NO06G02700, NO06G02700 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO06G02700
Unique Name	NO06G02700
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	1664
Alignment location	chr6:761848..763511 -

Link to JBrowse

Properties


Property Name	Value
Description	Tubby-related protein 2

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr6	genome	chr6:761848..763511 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025659	Tubby_C-like
IPR000007	Tubby_C

Homology

[Close]

BLAST of NO06G02700 vs. NCBI_GenBank
Match: XP_002906981.1 (tubby-like protein [Phytophthora infestans T30-4] >EEY66382.1 tubby-like protein [Phytophthora infestans T30-4])

HSP 1 Score: 290.0 bits (741), Expect = 1.400e-74
Identity = 148/271 (54.61%), Postives = 185/271 (68.27%), Query Frame = 0

Query:  254 DVRRFVTHPIPRTAGVVHCYIKRRKAGTGKLYPEYHLYTRQGSHFLMAAKKQANNKTSNYHVTLNDRDFAKESPD-YLGKLRANFVGTEFQIFDRGSNGSTNSKGVDGAEVLGPNSGPSNASAPREELGVVVYAANVLGARGPRKMQAFLPRVSKVDDRMVVWKSKEDLAEQDAMLERVRRGDTAKFHHFINKPPRWNDQVGAYVLNFMGRVTMASVKNFQLIEPEDHELVVLQFGRVGRHDFTMDVRWPFTPLQALAVALSSFDSKIACD 524
            D+R F   PIP+   VV CYI+R K+G  K++PEY LY ++G  FL+ AKK+  N+TSNY ++L   D  +   D Y+GKLRANF+GTEF I+D GS    N K VD   +       SN +  R+ELG+ +YAANVLG RGPRKM+  +PRV + D   VVW+    L ++D M+ + +  D     + INKPPRWNDQV AYVLNF GRVTMASVKNFQL+ PED E VVLQFGRVG+  FTMD RWP  PLQA A+ LSSFDSK+AC+
Sbjct:  357 DMRAFTLRPIPKAYDVVECYIERNKSGANKMFPEYCLYMKEGDRFLLTAKKRPKNRTSNYLISLQRGDLLRRGSDNYVGKLRANFLGTEFTIYDNGS----NPKDVDQQTI------TSNPAGIRQELGIAMYAANVLGHRGPRKMKVCVPRV-REDGTRVVWR---PLTKEDEMVNKCKEQDHTNLTYLINKPPRWNDQVCAYVLNFNGRVTMASVKNFQLVTPEDQETVVLQFGRVGKDLFTMDFRWPLCPLQAFAITLSSFDSKLACE 613

[Close]

BLAST of NO06G02700 vs. NCBI_GenBank
Match: OWZ23071.1 (Tubby [Phytophthora megakarya])

HSP 1 Score: 289.7 bits (740), Expect = 1.900e-74
Identity = 147/271 (54.24%), Postives = 187/271 (69.00%), Query Frame = 0

Query:  254 DVRRFVTHPIPRTAGVVHCYIKRRKAGTGKLYPEYHLYTRQGSHFLMAAKKQANNKTSNYHVTLNDRDFAKESPD-YLGKLRANFVGTEFQIFDRGSNGSTNSKGVDGAEVLGPNSGPSNASAPREELGVVVYAANVLGARGPRKMQAFLPRVSKVDDRMVVWKSKEDLAEQDAMLERVRRGDTAKFHHFINKPPRWNDQVGAYVLNFMGRVTMASVKNFQLIEPEDHELVVLQFGRVGRHDFTMDVRWPFTPLQALAVALSSFDSKIACD 524
            D+R F+  PIP+   VV CYI+R K+G  K++PEY LY ++G  FL+ AKK+  N+TSNY ++L   D  +   D Y+GKLRANF+GTEF I+D+G+    N K VD   +       SN +  R+ELG+ +YAANVLG RGPRKM+  +PRV + D   VVW+    L ++D M+ + +  D     + INKPPRWNDQV AYVLNF GRVTMASVKNFQL+ PED E VVLQFGRVG+  FTMD RWP  PLQA A+ LSSFDSK+AC+
Sbjct:  364 DMRSFILRPIPKAYDVVECYIERNKSGANKVFPEYCLYMKEGDRFLLTAKKRPKNRTSNYLISLQRGDLLRRGSDNYVGKLRANFLGTEFTIYDQGA----NPKDVDQQTI------TSNPAGIRQELGIAMYAANVLGHRGPRKMKVCVPRV-RDDGTRVVWR---PLTKEDEMVNKCKEQDHTNLTYLINKPPRWNDQVCAYVLNFNGRVTMASVKNFQLVTPEDQETVVLQFGRVGKDLFTMDFRWPLCPLQAFAITLSSFDSKLACE 620

