NO06G02360, NO06G02360 (gene) Nannochloropsis oceanica

Overview
NameNO06G02360
Unique NameNO06G02360
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2189
Alignment locationchr6:678328..680516 -

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Properties
Property NameValue
DescriptionBolA-like family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:678328..680516 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036065BolA-like_sf
IPR002634BolA
Homology
BLAST of NO06G02360 vs. NCBI_GenBank
Match: OQR80949.1 (hypothetical protein ACHHYP_16974 [Achlya hypogyna])

HSP 1 Score: 89.0 bits (219), Expect = 1.200e-14
Identity = 41/76 (53.95%), Postives = 55/76 (72.37%), Query Frame = 0
Query:   56 SLAREERMRTLLTEHFKPTNLLIQDVSGGCGAMYNMEVESELFKGKTLVAQHRMVNQVLAKEISEMHGLSLKTRAP 132
            S A EE+M   L +    T++ + D+SGGCG+MY +EV S  F+GK +VAQHR+VNQVL +EI+ MHGL+LKT  P
Sbjct:   15 SSAAEEKMAVALRQELSATHVKVDDISGGCGSMYKIEVASPTFEGKNVVAQHRLVNQVLKEEIAGMHGLTLKTYTP 90          
BLAST of NO06G02360 vs. NCBI_GenBank
Match: CCI46795.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 87.0 bits (214), Expect = 4.700e-14
Identity = 43/83 (51.81%), Postives = 60/83 (72.29%), Query Frame = 0
Query:   52 NSAESLAREER-MRTLLTEHFKPTNLLIQDVSGGCGAMYNMEVESELFKGKTLVAQHRMVNQVLAKEISEMHGLSLKTRAPKK 134
            NS++S +  E  M+T L E FK +++ + DVSGGCG+MYN++V S  F+GK+ V QHRMVN+VL  EI  MHGL+++T  P K
Sbjct: 1432 NSSQSASDVEMDMKTKLMESFKASDVEVTDVSGGCGSMYNIKVVSSQFEGKSRVIQHRMVNEVLKNEIKGMHGLTIRTETPAK 1514          
BLAST of NO06G02360 vs. NCBI_GenBank
Match: XP_003729372.1 (PREDICTED: bolA-like protein 3 [Strongylocentrotus purpuratus])

HSP 1 Score: 87.0 bits (214), Expect = 4.700e-14
Identity = 38/80 (47.50%), Postives = 60/80 (75.00%), Query Frame = 0
Query:   55 ESLAREERMRTLLTEHF-KPTNLLIQDVSGGCGAMYNMEVESELFKGKTLVAQHRMVNQVLAKEISEMHGLSLKTRAPKK 134
            +++ RE R++++L E F   T++ ++D+SGGCGAMY + VES++FKGK  V QH +VN+ LA+E+ EMHGL + T  P++
Sbjct:   30 DAMDRERRIKSVLQEKFPTATDIQVEDISGGCGAMYQIHVESDVFKGKRTVQQHMLVNKALAEEVKEMHGLRISTTVPEE 109          
BLAST of NO06G02360 vs. NCBI_GenBank
Match: PPJ55497.1 (hypothetical protein CBER1_07058 [Cercospora berteroae])

HSP 1 Score: 87.0 bits (214), Expect = 4.700e-14
Identity = 37/74 (50.00%), Postives = 54/74 (72.97%), Query Frame = 0
Query:   58 AREERMRTLLTEHFKPTNLLIQDVSGGCGAMYNMEVESELFKGKTLVAQHRMVNQVLAKEISEMHGLSLKTRAP 132
            A E R+  +L +   PT L +QD+SGGCG+MY +++ SE FKG  ++ QHR+VN+VL +EI + HG+ LKT+AP
Sbjct:   61 ANERRIFDILVQDLSPTKLEVQDISGGCGSMYALDIVSEAFKGLPVIKQHRLVNKVLGEEIKKWHGVQLKTKAP 134          
BLAST of NO06G02360 vs. NCBI_GenBank
Match: XP_002618008.1 (hypothetical protein CLUG_01467 [Clavispora lusitaniae ATCC 42720] >EEQ37344.1 hypothetical protein CLUG_01467 [Clavispora lusitaniae ATCC 42720])

