NO06G01600, NO06G01600 (gene) Nannochloropsis oceanica

Overview
NameNO06G01600
Unique NameNO06G01600
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2983
Alignment locationchr6:501516..504498 +

Link to JBrowse

Properties
Property NameValue
DescriptionPhosphoinositol transporter
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:501516..504498 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036273CRAL/TRIO_N_dom_sf
IPR036865CRAL-TRIO_dom_sf
IPR001251CRAL-TRIO_dom
Homology
BLAST of NO06G01600 vs. NCBI_GenBank
Match: EWM26178.1 (phosphoinositol transporter [Nannochloropsis gaditana])

HSP 1 Score: 760.4 bits (1962), Expect = 5.100e-216
Identity = 400/681 (58.74%), Postives = 484/681 (71.07%), Query Frame = 0
Query:    1 MNDTFFVLPPYKPGRGWHFRETYFRVEEAGCAKEGGREGDRQGEVVKYGEGLLLVDEEDHVMCHFRGRKYIRRKPKGTRGEMSVSFLPPHDDMLHSEIHYGDTDIRIQLATRKGIKTETTILSALRRETIDAVGGFLNCVGRGKELTFDIEHAPPRISEVSVTSTHTTTVGLQQERQQQYVHRSLHHRVHWGQTVGFVTPSCQAHTAEAHEGPIVRITLSNGSRLKITQKHMAWVEGEGGREEGGGFDGKRREAWLPTRGGMPGENVDVFVRFEQVGTMTLDPRKHF-GA--PATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPSGV-VGLFLLLDLVASPN--THHTPLSGRLCEEVHVLLALLSACILYSGLQQSLAFVRIYRHQKQQQQSCT--SLPSLLS--CSTSSLPPTLLCDRWELVVLDWRAANDDDSSLSPXXXXXXXXXXXXXFLNAEKGDVEKAQARWTKTLAWRKANNVDHILSQPHPKFDLIKKMYPQAFHYKDKQGHVCFYEILGKLQVGELLRQGVDLSDLTKHIIVQQEFLWGILQPAQTDRVTLVMDLKGVSFADVTGEVVNFAKMAVGLTSTHYPARSCRMLIVFVPGWFNLIFRFIKPMLNEDTKRKIIFLDEREIREGAMLEFIDSEFLPKEYGGTCEVPLGKSPFEVQLKGIVDAA 672
            MNDTFFVLPPY+ GRGWH RE YFRVE+A     GG+   R+GE V+YGE LLLVDEED+VMCHFRGRK+IRRKP+GT+GEMSV+ LPP +DML S++ YGDT+IR+QLATR+G+KTE   LSALRR++IDAVGGFLNC+GRG+EL FDIEHAPP ISE+++T++            + ++ RS HHRV WGQTV FVTPSCQ HTA AHEG ++R+TLSNGSRLK+ Q H  W E  G  E+  GF+ +    WLPT+ G+ GE+VD+ VR  +  T  LDPR+HF GA   AT                                P  V   LFLLL+ + +P       PL  RL       LA   AC+LY+GLQ  L   R            T  S  S L    +   LP T+L D+WEL+VLDWR    D +++SP             FL AEKGD  KA+ARW +T AWR ++ VD IL+QPHPKF LIK+ YPQAFH++DK+GHVCFYE+LG+LQVGELLRQGV LSDLT+H+I+QQEFLWG+LQP Q+DRVTLV+DLKGVS ADVTGEVVN AKMAVGLTSTHYPARSCR LI+FVPGWFNLIFRF+KPMLNEDT++KI+FLDE  +R+GAMLE+ID+EFLPKEYGGTCEVPLG+SPFE+QL+ IV+ A