[Close]

BLAST of NO06G02700 vs. NCBI_GenBank
Match: XP_009538599.1 (hypothetical protein PHYSODRAFT_319932 [Phytophthora sojae] >EGZ05738.1 hypothetical protein PHYSODRAFT_319932 [Phytophthora sojae])

HSP 1 Score: 288.9 bits (738), Expect = 3.200e-74
Identity = 147/271 (54.24%), Postives = 185/271 (68.27%), Query Frame = 0

Query:  254 DVRRFVTHPIPRTAGVVHCYIKRRKAGTGKLYPEYHLYTRQGSHFLMAAKKQANNKTSNYHVTLNDRDFAKESPD-YLGKLRANFVGTEFQIFDRGSNGSTNSKGVDGAEVLGPNSGPSNASAPREELGVVVYAANVLGARGPRKMQAFLPRVSKVDDRMVVWKSKEDLAEQDAMLERVRRGDTAKFHHFINKPPRWNDQVGAYVLNFMGRVTMASVKNFQLIEPEDHELVVLQFGRVGRHDFTMDVRWPFTPLQALAVALSSFDSKIACD 524
            D+R F+  PIP+   VV CYI+R K+G  K++PEY LY ++G  FL+ AKK+  N+TSNY ++L   D  +   D Y+GKLRANF+GTEF I+D GS    N K  D   +       SN +  R+ELG+ +YAANVLG RGPRKM+  +PRV + D   VVW+    L ++D M+ + +  D     + INKPPRWNDQV AYVLNF GRVTMASVKNFQL+ PED E VVLQFGRVG+  FTMD RWP  PLQA A+ LSSFDSK+AC+
Sbjct:  371 DMRAFIMRPIPKAYDVVECYIERNKSGANKMFPEYCLYMKEGDRFLLTAKKRPKNRTSNYLISLQRGDLLRRGSDNYVGKLRANFLGTEFTIYDNGS----NPKDADQQTI------TSNPAGIRQELGIAMYAANVLGHRGPRKMKVCVPRV-REDGTRVVWR---PLNKEDEMVNKCKEQDHTNLTYLINKPPRWNDQVCAYVLNFNGRVTMASVKNFQLVTPEDQETVVLQFGRVGKDLFTMDFRWPLCPLQAFAITLSSFDSKLACE 627

[Close]

BLAST of NO06G02700 vs. NCBI_GenBank
Match: ETI38374.1 (hypothetical protein F443_15874 [Phytophthora parasitica P1569] >ETM38389.1 hypothetical protein L914_15288 [Phytophthora parasitica])

HSP 1 Score: 288.5 bits (737), Expect = 4.200e-74
Identity = 147/271 (54.24%), Postives = 184/271 (67.90%), Query Frame = 0

Query:  254 DVRRFVTHPIPRTAGVVHCYIKRRKAGTGKLYPEYHLYTRQGSHFLMAAKKQANNKTSNYHVTLNDRDFAKESPD-YLGKLRANFVGTEFQIFDRGSNGSTNSKGVDGAEVLGPNSGPSNASAPREELGVVVYAANVLGARGPRKMQAFLPRVSKVDDRMVVWKSKEDLAEQDAMLERVRRGDTAKFHHFINKPPRWNDQVGAYVLNFMGRVTMASVKNFQLIEPEDHELVVLQFGRVGRHDFTMDVRWPFTPLQALAVALSSFDSKIACD 524
            D+R F   PIP+   VV CYI+R K+G  K++PEY LY ++G  FL+ AKK+  N+TSNY ++L   D  +   D Y+GKLRANF+GTEF I+D GS    N K  D   +       SN +  R+ELG+ +YAANVLG RGPRKM+  +PRV + D   VVW+    L ++D M+ + +  D     + INKPPRWNDQV AYVLNF GRVTMASVKNFQL+ PED E VVLQFGRVG+  FTMD RWP  PLQA A+ LSSFDSK+AC+
Sbjct:  287 DMRAFTMRPIPKAYDVVECYIERNKSGANKMFPEYCLYMKEGDRFLLTAKKRPKNRTSNYLISLQRGDLLRRGSDNYVGKLRANFLGTEFTIYDNGS----NPKDADQQTI------TSNPAGIRQELGIAMYAANVLGHRGPRKMKVCVPRV-REDGTRVVWR---PLTKEDEMVNKCKEQDHTNLTYLINKPPRWNDQVCAYVLNFNGRVTMASVKNFQLVTPEDQETVVLQFGRVGKDLFTMDFRWPLCPLQAFAITLSSFDSKLACE 543

