NO06G01870, NO06G01870 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G01870 vs. NCBI_GenBank
Match: EWM26239.1 (Protein of unknown function DUF1997 [Nannochloropsis gaditana]) HSP 1 Score: 337.4 bits (864), Expect = 4.600e-89 Identity = 177/216 (81.94%), Postives = 187/216 (86.57%), Query Frame = 0 Query: 87 SQKEFFRLAQGKMEFGTVDEVELLLWEEPALIRRYLTERPDRVLLATWDAELVDRQDRDVFRLTTKPMSFVHLSLQPSIDVRLTAAPPLSLENEVGNVGVDGGQHLLLVESLAHSMNGMEQILGQRFAESLKIDVTGKLRAVPPPLGPGGLRGPGPVRLVGEVVFVTSGQLPLLFSLTPRSVLEGAAIAINRRIMSYAKGKFVKNLAKDFDRWAAS 303 S KEFFRLA+GKMEFGTVDEVELLLW+EPALIRRYLTE PDRVLLATWDAELVDR+ RDVFRLTTKPMSFVHLSLQPSIDVRLTA PP + E + G HLL VESL HSMNG+EQILGQRFAESL+IDVTGKLRA PP PG +G GPVRLVGEVVFVTSGQLP L SLTPR VLE AAIAINRRIMSYAKGKFVKNLAKDF+RW+AS Sbjct: 68 SPKEFFRLARGKMEFGTVDEVELLLWDEPALIRRYLTESPDRVLLATWDAELVDRRARDVFRLTTKPMSFVHLSLQPSIDVRLTAIPPEAGREE---GAPESGGHLLSVESLGHSMNGLEQILGQRFAESLRIDVTGKLRAHVPPARPGDSKGRGPVRLVGEVVFVTSGQLPSLLSLTPRPVLESAAIAINRRIMSYAKGKFVKNLAKDFNRWSAS 280
BLAST of NO06G01870 vs. NCBI_GenBank
Match: CBJ30238.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 90.1 bits (222), Expect = 1.300e-14 Identity = 59/212 (27.83%), Postives = 102/212 (48.11%), Query Frame = 0 Query: 90 EFFRLAQGKM-EFGTVDEVELLLWEEPALIRRYLTERPDRVLLATWDAELVDRQDRDVFRLTTKPMSFVHLSLQPSIDVRLTAAPPLSLENEVGNVGVDGGQHLLLVESLAHSMNGMEQILGQRFAESLKIDVTGKLRAVPPPLGPGGLRGPGPVRLVGEVVFVTSGQLPLLFSLTPRSVLEGAAIAINRRIMSYAKGKFVKNLAKDFDRWA 301 E F+L G M EFG+ VE + P P R++ A W+ + + VFR+ + SF+ +S+ S+D++L A DG + +S+ +S++ M ++LGQ F ++ +++ GKLR L RL G+V G++P L S TP +++ AA+ IN +++ Y FV +A D+ +W+ Sbjct: 22 EQFKLKDGGMVEFGSGQRVEASISGAPLESMLEYISEPSRIVYACWEHKDIMDMGDGVFRMAFRGQSFLSISIDMSVDIQLWTAE-------------DG---TIQCKSVGYSVDDMAKLLGQEFVDTFFLELEGKLRVEETVTKVRALSLKN-TRLSGDVAVTIGGKMPGLLSATPEPLVKSAALGINNKVLEYVSNTFVSTVAGDYRKWS 216
BLAST of NO06G01870 vs. NCBI_GenBank
Match: WP_071188300.1 (DUF1997 domain-containing protein [Trichormus sp. NMC-1]) HSP 1 Score: 76.3 bits (186), Expect = 1.900e-10 Identity = 59/203 (29.06%), Postives = 97/203 (47.78%), Query Frame = 0 Query: 100 EFGTVDEVELLLWEEPALIRRYLTERPDRVLLATWDAELVDRQDRDVFRLTTKPMSFVHLSLQPSIDVRLTAAPPLSLENEVGNVGVDGGQHLLLVESLAHSMNGMEQILGQRFAESLKIDVTGKLRAVPPPLGPGGLRGPGPVRLVGEVVFVTSGQLPLLFSLTPRSVLEGAAIAINRRIMSYAKGKFVKNLAKDFDRWAAS 303 +F +E+ + ++P I YL +P R++ D +++ +VFRL +P++F+ LS+QP++D+R+ A Q + + SL + G E I QRFA +LK G L P LG G RL G+ +PL FSLTP+S+LE + + ++ K + + +L D+ RW S Sbjct: 4 KFTASQSLEIAVPKQPISIHHYL-RQPQRLVKTLADNSRIEQLSEEVFRLKMRPLAFMSLSIQPTVDMRVWA----------------DSQGTIYLRSLGCEILGFEYI-NQRFALNLK----GYLS--PYQLG-------GETRLQGKADLEVLVDIPLPFSLTPKSILEATGNGLLKSVLLTIKQRLLHHLLADYRRWVIS 175
