NO06G01450, NO06G01450 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO06G01450
Unique Name	NO06G01450
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	5375
Alignment location	chr6:461006..466380 +

Link to JBrowse

Properties


Property Name	Value
Description	Atp-dependent rna helicase ddx1

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr6	genome	chr6:461006..466380 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0005524	ATP binding
GO:0005515	protein binding
GO:0016787	hydrolase activity
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR013320	ConA-like_dom
IPR014014	RNA_helicase_DEAD_Q_motif
IPR001870	B30.2/SPRY
IPR011545	DEAD/DEAH_box_helicase_dom
IPR001650	Helicase_C
IPR014001	Helicase_ATP-bd
IPR003877	SPRY_dom

Homology

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BLAST of NO06G01450 vs. NCBI_GenBank
Match: EWM26192.1 (atp-dependent rna helicase ddx1 [Nannochloropsis gaditana])

HSP 1 Score: 1080.9 bits (2794), Expect = 0.000e+0
Identity = 541/778 (69.54%), Postives = 613/778 (78.79%), Query Frame = 0

Query:    1 MAGGFESLGLGEELIQAVEGDLNWLLPTDVQDEAIPLILGGGDVMAAAETGSGKTAAFSLPVLQLVMETKRREAEGKDGPAGGAVAGRAKSATDWRLSGVDRDGMLGIEGADGGIAFAGAPRWVGGRATLGVSKGKAYYEATLLD---QGLGRVGWSTTAANYILGTDKYGLGFGGTGMKSQGGKFDPYGESFGQGDVIGCFLDLEKGVLGFSKNGKYLGDAFVLEGELKGQEAWFPAVALKQARMRLALVGPFRHAPPQEEGFQGVAQLPAESVHIPVFAKGSAEVVGGSGGTGVEKSSSGSNRPLAIIIEPARDLAEQVYNCICDYSRHVEGVGVALVVGGVEQRETKTGIKAGCDIVVGTTGKLMDLIKRGLLNVDRVRFFILDEADRLLETGNRDDIMTLYHRLPKGGVGDRRLQICFFSATLHSPEITELAEKICDRPTWVDLKGKDSVPESVHHVVVEVDPEAQAFQALLASSPDASSVHVATDNVHSXXXXXXXXXXXXXXXXXXXXXXXXXXLKLIEAYNMDQCLIFCRTNLDCDLLETFLVGVGGGQHFRGKTEKGKENVYSCCVLAGMRSMQERRANLQAFKDGDVRFLICTDVAARGIDIQGLPYVINMTLPDVVENYIHRVGRVGRADSIGLAISLVAKQGFSEKVWYHSCASRGKGCVNRKVKEEGGCTIWFDEADSLRQVEERLHCSDGIPRMGPPEFTLPKTIEALLGGGKFGEASKNHVVNETVAKHVELLQPSVKELVDLEFKSQTLWLSLRQRYRAGVHG 776
            MAGGFESLGLGEELIQA+EGDLNWLLPTDVQDEAIPLILGGGDVMAAAETGSGKTAAF+LPVLQLVMETKRREA GK   +G    G AK+  DWRLSGVDRDGMLGIEG DG  AF    RWVGGR+TLGV KGKAY+EATLL+   QG+GRVGWST  ANY LGTDKYG G+GGTG KS  G+F+ YGE F +GDVIG FLDLEKG++GFSKNG YLGDAFV+E  LKG  AWFPAVALK+AR+++   GPFRH  P E GF GVA+LP + V  P F+K SA                    P AIIIEPARDLAEQVY+CICDYSRHVEGV +ALV+GG +QRETK G+++GCDIVVGT GKLMD +KRGLLN+DR RF ILDEADR LE G R D+MT+Y RLPKGGVGD+RLQ+CFFSATLHSPEITELA+ ICDRPTWVDLKGKDSVPE+VHHVVVE+DPE  A Q LL  +   ++ HV TDNVH+                          LK+IEAY+M+QC+IFCRTNLDC+ LE FL   GGGQ F+GK EKGKEN+YSCCVLAGMRSM ERR NLQAFK+GDVRFLICTDVAARGIDIQ LP+VIN TLPD VENYIHRVGRVGRAD +GLAISLVA  G+ EKVWYH+C ++GKGC NR+V ++GGCT+WFDE D LRQVE RLH ++ IPR+ PP F LP  I++ LGG K+GEA    VVNETVAKHV LL+P+V+EL+DLE ++QT WLSLRQRY  G  G
Sbjct:    1 MAGGFESLGLGEELIQAIEGDLNWLLPTDVQDEAIPLILGGGDVMAAAETGSGKTAAFALPVLQLVMETKRREAGGK---SGTTCEGEAKNERDWRLSGVDRDGMLGIEGVDGSQAFVTTSRWVGGRSTLGVCKGKAYFEATLLEEGNQGVGRVGWSTARANYNLGTDKYGFGYGGTGKKSHEGRFETYGEIFKKGDVIGSFLDLEKGIVGFSKNGAYLGDAFVMEESLKGL-AWFPAVALKEARIQMNFTGPFRHPVPTERGFLGVAELPLDGVLKPDFSKHSASXXXXXXXXXXXXXXXS---PFAIIIEPARDLAEQVYSCICDYSRHVEGVDIALVMGGNDQRETKAGLRSGCDIVVGTIGKLMDFMKRGLLNMDRARFLILDEADRFLEAGERADVMTIYQRLPKGGVGDQRLQVCFFSATLHSPEITELAKAICDRPTWVDLKGKDSVPEAVHHVVVEMDPENSALQTLLHPTSSPAAQHVVTDNVHAASSLSQDPEEVERRSDMIKRLKPLVLLKIIEAYDMEQCIIFCRTNLDCNNLEQFLNFAGGGQMFKGKVEKGKENIYSCCVLAGMRSMDERRRNLQAFKEGDVRFLICTDVAARGIDIQNLPFVINYTLPDAVENYIHRVGRVGRADCLGLAISLVAASGYQEKVWYHTCTNKGKGCSNREVTDKGGCTVWFDEYDMLRQVEARLH-TETIPRLVPPNFALPPAIKSSLGGAKYGEAVSKQVVNETVAKHVALLRPAVQELIDLEQRAQTTWLSLRQRYGGGRAG 770

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BLAST of NO06G01450 vs. NCBI_GenBank
Match: PRW60433.1 (ATP-dependent RNA helicase DDX1 [Chlorella sorokiniana])