HSP 1 Score: 86.7 bits (213), Expect = 6.200e-14
Identity = 39/71 (54.93%), Postives = 54/71 (76.06%), Query Frame = 0
Query:   60 EERMRTLLTEHFKPTNLLIQDVSGGCGAMYNMEVESELFKGKTLVAQHRMVNQVLAKEISEMHGLSLKTRA 131
            E+++  +L  HF P NL ++DVSGGCG+M+ + VESE FKG  +V QHR+VN+VL  EI++ HGL L+TRA
Sbjct:   79 EQKIYDILKTHFAPKNLAVRDVSGGCGSMFAITVESEKFKGIPMVKQHRLVNEVLKDEIAKWHGLQLQTRA 149          
BLAST of NO06G02360 vs. NCBI_GenBank
Match: OVF09130.1 (putative altered inheritance of mitochondria protein [Clavispora lusitaniae])

HSP 1 Score: 86.7 bits (213), Expect = 6.200e-14
Identity = 39/71 (54.93%), Postives = 54/71 (76.06%), Query Frame = 0
Query:   60 EERMRTLLTEHFKPTNLLIQDVSGGCGAMYNMEVESELFKGKTLVAQHRMVNQVLAKEISEMHGLSLKTRA 131
            E+++  +L  HF P NL ++DVSGGCG+M+ + VESE FKG  +V QHR+VN+VL  EI++ HGL L+TRA
Sbjct:   40 EQKIYDILKTHFAPKNLAVRDVSGGCGSMFAITVESEKFKGIPMVKQHRLVNEVLKDEIAKWHGLQLQTRA 110          
BLAST of NO06G02360 vs. NCBI_GenBank
Match: XP_018170622.2 (hypothetical protein QG37_01768 [[Candida] auris] >KNE00899.2 hypothetical protein QG37_01768 [[Candida] auris] >PIS51830.1 hypothetical protein B9J08_003431 [[Candida] auris] >PIS53818.1 hypothetical protein CJI97_003506 [[Candida] auris] >PSK50898.1 hypothetical protein CJI96_001034 [[Candida] auris])

HSP 1 Score: 86.7 bits (213), Expect = 6.200e-14
Identity = 36/71 (50.70%), Postives = 56/71 (78.87%), Query Frame = 0
Query:   60 EERMRTLLTEHFKPTNLLIQDVSGGCGAMYNMEVESELFKGKTLVAQHRMVNQVLAKEISEMHGLSLKTRA 131
            E+++  +L  HF+P+NL ++D+SGGCG+M+ + VES  FKG  ++ QHR+VN+VL +EI++ HGL LKT+A
Sbjct:   45 EQKIYDILKAHFEPSNLQVRDISGGCGSMFAITVESSQFKGIPMIKQHRLVNEVLKEEIAQWHGLQLKTKA 115          
BLAST of NO06G02360 vs. NCBI_GenBank
Match: PSK75763.1 (hypothetical protein CJJ07_004426 [[Candida] auris])

HSP 1 Score: 86.7 bits (213), Expect = 6.200e-14
Identity = 36/71 (50.70%), Postives = 56/71 (78.87%), Query Frame = 0
Query:   60 EERMRTLLTEHFKPTNLLIQDVSGGCGAMYNMEVESELFKGKTLVAQHRMVNQVLAKEISEMHGLSLKTRA 131
            E+++  +L  HF+P+NL ++D+SGGCG+M+ + VES  FKG  ++ QHR+VN+VL +EI++ HGL LKT+A
Sbjct:   45 EQKIYDILKAHFEPSNLQVRDISGGCGSMFAITVESSQFKGIPMIKQHRLVNEVLKEEIAQWHGLQLKTKA 115          
BLAST of NO06G02360 vs. NCBI_GenBank
Match: XP_013019564.1 (eukaryotic protein [Schizosaccharomyces octosporus yFS286] >EPX70934.1 eukaryotic protein [Schizosaccharomyces octosporus yFS286])

