS   A  E   +  YKAP D + C+L C  +++  L+ A+       PGADEFLP +I +  ++ P  L   L  +Q YR   RL VSE AY FTN+LSA  F+    AG L+M    FE ++
Sbjct:    5 DFLSAATAPLTCHDFLDRMRHPSAADLVKSIKSFIVSFLN----------------NTPDPVKDSVAVQEFLNNMEGAFRAHTLWAG--ASEEELESAGEV------------SLSEGLEKYVMTKLFTRAFASIPEEVKKDEELSEKMALVQ-QFIRPDNLDIK------PNFQNETSWLLAQKELQKINMYKAPRDKLLCILHCCKVINNLLLNASIASNDNPPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRQSRL-VSESAYFFTNLLSAESFIANLDAGSLSMDETEFEMNM 267          
BLAST of NO06G02820 vs. NCBI_GenBank
Match: XP_022009646.1 (vacuolar protein sorting-associated protein 9A-like [Helianthus annuus] >OTF97999.1 putative VPS9 domain-containing protein [Helianthus annuus])

HSP 1 Score: 105.9 bits (263), Expect = 4.900e-19
Identity = 85/294 (28.91%), Postives = 130/294 (44.22%), Query Frame = 0
Query:  141 ASVSLSYDDFVQLLAHPGSIEVVKSMQRFVTAFIQSQERREGLSALPPSSLSTPRPQGQHLHAFIESLRLEMCKSGVWAARLAIEEKRXXXXXXXXXXXXXXXAWDGLREHLEKFLVIKLYRYLFTEAETQTLRDQEAAWQARLDSLAFLGPEHLEVRSLISSLPSISISTSLAPAIAEFSLVPSYKAPVDIMSCLLRCSYLLSRGLV-AAHPPGTGLPGADEFLPAMILMIKESKPSGLRKALDIVQCYRYPPRLQVSEPAYVFTNVLSAVHFLETAKAGQLNMTPEVFERSL 434
            ++  L++ DF++ + HP + E VKS++ F+ +F          S  PP     P      +  F+ ++        +WA R   E                    D   E LEK+++ KLY  +F         D E   +  L    F+ PEHL+++      P+    TS   A  E   +  YKAP D + C+L C  ++S  L  A+      LPGADEFLP +I +  ++ P  L   L  +Q YR   RL V E AY FTN+LSA  F+       L+M    F++++
Sbjct:   10 STAPLTWHDFLERMRHPSASEFVKSIKTFIVSF----------SNNPPD----PERDSAAVQEFLTNMETAFRAHPLWAGRSEEE-------------------LDSAGEGLEKYIMTKLYTRVFASHPDDVKVDDELYEKLALVQ-QFIRPEHLDIQ------PTYQNETSWLLAQKELQKINLYKAPRDKLVCILSCCKVISNLLFNASTDANESLPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRESRL-VGEAAYFFTNMLSAESFVMNINGESLSMDETEFQKNM 262          
The following BLAST results are available for this feature:
BLAST of NO06G02820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26311.14.200e-14048.18vacuolar sorting protein 9 domain-containing prote... [more]
CBN79664.14.500e-2525.91conserved unknown protein [Ectocarpus siliculosus][more]
XP_004347671.24.700e-2227.93hypothetical protein CAOG_04920 [Capsaspora owczar... [more]
KJE94251.14.700e-2227.93hypothetical protein CAOG_004920 [Capsaspora owcza... [more]
XP_013759470.12.000e-2030.48vacuolar assembly/sorting protein VPS9 [Thecamonas... [more]
KVI06894.17.500e-2026.27Vacuolar sorting protein 9 [Cynara cardunculus var... [more]
OAE34432.11.700e-1927.24hypothetical protein AXG93_4875s1520 [Marchantia p... [more]
XP_022746983.12.900e-1928.62vacuolar protein sorting-associated protein 9A-lik... [more]
XP_020524304.14.900e-1928.24vacuolar protein sorting-associated protein 9A iso... [more]
XP_022009646.14.900e-1928.91vacuolar protein sorting-associated protein 9A-lik... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000172NSK000172Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G02820.1NO06G02820.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|632032gene_6610Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100093g3gene4228Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G02820.1NO06G02820.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G02820 ID=NO06G02820|Name=NO06G02820|organism=Nannochloropsis oceanica|type=gene|length=2131bp