HSP 1 Score: 648.3 bits (1671), Expect = 3.100e-182
Identity = 373/786 (47.46%), Postives = 486/786 (61.83%), Query Frame = 0

Query:    5 FESLGLGEELIQAVEGDLNWLLPTDVQDEAIPLILGGGDVMAAAETGSGKTAAFSLPVLQLVMETKR-REAEGKDGPAGGAVAGRAKSATDWRLSGVDRDGMLGIEGADGGIAFAGAPRWVGGRATLGVSKGKAYYEATLLDQGLGRVGWSTTAANYILGTDKYGLGFGGTGMKSQGGKFDPYGESFGQGDVIGCFLDLEKGVLGFSKNGKYLGDAFVLEGELKGQEAWFPAVALKQARMRLAL-VGPFRHAPPQEEGFQGVAQLPAESVHIPVFAKGSAEVVGGSGGTGVEKSSSGSNRPLAIIIEPARDLAEQVYNCICDYSRHVEGVGV--ALVVGGVEQRETKTGIKAGCDIVVGTTGKLMDLIKRGLLNVDRVRFFILDEADRLLETGNRDDIMTLYHRLPKGGVGDRRLQICFFSATLHSPEITELAEKICDRPTWVDLKGKDSVPESVHHVVVEVDPEAQAFQALLASSPDASSVHVATDNVHSXXXXXXXXXXXXXXXXXXXXXXXXXXL-KLIEAYNMDQCLIFCRTNLDCDLLETFLVGVGGGQ-HFRGKTEKGKENVYSCCVLAGMRSMQERRANLQAFKDGDVRFLICTDVAARGIDIQGLPYVINMTLPDVVENYIHRVGRVGRADSIGLAISLVAKQGFSEKVWYHSCASRG------KGCVNRKVKEEGGCTIWFDEADSLRQVEERLHCSDGIPRMGPPEFTLPKTIEALLGGGKFGEA-------SKNHVVNETVAKHVELLQPSVKELVDLEFKSQTLWLSLRQRYRA 772
            FE +G+  ELI+AVE +L W LPT +Q E +PLILGGGD+MAAAETGSGKT AF+LPVLQ+V E  R R+   ++ PAGG   G A +     L+  DRD ++ I              W G R T+G   G+ YYEAT+ D+GL RVGWST AA+  LGTD++  GFGGTG KS    FD YGE +G  D +GC LD + G + F+KNG+ LG AF L   L+GQ A +PA+ LK A + +     PF+H PP   GF G+A +P  +                +       SS    +PLAII+EPARDLAEQ +N    + + +    +   L VGG   +     ++ G DIVVGT G++MD I+ G L  D+V+FF+LDEADRLL+TGN++ IM ++ R P+ G G  RLQ+  FSATLHSPE+  LA+KIC  P  +DLKGKD+VPE+V HV+V  DP  Q  ++ L S+P+     V TDN+H+                          L ++I+A+ MDQCLIFCRTN DCD LE FL  +GGG   FRGK E GKEN YSCCVLAG RSM ERRA L+AFK+GDVRFLICTDVAARGIDIQGLPYVINMTLPD  E+YIHRVGRVGRAD++GLAISLV+     EKVWY  C  +G          N +  E+GG TIW+DE   L+ VE+RL  +  IP +   + +LP  I A + G + G          +   V++ V + V+ ++P+V+EL  LE ++QT +  L++++ A
Sbjct:  194 FEEVGVAPELIRAVE-ELGWTLPTPIQAECVPLILGGGDIMAAAETGSGKTGAFALPVLQIVHEAIRTRQRSRQNAPAGGGNGG-ADAPPACVLNAEDRDSVVAISPDGLRCQARSEQAWGGVRGTVGAFGGRVYYEATVSDEGLCRVGWSTQAASLDLGTDRHSFGFGGTGKKSHNRSFDSYGEPYGLNDTVGCLLDCQGGSIAFTKNGQQLGPAFQLPQYLQGQ-ALYPAICLKNAELAVNFGATPFKHGPP--PGFVGLASVPRSAT---------------ASWQDTPSSSGADRKPLAIILEPARDLAEQTHNNFTAFRKFLTDPALRNELFVGGTNPQAQVRALQEGLDIVVGTPGRVMDFIETGKLPCDQVKFFVLDEADRLLDTGNQELIMKMFRRFPQAGAGVSRLQVLLFSATLHSPEVRALADKICQNPIIIDLKGKDAVPETVDHVLVRCDP--QEDRSWLQSNPE-----VFTDNIHALDRTGQPNLDTRENWSEAVKRLKQRYLQRIIDAFQMDQCLIFCRTNFDCDNLEKFLNSLGGGAGGFRGKRETGKENPYSCCVLAGARSMDERRAALEAFKEGDVRFLICTDVAARGIDIQGLPYVINMTLPDRSEDYIHRVGRVGRADTMGLAISLVS--SVPEKVWY--CTVKGIKPWLAPDAKNTRTNEQGGHTIWYDEPQLLQDVEKRL--TRPIPALA-ADLSLPSEIAARVAGTQAGSGGAAQYGQQRGGGVSKDVMERVQAVRPAVQELARLEHQAQTSFFQLKRKWAA 945

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BLAST of NO06G01450 vs. NCBI_GenBank
Match: PSC75014.1 (ATP-dependent RNA helicase DDX1 [Micractinium conductrix])

HSP 1 Score: 644.0 bits (1660), Expect = 5.800e-181
Identity = 373/783 (47.64%), Postives = 481/783 (61.43%), Query Frame = 0