Sbjct:  434 MNDTFFVLPPYQSGRGWHVREAYFRVEDAA---GGGQR--REGETVRYGEELLLVDEEDNVMCHFRGRKHIRRKPRGTKGEMSVALLPPREDMLGSDVLYGDTNIRLQLATRRGLKTEAVALSALRRDSIDAVGGFLNCLGRGQELNFDIEHAPPHISEITLTTS-------MSHGHRHFLSRSHHHRVPWGQTVSFVTPSCQDHTAAAHEGCLLRVTLSNGSRLKMRQGHCVWTE-MGEEEKDRGFEREPSGVWLPTK-GIEGEDVDLLVRLVRTETAALDPRRHFPGATLSATSAGPNFSASSRLAPLTCNALLASLARRLPRDCPLLVHAALFLLLEALLAPGGPAGPAPLLARLATRKDTALAFSLACVLYAGLQWLLRRSRPDPRAPPVPAGATPASFASSLKRPQARDGLPATMLFDKWELLVLDWRPPL-DAAAISP-AGLPSPAPVPPTFLEAEKGDEVKARARWARTQAWRASHQVDQILAQPHPKFSLIKRHYPQAFHFRDKEGHVCFYELLGRLQVGELLRQGVSLSDLTEHVILQQEFLWGVLQPEQSDRVTLVLDLKGVSLADVTGEVVNVAKMAVGLTSTHYPARSCRTLILFVPGWFNLIFRFVKPMLNEDTRKKIVFLDEGAVRQGAMLEYIDAEFLPKEYGGTCEVPLGESPFEIQLRSIVEGA 1098          
BLAST of NO06G01600 vs. NCBI_GenBank
Match: XP_008860831.1 (hypothetical protein H310_00028 [Aphanomyces invadans] >ETW09420.1 hypothetical protein H310_00028 [Aphanomyces invadans])

HSP 1 Score: 192.6 bits (488), Expect = 4.200e-45
Identity = 94/224 (41.96%), Postives = 140/224 (62.50%), Query Frame = 0
Query:  448 FLNAEKGDVEKAQARWTKTLAWRKANNVDHILSQPHPKFDLIKKMYPQAFHYKDKQGHVCFYEILGKLQVGELLRQGVDLSDLTKHIIVQQEFLWGILQPAQTDRVTLVMDLKGVSFADVTGEVVNFAKMAVGLTSTHYPARSCRMLIVFVPGWFNLIFRFIKPMLNEDTKRKIIFLDEREIREGAMLEFIDSEFLPKEYGGTCEVPLGKSPFEVQLKGIVDAA 672
            F+ AEKG+VEK +AR+  TL WR+ NNVD +L +P P F LIKK YPQ FH K  +GH  +YE +GK+ +  +   G+ +  L +H +   E++W IL+P+ + R   V+D+ G+ F D+ G+V+ F + A G  S +YP RS ++ IV VP WFN+++  + PM++  TK KI     R ++E  +L+ I  + LP +YGG+  V LG+S  EV L   VD A
Sbjct:  478 FIAAEKGNVEKGRARYESTLQWRRENNVDGMLQEPQPHFHLIKKYYPQYFHGKSIKGHCVYYEKVGKIDLKAMKAAGLTIDQLLRHYVYLTEYMWTILEPSDSGRSVTVLDVNGIGFYDLAGDVLLFVRQATGFVSANYPERSAQIFIVNVPTWFNMVWSVVSPMIDPVTKEKIRICKGRAVKE-ELLKSIAEDQLPADYGGS-SVKLGESDEEVALAKYVDQA 699          
BLAST of NO06G01600 vs. NCBI_GenBank
Match: POM78364.1 (SEC14 cytosolic factor [Phytophthora palmivora var. palmivora])

HSP 1 Score: 190.3 bits (482), Expect = 2.100e-44
Identity = 90/214 (42.06%), Postives = 134/214 (62.62%), Query Frame = 0
Query:  448 FLNAEKGDVEKAQARWTKTLAWRKANNVDHILSQPHPKFDLIKKMYPQAFHYKDKQGHVCFYEILGKLQVGELLRQGVDLSDLTKHIIVQQEFLWGILQPAQTDRVTLVMDLKGVSFADVTGEVVNFAKMAVGLTSTHYPARSCRMLIVFVPGWFNLIFRFIKPMLNEDTKRKIIFLDEREIREGAMLEFIDSEFLPKEYGGTCEVPLGKSPFE 662
