NO06G01520, NO06G01520 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G01520 vs. NCBI_GenBank
Match: CBN75320.1 (conserved unknown protein (Partial), partial [Ectocarpus siliculosus]) HSP 1 Score: 97.8 bits (242), Expect = 5.000e-17 Identity = 70/204 (34.31%), Postives = 95/204 (46.57%), Query Frame = 0 Query: 2 LDVVISQRNLKIFAQAVNCLARIGKDILIEADDKQFMLRALNDSKSAFSAFSFSPD-SFFEEYACGSPSPENDXXXXXXXXXXXXXRGGPVSCKLMVKPLQHVLRGVLKRVLSLRMYLNEAASTPGEGGREGIAGGREQEHIQAGAATAVKQSVEPQIILDMQCEWGVLKRHAFQLQDCEVVHAVFNREGASCLRAQANHLSQM 205 ++V I ++LK+FAQAV CL ++GK++ IE Q +LR LND+KSAF+AF F+ FFE + G GG KL +VL L +Y+ G ++EHI EP ++ M CE+G K H F LQDCE++HAVF EGAS L LSQ+ Sbjct: 54 MEVSIPHKSLKVFAQAVQCLMKVGKELFIETTGDQLILRTLNDAKSAFAAFYFNDSGGFFETFRRG------------------RRPGGNSPRKLSP-----------NKVLRLVIYVE----------------GEDEEHI------------EPHLVFQMYCEFGYRKVHRFSLQDCEIMHAVFEGEGASRLSCPPVQLSQL 200
BLAST of NO06G01520 vs. NCBI_GenBank
Match: ETI41039.1 (hypothetical protein F443_13681 [Phytophthora parasitica P1569] >ETO69736.1 hypothetical protein F444_13744 [Phytophthora parasitica P1976] >ETP10835.1 hypothetical protein F441_13610 [Phytophthora parasitica CJ01A1] >ETP38977.1 hypothetical protein F442_13545 [Phytophthora parasitica P10297]) HSP 1 Score: 77.8 bits (190), Expect = 5.400e-11 Identity = 57/215 (26.51%), Postives = 103/215 (47.91%), Query Frame = 0 Query: 6 ISQRNLKIFAQAVNCLARIGKDILIEADD--KQFMLRALNDSKSAFSAFSFSPDSFFEEYACGSPSPENDXXXXXXXXXXXXXRGGPVSCKLMVKPLQHVLRGVLKRVLSLRMYL--NEAASTPGEGGREGIAGGREQEHIQAGAATAVKQSVEPQIILDMQCEWGVLKRHAFQLQDCEVVHAVFNREGA-SCLRAQANHLSQMLDHVQGAAEVA 216 I++ LK+F A+ CLA++GK++ IE D ++ LRALND+ SA F E AC D R V CK+ K +V R LK V S+++ L ++ A +E ++ E + + ++ ++C++ + K H ++Q C+++ AVF+++ + R + +HLS +L H+ ++EV+ Sbjct: 7 IAEEALKVFVAALQCLAQVGKELSIECDPRARRLTLRALNDAHSASGQVILDRTFFSESQACSVTLQGVDVASIETLKARFNGRTPFVKCKVFAKSCCNVFR-TLKHVQSVQLALLVDQEALEQAGASQEDVSQSSEVDEVDLDCM---------ELRWRLRCDFDITKTHHMKVQSCQIMRAVFDKDACPNRWRTRQHHLSSLLAHIHHSSEVS 211
BLAST of NO06G01520 vs. NCBI_GenBank
Match: ETK81148.1 (hypothetical protein L915_13352 [Phytophthora parasitica]) HSP 1 Score: 77.8 bits (190), Expect = 5.400e-11 Identity = 57/215 (26.51%), Postives = 103/215 (47.91%), Query Frame = 0 Query: 6 ISQRNLKIFAQAVNCLARIGKDILIEADD--KQFMLRALNDSKSAFSAFSFSPDSFFEEYACGSPSPENDXXXXXXXXXXXXXRGGPVSCKLMVKPLQHVLRGVLKRVLSLRMYL--NEAASTPGEGGREGIAGGREQEHIQAGAATAVKQSVEPQIILDMQCEWGVLKRHAFQLQDCEVVHAVFNREGA-SCLRAQANHLSQMLDHVQGAAEVA 216 I++ LK+F A+ CLA++GK++ IE D ++ LRALND+ SA F E AC D R V CK+ K +V R LK V S+++ L ++ A +E ++ E + + ++ ++C++ + K H ++Q C+++ AVF+++ + R + +HLS +L H+ ++EV+ Sbjct: 7 IAEEALKVFVAALQCLAQVGKELSIECDPRARRLTLRALNDAHSASGQVILDRTFFSESQACSVTLQGVDVASIETLKARFNGRTPFVKCKVFAKSCCNVFR-TLKHVQSVQLALLVDQEALEQAGASQEDVSQSSEVDEVDLDCM---------ELRWRLRCDFDITKTHHMKVQSCQIMRAVFDKDACPNRWRTRQHHLSSLLAHIHHSSEVS 211