Query:    5 FESLGLGEELIQAVEGDLNWLLPTDVQDEAIPLILGGGDVMAAAETGSGKTAAFSLPVLQLVMETKRREAEGKDGPAGGAVAGRAKSATDWRLSGVDRDGMLGIEGADGGIAFAGAPRWVGGRATLGVSKGKAYYEATLLDQGLGRVGWSTTAANYILGTDKYGLGFGGTGMKSQGGKFDPYGESFGQGDVIGCFLDLEKGVLGFSKNGKYLGDAFVLEGELKGQEAWFPAVALKQARMRLALVG-PFRHAPPQEEGFQGVAQLPAESVHIPVFAKGSAEVVGGSGGTGVEKSSSGSNRPLAIIIEPARDLAEQVYNCICDYSRHVEGVGV--ALVVGGVEQRETKTGIKAGCDIVVGTTGKLMDLIKRGLLNVDRVRFFILDEADRLLETGNRDDIMTLYHRLPKGGVGDRRLQICFFSATLHSPEITELAEKICDRPTWVDLKGKDSVPESVHHVVVEVDPEAQAFQALLASSPDASSVHVATDNVHSXXXXXXXXXXXXXXXXXXXXXXXXXXLKLIEAYNMDQCLIFCRTNLDCDLLETFLVGVGGGQ--HFRGKTEKGKENVYSCCVLAGMRSMQERRANLQAFKDGDVRFLICTDVAARGIDIQGLPYVINMTLPDVVENYIHRVGRVGRADSIGLAISLVAKQGFSEKVWYHSCASRG------KGCVNRKVKEEGGCTIWFDEADSLRQVEERLHCSDGIPRMGPPEFTLPKTIEALLGGGKFGE-----ASKNHVVNETVAKHVELLQPSVKELVDLEFKSQTLWLSLRQRYRA 772
            FE  G+  ELI AV+ +L W LPT +Q EA+PLILGGGDVMAAAETGSGKT AF+LPVLQ+V E  R     +    GG  A  A+ +    L+  DRD +  I G            W G R T+G   G+ YYEAT+ D+GL RVGWST AA+  LGTDK+G G+GGTG KS   +F+ YGE +G  D +GC LD + G + ++KNG  LG AF L   ++GQ A++PAV LK A +++   G PF+HAPP   G+ G+A  P  +                S       S     +PLAII+EPARDLAEQ +N I  + +H+    +   L+VGG         +K G DIVVGT G++MD ++ G L  D+V+FF+LDEADRLL+TGN++ IM ++ R PKGG G  RLQ+  FSATLHSPE+  LA KIC  P  +DLKGKD+VPE+VHHV+V  DP  Q  ++ L S+P   +VH  TD VH+                           ++++A+ M+QCLIFCRTN DCD LE FL  +GGG    FRGK E G E+ YSC VLAG RSM ERRA LQAFKDGDVRFLICTDVAARGIDIQGLPYVINMTLPD  E+YIHRVGRVGRAD++GLAISLV+     EKVW+  C  +G          N +  EEGG T W+DE   L+ +E+RL  S  I  +   + +LP  I A + GG  G        +   V++ VA+ V  ++P+V+ L  LEF +Q+ +  L++++ A
Sbjct:    4 FEEAGVAPELISAVD-ELGWTLPTPIQAEAVPLILGGGDVMAAAETGSGKTGAFALPVLQIVHEALRTRQAARQAGGGGGTAPSAQRSL-CVLNAEDRDAVFAISGDGLRCQARSEQAWGGCRGTVGAFSGRVYYEATVSDEGLCRVGWSTQAASLDLGTDKHGFGYGGTGKKSHVRQFEDYGEPYGLNDTVGCLLDSDGGTISYTKNGALLGPAFQLPQHMRGQ-AFYPAVCLKNAELQVNFGGSPFKHAPP--PGYGGLASAPRSTT--------------ASWQEAPAGSXXXXXKPLAIILEPARDLAEQTHNNITLFRKHLRDPSIRNELLVGGTAAAAQLRALKEGVDIVVGTPGRVMDFMETGKLPTDQVQFFVLDEADRLLDTGNQEVIMKMFQRFPKGGSGVARLQVLLFSATLHSPEVRALAGKICQNPIIIDLKGKDAVPEAVHHVLVRCDP--QEDRSWLQSAP---AVH--TDAVHALDQTGPNLDTPENWSEAVKRLKQRYLQRVLDAFQMEQCLIFCRTNFDCDNLELFLNSLGGGSGGGFRGKRESGVESRYSCVVLAGARSMDERRAALQAFKDGDVRFLICTDVAARGIDIQGLPYVINMTLPDRSEDYIHRVGRVGRADTMGLAISLVS--SVPEKVWF--CTQKGYKPWLQPDAHNTRTNEEGGQTTWYDEPQLLQDIEKRL--SRPIAAL-DADLSLPADIAAHVAGGGGGSEVQYGQQRGGGVSKEVAERVAAVRPAVQGLARLEFAAQSSFYELKRKWAA 753

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BLAST of NO06G01450 vs. NCBI_GenBank
Match: XP_009907774.1 (PREDICTED: ATP-dependent RNA helicase DDX1 [Picoides pubescens])

HSP 1 Score: 614.8 bits (1584), Expect = 3.800e-172
Identity = 351/768 (45.70%), Postives = 477/768 (62.11%), Query Frame = 0

Query:    5 FESLGLGEELIQAVEGDLNWLLPTDVQDEAIPLILGGGDVMAAAETGSGKTAAFSLPVLQLVMETKRREAEGKDGPA----GGAVAGRAKSATDWRLSGVDRDGMLGIEGADGGIAFA-GAPRWVGGRATLGVSKGKAYYEATLLDQGLGRVGWSTTAANYILGTDKYGLGFGGTGMKSQGGKFDPYGESFGQGDVIGCFLDLEKGVLGFSKNGKYLGDAFVLEGELKGQEAWFPAVALKQARMRLALVGPFRHAPPQEEGFQGVAQLPAESVHIPVFAKGSAEVVGGSGGTGVEKSSSGSNRPLAIIIEPARDLAEQVYNCICDYSRHVEG--VGVALVVGGVEQRETKTGIKAGCDIVVGTTGKLMDLIKRGLLNVDRVRFFILDEADRLLETGNRDDIMTLYHRLPKGGVGDRRLQICFFSATLHSPEITELAEKICDRPTWVDLKGKDSVPESVHHVVVEVDPEAQAFQALLASSPDASSVHVATDNVHSXXXXXXXXXXXXXXXXXXXXXXXXXXLKLIEAYNMDQCLIFCRTNLDCDLLETFLVGVGGGQHFRGKTEKGKENVYSCCVLAGMRSMQERRANLQAFKDGDVRFLICTDVAARGIDIQGLPYVINMTLPDVVENYIHRVGRVGRADSIGLAISLVAKQGFSEKVWYHSCASRGKGCVNRKVKEEGGCTIWFDEADSLRQVEERLHCSDGIPRMGPPEFTLPKTIEALLGGGKFGEASKNHVVNETVAKHVELLQPSVKELVDLEFKSQTLWLSL 766
            F  +G+  E+ QAVE +++WLLPTD+Q E+IPLILGGGDV+ AAETGSGKT AFS+PV+Q+V ET + + EGK G A    GGAV  +      W+++  DR     I G+DG    +     W G RAT GV+KGK YYE +  DQGL RVGWST  A+  LGTDK+G GFGGTG KS   +FD YGE F   D IGC+LD++KG + FSKNGK LG AF +   +K Q A F A  LK A ++    G      P ++G+ G+ + P  SV +     GSA+VV         ++ +  N P A+I+EP+R+LAEQ  N +  + ++V+   +   L++GGV  R+  + ++ G DIVVGT G+L DL+  G LN+ +VRF +LDEAD LL  G  D I  ++ ++P+     +RLQ+   SATLHS ++ +L+EKI   PTWVDLKG+DSVPE+VHHVVV V+P+       L  +      H+ TD VH+                          ++ I+ + MDQ +IFCRT LDCD +E + +  GGG   +G       + +SC  L G R  QER+ NL+ FK GDVRFLICTDVAARGIDI G+PYVIN+TLPD  +NY+HR+GRVGRA+ +GLAISLVAK+   EKVWYH C+SRGKGC N ++KEEGGCTIW++E   L ++EE L+C+        P+  +P  ++   G   +G+  K  +       HV++L P+V+EL  LE ++QT +L L
Sbjct:    4 FSEMGVMPEIAQAVE-EMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQMEGKKGKATIKTGGAVLNK------WQMNPYDRGSAFAI-GSDGLCCQSREVKEWHGCRATRGVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDSYGEEFTMHDTIGCYLDIDKGQVKFSKNGKDLGLAFEIPPHIKNQ-ALFAACVLKNAELKFNF-GEEDFKFPPKDGYIGLCKAPDGSV-VKSQHSGSAQVV---------QTQNLPNAPKALIVEPSRELAEQTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPETVHHVVVPVNPKTDKLWERLGKN------HIRTDEVHAKDNTRPGANTPEMWSEATKILKGEYTVRAIKEHKMDQAIIFCRTKLDCDNMEQYFIQQGGGPDRKG-------HQFSCVCLHGDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAKE--KEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLGEIEEHLNCTIA---QVEPDIKVP--VDDFDGKVTYGQ--KRTLGGGLYKGHVDILAPTVQELAALEKEAQTSFLHL 729