            F+  EKGDVEK  AR+  TL WRK N++D+IL  PHP FD+IKK YPQ FH + + G   +YE  GK+ +  L R+G+ + DL +H +   E+LW +++P+ + R   V+D+ G+   D+ GEV++F K A   T  HYP RS  + I+ +PGWFN+I+R +KP+++  T+ K+  L    I +  +   IDSE +P ++GG   V LG S  E
Sbjct:  482 FIAGEKGDVEKGHARYLVTLEWRKENDIDNILVTPHPNFDIIKKYYPQYFHGRTRDGQPVYYERPGKIDLPALKREGLSIDDLLRHYMYMTEYLWRVVEPSDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPLIDPVTREKVHMLKGSAILK-ELETLIDSENIPSDFGGD-GVALGDSEEE 693          
BLAST of NO06G01600 vs. NCBI_GenBank
Match: XP_009521431.1 (hypothetical protein PHYSODRAFT_479932 [Phytophthora sojae] >EGZ26143.1 hypothetical protein PHYSODRAFT_479932 [Phytophthora sojae])

HSP 1 Score: 189.1 bits (479), Expect = 4.600e-44
Identity = 85/202 (42.08%), Postives = 129/202 (63.86%), Query Frame = 0
Query:  448 FLNAEKGDVEKAQARWTKTLAWRKANNVDHILSQPHPKFDLIKKMYPQAFHYKDKQGHVCFYEILGKLQVGELLRQGVDLSDLTKHIIVQQEFLWGILQPAQTDRVTLVMDLKGVSFADVTGEVVNFAKMAVGLTSTHYPARSCRMLIVFVPGWFNLIFRFIKPMLNEDTKRKIIFLDEREIREGAMLEFIDSEFLPKEYGG 650
            F+  EKGDVEK +AR+  TL WRK N++D+IL  PHP F++IKK YPQ FH K + GH  +YE  GK+ +  L R+G+ + DL +H +   E+LW +++P  + R   V+D+ G+   D+ GEV++F K A   T  HYP RS  + I+ +PGWFN+I+R +KP+++  T+ K+  L    I +  +   ID E +P ++GG
Sbjct:  485 FIAGEKGDVEKGRARYEATLQWRKENDIDNILVTPHPNFEIIKKYYPQYFHGKTRDGHPVYYERPGKIDLPALKREGLSIDDLLRHYMYMTEYLWRVVEPDDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPLIDPVTREKVHMLKGSAILK-ELETLIDMENIPSDFGG 685          
BLAST of NO06G01600 vs. NCBI_GenBank
Match: XP_009830010.1 (hypothetical protein H257_06483 [Aphanomyces astaci] >ETV80086.1 hypothetical protein H257_06483 [Aphanomyces astaci])

HSP 1 Score: 187.6 bits (475), Expect = 1.400e-43
Identity = 93/222 (41.89%), Postives = 139/222 (62.61%), Query Frame = 0
Query:  448 FLNAEKGDVEKAQARWTKTLAWRKANNVDHILSQPHPKFDLIKKMYPQAFHYKDKQGHVCFYEILGKLQVGELLRQGVDLSDLTKHIIVQQEFLWGILQPAQTDRVTLVMDLKGVSFADVTGEVVNFAKMAVGLTSTHYPARSCRMLIVFVPGWFNLIFRFIKPMLNEDTKRKIIFLDEREIREGAMLEFIDSEFLPKEYGGTCEVPLGKSPFEVQLKGIVD 670
            F+ AEKG+V+K + R+  TL WR+ N VD +L  P P F LIKK YPQ FH +  +GH  +YE +GK+ +  +   G+ +  L +H I   E++W IL+P+ + R   V+D++G+ F D+TG+V++F + A+G  S HYP RS ++ IV VP WF++++R + PM+   TK KI     R ++E  +L+ I  + LP +YGGT  V LG S  EV L   VD