[Close]

BLAST of NO06G02700 vs. NCBI_GenBank
Match: XP_008895473.1 (hypothetical protein PPTG_04886 [Phytophthora parasitica INRA-310] >ETK78566.1 hypothetical protein L915_15430 [Phytophthora parasitica] >ETL31996.1 hypothetical protein L916_15325 [Phytophthora parasitica] >ETL85224.1 hypothetical protein L917_15149 [Phytophthora parasitica] >ETN19648.1 hypothetical protein PPTG_04886 [Phytophthora parasitica INRA-310] >ETO67143.1 hypothetical protein F444_15855 [Phytophthora parasitica P1976] >ETP08254.1 hypothetical protein F441_15707 [Phytophthora parasitica CJ01A1] >ETP36307.1 hypothetical protein F442_15715 [Phytophthora parasitica P10297])

HSP 1 Score: 288.5 bits (737), Expect = 4.200e-74
Identity = 147/271 (54.24%), Postives = 184/271 (67.90%), Query Frame = 0

Query:  254 DVRRFVTHPIPRTAGVVHCYIKRRKAGTGKLYPEYHLYTRQGSHFLMAAKKQANNKTSNYHVTLNDRDFAKESPD-YLGKLRANFVGTEFQIFDRGSNGSTNSKGVDGAEVLGPNSGPSNASAPREELGVVVYAANVLGARGPRKMQAFLPRVSKVDDRMVVWKSKEDLAEQDAMLERVRRGDTAKFHHFINKPPRWNDQVGAYVLNFMGRVTMASVKNFQLIEPEDHELVVLQFGRVGRHDFTMDVRWPFTPLQALAVALSSFDSKIACD 524
            D+R F   PIP+   VV CYI+R K+G  K++PEY LY ++G  FL+ AKK+  N+TSNY ++L   D  +   D Y+GKLRANF+GTEF I+D GS    N K  D   +       SN +  R+ELG+ +YAANVLG RGPRKM+  +PRV + D   VVW+    L ++D M+ + +  D     + INKPPRWNDQV AYVLNF GRVTMASVKNFQL+ PED E VVLQFGRVG+  FTMD RWP  PLQA A+ LSSFDSK+AC+
Sbjct:  287 DMRAFTMRPIPKAYDVVECYIERNKSGANKMFPEYCLYMKEGDRFLLTAKKRPKNRTSNYLISLQRGDLLRRGSDNYVGKLRANFLGTEFTIYDNGS----NPKDADQQTI------TSNPAGIRQELGIAMYAANVLGHRGPRKMKVCVPRV-REDGTRVVWR---PLTKEDEMVNKCKEQDHTNLTYLINKPPRWNDQVCAYVLNFNGRVTMASVKNFQLVTPEDQETVVLQFGRVGKDLFTMDFRWPLCPLQAFAITLSSFDSKLACE 543

[Close]

BLAST of NO06G02700 vs. NCBI_GenBank
Match: XP_024573214.1 (Tub family proteins [Plasmopara halstedii] >CEG36845.1 Tub family proteins [Plasmopara halstedii])

HSP 1 Score: 288.5 bits (737), Expect = 4.200e-74
Identity = 148/271 (54.61%), Postives = 185/271 (68.27%), Query Frame = 0