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BLAST of NO06G01450 vs. NCBI_GenBank
Match: XP_005044356.1 (PREDICTED: ATP-dependent RNA helicase DDX1 [Ficedula albicollis] >XP_014750449.1 PREDICTED: ATP-dependent RNA helicase DDX1 [Sturnus vulgaris])

HSP 1 Score: 614.4 bits (1583), Expect = 4.900e-172
Identity = 352/768 (45.83%), Postives = 480/768 (62.50%), Query Frame = 0

Query:    5 FESLGLGEELIQAVEGDLNWLLPTDVQDEAIPLILGGGDVMAAAETGSGKTAAFSLPVLQLVMETKRREAEGKDGPA----GGAVAGRAKSATDWRLSGVDRDGMLGIEGADGGIAFA-GAPRWVGGRATLGVSKGKAYYEATLLDQGLGRVGWSTTAANYILGTDKYGLGFGGTGMKSQGGKFDPYGESFGQGDVIGCFLDLEKGVLGFSKNGKYLGDAFVLEGELKGQEAWFPAVALKQARMRLALVGPFRHAPPQEEGFQGVAQLPAESVHIPVFAKGSAEVVGGSGGTGVEKSSSGSNRPLAIIIEPARDLAEQVYNCICDYSRHVEG--VGVALVVGGVEQRETKTGIKAGCDIVVGTTGKLMDLIKRGLLNVDRVRFFILDEADRLLETGNRDDIMTLYHRLPKGGVGDRRLQICFFSATLHSPEITELAEKICDRPTWVDLKGKDSVPESVHHVVVEVDPEAQAFQALLASSPDASSVHVATDNVHSXXXXXXXXXXXXXXXXXXXXXXXXXXLKLIEAYNMDQCLIFCRTNLDCDLLETFLVGVGGGQHFRGKTEKGKENVYSCCVLAGMRSMQERRANLQAFKDGDVRFLICTDVAARGIDIQGLPYVINMTLPDVVENYIHRVGRVGRADSIGLAISLVAKQGFSEKVWYHSCASRGKGCVNRKVKEEGGCTIWFDEADSLRQVEERLHCSDGIPRMGPPEFTLPKTIEALLGGGKFGEASKNHVVNETVAKHVELLQPSVKELVDLEFKSQTLWLSL 766
            F  +G+  E+ QAVE +++WLLPTD+Q E+IPLILGGGDV+ AAETGSGKT AFS+PV+Q+V ET + + EGK G A    GGAV  +      W+++  DR     I G+DG    +     W G RAT GV+KGK YYE +  DQGL RVGWST  A+  LGTDK+G GFGGTG KS   +FD YGE F   D IGC+LD EKG + FSKNGK LG AF +   ++ Q A F A  LK A ++    G      P ++G+ G+ + P  SV +     GSA+VV         ++ +  N P A+I+EP+R+LAEQ  N +  + ++V+   +   L++GGV  R+  + ++ G DIVVGT G+L DLI  G +N+ +VRF +LDEAD LL  G  D I  ++ ++P+     +RLQ+   SATLHS ++ +L+EKI   PTWVDLKG+DSVPE+VHHVVV V+P+A      L  +      H+ TD VH+                          ++ I+ + MDQ +IFCRT +DCD +E + +  GGG   +G       + +SC  L G R  QER+ NL+ FK GDVRFLICTDVAARGIDI G+PYVIN+TLPD  +NY+HR+GRVGRA+ +GLAISLVAK+   EKVWYH C+SRGKGC N ++KEEGGCTIW++E   L ++EE L+C+  I ++  P+  +P  ++   G   +G+  K  +       HV++L P+V+EL  LE ++QT +L L
Sbjct:    4 FSEMGVMPEIAQAVE-EMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQMEGKKGKATIKTGGAVLNK------WQMNPYDRGSAFAI-GSDGLCCQSREIKEWHGCRATRGVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDSYGEEFTMHDTIGCYLDTEKGQIKFSKNGKDLGLAFEIPPHIRNQ-ALFAACVLKNAELKFNF-GEEDFKFPPKDGYVGLCKAPEGSV-VKSQHSGSAQVV---------QAQNLPNAPKALIVEPSRELAEQTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLIATGKINLSQVRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPETVHHVVVPVNPKADKLWERLGKN------HIRTDEVHAKDNTRPGANTPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKG-------HQFSCVCLHGDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAKE--KEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLGEIEEHLNCT--ITQV-EPDIKVP--VDDFDGKVTYGQ--KRALGGGLYKGHVDILAPTVQELAALEKEAQTSFLHL 729

[Close]