Sbjct:  483 FIAAEKGNVDKGRVRYENTLQWRRENRVDGMLHIPQPHFHLIKKNYPQYFHGQSIKGHCVYYEKVGKIDLKAMKAAGLTIEQLLRHYIYLTEYMWTILEPSDSGRSVTVLDVEGIGFYDLTGDVMDFVRQAMGFVSAHYPERSAQIFIVNVPRWFDVVWRVVSPMIEPVTKEKIRICKGRAVKE-ELLKSIAEDQLPVDYGGT-GVKLGLSAEEVALAKHVD 702          
BLAST of NO06G01600 vs. NCBI_GenBank
Match: XP_024577888.1 (sec14 cytosolic [Plasmopara halstedii] >CEG41519.1 sec14 cytosolic [Plasmopara halstedii])

HSP 1 Score: 187.6 bits (475), Expect = 1.400e-43
Identity = 89/214 (41.59%), Postives = 132/214 (61.68%), Query Frame = 0
Query:  448 FLNAEKGDVEKAQARWTKTLAWRKANNVDHILSQPHPKFDLIKKMYPQAFHYKDKQGHVCFYEILGKLQVGELLRQGVDLSDLTKHIIVQQEFLWGILQPAQTDRVTLVMDLKGVSFADVTGEVVNFAKMAVGLTSTHYPARSCRMLIVFVPGWFNLIFRFIKPMLNEDTKRKIIFLDEREIREGAMLEFIDSEFLPKEYGGTCEVPLGKSPFE 662
            F+  EKGD EK +AR+  TL WRK NN+D+IL  PHP F++IK+ YPQ FH + + GH  +YE  GK+ +  L R+G+ + DL +H +   E+LW +++P    R   V+D+ G+   D+ GEV++F K A   T  HYP RS  + I+ +PGWFN+I+R +KPM++  T+ K+  L    I +  +   ID E +P ++GG   V LG S  E
Sbjct:  417 FIAGEKGDEEKGRARYLATLKWRKENNIDNILVTPHPNFEIIKRSYPQYFHGRTRDGHPVYYERPGKIDLPALKREGLSIDDLLRHYMYITEYLWRVVEPNDLGRSITVLDVSGIGMYDLGGEVLDFIKRASAFTGEHYPERSAHIFIINIPGWFNMIWRMVKPMIDPVTREKVHMLKGSAILK-ELETLIDLENIPSDFGGE-SVALGDSEEE 628          
BLAST of NO06G01600 vs. NCBI_GenBank
Match: OWZ14787.1 (SEC14 cytosolic factor [Phytophthora megakarya])

HSP 1 Score: 183.7 bits (465), Expect = 2.000e-42
Identity = 89/222 (40.09%), Postives = 135/222 (60.81%), Query Frame = 0
Query:  448 FLNAEKGDVEKAQARWTKTLAWRKANNVDHILSQPHPKFDLIKKMYPQAFHYKDKQGHVCFYEILGKLQVGELLRQGVDLSDLTKHIIVQQEFLWGILQPAQTDRVTLVMDLKGVSFADVTGEVVNFAKMAVGLTSTHYPARSCRMLIVFVPGWFNLIFRFIKPMLNEDTKRKIIFLDEREIREGAMLEFIDSEFLPKEYGGTCEVPLGKSPFEVQLKGIVD 670
            F+  EKGD EK  AR+  TL WRK N++D+IL  PHP F+ IK+ YPQ FH + ++G   +YE  GK+Q+  L R+G+ + DL +H +   E+LW +++P  + R   V+D+ G+   D+ GEV++F K A   T  HYP RS  + I+ +PGWFN+I+R +KP+++  T+ K+  L    I +  +   ID E +P ++GG   V LG S  E  L   V+
Sbjct:  485 FIAGEKGDAEKGHARFLATLEWRKENDIDNILVTPHPNFETIKQYYPQYFHGRTREGQPVYYERPGKIQLPALKREGLSIDDLLRHYMYITEYLWRVVEPNDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPLIDPVTREKVHMLKGSAILK-ELETLIDPENIPSDFGGE-GVALGDSEEEHALAAHVN 704          