BLAST of NO06G01870 vs. NCBI_GenBank
Match: WP_036530426.1 (DUF1997 domain-containing protein [Neosynechococcus sphagnicola] >KGF73858.1 hypothetical protein DO97_05640 [Neosynechococcus sphagnicola sy1]) HSP 1 Score: 74.7 bits (182), Expect = 5.600e-10 Identity = 58/209 (27.75%), Postives = 98/209 (46.89%), Query Frame = 0 Query: 99 MEFGTVDEVELLLWEEPALIRRYLTERPDRVLLATWDAELVDRQDRDVFRLTTKPMSFVHLSLQPSIDVRLTAAPPLSLENEVGNVGVDGGQHLLLVESLAHSMNGMEQILGQRFAESLKIDVTGKLRAVPPPLGPGGLRGPGPVRLVGEVVFVTSGQLPLLFSLTPRSVLEGAAIAINRRIMSYAKGKFVKNLAKDFDRWAASPAGAA 308 ++F +E+ + EEP I+ YL +P R++ A D ++ D FRL +P+SF+ LS+QP++D+++ A DG HL S+A + G+ I QRFA +++ G+L A + G L G+ +LP LTP+ +L+ + + ++ K + + L D+ RWA SP A Sbjct: 3 IQFVASQSIEIAVPEEPVPIQHYL-RQPQRLVQALVDPTRLESLGSDCFRLKMRPLSFLMLSIQPTVDMQVWATS-------------DGVIHL---RSIASEIRGVAYI-NQRFA----LNLVGQLAAT---------QVQGQTCLQGQADLTVHVELPTPLDLTPKPLLDATGNGLLKSVLLTIKQRLMHQLPLDYRRWADSPTEVA 180
BLAST of NO06G01870 vs. NCBI_GenBank
Match: WP_096657896.1 (DUF1997 domain-containing protein [Calothrix parasitica] >BAY85158.1 hypothetical protein NIES267_46570 [Calothrix parasitica NIES-267]) HSP 1 Score: 73.9 bits (180), Expect = 9.600e-10 Identity = 54/200 (27.00%), Postives = 93/200 (46.50%), Query Frame = 0 Query: 100 EFGTVDEVELLLWEEPALIRRYLTERPDRVLLATWDAELVDRQDRDVFRLTTKPMSFVHLSLQPSIDVRLTAAPPLSLENEVGNVGVDGGQHLLLVESLAHSMNGMEQILGQRFAESLKIDVTGKLRAVPPPLGPGGLRGPGPVRLVGEVVFVTSGQLPLLFSLTPRSVLEGAAIAINRRIMSYAKGKFVKNLAKDFDRW 300 +F VE+ + EP I+ YL +P R++ A D+ V++ +VFRL +P++F+ LS+QP +D+R+ G + +ES+ + G++ I QRF K+D+ G L G RL G +LP FS TP+++LE + + ++ K + ++ L D+ RW Sbjct: 4 QFKACQSVEIPVTYEPIPIKHYL-RQPQRLVNALADSSRVEQLSAEVFRLKMRPLAFMSLSIQPIVDMRVWVQ----------------GDGTINLESVGSEIRGVKYI-NQRF----KLDLKGNL---------SSYEKDGNTRLKGIANLEVQVELPPPFSFTPKAILESTGNGLLKSVLLTIKQRLLRQLLVDYRRW 172
BLAST of NO06G01870 vs. NCBI_GenBank