BLAST of NO06G01450 vs. NCBI_GenBank
Match: XP_012962250.1 (ATP-dependent RNA helicase DDX1 [Anas platyrhynchos])

HSP 1 Score: 614.0 bits (1582), Expect = 6.400e-172
Identity = 351/768 (45.70%), Postives = 481/768 (62.63%), Query Frame = 0

Query:    5 FESLGLGEELIQAVEGDLNWLLPTDVQDEAIPLILGGGDVMAAAETGSGKTAAFSLPVLQLVMETKRREAEGKDGPA----GGAVAGRAKSATDWRLSGVDRDGMLGIEGADGGIAFA-GAPRWVGGRATLGVSKGKAYYEATLLDQGLGRVGWSTTAANYILGTDKYGLGFGGTGMKSQGGKFDPYGESFGQGDVIGCFLDLEKGVLGFSKNGKYLGDAFVLEGELKGQEAWFPAVALKQARMRLALVGPFRHAPPQEEGFQGVAQLPAESVHIPVFAKGSAEVVGGSGGTGVEKSSSGSNRPLAIIIEPARDLAEQVYNCICDYSRHVEG--VGVALVVGGVEQRETKTGIKAGCDIVVGTTGKLMDLIKRGLLNVDRVRFFILDEADRLLETGNRDDIMTLYHRLPKGGVGDRRLQICFFSATLHSPEITELAEKICDRPTWVDLKGKDSVPESVHHVVVEVDPEAQAFQALLASSPDASSVHVATDNVHSXXXXXXXXXXXXXXXXXXXXXXXXXXLKLIEAYNMDQCLIFCRTNLDCDLLETFLVGVGGGQHFRGKTEKGKENVYSCCVLAGMRSMQERRANLQAFKDGDVRFLICTDVAARGIDIQGLPYVINMTLPDVVENYIHRVGRVGRADSIGLAISLVAKQGFSEKVWYHSCASRGKGCVNRKVKEEGGCTIWFDEADSLRQVEERLHCSDGIPRMGPPEFTLPKTIEALLGGGKFGEASKNHVVNETVAKHVELLQPSVKELVDLEFKSQTLWLSL 766
            F  +G+  E+ QAVE +++WLLPTD+Q E+IPLILGGGDV+ AAETGSGKT AFS+PV+Q+V ET + + EGK G A    GGAV  +      W+++  DR     I G+DG    +     W G RAT GV+KGK YYE +  DQGL RVGWST  A+  LGTDK+G GFGGTG KS   +FD YGE F   D IGC+LDL+KG + FSKNGK LG AF +   ++ Q A F A  LK A ++    G      P ++G+ G+ + P  SV +     G+A+VV         ++ +  N P A+I+EP+R+LAEQ  N +  + ++V+   +   L++GGV  R+  + ++ G DIVVGT G+L DL+  G LN+ +VRF +LDEAD LL  G  D I  ++ ++P+     +RLQ+   SATLHS ++ +L+EKI   PTWVDLKG+DSVPE+VHHVVV V+P+A      L  +      H+ TD VH+                          ++ I+ + MDQ +IFCRT +DCD +E + +  GGG   +G       + +SC  L G R  QER+ NL+ FK GDVRFLICTDVAARGIDI G+PYVIN+TLPD  +NY+HR+GRVGRA+ +GLAISLVAK+   EKVWYH C+SRGKGC N ++KEEGGCTIW++E   L ++EE L+C+  I ++  P+  +P  ++   G   +G+  K  +       HV++L P+V+EL  LE ++QT +L L
Sbjct:    4 FSEMGVMPEIAQAVE-EMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQMEGKKGKATIKTGGAVLNK------WQMNPYDRGSAFAI-GSDGLCCQSREVKEWHGCRATRGVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDSYGEEFTMHDTIGCYLDLDKGQIKFSKNGKDLGLAFEIPPHIRNQ-ALFAACVLKNAELKFNF-GEEDFKFPPKDGYIGLCKAPDGSV-VKSQHAGNAQVV---------QTQNLPNAPKALIVEPSRELAEQTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPETVHHVVVPVNPKADKLWERLGKN------HIRTDEVHAKDNTRPGANTPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKG-------HQFSCVCLHGDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAKE--KEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLGEIEEHLNCT--IAQI-EPDIKVP--VDDFDGKVTYGQ--KRALGGGLYKGHVDILAPTVQELAALEKEAQTSFLHL 729

[Close]

BLAST of NO06G01450 vs. NCBI_GenBank
Match: XP_005521906.1 (PREDICTED: ATP-dependent RNA helicase DDX1 [Pseudopodoces humilis] >XP_015476769.1 PREDICTED: ATP-dependent RNA helicase DDX1 [Parus major] >XP_023779257.1 ATP-dependent RNA helicase DDX1 [Cyanistes caeruleus])

HSP 1 Score: 613.6 bits (1581), Expect = 8.400e-172
Identity = 349/768 (45.44%), Postives = 477/768 (62.11%), Query Frame = 0