BLAST of NO06G01600 vs. NCBI_GenBank
Match: ETI36009.1 (hypothetical protein F443_17767 [Phytophthora parasitica P1569] >ETM36130.1 hypothetical protein L914_17095 [Phytophthora parasitica] >ETP05829.1 hypothetical protein F441_17645 [Phytophthora parasitica CJ01A1] >ETP33936.1 hypothetical protein F442_17622 [Phytophthora parasitica P10297])

HSP 1 Score: 183.3 bits (464), Expect = 2.600e-42
Identity = 89/214 (41.59%), Postives = 131/214 (61.21%), Query Frame = 0
Query:  448 FLNAEKGDVEKAQARWTKTLAWRKANNVDHILSQPHPKFDLIKKMYPQAFHYKDKQGHVCFYEILGKLQVGELLRQGVDLSDLTKHIIVQQEFLWGILQPAQTDRVTLVMDLKGVSFADVTGEVVNFAKMAVGLTSTHYPARSCRMLIVFVPGWFNLIFRFIKPMLNEDTKRKIIFLDEREIREGAMLEFIDSEFLPKEYGGTCEVPLGKSPFE 662
            F+  EKGD EK +AR+  TL WRK NN+D+IL  PHP F+ IKK YPQ FH + + G   +YE  GK+ +  L R+G+ + DL +H +   E+LW +++P  + R   V+D+ G+   D+ GEV++F K A   T  HYP RS  + I+ +PGWFN+I+R +KPM++  T+ K+  L    I +  +   ID E +P ++GG   V LG S  E
Sbjct:  481 FIAGEKGDEEKGRARYLATLEWRKENNIDNILVTPHPNFETIKKYYPQYFHGRTRDGLPVYYERPGKIDLPALKREGLSIDDLLRHYMYITEYLWRVVEPNDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPMIDPVTREKVHMLKGSAILK-ELETLIDLENIPSDFGGE-GVALGDSEEE 692          
BLAST of NO06G01600 vs. NCBI_GenBank
Match: ETI36011.1 (hypothetical protein, variant 2 [Phytophthora parasitica P1569] >ETM36132.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETP05831.1 hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1] >ETP33938.1 hypothetical protein, variant 2 [Phytophthora parasitica P10297])

HSP 1 Score: 183.3 bits (464), Expect = 2.600e-42
Identity = 89/214 (41.59%), Postives = 131/214 (61.21%), Query Frame = 0
Query:  448 FLNAEKGDVEKAQARWTKTLAWRKANNVDHILSQPHPKFDLIKKMYPQAFHYKDKQGHVCFYEILGKLQVGELLRQGVDLSDLTKHIIVQQEFLWGILQPAQTDRVTLVMDLKGVSFADVTGEVVNFAKMAVGLTSTHYPARSCRMLIVFVPGWFNLIFRFIKPMLNEDTKRKIIFLDEREIREGAMLEFIDSEFLPKEYGGTCEVPLGKSPFE 662
            F+  EKGD EK +AR+  TL WRK NN+D+IL  PHP F+ IKK YPQ FH + + G   +YE  GK+ +  L R+G+ + DL +H +   E+LW +++P  + R   V+D+ G+   D+ GEV++F K A   T  HYP RS  + I+ +PGWFN+I+R +KPM++  T+ K+  L    I +  +   ID E +P ++GG   V LG S  E
Sbjct:  370 FIAGEKGDEEKGRARYLATLEWRKENNIDNILVTPHPNFETIKKYYPQYFHGRTRDGLPVYYERPGKIDLPALKREGLSIDDLLRHYMYITEYLWRVVEPNDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPMIDPVTREKVHMLKGSAILK-ELETLIDLENIPSDFGGE-GVALGDSEEE 581          