Query:  254 DVRRFVTHPIPRTAGVVHCYIKRRKAGTGKLYPEYHLYTRQGSHFLMAAKKQANNKTSNYHVTLNDRDFAKESPD-YLGKLRANFVGTEFQIFDRGSNGSTNSKGVDGAEVLGPNSGPSNASAPREELGVVVYAANVLGARGPRKMQAFLPRVSKVDDRMVVWKSKEDLAEQDAMLERVRRGDTAKFHHFINKPPRWNDQVGAYVLNFMGRVTMASVKNFQLIEPEDHELVVLQFGRVGRHDFTMDVRWPFTPLQALAVALSSFDSKIACD 524
            ++R F   PIP+   VV CYI+R K+G  K++PEY LY ++G  FL+ AKK+  N+TSNY ++L   D  +   D Y+GKLRANF+GTEF I+D GS    N K  D   V       SN S  R+ELG+ +YAANVLG RGPRKM+  +PRV + D   VVW+    L+++D M+ + +  D     + INKPPRWNDQV AYVLNF GRVTMASVKNFQL+ PED E VVLQFGRVG+  FTMD RWP  PLQA A+ LSSFDSK+AC+
Sbjct:  366 NMRAFTMRPIPKAYDVVECYIERNKSGANKMFPEYCLYMKEGDRFLLTAKKRPKNRTSNYLLSLQRGDLVRRGSDNYVGKLRANFLGTEFTIYDNGS----NPKDADQQTV------TSNPSGIRQELGIAMYAANVLGHRGPRKMKVCVPRV-REDGNRVVWR---PLSKEDEMVNKCKEQDHTNLTYLINKPPRWNDQVCAYVLNFNGRVTMASVKNFQLVTPEDQETVVLQFGRVGKDLFTMDFRWPLCPLQAFAITLSSFDSKLACE 622

[Close]

BLAST of NO06G02700 vs. NCBI_GenBank
Match: KUF94661.1 (Tubby protein [Phytophthora nicotianae])

HSP 1 Score: 288.5 bits (737), Expect = 4.200e-74
Identity = 147/271 (54.24%), Postives = 184/271 (67.90%), Query Frame = 0

Query:  254 DVRRFVTHPIPRTAGVVHCYIKRRKAGTGKLYPEYHLYTRQGSHFLMAAKKQANNKTSNYHVTLNDRDFAKESPD-YLGKLRANFVGTEFQIFDRGSNGSTNSKGVDGAEVLGPNSGPSNASAPREELGVVVYAANVLGARGPRKMQAFLPRVSKVDDRMVVWKSKEDLAEQDAMLERVRRGDTAKFHHFINKPPRWNDQVGAYVLNFMGRVTMASVKNFQLIEPEDHELVVLQFGRVGRHDFTMDVRWPFTPLQALAVALSSFDSKIACD 524
            D+R F   PIP+   VV CYI+R K+G  K++PEY LY ++G  FL+ AKK+  N+TSNY ++L   D  +   D Y+GKLRANF+GTEF I+D GS    N K  D   +       SN +  R+ELG+ +YAANVLG RGPRKM+  +PRV + D   VVW+    L ++D M+ + +  D     + INKPPRWNDQV AYVLNF GRVTMASVKNFQL+ PED E VVLQFGRVG+  FTMD RWP  PLQA A+ LSSFDSK+AC+
Sbjct:  376 DMRAFTMRPIPKAYDVVECYIERNKSGANKMFPEYCLYMKEGDRFLLTAKKRPKNRTSNYLISLQRGDLLRRGSDNYVGKLRANFLGTEFTIYDNGS----NPKDADQQTI------TSNPAGIRQELGIAMYAANVLGHRGPRKMKVCVPRV-REDGTRVVWR---PLTKEDEMVNKCKEQDHTNLTYLINKPPRWNDQVCAYVLNFNGRVTMASVKNFQLVTPEDQETVVLQFGRVGKDLFTMDFRWPLCPLQAFAITLSSFDSKLACE 632

[Close]

BLAST of NO06G02700 vs. NCBI_GenBank
Match: XP_009033946.1 (hypothetical protein AURANDRAFT_20811, partial [Aureococcus anophagefferens] >EGB11595.1 hypothetical protein AURANDRAFT_20811, partial [Aureococcus anophagefferens])

HSP 1 Score: 288.1 bits (736), Expect = 5.400e-74
Identity = 141/270 (52.22%), Postives = 185/270 (68.52%), Query Frame = 0