Query:    5 FESLGLGEELIQAVEGDLNWLLPTDVQDEAIPLILGGGDVMAAAETGSGKTAAFSLPVLQLVMETKRREAEGKDGPA----GGAVAGRAKSATDWRLSGVDRDGMLGIEGADGGIAFA-GAPRWVGGRATLGVSKGKAYYEATLLDQGLGRVGWSTTAANYILGTDKYGLGFGGTGMKSQGGKFDPYGESFGQGDVIGCFLDLEKGVLGFSKNGKYLGDAFVLEGELKGQEAWFPAVALKQARMRLALVGPFRHAPPQEEGFQGVAQLPAESVHIPVFAKGSAEVVGGSGGTGVEKSSSGSNRPLAIIIEPARDLAEQVYNCICDYSRHVEG--VGVALVVGGVEQRETKTGIKAGCDIVVGTTGKLMDLIKRGLLNVDRVRFFILDEADRLLETGNRDDIMTLYHRLPKGGVGDRRLQICFFSATLHSPEITELAEKICDRPTWVDLKGKDSVPESVHHVVVEVDPEAQAFQALLASSPDASSVHVATDNVHSXXXXXXXXXXXXXXXXXXXXXXXXXXLKLIEAYNMDQCLIFCRTNLDCDLLETFLVGVGGGQHFRGKTEKGKENVYSCCVLAGMRSMQERRANLQAFKDGDVRFLICTDVAARGIDIQGLPYVINMTLPDVVENYIHRVGRVGRADSIGLAISLVAKQGFSEKVWYHSCASRGKGCVNRKVKEEGGCTIWFDEADSLRQVEERLHCSDGIPRMGPPEFTLPKTIEALLGGGKFGEASKNHVVNETVAKHVELLQPSVKELVDLEFKSQTLWLSL 766
            F  +G+  E+ QAVE +++WLLPTD+Q E+IPLILGGGDV+ AAETGSGKT AFS+PV+Q+V ET + + EGK G A    GGAV  +      W+++  DR     I G+DG    +     W G RAT GV+KGK YYE +  DQGL RVGWST  A+  LGTDK+G GFGGTG KS   +FD YGE F   D IGC+LD EKG + FSKNGK LG AF +   ++ Q A F A  LK A ++    G      P ++G+ G+ + P  SV +     G+A+VV         ++ +  N P A+I+EP+R+LAEQ  N +  + ++V+   +   L++GGV  R+  + ++ G DIVVGT G+L DL+  G +N+ +VRF +LDEAD LL  G  D I  ++ ++P+     +RLQ+   SATLHS ++ +L+EKI   PTWVDLKG+DSVPE+VHHVVV V+P+A      L  +      H+ TD VH+                          ++ I+ + MDQ +IFCRT +DCD +E + +  GGG   +G       + +SC  L G R  QER+ NL+ FK GDVRFLICTDVAARGIDI G+PYVIN+TLPD  +NY+HR+GRVGRA+ +GLAISLVAK+   EKVWYH C+SRGKGC N ++KEEGGCTIW++E   L ++EE L+C+        P+  +P  ++   G   +G+  K  +       HV++L P+V+EL  LE ++QT +L L
Sbjct:    4 FSEMGVMPEIAQAVE-EMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQMEGKKGKATIKTGGAVLNK------WQMNPYDRGSAFAI-GSDGLCCQSREIKEWHGCRATRGVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDSYGEEFTMHDTIGCYLDTEKGQIKFSKNGKDLGLAFDIPPHIRNQ-ALFAACVLKNAELKFNF-GEEDFKFPPKDGYVGLCKAPESSV-VKSQHSGNAQVV---------QAQNLPNAPKALIVEPSRELAEQTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLVSTGKINLSQVRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPETVHHVVVPVNPKADKLWERLGKN------HIRTDEVHAKDNTRPGANTPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKG-------HQFSCVCLHGDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAKE--KEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLGEIEEHLNCTIA---QVEPDIKVP--VDDFDGKVTYGQ--KRALGGGLYKGHVDILAPTVQELAALEKEAQTSFLHL 729

[Close]

BLAST of NO06G01450 vs. NCBI_GenBank
Match: XP_009273836.1 (PREDICTED: ATP-dependent RNA helicase DDX1 [Aptenodytes forsteri])

HSP 1 Score: 613.6 bits (1581), Expect = 8.400e-172
Identity = 349/769 (45.38%), Postives = 475/769 (61.77%), Query Frame = 0

Query:    4 GFESLGLGEELIQAVEGDLNWLLPTDVQDEAIPLILGGGDVMAAAETGSGKTAAFSLPVLQLVMETKRREAEGKDGPA----GGAVAGRAKSATDWRLSGVDRDGMLGIEGADGGIAFA-GAPRWVGGRATLGVSKGKAYYEATLLDQGLGRVGWSTTAANYILGTDKYGLGFGGTGMKSQGGKFDPYGESFGQGDVIGCFLDLEKGVLGFSKNGKYLGDAFVLEGELKGQEAWFPAVALKQARMRLALVGPFRHAPPQEEGFQGVAQLPAESVHIPVFAKGSAEVVGGSGGTGVEKSSSGSNRPLAIIIEPARDLAEQVYNCICDYSRHVEG--VGVALVVGGVEQRETKTGIKAGCDIVVGTTGKLMDLIKRGLLNVDRVRFFILDEADRLLETGNRDDIMTLYHRLPKGGVGDRRLQICFFSATLHSPEITELAEKICDRPTWVDLKGKDSVPESVHHVVVEVDPEAQAFQALLASSPDASSVHVATDNVHSXXXXXXXXXXXXXXXXXXXXXXXXXXLKLIEAYNMDQCLIFCRTNLDCDLLETFLVGVGGGQHFRGKTEKGKENVYSCCVLAGMRSMQERRANLQAFKDGDVRFLICTDVAARGIDIQGLPYVINMTLPDVVENYIHRVGRVGRADSIGLAISLVAKQGFSEKVWYHSCASRGKGCVNRKVKEEGGCTIWFDEADSLRQVEERLHCSDGIPRMGPPEFTLPKTIEALLGGGKFGEASKNHVVNETVAKHVELLQPSVKELVDLEFKSQTLWLSL 766
            G   +G+  E+ QAVE +++WLLPTD+Q E+IPLILGGGDV+ AAETGSGKT AFS+PV+Q+V ET + + EGK G A    GGAV  +      W+++  DR     I G+DG    +     W G RAT GV+KGK YYE +  DQGL RVGWSTT A+  LGTDK+G GFGGTG KS   +FD YGE F   D IGC+LD++KG + FSKNGK LG AF +   ++ Q A F A  LK A ++    G      P ++G+ G+ + P           GS      SG   V ++ +  N P A+I+EP+R+LAEQ  N +  + ++V+   +   L++GGV  R+  + ++ G DIVVGT G+L DL+  G LN+ +VRF +LDEAD LL  G  D I  ++ ++P+     +RLQ+   SATLHS ++ +L+EKI   PTWVDLKG+DSVPE+VHHVVV V+P+A      L  +      H+ TD VH+                          ++ I+ + MDQ +IFCRT +DCD +E + +  GGG   +G       + +SC  L G R  QER+ NL+ FK GDVRFLICTDVAARGIDI G+PYVIN+TLPD  +NY+HR+GRVGRA+ +GLAISLVAK+   EKVWYH C+SRGKGC N ++KEEGGCTIW++E   L ++EE L+C+        P+  +P  ++   G   +G+  K  +       HV++L P+V+EL  LE ++QT +L L
Sbjct:    3 GVSEMGVMPEIAQAVE-EMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQMEGKKGKATIKTGGAVLNK------WQMNPYDRGSAFAI-GSDGLCCQSREVKEWHGCRATRGVTKGKYYYEVSCHDQGLCRVGWSTTQASLDLGTDKFGFGFGGTGKKSHNKQFDSYGEEFTMHDTIGCYLDIDKGQIKFSKNGKDLGLAFEIPPHIRNQ-ALFAACVLKNAELKFNF-GEDDFKFPPKDGYIGLCKAP----------DGSVVKSQHSGNAQVVQTQNLPNAPKALIVEPSRELAEQTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPETVHHVVVPVNPKADKLWERLGKN------HIRTDEVHAKDNTRPGANTPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKG-------HQFSCVCLHGDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAKE--KEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLGEIEEHLNCTIA---QVEPDIKVP--VDDFDGKVTYGQ--KRALGGGLYKGHVDILAPTVQELAALEKEAQTSFLHL 729