BLAST of NO06G01600 vs. NCBI_GenBank
Match: ETK76235.1 (hypothetical protein L915_17298 [Phytophthora parasitica] >ETL29676.1 hypothetical protein L916_17191 [Phytophthora parasitica] >ETO64742.1 hypothetical protein F444_17805 [Phytophthora parasitica P1976])

HSP 1 Score: 183.3 bits (464), Expect = 2.600e-42
Identity = 89/214 (41.59%), Postives = 131/214 (61.21%), Query Frame = 0
Query:  448 FLNAEKGDVEKAQARWTKTLAWRKANNVDHILSQPHPKFDLIKKMYPQAFHYKDKQGHVCFYEILGKLQVGELLRQGVDLSDLTKHIIVQQEFLWGILQPAQTDRVTLVMDLKGVSFADVTGEVVNFAKMAVGLTSTHYPARSCRMLIVFVPGWFNLIFRFIKPMLNEDTKRKIIFLDEREIREGAMLEFIDSEFLPKEYGGTCEVPLGKSPFE 662
            F+  EKGD EK +AR+  TL WRK NN+D+IL  PHP F+ IKK YPQ FH + + G   +YE  GK+ +  L R+G+ + DL +H +   E+LW +++P  + R   V+D+ G+   D+ GEV++F K A   T  HYP RS  + I+ +PGWFN+I+R +KPM++  T+ K+  L    I +  +   ID E +P ++GG   V LG S  E
Sbjct:  481 FIAGEKGDEEKGRARYLATLEWRKENNIDNILVTPHPNFETIKKYYPQYFHGRTRDGLPVYYERPGKIDLPALKREGLSIDDLLRHYMYITEYLWRVVEPNDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPMIDPVTREKVHMLKGSAILK-ELETLIDLENIPSDFGGE-GVALGDSEEE 692          
The following BLAST results are available for this feature:
BLAST of NO06G01600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26178.15.100e-21658.74phosphoinositol transporter [Nannochloropsis gadit... [more]
XP_008860831.14.200e-4541.96hypothetical protein H310_00028 [Aphanomyces invad... [more]
POM78364.12.100e-4442.06SEC14 cytosolic factor [Phytophthora palmivora var... [more]
XP_009521431.14.600e-4442.08hypothetical protein PHYSODRAFT_479932 [Phytophtho... [more]
XP_009830010.11.400e-4341.89hypothetical protein H257_06483 [Aphanomyces astac... [more]
XP_024577888.11.400e-4341.59sec14 cytosolic [Plasmopara halstedii] >CEG41519.1... [more]
OWZ14787.12.000e-4240.09SEC14 cytosolic factor [Phytophthora megakarya][more]
ETI36009.12.600e-4241.59hypothetical protein F443_17767 [Phytophthora para... [more]
ETI36011.12.600e-4241.59hypothetical protein, variant 2 [Phytophthora para... [more]