Match: WP_106257750.1 (DUF1997 domain-containing protein [Leptolyngbya frigida] >PSB26836.1 hypothetical protein C7B82_18460 [Leptolyngbya frigida ULC18]) HSP 1 Score: 72.8 bits (177), Expect = 2.100e-9 Identity = 58/208 (27.88%), Postives = 101/208 (48.56%), Query Frame = 0 Query: 101 FGTVDEVELLLWEEPALIRRYLTERPDRVLLATWDAELVDRQDRDVFRLTTKPMSFVHLSLQPSIDVRLTAAPPLSLENEVGNVGVDGGQHLLLVESLAHSMNGMEQILGQRFAESLKIDVTGKLRAVPPPLGPGGLRGPGPVRLVGEVVFVTSGQLPLLFSLTPRSVLEGAAIAINRRIMSYAKGKFVKNLAKDFDRWAASPAGAAA 309 F VE++ E+P I+ YL +P RV+ A + +++ + + FRL +P++F+ L++QP +D+R+ A DG H V+S+ + G+E I QRF K+++TG L+ P+ GG+ L G+ +P+ +LTPR LE + + ++ K + + +L D+ WA S AA Sbjct: 5 FTAFQAVEMVASEQPVPIQHYL-RQPQRVVSALAASSQIEQLESERFRLKMRPLTFMALTVQPIVDLRVWAES-------------DGTVH---VQSIGCEIRGVEYI-NQRF----KLNLTGTLQ----PIQSGGV-----TVLTGKADLEVQVDVPMPLALTPRPFLEATGNGLLKSVLLTVKQRLMHHLLADYRAWAVSKPIVAA 181
BLAST of NO06G01870 vs. NCBI_GenBank
Match: WP_015185935.1 (DUF1997 domain-containing protein [Microcoleus sp. PCC 7113] >AFZ21807.1 Protein of unknown function (DUF1997) [Microcoleus sp. PCC 7113]) HSP 1 Score: 72.4 bits (176), Expect = 2.800e-9 Identity = 56/205 (27.32%), Postives = 98/205 (47.80%), Query Frame = 0 Query: 100 EFGTVDEVELLLWEEPALIRRYLTERPDRVLLATWDAELVDRQDRDVFRLTTKPMSFVHLSLQPSIDVRLTAAPPLSLENEVGNVGVDGGQHLLLVESLAHSMNGMEQILGQRFAESLKIDVTGKLRAVPPPLGPGGLRGPGPVRLVGEVVFVTSGQLPLLFSLTPRSVLEGAAIAINRRIMSYAKGKFVKNLAKDFDRWAASPA 305 +F VE+ + EEP I+ YL +P R++ A D L+ ++ ++L +P++F+ L+ QP++ +++ A DG HL S+ + G++ I QRFA +D+ GKL V + G +L G+ + +PL FSLTPR +LE ++ + ++ K + + L D+ WA A Sbjct: 4 QFVASQSVEITVPEEPVPIQHYL-RQPQRLVHAIADPNLIKPISQERYQLQLRPLNFLSLTFQPTVTLKVWA-------------DADGTVHL---SSVGCEIRGLDYI-NQRFA----LDLKGKLYPV---------QNDGVTQLKGKADLKVNVDIPLPFSLTPRPILETTGNSLLKSVLLRIKQRLMHQLLLDYRHWANQDA 177
BLAST of NO06G01870 vs. NCBI_GenBank
Match: WP_086764075.1 (DUF1997 domain-containing protein [Nostoc sp. 106C] >OUL26326.1 hypothetical protein BV375_21700 [Nostoc sp. 106C]) HSP 1 Score: 72.4 bits (176), Expect = 2.800e-9 Identity = 52/201 (25.87%), Postives = 93/201 (46.27%), Query Frame = 0 Query: 99 MEFGTVDEVELLLWEEPALIRRYLTERPDRVLLATWDAELVDRQDRDVFRLTTKPMSFVHLSLQPSIDVRLTAAPPLSLENEVGNVGVDGGQHLLLVESLAHSMNGMEQILGQRFAESLKIDVTGKLRAVPPPLGPGGLRGPGPVRLVGEVVFVTSGQLPLLFSLTPRSVLEGAAIAINRRIMSYAKGKFVKNLAKDFDRW 300 + F VE+ + ++P I+ YL +P R++ A D + + +VFRL +P+SF+ LS+QP++D+R+ A + ++S+ + G E I QRFA +LK +++ L + RL G+ +LP FS TP+ +LE + + ++ K + + L D+ RW Sbjct: 3 IRFTASQSVEIAVPKQPIPIQHYL-RQPQRLVNALVDTNRIQQLSEEVFRLKMRPLSFMSLSIQPTVDMRVWAE----------------SNGTINLQSVGCEILGFEYI-NQRFALNLKGNLSPSLHST-------------GTRLQGKADLEVQVELPPPFSFTPKPILEATGNGLLKSVLLTVKQRLLHQLLADYRRW 172