[Close]

BLAST of NO06G01450 vs. NCBI_GenBank
Match: XP_010144261.1 (PREDICTED: ATP-dependent RNA helicase DDX1 [Buceros rhinoceros silvestris])

HSP 1 Score: 613.6 bits (1581), Expect = 8.400e-172
Identity = 350/768 (45.57%), Postives = 478/768 (62.24%), Query Frame = 0

Query:    5 FESLGLGEELIQAVEGDLNWLLPTDVQDEAIPLILGGGDVMAAAETGSGKTAAFSLPVLQLVMETKRREAEGKDGPA----GGAVAGRAKSATDWRLSGVDRDGMLGIEGADGGIAFA-GAPRWVGGRATLGVSKGKAYYEATLLDQGLGRVGWSTTAANYILGTDKYGLGFGGTGMKSQGGKFDPYGESFGQGDVIGCFLDLEKGVLGFSKNGKYLGDAFVLEGELKGQEAWFPAVALKQARMRLALVGPFRHAPPQEEGFQGVAQLPAESVHIPVFAKGSAEVVGGSGGTGVEKSSSGSNRPLAIIIEPARDLAEQVYNCICDYSRHVEG--VGVALVVGGVEQRETKTGIKAGCDIVVGTTGKLMDLIKRGLLNVDRVRFFILDEADRLLETGNRDDIMTLYHRLPKGGVGDRRLQICFFSATLHSPEITELAEKICDRPTWVDLKGKDSVPESVHHVVVEVDPEAQAFQALLASSPDASSVHVATDNVHSXXXXXXXXXXXXXXXXXXXXXXXXXXLKLIEAYNMDQCLIFCRTNLDCDLLETFLVGVGGGQHFRGKTEKGKENVYSCCVLAGMRSMQERRANLQAFKDGDVRFLICTDVAARGIDIQGLPYVINMTLPDVVENYIHRVGRVGRADSIGLAISLVAKQGFSEKVWYHSCASRGKGCVNRKVKEEGGCTIWFDEADSLRQVEERLHCSDGIPRMGPPEFTLPKTIEALLGGGKFGEASKNHVVNETVAKHVELLQPSVKELVDLEFKSQTLWLSL 766
            F  +G+  E+ QAVE +++WLLPTD+Q E+IPLILGGGDV+ AAETGSGKT AFS+PV+Q+V ET + + EGK G A    GGAV  +      W+++  DR     I G+DG    +     W G RAT GV+KGK YYE +  DQGL RVGWST  A+  LGTDK+G GFGGTG KS   +FD YGE F   D IGC+LD++KG + FSKNGK LG AF +   ++ Q A F A  LK A ++    G      P ++G+ G+ + P  SV +     GSA+VV         ++ +  N P A+I+EP+R+LAEQ  N +  + ++V+   +   L++GGV  R+  + ++ G DIVVGT G+L DL+  G LN+ +VRF +LDEAD LL  G  D I  ++ ++P+     +RLQ+   SATLHS ++ +L+EKI   PTWVDLKG+DSVPE+VHHVVV V+P+A      L  +      H+ TD VH+                          ++ I+ + MDQ +IFCRT +DCD +E + +  GGG   +G       + +SC  L G R  QER+ NL+ FK GDVRFLICTDVAARGIDI G+PYVIN+TLPD  +NY+HR+GRVGRA+ +GLAISLVAK+   EKVWYH C+SRGKGC N ++KEEGGCTIW++E   L ++EE L+C+        P+  +P  ++   G   +G+  K  +       HV++L P+V+EL  LE ++QT +L L
Sbjct:    4 FSEMGVMPEIAQAVE-EMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQMEGKKGKATIKTGGAVLNK------WQMNPYDRGSAFAI-GSDGLCCQSREVKEWHGCRATRGVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDSYGEEFTMHDTIGCYLDIDKGQIKFSKNGKDLGLAFEIPPHVRNQ-ALFAACVLKNAELKFNF-GEDDFKFPPKDGYIGLCKAPDGSV-VKSQHSGSAQVV---------QTQNLPNAPKALIVEPSRELAEQTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPETVHHVVVLVNPKADKLWEKLGKN------HIRTDEVHAKDNTRPGANTPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKG-------HQFSCVCLHGDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAKE--KEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLGEIEEHLNCTIA---QVEPDIKVP--VDDFDGKVTYGQ--KRALGGGLYKGHVDILAPTVQELAALEKEAQTSFLHL 729

[Close]

BLAST of NO06G01450 vs. NCBI_GenBank
Match: KFO86221.1 (ATP-dependent RNA helicase DDX1, partial [Buceros rhinoceros silvestris])

HSP 1 Score: 613.2 bits (1580), Expect = 1.100e-171
Identity = 350/768 (45.57%), Postives = 478/768 (62.24%), Query Frame = 0

