NO06G02420, NO06G02420 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G02420 vs. NCBI_GenBank
Match: EWM26213.1 (hypothetical protein Naga_100025g68 [Nannochloropsis gaditana]) HSP 1 Score: 160.2 bits (404), Expect = 4.400e-36 Identity = 88/134 (65.67%), Postives = 103/134 (76.87%), Query Frame = 0 Query: 1 MPSLMTTLRDLQERHKRFVKKVHAFRIPLSPQGKAVAQVVYFSVPVVAGYFIMGWATDRAKAEIQYSDDYDEAKKTSGFGRARATGTGGDGVEAERVKKAMRVTPETASMEDQIARQNMGLQSYLDSIRHQKKR 135 M SLM T+RD Q+RH+RFVK+VHAFRIPLSP KAVAQVVYFS+P+VAGYFIMGWATDRAKAEIQYSD +EA++T R G EA RV KAMRV ++++QIARQN+GLQSYLDSIR K+ Sbjct: 43 MSSLMATVRDWQDRHRRFVKRVHAFRIPLSPPAKAVAQVVYFSIPLVAGYFIMGWATDRAKAEIQYSDS-NEAEET------RIRRDASQGEEATRVFKAMRVDRGGGAIDEQIARQNLGLQSYLDSIRESGKK 169
BLAST of NO06G02420 vs. NCBI_GenBank
Match: GAX98263.1 (Hypothetical protein PINS_006130 [Pythium insidiosum]) HSP 1 Score: 72.0 bits (175), Expect = 1.600e-9 Identity = 32/66 (48.48%), Postives = 44/66 (66.67%), Query Frame = 0 Query: 4 LMTTLRDLQERHKRFVKKVHAFRIPLSPQGKAVAQVVYFSVPVVAGYFIMGWATDRAKAEIQYSDD 70 +++ LRD+ H+R K+VHAFRIPLS G+ VVYFS+PV+ GYF+M WA RA+ +D Sbjct: 1 MLSFLRDIGAAHERLKKRVHAFRIPLSKNGQRAMGVVYFSIPVIGGYFVMKWAERRAERNFALEED 66
BLAST of NO06G02420 vs. NCBI_GenBank
Match: XP_008867574.1 (hypothetical protein H310_04836 [Aphanomyces invadans] >ETW03345.1 hypothetical protein H310_04836 [Aphanomyces invadans]) HSP 1 Score: 70.9 bits (172), Expect = 3.500e-9 Identity = 33/75 (44.00%), Postives = 48/75 (64.00%), Query Frame = 0 Query: 5 MTTLRDLQERHKRFVKKVHAFRIPLSPQGKAVAQVVYFSVPVVAGYFIMGWATDRAKAEIQYSDDYDEAKKTSGF 80 M +RD + H+R K++H+ RIPL P+GKAV VVYF+ P++ GYF+M WA ++KAE+ D + S F Sbjct: 1 MGVVRDFLDAHERLKKRIHSTRIPLGPKGKAVMTVVYFTTPIICGYFVMQWA--QSKAEVNLKDLSIPTRNPSSF 73
BLAST of NO06G02420 vs. NCBI_GenBank
Match: XP_009825352.1 (hypothetical protein H257_03100 [Aphanomyces astaci] >ETV85334.1 hypothetical protein H257_03100 [Aphanomyces astaci]) HSP 1 Score: 69.3 bits (168), Expect = 1.000e-8 Identity = 33/75 (44.00%), Postives = 46/75 (61.33%), Query Frame = 0 Query: 5 MTTLRDLQERHKRFVKKVHAFRIPLSPQGKAVAQVVYFSVPVVAGYFIMGWATDRAKAEIQYSDDYDEAKKTSGF 80 M RD + H+R K++H+ RIPL P+GKAV VYF+ P+V GYF+M WA ++KAE+ D + S F Sbjct: 1 MGVFRDFVDAHERLKKRIHSTRIPLGPKGKAVMTAVYFTTPIVCGYFVMQWA--QSKAEVNLKDVTLTTRNPSSF 73
BLAST of NO06G02420 vs. NCBI_GenBank
Match: XP_012194487.1 (hypothetical protein SPRG_00884 [Saprolegnia parasitica CBS 223.65] >KDO34823.1 hypothetical protein SPRG_00884 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 68.2 bits (165), Expect = 2.300e-8 Identity = 30/61 (49.18%), Postives = 41/61 (67.21%), Query Frame = 0 Query: 5 MTTLRDLQERHKRFVKKVHAFRIPLSPQGKAVAQVVYFSVPVVAGYFIMGWATDRAKAEIQ 66 M LRDL + H R K++H RIPLSP G V +VVYF+ P++ GYF+M WA R+ A ++ Sbjct: 1 MGWLRDLSDAHTRLKKRIHGTRIPLSPAGIRVMKVVYFTTPIIGGYFVMQWAQARSAANLR 61
BLAST of NO06G02420 vs. NCBI_GenBank
Match: OQR86386.1 (calcyphosin [Achlya hypogyna]) HSP 1 Score: 67.8 bits (164), Expect = 3.000e-8 Identity = 29/61 (47.54%), Postives = 42/61 (68.85%), Query Frame = 0 Query: 5 MTTLRDLQERHKRFVKKVHAFRIPLSPQGKAVAQVVYFSVPVVAGYFIMGWATDRAKAEIQ 66 M LRDL + H R KK+H RIPLSP G + +VVYF+ P++ GYF+M WA +R+ + ++ Sbjct: 1 MGWLRDLSDAHTRLKKKIHGTRIPLSPAGIRMMKVVYFTTPIIGGYFVMQWAQNRSVSNLR 61