BLAST of NO06G01870 vs. NCBI_GenBank
Match: BBD67773.1 (hypothetical protein NIES4070_41660 [Nostoc commune HK-02] >GBG21245.1 hypothetical protein NIES4072_49290 [Nostoc commune NIES-4072]) HSP 1 Score: 72.4 bits (176), Expect = 2.800e-9 Identity = 59/203 (29.06%), Postives = 93/203 (45.81%), Query Frame = 0 Query: 100 EFGTVDEVELLLWEEPALIRRYLTERPDRVLLATWDAELVDRQDRDVFRLTTKPMSFVHLSLQPSIDVRLTAAPPLSLENEVGNVGVDGGQHLLLVESLAHSMNGMEQILGQRFAESLKIDVTGKLRAVPPPLGPGGLRGPGPVRLVGEVVFVTSGQLPLLFSLTPRSVLEGAAIAINRRIMSYAKGKFVKNLAKDFDRWAAS 303 +F VE+ + E+P I+ YL +P R++ A D +++ +VFRL +P+SF+ LS+QP++D+R+ A ++ + SL + G E I QRFA +LK G L P L G RL G LP FS TP+ +LE A+ + ++ K + + L D+ W S Sbjct: 4 KFTASQSVEIAVPEQPIPIQHYL-RQPQRLVKALADNSRIEQLSEEVFRLKMRPLSFMSLSIQPTVDMRVWAE----------------SNGIINLRSLGCEILGFEYI-NQRFALNLK----GHLS--PKELSTG-------TRLQGRADLEVLVDLPPPFSFTPKPILEATGNALLKSVLLSVKQRLLNQLLADYRYWVIS 175
BLAST of NO06G01870 vs. NCBI_GenBank
Match: WP_016950606.1 (DUF1997 domain-containing protein [Anabaena sp. PCC 7108]) HSP 1 Score: 72.0 bits (175), Expect = 3.600e-9 Identity = 58/200 (29.00%), Postives = 94/200 (47.00%), Query Frame = 0 Query: 100 EFGTVDEVELLLWEEPALIRRYLTERPDRVLLATWDAELVDRQDRDVFRLTTKPMSFVHLSLQPSIDVRLTAAPPLSLENEVGNVGVDGGQHLLLVESLAHSMNGMEQILGQRFAESLKIDVTGKLRAVPPPLGPGGLRGPGPVRLVGEVVFVTSGQLPLLFSLTPRSVLEGAAIAINRRIMSYAKGKFVKNLAKDFDRW 300 +F VE+ + ++P I YL +P R++ D + + +VFRL +P++F+ LS+QP++D+R+ A Q + + SL + G E I QRFA +LK G L P LG RL G+ ++P FSLTPRS+LE + + ++ K + + +L D+ RW Sbjct: 4 KFTASQSVEIAVPKQPISIHHYL-RQPQRLVNTLADNSRIQQLSEEVFRLKMRPLAFMSLSIQPTVDMRVWA----------------DSQGTIYLRSLGCEILGFEYI-NQRFALNLK----GYLS--PYQLG-------SETRLQGKADLEVLVEIPQPFSLTPRSILETTGNGLLKSVLLTIKQRLLHHLLADYRRW 172 The following BLAST results are available for this feature:
BLAST of NO06G01870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G01870 ID=NO06G01870|Name=NO06G01870|organism=Nannochloropsis oceanica|type=gene|length=1610bpback to top protein sequence of NO06G01870.1 >NO06G01870.1-protein ID=NO06G01870.1-protein|Name=NO06G01870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=311bpback to top Synonyms
Publications
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