BLAST of NO06G01520 vs. NCBI_GenBank
Match: ETL34561.1 (hypothetical protein L916_13233 [Phytophthora parasitica] >ETL87823.1 hypothetical protein L917_13058 [Phytophthora parasitica] >ETM41068.1 hypothetical protein L914_13146 [Phytophthora parasitica]) HSP 1 Score: 77.8 bits (190), Expect = 5.400e-11 Identity = 57/215 (26.51%), Postives = 103/215 (47.91%), Query Frame = 0 Query: 6 ISQRNLKIFAQAVNCLARIGKDILIEADD--KQFMLRALNDSKSAFSAFSFSPDSFFEEYACGSPSPENDXXXXXXXXXXXXXRGGPVSCKLMVKPLQHVLRGVLKRVLSLRMYL--NEAASTPGEGGREGIAGGREQEHIQAGAATAVKQSVEPQIILDMQCEWGVLKRHAFQLQDCEVVHAVFNREGA-SCLRAQANHLSQMLDHVQGAAEVA 216 I++ LK+F A+ CLA++GK++ IE D ++ LRALND+ SA F E AC D R V CK+ K +V R LK V S+++ L ++ A +E ++ E + + ++ ++C++ + K H ++Q C+++ AVF+++ + R + +HLS +L H+ ++EV+ Sbjct: 7 IAEEALKVFVAALQCLAQVGKELSIECDPRARRLTLRALNDAHSASGQVILDRTFFSESQACSVTLQGVDVASIETLKARFNGRTPFVKCKVFAKSCCNVFR-TLKHVQSVQLALLVDQEALEQAGASQEDVSQSSEVDEVDLDCM---------ELRWRLRCDFDITKTHHMKVQSCQIMRAVFDKDACPNRWRTRQHHLSSLLAHIHHSSEVS 211
BLAST of NO06G01520 vs. NCBI_GenBank
Match: KUG00470.1 (Cell cycle checkpoint control protein RAD9A [Phytophthora nicotianae]) HSP 1 Score: 77.8 bits (190), Expect = 5.400e-11 Identity = 57/215 (26.51%), Postives = 103/215 (47.91%), Query Frame = 0 Query: 6 ISQRNLKIFAQAVNCLARIGKDILIEADD--KQFMLRALNDSKSAFSAFSFSPDSFFEEYACGSPSPENDXXXXXXXXXXXXXRGGPVSCKLMVKPLQHVLRGVLKRVLSLRMYL--NEAASTPGEGGREGIAGGREQEHIQAGAATAVKQSVEPQIILDMQCEWGVLKRHAFQLQDCEVVHAVFNREGA-SCLRAQANHLSQMLDHVQGAAEVA 216 I++ LK+F A+ CLA++GK++ IE D ++ LRALND+ SA F E AC D R V CK+ K +V R LK V S+++ L ++ A +E ++ E + + ++ ++C++ + K H ++Q C+++ AVF+++ + R + +HLS +L H+ ++EV+ Sbjct: 7 IAEEALKVFVAALQCLAQVGKELSIECDPRARRLTLRALNDAHSASGQVILDRTFFSESQACSVTLQGVDVASIETLKARFNGRTPFVKCKVFAKSCCNVFR-TLKHVQSVQLALLVDQEALEQAGASQEDVSQSSEVDEVDLDCM---------ELRWRLRCDFDITKTHHMKVQSCQIMRAVFDKDACPNRWRTRQHHLSSLLAHIHHSSEVS 211
BLAST of NO06G01520 vs. NCBI_GenBank