BLAST of NO06G02420 vs. NCBI_GenBank
Match: ETL92597.1 (hypothetical protein L917_09134 [Phytophthora parasitica]) HSP 1 Score: 66.2 bits (160), Expect = 8.700e-8 Identity = 32/74 (43.24%), Postives = 46/74 (62.16%), Query Frame = 0 Query: 5 MTTLRDLQERHKRFVKKVHAFRIPLSPQGKAVAQVVYFSVPVVAGYFIMGWATDRAKAEIQYSDDYDEAKKTSG 79 M LR L ERH+ KK+H+ RIPLS G+ V +VYF+ P++ GY++M WA RA A Q + E ++ +G Sbjct: 1 MEFLRRLGERHEALKKKIHSTRIPLSKSGQRVMGLVYFTTPIIGGYYVMKWAESRADANFQLEE--TEIRRAAG 72
BLAST of NO06G02420 vs. NCBI_GenBank
Match: ETP43953.1 (hypothetical protein F442_09412 [Phytophthora parasitica P10297]) HSP 1 Score: 66.2 bits (160), Expect = 8.700e-8 Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 0 Query: 5 MTTLRDLQERHKRFVKKVHAFRIPLSPQGKAVAQVVYFSVPVVAGYFIMGWATDRAKAEIQYSDDYDEAKKTSG 79 M LR L ERH+ KK+H+ RIPLS G+ V +VYF+ P++ GY++M WA +RA A Q + E ++ +G Sbjct: 1 MEFLRRLGERHEALKKKIHSTRIPLSKSGQRVMGLVYFTTPIIGGYYVMKWAENRADANFQREE--TEIRRAAG 72
BLAST of NO06G02420 vs. NCBI_GenBank
Match: ETI46081.1 (hypothetical protein F443_09497 [Phytophthora parasitica P1569] >ETK86034.1 hypothetical protein L915_09305 [Phytophthora parasitica] >ETL39464.1 hypothetical protein L916_09210 [Phytophthora parasitica] >ETM45887.1 hypothetical protein L914_09166 [Phytophthora parasitica] >ETO74767.1 hypothetical protein F444_09567 [Phytophthora parasitica P1976] >ETP15902.1 hypothetical protein F441_09442 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 65.9 bits (159), Expect = 1.100e-7 Identity = 32/74 (43.24%), Postives = 46/74 (62.16%), Query Frame = 0 Query: 5 MTTLRDLQERHKRFVKKVHAFRIPLSPQGKAVAQVVYFSVPVVAGYFIMGWATDRAKAEIQYSDDYDEAKKTSG 79 M LR L ERH+ KK+H+ RIPLS G+ V +VYF+ P++ GY++M WA RA A Q + E ++ +G Sbjct: 1 MEFLRRLGERHEALKKKIHSTRIPLSKSGQRVMGLVYFTTPIIGGYYVMKWAESRADANFQREE--TEIRRAAG 72
BLAST of NO06G02420 vs. NCBI_GenBank
Match: XP_008605159.1 (hypothetical protein SDRG_01413 [Saprolegnia diclina VS20] >EQC41445.1 hypothetical protein SDRG_01413 [Saprolegnia diclina VS20]) HSP 1 Score: 65.1 bits (157), Expect = 1.900e-7 Identity = 29/61 (47.54%), Postives = 40/61 (65.57%), Query Frame = 0 Query: 5 MTTLRDLQERHKRFVKKVHAFRIPLSPQGKAVAQVVYFSVPVVAGYFIMGWATDRAKAEIQ 66 M LRDL + H R K++H RIPLSP G +VVYF+ P++ GYF+M WA R+ A ++ Sbjct: 1 MGWLRDLGDAHTRLKKRIHGTRIPLSPAGIRFMKVVYFTTPIIGGYFVMQWAQARSVANLR 61 The following BLAST results are available for this feature:
BLAST of NO06G02420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 14
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G02420 ID=NO06G02420|Name=NO06G02420|organism=Nannochloropsis oceanica|type=gene|length=405bpback to top protein sequence of NO06G02420.1 >NO06G02420.1-protein ID=NO06G02420.1-protein|Name=NO06G02420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=135bpback to top Synonyms
Publications
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