ACAGGCAGGGCTATCGTGATCCAGCCGCCCATGTCGTCAGTCTAGTCAGC
CGCTTTCCCCCTCGAATGATGACGCCTGCCCTTGCCGTCTCTAGGGCCGC
TGCCCGCCGCCGTGCCCTGCTTCTCGAAGCCCGCAAGCAGCGCGAGGCGT
GGATCCAGGATGAAGATTATAAGGAGGTGGGTGTGGTGCAAGCCCTGATG
GAGAAGCAGCAACAACAGCGGCAGCAGCAGGAGCAGCCACCATCACAAAC
GAAGAAGAGGGGCACTCTCACAGGGCTTTTTGAAGGCATTCCAGGCTTAG
AGGGCGTGATGCCCATCGCGCGGGAGTACGTTGGGTTTTTAAACGAGCTC
GCAGGAGAAGGAGACAGGGAAGCGATCGAATTAGTAAGTGATGCCTCGTC
AGCCGCGGAAGGAGACGGAGAGGACGAGGAAGGCGAAGGAGCACAAGGGG
AGGAAGCTCCGCCCTTGCCAGACATAGCTCTCAATGCCTCCGTGTCCTTG
TCGTACGATGATTTCGTACAGCTTTTGGCTCATCCTGGATCAATTGAAGT
GGTGAAATCCATGCAGCGTTTCGTCACTGCCTTTATCCAAAGCCAAGAGC
GACGCGAGGGGTTGTCCGCTCTCCCTCCCTCCTCCCTCTCCACCCCTCGT
CCGCAAGGACAGCATCTGCACGCATTTATCGAAAGTTTGCGATTAGAAAT
GTGCAAGAGTGGGGTGTGGGCGGCACGGCTGGCAATCGAGGAGAAACGCT
CCTCTCCAGGCTCCTCCTCCTCCTTTTCCTCCTCTTCCTCCTCCGCTTGG
GATGGGTTGAGAGAGCACCTCGAAAAGTTCCTCGTTATCAAACTTTACCG
CTACCTTTTCACCGAAGCTGAAACCCAGACCCTTAGAGATCAAGAAGCCG
CCTGGCAAGCCCGCCTTGACTCCCTCGCCTTCCTCGGCCCCGAGCACCTC
GAAGTCCGCTCCCTCATCTCCTCCTTGCCCTCCATATCCATCTCCACCTC
TCTAGCTCCCGCCATCGCCGAATTCAGCCTTGTCCCCTCTTACAAAGCCC
CCGTGGATATAATGTCTTGCCTTTTACGTTGCTCTTATCTTCTCTCTCGC
GGGCTCGTTGCAGCTCACCCTCCCGGAACCGGCCTACCAGGTGCGGATGA
ATTCCTGCCTGCCATGATTTTAATGATCAAAGAGAGTAAACCTTCCGGCT
TGAGGAAAGCATTGGACATAGTGCAGTGTTACCGCTATCCGCCGCGATTG
CAGGTGTCCGAGCCGGCGTATGTCTTTACGAATGTGCTATCTGCCGTCCA
TTTCCTGGAGACAGCGAAGGCGGGTCAGTTGAATATGACGCCTGAGGTGT
TCGAAAGATCCTTGGTAGCGTGTAGCAGGAGTATGGGAAGATGGAGGGAG
GGTGTGTTCGAAACAAGAGCAGGAGCAGGAGGAGGAGGAGGAGGGGTGGT
AACGGGGGAAGAGGAGGAGGGACATGGGGTGGGAGTGTTGCCTGTTTTGT
CTGCACTTAAGGACATGACGCTTAAAGAGGGTACCTCGCTGTCTTCCTCT
TCCTTCTTGTCTTCCTCCCTCGTTGTCGGTAACGGTCATTACAAGAGCAG
CGAACCCCATGGGTCAGTTTTGCTGCCAGCACGCAGTATTCAAGACATAA
GACGAGAACGGATGGCTGGGGCAGCTGCAGCAAGAGTTGTAACTGTGCCA
AGCACAGCAGCTGTCTCTCCCTCCAATTCTACTCGATCTTTTACTTCCTT
GCGTCTCCACGACTTGCTTGGTCGCATTCAAGACACACATAGGAATCGCA
GCAGTAGTAGCAACAAAAGCAGCAGCAACAGCAACAGCAGCAGCAGCAGA
TGCACGCAGGGCAAGCACCAAGAAGGAGCAATAGGACAACCCCACCTCCT
CCAATCCCTCTCCTCCGAGCAGCTTAAGAAGGCCTGCTCCTTTCTAACTG
TCCCTCCGCAGGACTTGCGGGTAAGCGATATGTCGGCCCTGCTATCAGAG
TATAGATGCCTCGCCATAGTTGCTGGCGAATGTCTTAATTTGCTGCAAGA
GCAAAGAAGGTAGGTTGATTTAAACGTAATCTTTAGGTAATGAAAAAGTG
AGAAACGATAAAGTAAAAAAAGCACACGAGA
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protein sequence of NO06G02820.1

>NO06G02820.1-protein ID=NO06G02820.1-protein|Name=NO06G02820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=666bp
MMTPALAVSRAAARRRALLLEARKQREAWIQDEDYKEVGVVQALMEKQQQ
QRQQQEQPPSQTKKRGTLTGLFEGIPGLEGVMPIAREYVGFLNELAGEGD
REAIELVSDASSAAEGDGEDEEGEGAQGEEAPPLPDIALNASVSLSYDDF
VQLLAHPGSIEVVKSMQRFVTAFIQSQERREGLSALPPSSLSTPRPQGQH
LHAFIESLRLEMCKSGVWAARLAIEEKRSSPGSSSSFSSSSSSAWDGLRE
HLEKFLVIKLYRYLFTEAETQTLRDQEAAWQARLDSLAFLGPEHLEVRSL
ISSLPSISISTSLAPAIAEFSLVPSYKAPVDIMSCLLRCSYLLSRGLVAA
HPPGTGLPGADEFLPAMILMIKESKPSGLRKALDIVQCYRYPPRLQVSEP
AYVFTNVLSAVHFLETAKAGQLNMTPEVFERSLVACSRSMGRWREGVFET
RAGAGGGGGGVVTGEEEEGHGVGVLPVLSALKDMTLKEGTSLSSSSFLSS
SLVVGNGHYKSSEPHGSVLLPARSIQDIRRERMAGAAAARVVTVPSTAAV
SPSNSTRSFTSLRLHDLLGRIQDTHRNRSSSSNKSSSNSNSSSSRCTQGK
HQEGAIGQPHLLQSLSSEQLKKACSFLTVPPQDLRVSDMSALLSEYRCLA
IVAGECLNLLQEQRR*
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Synonyms
Publications