HSP 1 Score: 86.3 bits (212), Expect = 8.100e-14
Identity = 39/74 (52.70%), Postives = 55/74 (74.32%), Query Frame = 0
Query:   60 EERMRTLLTEHFKPTNLLIQDVSGGCGAMYNMEVESELFKGKTLVAQHRMVNQVLAKEISEMHGLSLKTRAPKK 134
            E R+RTLL E   P++L + DVSGGCG+MY + ++S+LFKGK  +AQHR+VN +L +EI  MHGL+L T   ++
Sbjct:   36 ESRIRTLLNERLCPSSLRVIDVSGGCGSMYQIVIKSKLFKGKNTLAQHRLVNSILKEEIKGMHGLNLLTEVDEE 109          
BLAST of NO06G02360 vs. NCBI_GenBank
Match: CCA16610.1 (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 85.9 bits (211), Expect = 1.100e-13
Identity = 40/72 (55.56%), Postives = 52/72 (72.22%), Query Frame = 0
Query:   60 EERMRTLLTEHFKPTNLLIQDVSGGCGAMYNMEVESELFKGKTLVAQHRMVNQVLAKEISEMHGLSLKTRAP 132
            E  MRT L +  K T++ + DVSGGCG+MYN++V S  F+GK+ V QHRMVN+VL  EI  MHGL++KT  P
Sbjct: 1488 ETHMRTKLMDSLKATDVQVTDVSGGCGSMYNVKVVSSQFEGKSRVIQHRMVNEVLKDEIKGMHGLTIKTSTP 1559          
The following BLAST results are available for this feature:
BLAST of NO06G02360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
OQR80949.11.200e-1453.95hypothetical protein ACHHYP_16974 [Achlya hypogyna... [more]
CCI46795.14.700e-1451.81unnamed protein product [Albugo candida][more]
XP_003729372.14.700e-1447.50PREDICTED: bolA-like protein 3 [Strongylocentrotus... [more]
PPJ55497.14.700e-1450.00hypothetical protein CBER1_07058 [Cercospora berte... [more]
XP_002618008.16.200e-1454.93hypothetical protein CLUG_01467 [Clavispora lusita... [more]
OVF09130.16.200e-1454.93putative altered inheritance of mitochondria prote... [more]
XP_018170622.26.200e-1450.70hypothetical protein QG37_01768 [[Candida] auris] ... [more]
PSK75763.16.200e-1450.70hypothetical protein CJJ07_004426 [[Candida] auris... [more]
XP_013019564.18.100e-1452.70eukaryotic protein [Schizosaccharomyces octosporus... [more]
CCA16610.11.100e-1355.56conserved hypothetical protein [Albugo laibachii N... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G02360.1NO06G02360.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597328gene_6554Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G02360.1NO06G02360.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G02360 ID=NO06G02360|Name=NO06G02360|organism=Nannochloropsis oceanica|type=gene|length=2189bp
TTTCCTGAGTTACCCCCCTCTATTGCACCGTCCATTCCTTTAAAGTCATT
GTTAATCATTGTACCTACTTTAGTAATACACTATTTATCCTTCTAACTCC
TCCCCCCCCTCATCCTCCGTCTCCTTATCCTCCTCGTCTTCTTCTTCGCG
TTGTTCTTCATCTGTACCATCCTACGGTCGTTGTCGTCGCTCCATTCTGT