ETK76235.12.600e-4241.59hypothetical protein L915_17298 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000294NSK000294Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G01600.1NO06G01600.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G01600.1NO06G01600.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G01600 ID=NO06G01600|Name=NO06G01600|organism=Nannochloropsis oceanica|type=gene|length=2983bp
ATGAATGATACCTTTTTCGTGCTGCCGCCGTACAAGCCGGGGAGAGGGTG
GCATTTTCGGGAGACGTATTTCAGGGTGGAGGAGGCGGGGTGCGCGAAGG
AGGGAGGGAGGGAGGGAGACAGGCAGGGGGAGGTGGTGAAGTATGGTGAA
GGGCTGCTGCTGGTGGACGAGGAGGATCATGTGATGTGTCACTTTCGAGG
CAGGAAATACATCAGGCGGAAACCGAAGGGAACGAGGgtagggagaaagg
gagcgagggcgggagggaggaagggaggtttgtcttatctaacatctgat
ttggcgtctcctcttcagagtactcctttcagctacaaccattcctttca
ccctcttttgtctccctaacaacaacaacaacaacaacaacaacaacaac
aataacaacacagGGAGAGATGAGCGTCTCTTTCCTTCCCCCCCACGATG
ACATGCTGCACTCCGAGATCCATTACGGAGACACAGACATTCGGATCCAG
CTCGCCACCCGCAAGGGGATCAAGACTGAAACCACCATCCTGAGCGCCTT
GCGCCGGGAGACGATTGATGCCGTGGGCGGTTTTCTGAATTGTGTGGGCC
GTGGGAAGgtgagtgcaagaggaatgaggatgggaagggagggagggagg
gaagggggtagagagacctctaccgtcagtgccatacgccgggtgtcagc
tggtcctgtcggagggttccctccccagagtaggtggcccatggacattt
tcttgtcaacacctccaaccactcatgtgtacataacttatcacatcctt
cctccaccctttctcagGAACTCACCTTTGACATCGAGCACGCCCCCCCA
CGCATCTCGGAAGTCTCCGTCACCTCCACCCACACCACCACTGTCGGCCT
GCAACAAGAGCGACAGCAGCAGTACGTCCACCGCTCCCTCCACCACCGAG
TCCACTGGGGTCAGACCGTGGGGTTTGTCACCCCCTCTTGCCAAGCGCAC
ACGGCGGAAGCCCACGAGGGCCCTATTGTCCGCATCACCCTCTCGAACGG
CAGCCGCCTCAAAATAACTCAGAAGCACATGGCCTGGGTTGAAGGGGAGG
GCGGGAGGGAAGAGGGAGGAGGTTTTGATGGGAAGAGACGGGAGGCCTGG
TTGCCGACTAGAGGGGGGATGCCGGGGGAGAATGTGGATGTGTTTGTCCG
GTTTGAGCAGGTGGGGACGATGACGCTCGACCCACGAAAGCATTTCGGCG
CCCCTGCGACTGTCACTGCTGCTGCTGCTGCTGCTGCTGGAGGCATCGGC
AGCAACAGTAGCAGTGTGCTTCAAAACACTCTAATGTTGCTGCAGCACTA
TATACCCCCGAGCGGTGTCGTCGGTCTGTTCCTCCTCCTCGACCTCGTGG
CCTCCCCCAACACCCACCACACACCCCTCTCTGGTCGCCTCTGCGAAGAA
GTACACGTTCTCCTCGCTCTCCTCTCGGCCTGCATTCTCTACAGCGGTCT
ACAACAATCACTTGCTTTCGTACGAATTTATCGTCATCAGAAGCAGCAGC
AGCAGTCCTGTACCAGCCTCCCCTCACTCTTGTCCTGCTCCACGTCCTCC
CTCCCCCCCACCCTGCTGTGTGACCGCTGGGAGCTCGTCGTTCTCGACTG
GCGGGCTGCCAACGACGACGACAGCTCTCTGTCCCCTCCCCTCCCTCCCG
CCCTTCCTCCACCCCTGCCTCCCACCTTCCTGAACGCCGAAAAAGGCGAC
GTGGAGAAAGCCCAAGCTCGGTGGACCAAGACGTTGGCCTGGCGCAAGGC
CAACAACGTCGATCATATCCTTTCTCAACCACACCCTAAGTTTGATTTAA