Query:  254 DVRRFVTHPIPRTAGVVHCYIKRRKAGTGKLYPEYHLYTRQGSHFLMAAKKQANNKTSNYHVTLNDRDFAKESPDYLGKLRANFVGTEFQIFDRGSNGSTNSKGVDGAEVLGPNSGPSNASAPREELGVVVYAANVLGARGPRKMQAFLPRVSKVDDRMVVWKSKEDLAEQDAMLERVRRGDTAKFHHFINKPPRWNDQVGAYVLNFMGRVTMASVKNFQLIEPEDHELVVLQFGRVGRHDFTMDVRWPFTPLQALAVALSSFDSKIACD 524
            D+R F+T P PR AG+V CYIKR ++GT KL+PEY ++ ++G  F+M +KK+ NNKTSNY +++ + D  + S +Y+GKLRANF GTEFQIFD G     N KG +      P+     A   R ELG ++Y +NVLG+RGPRKMQ  +P V +  D     +   D+  +   ++    G      + INKPPRWNDQVGAYVLNF GRVTMASVKNFQL++P+D + ++LQFGRVG+ +FTMD +WP TP QA A+ LSSFDSKIACD
Sbjct:    1 DMRLFLTTPTPRRAGIVQCYIKRNRSGTNKLFPEYSVFMKEGDRFMMCSKKRPNNKTSNYLISMGENDLKRNSHNYIGKLRANFAGTEFQIFDAG----WNPKGFE------PDLEEEGAQM-RHELGAIIYTSNVLGSRGPRKMQVSIPAVDEAADGADKPRGMGDILSK---MKAHEYGAGTSLVYMINKPPRWNDQVGAYVLNFNGRVTMASVKNFQLVQPDDQDAILLQFGRVGKDEFTMDFQWPMTPFQAFAITLSSFDSKIACD 256

[Close]

BLAST of NO06G02700 vs. NCBI_GenBank
Match: KUF94190.1 (Dihydroorotase [Phytophthora nicotianae])

HSP 1 Score: 285.8 bits (730), Expect = 2.700e-73
Identity = 146/270 (54.07%), Postives = 183/270 (67.78%), Query Frame = 0

Query:  255 VRRFVTHPIPRTAGVVHCYIKRRKAGTGKLYPEYHLYTRQGSHFLMAAKKQANNKTSNYHVTLNDRDFAKESPD-YLGKLRANFVGTEFQIFDRGSNGSTNSKGVDGAEVLGPNSGPSNASAPREELGVVVYAANVLGARGPRKMQAFLPRVSKVDDRMVVWKSKEDLAEQDAMLERVRRGDTAKFHHFINKPPRWNDQVGAYVLNFMGRVTMASVKNFQLIEPEDHELVVLQFGRVGRHDFTMDVRWPFTPLQALAVALSSFDSKIACD 524
            +R F   PIP+   VV CYI+R K+G  K++PEY LY ++G  FL+ AKK+  N+TSNY ++L   D  +   D Y+GKLRANF+GTEF I+D GS    N K  D   +       SN +  R+ELG+ +YAANVLG RGPRKM+  +PRV + D   VVW+    L ++D M+ + +  D     + INKPPRWNDQV AYVLNF GRVTMASVKNFQL+ PED E VVLQFGRVG+  FTMD RWP  PLQA A+ LSSFDSK+AC+
Sbjct:    1 MRAFTMRPIPKAYDVVECYIERNKSGANKMFPEYCLYMKEGDRFLLTAKKRPKNRTSNYLISLQRGDLLRRGSDNYVGKLRANFLGTEFTIYDNGS----NPKDADQQTI------TSNPAGIRQELGIAMYAANVLGHRGPRKMKVCVPRV-REDGTRVVWR---PLTKEDEMVNKCKEQDHTNLTYLINKPPRWNDQVCAYVLNFNGRVTMASVKNFQLVTPEDQETVVLQFGRVGKDLFTMDFRWPLCPLQAFAITLSSFDSKLACE 256

[Close]

BLAST of NO06G02700 vs. NCBI_GenBank
Match: XP_008619360.1 (hypothetical protein SDRG_14976 [Saprolegnia diclina VS20] >EQC27173.1 hypothetical protein SDRG_14976 [Saprolegnia diclina VS20])

HSP 1 Score: 280.0 bits (715), Expect = 1.500e-71
Identity = 142/271 (52.40%), Postives = 186/271 (68.63%), Query Frame = 0