Match: XP_008894567.1 (hypothetical protein PPTG_03634 [Phytophthora parasitica INRA-310] >ETN20692.1 hypothetical protein PPTG_03634 [Phytophthora parasitica INRA-310]) HSP 1 Score: 76.3 bits (186), Expect = 1.600e-10 Identity = 56/215 (26.05%), Postives = 102/215 (47.44%), Query Frame = 0 Query: 6 ISQRNLKIFAQAVNCLARIGKDILIEADD--KQFMLRALNDSKSAFSAFSFSPDSFFEEYACGSPSPENDXXXXXXXXXXXXXRGGPVSCKLMVKPLQHVLRGVLKRVLSLRMYL--NEAASTPGEGGREGIAGGREQEHIQAGAATAVKQSVEPQIILDMQCEWGVLKRHAFQLQDCEVVHAVFNREGA-SCLRAQANHLSQMLDHVQGAAEVA 216 I++ LK+F A+ CLA++GK++ IE D ++ LRALND+ SA F E AC D R V CK+ K +V R LK V S+++ L ++ A +E ++ E + + ++ ++C++ + K H ++Q C+++ AVF+++ + R + +HL +L H+ ++EV+ Sbjct: 7 IAEEALKVFVAALQCLAQVGKELSIECDPRARRLTLRALNDAHSASGQVILDRTFFSESQACSVTLQGVDVASIETLKARFNGRTPFVKCKVFAKSCCNVFR-TLKHVQSVQLALLVDQEALEQAGASQEDVSQSSEVDEVDLDCM---------ELRWRLRCDFDITKTHHMKVQSCQIMRAVFDKDACPNRWRTRQHHLGSLLAHIHHSSEVS 211
BLAST of NO06G01520 vs. NCBI_GenBank
Match: KUF93322.1 (hypothetical protein AM588_10006743 [Phytophthora nicotianae]) HSP 1 Score: 75.9 bits (185), Expect = 2.000e-10 Identity = 56/213 (26.29%), Postives = 101/213 (47.42%), Query Frame = 0 Query: 6 ISQRNLKIFAQAVNCLARIGKDILIEADD--KQFMLRALNDSKSAFSAFSFSPDSFFEEYACGSPSPENDXXXXXXXXXXXXXRGGPVSCKLMVKPLQHVLRGVLKRVLSLRMYL--NEAASTPGEGGREGIAGGREQEHIQAGAATAVKQSVEPQIILDMQCEWGVLKRHAFQLQDCEVVHAVFNREGA-SCLRAQANHLSQMLDHVQGAAE 214 I++ LK+F A+ CLA++GK++ IE D ++ LRALND+ SA F E AC D R V CK+ K +V R LK V S+++ L ++ A +E ++ E + + ++ ++C++ + K H ++Q C+++ AVF+++ + R + +HLS +L H+ ++E Sbjct: 7 IAEEALKVFVAALQCLAQVGKELSIECDPRARRLTLRALNDAHSASGQVILDRTFFSESQACSVTLQGVDVASIETLKARFNGRTPFVKCKVFAKSCCNVFR-TLKHVQSVQLALLVDQEALEQAGASQEDVSQSSEVDEVDLDCM---------ELRWRLRCDFDITKTHHMKVQSCQIMRAVFDKDACPNRWRTRQHHLSSLLAHIHHSSE 209
BLAST of NO06G01520 vs. NCBI_GenBank
Match: XP_002903571.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY55347.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 75.1 bits (183), Expect = 3.500e-10 Identity = 55/215 (25.58%), Postives = 103/215 (47.91%), Query Frame = 0 Query: 6 ISQRNLKIFAQAVNCLARIGKDILIEADD--KQFMLRALNDSKSAFSAFSFSPDSFFEEYACGSPSPENDXXXXXXXXXXXXXRGGPVSCKLMVKPLQHVLRGVLKRVLSLRMYL--NEAASTPGEGGREGIAGGREQEHIQAGAATAVKQSVEPQIILDMQCEWGVLKRHAFQLQDCEVVHAVFNREGA-SCLRAQANHLSQMLDHVQGAAEVA 216 I++ LK+F A+ CLA++GK++ IE D ++ LRALND+ SA F E C D R + CK+ K +V R LK V S+++ L ++ A + +E ++ E + + ++ ++C++ + K H ++Q C+++ AVF+++ + R + +HLS +L H+ ++EV+ Sbjct: 7 IAEEALKVFVAALQCLAQVGKELSIECDPCARRLTLRALNDAHSASGQVMLDRTFFSESQNCCVTLQGVDITSTQTIKTRFNGRTPFIKCKVFAKSCCNVFR-TLKHVQSVQLTLLVDQEALEQADASQEDVSQSSEVDEVDLDCM---------ELRWRLRCDFDITKTHHMKVQACQIMRAVFDKDACPNRWRTRQHHLSSLLAHIHHSSEVS 211
BLAST of NO06G01520 vs. NCBI_GenBank