TCAAAAAAATGTACCCACAAGCATTTCACTACAAGGACAAACAAGGGCAT
GTCTGTTTCTACGAAATCCTCGGGAAGCTCCAAGTGGGGGAGCTGCTTCG
CCAAGGGGTGGATCTCTCGGACCTGACCAAGCATATCATCGTCCAGCAGG
AGTTTTTGTGGGGCATCTTGCAGCCGGCACAGACGGATAGGGTCACATTG
GTGATGGATTTAAAGGGCGTGAGTTTCGCGGATGTCACGGGGGAAGTCGT
AAATTTTGCGAAGATGGCAGTAGGATTGACAAGCACCCATTACCCGGCTC
GGTCGTGTCGGATGTTGATTGTGTTTGTACCGGGATGGTTTAATCTGATT
TTTCGGTTTATCAAGCCCATGCTGAATGAGGACACGAAGCGGAAGATTAT
TTTTTTGGATGAGCGAGAGATAAGAGAGGGGGCCATGTTGGAATTTATTG
ACTCGGAGTTTTTGCCAAAGGAATATGGGGGGACGTGCGAGGTACCCTTG
GGAAAGAGTCCGTTTGAAGTACAGCTAAAAGGGATTGTTGATGCGGCGGG
AGCAGCAGCAGCGGTAGCAGCAGCGGCAACAGCAGCGGCAGCGGCGGCAG
CAGCAGCGACAGCAACAGCGGCAGCGGCAGCTATGGAGGGGGAAGAAGAG
GAGTCTGATTAGGAATGGGGAGGATGGGAAGATGTGTTTTTAATGTTTGT
TTTTGTGTGCTCGAATGATTGTGACAGAAAATGATAGATGTGCACATGAA
ACTCAGAGGGTGTATACTCAGTTGCCGTTGTCTAGGGGGACGAGGTAGAT
GAAGTAGAGTATATATTAGTGACATAAAAAGTAGACAGAGGAAGAGGGAT
AGAGAGCGAGAGATGACACGACAGATTTGATATGGACTGCCAATGCGTAT
GAGGGGGGACAGGCCGATGGATGGGTGCCGAGTCGAACCCCGGTCCCCCT
ATTACCCCCGCCTTGGTGATGAGAGAGGGCACAAAAGATGAATGCTTGCA
CCATATTGACCACAATCAATGTTGTTTTAACTGTGGATGTACTTTTATCA
CTATTTCGAGGACGAAGTCGAGCAAGAAAATTAGCACAGAAACCCTAGCC
TTAAATAACAAATATATAAAGACGATCCCAAAC
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protein sequence of NO06G01600.1

>NO06G01600.1-protein ID=NO06G01600.1-protein|Name=NO06G01600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=709bp
MNDTFFVLPPYKPGRGWHFRETYFRVEEAGCAKEGGREGDRQGEVVKYGE
GLLLVDEEDHVMCHFRGRKYIRRKPKGTRGEMSVSFLPPHDDMLHSEIHY
GDTDIRIQLATRKGIKTETTILSALRRETIDAVGGFLNCVGRGKELTFDI
EHAPPRISEVSVTSTHTTTVGLQQERQQQYVHRSLHHRVHWGQTVGFVTP
SCQAHTAEAHEGPIVRITLSNGSRLKITQKHMAWVEGEGGREEGGGFDGK
RREAWLPTRGGMPGENVDVFVRFEQVGTMTLDPRKHFGAPATVTAAAAAA
AGGIGSNSSSVLQNTLMLLQHYIPPSGVVGLFLLLDLVASPNTHHTPLSG
RLCEEVHVLLALLSACILYSGLQQSLAFVRIYRHQKQQQQSCTSLPSLLS
CSTSSLPPTLLCDRWELVVLDWRAANDDDSSLSPPLPPALPPPLPPTFLN
AEKGDVEKAQARWTKTLAWRKANNVDHILSQPHPKFDLIKKMYPQAFHYK
DKQGHVCFYEILGKLQVGELLRQGVDLSDLTKHIIVQQEFLWGILQPAQT
DRVTLVMDLKGVSFADVTGEVVNFAKMAVGLTSTHYPARSCRMLIVFVPG
WFNLIFRFIKPMLNEDTKRKIIFLDEREIREGAMLEFIDSEFLPKEYGGT
CEVPLGKSPFEVQLKGIVDAAGAAAAVAAAATAAAAAAAAATATAAAAAM
EGEEEESD*
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Synonyms
Publications