AAGGCAAGCTTCTATAATTACCATATATGATCTTACCTGTCACACAATCT
GTTCCGCGGTCGTTCACACACAACATTTCCCTCGTCAACAGCAAATCATC
CTCAATCTTCAACTGAATACCCGCATCTCTCTGCGACTGAACCAAACAAA
AACCGTCGCGCATCACCCCTCGAAAACTCACCCCATCATCTTCTTCGTCA
CTTGTCTTAAAGTTGGAGACGCTCCAAATAACGCTACAACCTTCCAATTC
CTCCACCACCTCTGCCAGCTCTACCTGTGTCTGAGGCAACAAATTCAAGT
CATATTTATTCTGCCTCATCATACCCTCGAATTCCGGGGTGAATCGATGT
AGCCGCATTTCCAGAAAAGGCGGAGGAGGTAAAAAAAATGATGCCCCGCA
CTCCTCATCTTCATCGTCGTCGGCGGCCGGAGGGGGAGGGTGGAAGCTGT
AGACACGGCAGCGGAAGACAGCCTCGGGTCGGCCATCAAAATAGTAGGTG
GCGCCCAAGAAAAATTGCGCATCACCACCAAAACTTCCTGCGGGTAGATC
TAGAGGCGTCAAGATGCAATGAATCTGTTCATGTCCACCGGCAGGTCCCG
CCTCTATGCCTTGTGCTCGCTCCGACACCACCTGCGCCGCGTTGTCGAAC
TCGCCTTGGAAGTACAAGCGGAATAAAGGAAGAGAGCCATTATCATCGTC
AAAGCATTCCGCCCCGGCTTGAGCACGCCATAGAAACGCGCGTTGTCTTG
GTGAAAAGTACCCGCTGATCGGGAAGGCTTGGGATATGGGTGATGGTCCC
AACAGGAGGAGGAGCATCAGGAGACTTGCGGGAGGCAGGAGGTTGAAGCG
AGGCATGGCTCCGTTGTGCGATGGAAGCCCCTAGTGATGCAGCAACCAAG
GTTATTGTATGTCTTTATCTTTCCTGTTGTTATGGTGGTGGATTTGCGAG
CTTAAATAGTGAGAACATCAGTGAGAGGTGTTCAAAGAACGACATTTGCC
GCTCATGATGTGTCGGTGCCGTTGCTTGCTTGCCTCCTTCATTCCCATCC
TCACAACCACTTCACACGCAAAAACATGCAGAGAGTACTACGATAGCCAT
GCGGCGCGCTGTTGGCACCATATTGGTAGACGTCTCTGCCTCTGCGACCA
GAAGACCTGCGAATGCTACAGTAGCTATCTCCTCCCTTGGCCGACCTCTC
TACCCAACTACATCTCGCTTCCGGCGGTCTTTGGCCTCTGATGTCGACGG
CAACAGTGCCGAGTCCCTGGCTCGGGAGGAACGTATGCGTACATTACTAA
CAGAGCACTTCAAGCCGACAAATCTCCTGATTCAGGACGTCTCCGgtacg
tgacatgggcagggggcaagggcggagacgtgcgtggtgggacggaagga
ctgggaggaaatgaggcagggaggatcgattcatggcccaagaagtggac
ttgcacacagacatccgcgctatcattctatttgtcaacacgctcattat
tgaaatagGCGGGTGCGGAGCGATGTACAACATGGAAGTTGAGTCAGAGT
TGTTCAAGGGCAAGACGTTAGTGGCGCAGCACAGGATGGTCAATCAGgta
cgcgtatgcgggagcggagaagcatcgtacaacgaaagggcaggtgataa
ataattcgggaaagttatccgatagagcaagagaagacatcgcgtcaccg
gtgacatgttctctgtggctcacacatacgtattctcctccccgaaacca
tccacacggcaacttactcagGTACTGGCGAAGGAGATTTCCGAGATGCA
CGGTTTGTCGCTTAAAACACGCGCGCCCAAGAAGCAATAGAATCGGAGGG
TAACAACAACTGGGGAAATGGGAAAAGTAAATAGGGGCAAACGAATGGGA
TCACGCACACATATGACAAGACCGACATGGCCGACGAGAAGGAAGAGAAG
GAAGGATTGAGGTGATATCGATGGCAATGATAATGGTGG
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protein sequence of NO06G02360.1

>NO06G02360.1-protein ID=NO06G02360.1-protein|Name=NO06G02360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=135bp
MRRAVGTILVDVSASATRRPANATVAISSLGRPLYPTTSRFRRSLASDVD
GNSAESLAREERMRTLLTEHFKPTNLLIQDVSGGCGAMYNMEVESELFKG
KTLVAQHRMVNQVLAKEISEMHGLSLKTRAPKKQ*
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Synonyms
Publications