Match: OPJ74098.1 (cell cycle checkpoint control protein RAD9A [Patagioenas fasciata monilis]) HSP 1 Score: 73.6 bits (179), Expect = 1.000e-9 Identity = 62/227 (27.31%), Postives = 105/227 (46.26%), Query Frame = 0 Query: 5 VISQRNLKIFAQAVNCLARIGKDILIEADDKQFMLRALNDSKSAFSAFSFSPDSFFEEYACGSPSPENDXXXXXXXXXXXXXRGGPVSCKLMVKPLQHVLRGVLKRVLSLRMYLNEAASTPGEGGREGIAGGREQEHIQAGAATAVKQSVEPQIILDMQCEWGVLKRHAFQLQDCEVVHAVFNREG-ASCLRAQANHLSQMLDHV-QGAAEVAFVAGKEG-ICLRTW 229 +++ N+K+ +AV+ L+RIG ++ +E + LRA+N S+SAF++F F+P FF+ Y G P+ + V CK+++K GV + + SL G + + ++++ + C++GV K H Q+CE++ AVF+ + AS L A A L++ + H Q AEV AG G I LR + Sbjct: 4 IVTGGNVKVLGRAVHSLSRIGDELYLEPTESGLSLRAVNSSRSAFASFLFAP-LFFQLYEPGGRQPDREL----------------VRCKVLMKS----FLGVFRSLPSLEK--------------------------TVGKCLILLKPRANRLVVQLHCKYGVTKTHNLAFQECELLQAVFDTQRCASTLCAPARLLAEAVVHFPQTLAEVTLGAGPGGKISLRNY 183
BLAST of NO06G01520 vs. NCBI_GenBank
Match: XP_005280585.1 (cell cycle checkpoint control protein RAD9A isoform X1 [Chrysemys picta bellii] >XP_005280586.1 cell cycle checkpoint control protein RAD9A isoform X1 [Chrysemys picta bellii] >XP_005280587.1 cell cycle checkpoint control protein RAD9A isoform X1 [Chrysemys picta bellii]) HSP 1 Score: 73.2 bits (178), Expect = 1.300e-9 Identity = 65/239 (27.20%), Postives = 105/239 (43.93%), Query Frame = 0 Query: 5 VISQRNLKIFAQAVNCLARIGKDILIEADDKQFMLRALNDSKSAFSAFSFSPDSFFEEYACGSPSPENDXXXXXXXXXXXXXRGGPVSCKLMVKPLQHVLR---GVLKRVLSLRMYLNEAASTPGEGGREGIAGGREQEHIQAGAATAVKQSVEPQIILDMQCEWGVLKRHAFQLQDCEVVHAVFNRE-GASCLRAQANHLSQMLDHVQ-GAAEVAFVAGKEG-ICLRTWRGGEEEGGR 238 +++ N+K+ +AV+ L+RIG ++ ++ + LRA+N S+SA++ F F+P FF+ Y GSP P+ G P CK+ +K V R + K V + LN AS ++++ + C++GV K H Q+CE++ AVF++E A+ LRA A L + H AEV G + R + E E R Sbjct: 4 LVTGGNVKVLGKAVHSLSRIGDELYVDPTEDGLSLRAVNSSRSAYACFLFAP-LFFQLYEEGSPDPD----------------GEPFRCKVFMKSFLGVFRSLPSLEKMVEKCLISLNPRAS---------------------------------RLVVQLHCKYGVTKTHNLSFQECELLQAVFDKELCANTLRAPARVLVDAVVHFPVTLAEVTLGVSPAGKVSFRNYLDEETEPSR 192 The following BLAST results are available for this feature:
BLAST of NO06G01520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G01520 ID=NO06G01520|Name=NO06G01520|organism=Nannochloropsis oceanica|type=gene|length=959bpback to top protein sequence of NO06G01520.1 >NO06G01520.1-protein ID=NO06G01520.1-protein|Name=NO06G01520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=253bpback to top Synonyms
Publications
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