Query:  254 DVRRFVTHPIPRTAGVVHCYIKRRKAGTGKLYPEYHLYTRQGSHFLMAAKKQANNKTSNYHVTLNDRDFA-KESPDYLGKLRANFVGTEFQIFDRGSNGSTNSKGVDGAEVLGPNSGPSNASAPREELGVVVYAANVLGARGPRKMQAFLPRVSKVDDRMVVWKSKEDLAEQDAMLERVRRGDTAKFHHFINKPPRWNDQVGAYVLNFMGRVTMASVKNFQLIEPEDHELVVLQFGRVGRHDFTMDVRWPFTPLQALAVALSSFDSKIACD 524
            D++ F+  P+P+   VV CYI+R ++G+ K++PEY LY + G  FL+ AKK+ NN+TSNY +++   D A K S ++LGKLRANF+GTEF I+D G     N K  D       ++   N +  R+ELG+ VYA NVLG RGPRKM+  +PRV + D   VVW+    + ++D M+ + +  D     + INKPPRWNDQVGAYVLNF GRVTMASVKNFQL+ PED E V+LQFGRVG+  FTMD R P  PLQA A+ LSSFDSK+AC+
Sbjct:  274 DMKAFLMRPVPKACDVVECYIERNRSGSNKMFPEYCLYLKDGDRFLLTAKKRPNNRTSNYLISMQLGDLARKGSENFLGKLRANFIGTEFVIYDNG----MNPKSAD------QHTLTVNPAGIRQELGIAVYAKNVLGHRGPRKMKVCVPRV-REDGTRVVWR---PVTKEDEMVNKCKEQDHTNLTYLINKPPRWNDQVGAYVLNFNGRVTMASVKNFQLVTPEDQETVILQFGRVGKELFTMDFRAPLCPLQAFAITLSSFDSKLACE 530

The following BLAST results are available for this feature:

BLAST of NO06G02700 vs. NCBI_GenBank

BLAST of NO06G02700 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
XP_002906981.1	1.400e-74	54.61	tubby-like protein [Phytophthora infestans T30-4] ...	[more]
OWZ23071.1	1.900e-74	54.24	Tubby [Phytophthora megakarya]	[more]
XP_009538599.1	3.200e-74	54.24	hypothetical protein PHYSODRAFT_319932 [Phytophtho...	[more]
ETI38374.1	4.200e-74	54.24	hypothetical protein F443_15874 [Phytophthora para...	[more]
XP_008895473.1	4.200e-74	54.24	hypothetical protein PPTG_04886 [Phytophthora para...	[more]
XP_024573214.1	4.200e-74	54.61	Tub family proteins [Plasmopara halstedii] >CEG368...	[more]
KUF94661.1	4.200e-74	54.24	Tubby protein [Phytophthora nicotianae]	[more]
XP_009033946.1	5.400e-74	52.22	hypothetical protein AURANDRAFT_20811, partial [Au...	[more]
KUF94190.1	2.700e-73	54.07	Dihydroorotase [Phytophthora nicotianae]	[more]
XP_008619360.1	1.500e-71	52.40	hypothetical protein SDRG_14976 [Saprolegnia dicli...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL091	nonsL091	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR028	ncniR028	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR147	ngnoR147	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK000187	NSK000187	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO06G02700.1	NO06G02700.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|531073	gene_6596	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO06G02700.1	NO06G02700.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO06G02700 ID=NO06G02700|Name=NO06G02700|organism=Nannochloropsis oceanica|type=gene|length=1664bp
ACCAGCAACCAAACAGCATACATGAATGACGGGCAAAGTGACAGAGACTG
TGTTGCTGATCCACTACCACCTCCGCTTGTACCGTCCTCAAGCAGCGGCA
CTTGTACTTTCTTACCCTCCACGTCCACGCCTGCGAAGTTCTCTTTCGCC
TCCTCAGATAGCTATAACGGGAGCAGTGAAATGAAAGCGCACATTCTGGC
ACAACAGCGGGAGGTCATGCTGCGGCGCCGGCACGAAGGCATGCGGGCAG
AAGCTGTGCGCTCTGTCGAAGATCCCTCCTCGCTCTCTTCGACGACGGCT
TCAGCATACCACACACCGGGCATAAAGCAATTTTCCATGCCCCAAACCGG
AGAGGATGAAAACCGAGCGAACCAAAATGTTGCTAAACAAAGCAAGCGCG
TGGTACCCATGCCCCAAGGGCCGCCGCCCACACCGGCCTCAAGGCGCATT
CATTCCTATCGGGCCCACATTTCCTCTTCCTCGTCCTTTGACAATAAAAA
GGAAGCAGCCACTTCCAAACCCCCTTCCAAGCCTTCAAGAGGACCTCCAG
CCACGACATCACTCAACGCCAATGACGAAAGCGAGTCCTCCGATTCGGAG
GGAGACAACGACGAAAGCCCGCCGGGCAACAGTAAGACCTCCCCCCCCAC
CTCCCTGTCCCTCAAAAACGACGATGATAGTGGCGTCGATGACAGCATAT
CCGTTAATGCTGCCTTGGCTTTTCAAACTTCAGAATCTACCCGCTCTTTG
GACCTGAACATCCTCCTAGCCACCCGCGCGGACGTCCGTCGTTTTGTCAC
TCACCCTATCCCCCGCACCGCCGGCGTCGTGCATTGTTATATCAAGCGTC
GCAAAGCCGGGACCGGTAAACTCTATCCCGAGTATCACCTTTATACACGT
CAAGGGAGCCATTTCCTAATGGCGGCCAAGAAACAAGCGAATAACAAGAC
GTCCAACTACCACGTGACGTTAAACGACCGCGATTTCGCGAAGGAAAGCC
CCGATTACCTAGGGAAGCTCCGTGCAAATTTTGTGGGGACAGAATTCCAG
ATCTTCGACCGCGGAAGCAACGGCAGCACCAACAGCAAAGGTGTAGATGG
GGCGGAGGTACTTGGGCCGAATAGTGGACCGTCAAATGCCAGTGCGCCGA
GGGAAGAGTTAGGGGTGGTGGTGTACGCTGCGAATGTACTAGGTGCGCGA
GGTCCCCGAAAAATGCAAGCATTTTTACCGCGTGTTAGTAAGGTAGACGA
CCGAATGGTGGTATGGAAGTCCAAGGAGGATCTGGCGGAGCAGGATGCGA
TGCTTGAGAGGGTCCGGAGGGGGGATACGGCGAAGTTTCATCATTTTATT
AATAAGCCCCCTAGGTGGAATGACCAGGTAGGGGCGTACGTGTTGAATTT
TATGGGAAGGGTGACCATGGCTTCGGTGAAGAATTTTCAATTGATTGAGC
CTGAAGACCATGAGTTGGTGGTGTTGCAGTTTGGACGGGTGGGGAGGCAC
GATTTTACAATGGATGTCAGGTGGCCCTTCACACCCCTACAGGCTTTGGC
GGTGGCGTTGAGTTCGTTTGATTCGAAGATTGCGTGTGATTAGGAAAAGA
AAAAGAAGGTAGAAGAACAAAGAGGTATACAGGAGAATAAGGAAAGTAGC
AATTTTATTTACGC

protein sequence of NO06G02700.1

>NO06G02700.1-protein ID=NO06G02700.1-protein|Name=NO06G02700.1|organism=Nannochloropsis oceanica|type=polypeptide|length=524bp
MNDGQSDRDCVADPLPPPLVPSSSSGTCTFLPSTSTPAKFSFASSDSYNG
SSEMKAHILAQQREVMLRRRHEGMRAEAVRSVEDPSSLSSTTASAYHTPG
IKQFSMPQTGEDENRANQNVAKQSKRVVPMPQGPPPTPASRRIHSYRAHI
SSSSSFDNKKEAATSKPPSKPSRGPPATTSLNANDESESSDSEGDNDESP
PGNSKTSPPTSLSLKNDDDSGVDDSISVNAALAFQTSESTRSLDLNILLA
TRADVRRFVTHPIPRTAGVVHCYIKRRKAGTGKLYPEYHLYTRQGSHFLM
AAKKQANNKTSNYHVTLNDRDFAKESPDYLGKLRANFVGTEFQIFDRGSN
GSTNSKGVDGAEVLGPNSGPSNASAPREELGVVVYAANVLGARGPRKMQA
FLPRVSKVDDRMVVWKSKEDLAEQDAMLERVRRGDTAKFHHFINKPPRWN
DQVGAYVLNFMGRVTMASVKNFQLIEPEDHELVVLQFGRVGRHDFTMDVR
WPFTPLQALAVALSSFDSKIACD*

Synonyms

Publications