Query:    5 FESLGLGEELIQAVEGDLNWLLPTDVQDEAIPLILGGGDVMAAAETGSGKTAAFSLPVLQLVMETKRREAEGKDGPA----GGAVAGRAKSATDWRLSGVDRDGMLGIEGADGGIAFA-GAPRWVGGRATLGVSKGKAYYEATLLDQGLGRVGWSTTAANYILGTDKYGLGFGGTGMKSQGGKFDPYGESFGQGDVIGCFLDLEKGVLGFSKNGKYLGDAFVLEGELKGQEAWFPAVALKQARMRLALVGPFRHAPPQEEGFQGVAQLPAESVHIPVFAKGSAEVVGGSGGTGVEKSSSGSNRPLAIIIEPARDLAEQVYNCICDYSRHVEG--VGVALVVGGVEQRETKTGIKAGCDIVVGTTGKLMDLIKRGLLNVDRVRFFILDEADRLLETGNRDDIMTLYHRLPKGGVGDRRLQICFFSATLHSPEITELAEKICDRPTWVDLKGKDSVPESVHHVVVEVDPEAQAFQALLASSPDASSVHVATDNVHSXXXXXXXXXXXXXXXXXXXXXXXXXXLKLIEAYNMDQCLIFCRTNLDCDLLETFLVGVGGGQHFRGKTEKGKENVYSCCVLAGMRSMQERRANLQAFKDGDVRFLICTDVAARGIDIQGLPYVINMTLPDVVENYIHRVGRVGRADSIGLAISLVAKQGFSEKVWYHSCASRGKGCVNRKVKEEGGCTIWFDEADSLRQVEERLHCSDGIPRMGPPEFTLPKTIEALLGGGKFGEASKNHVVNETVAKHVELLQPSVKELVDLEFKSQTLWLSL 766
            F  +G+  E+ QAVE +++WLLPTD+Q E+IPLILGGGDV+ AAETGSGKT AFS+PV+Q+V ET + + EGK G A    GGAV  +      W+++  DR     I G+DG    +     W G RAT GV+KGK YYE +  DQGL RVGWST  A+  LGTDK+G GFGGTG KS   +FD YGE F   D IGC+LD++KG + FSKNGK LG AF +   ++ Q A F A  LK A ++    G      P ++G+ G+ + P  SV +     GSA+VV         ++ +  N P A+I+EP+R+LAEQ  N +  + ++V+   +   L++GGV  R+  + ++ G DIVVGT G+L DL+  G LN+ +VRF +LDEAD LL  G  D I  ++ ++P+     +RLQ+   SATLHS ++ +L+EKI   PTWVDLKG+DSVPE+VHHVVV V+P+A      L  +      H+ TD VH+                          ++ I+ + MDQ +IFCRT +DCD +E + +  GGG   +G       + +SC  L G R  QER+ NL+ FK GDVRFLICTDVAARGIDI G+PYVIN+TLPD  +NY+HR+GRVGRA+ +GLAISLVAK+   EKVWYH C+SRGKGC N ++KEEGGCTIW++E   L ++EE L+C+        P+  +P  ++   G   +G+  K  +       HV++L P+V+EL  LE ++QT +L L
Sbjct:    4 FTEMGVMPEIAQAVE-EMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQMEGKKGKATIKTGGAVLNK------WQMNPYDRGSAFAI-GSDGLCCQSREVKEWHGCRATRGVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDSYGEEFTMHDTIGCYLDIDKGQIKFSKNGKDLGLAFEIPPHVRNQ-ALFAACVLKNAELKFNF-GEDDFKFPPKDGYIGLCKAPDGSV-VKSQHSGSAQVV---------QTQNLPNAPKALIVEPSRELAEQTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPETVHHVVVLVNPKADKLWEKLGKN------HIRTDEVHAKDNTRPGANTPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKG-------HQFSCVCLHGDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAKE--KEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLGEIEEHLNCTIA---QVEPDIKVP--VDDFDGKVTYGQ--KRALGGGLYKGHVDILAPTVQELAALEKEAQTSFLHL 729

The following BLAST results are available for this feature:

BLAST of NO06G01450 vs. NCBI_GenBank

BLAST of NO06G01450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM26192.1	0.000e+0	69.54	atp-dependent rna helicase ddx1 [Nannochloropsis g...	[more]
PRW60433.1	3.100e-182	47.46	ATP-dependent RNA helicase DDX1 [Chlorella sorokin...	[more]
PSC75014.1	5.800e-181	47.64	ATP-dependent RNA helicase DDX1 [Micractinium cond...	[more]
XP_009907774.1	3.800e-172	45.70	PREDICTED: ATP-dependent RNA helicase DDX1 [Picoid...	[more]
XP_005044356.1	4.900e-172	45.83	PREDICTED: ATP-dependent RNA helicase DDX1 [Ficedu...	[more]
XP_012962250.1	6.400e-172	45.70	ATP-dependent RNA helicase DDX1 [Anas platyrhyncho...	[more]
XP_005521906.1	8.400e-172	45.44	PREDICTED: ATP-dependent RNA helicase DDX1 [Pseudo...	[more]
XP_009273836.1	8.400e-172	45.38	PREDICTED: ATP-dependent RNA helicase DDX1 [Apteno...	[more]
XP_010144261.1	8.400e-172	45.57	PREDICTED: ATP-dependent RNA helicase DDX1 [Bucero...	[more]
KFO86221.1	1.100e-171	45.57	ATP-dependent RNA helicase DDX1, partial [Buceros ...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL091	nonsL091	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR147	ngnoR147	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK000307	NSK000307	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO06G01450.1	NO06G01450.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
Naga_100072g7	gene4345	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO06G01450.1	NO06G01450.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO06G01450 ID=NO06G01450|Name=NO06G01450|organism=Nannochloropsis oceanica|type=gene|length=5375bp
CTACTTTCACCAACTCTACACTGGCAGGAAAAAATGGCGGGTGGCTTTGA
GTCCCTGGGTCTTGGTGAAGAGCTTATTCAGgtacgcatttgtccttctc
ccctccattcctagcctccctaacccgcagacaggcaggatgaggttgac
gagcataaacccatccatcaactgactcaaacgaaattcaacccagGCGG
TGGAGGGTGACTTAAATTGGCTGCTGCCTACGGACGTGCAGGATGAGGCC
ATCCCCTTGATTTTGGGCGGGGGGGATGTGATGGCTGCGGCCGAGACGGG
GAGCGGGAAGACAGCCGCCTTCTCGCTACCAGTGCTGCAGCTCGTCATGG
AGACCAAACGCAGGGAAGCTGAAGGTAAGGACGGGCCTGCAGGTGGAGCT
GTGGCAGGGAGAGCCAAAAGCGCGACGGATTGGCGGTTGAGCGGGGTGGA
TAGGGATGGGATGCTGGGAATCGAGGGAGCGGATGGCGGCATTGCCTTCG
CGGGGGCTCCACGGTGGGTGGGCGGACGGGCTACCTTGGGGGTAAGCAAG
GGCAAGGCTTATTACGAAGCAACGCTGCTAGATCAGGGCTTGGGGAGGGT
GGGATGGTCGACGACGGCAGCGAATTACATACTGGGCACCGACAAATATG
GCTTGGGGTTTGGAGGGACGGGGATGAAGAGCCAGGGAGGAAAGTTTGAT
CCGTACGGAGAAAGCTTTGGACAAGGGGATGTGATTGGTTGTTTTTTAGA
CTTGGAGAAGGGCGTGCTGGGTTTCAGTAAGAACGGGAAGTATCTGGGGG
ATGCGTTTGTGTTGGAAGGGGAGTTGAAAGGGCAAGAGGCGTGGTTTCCG
GCGGTGGCGCTGAAGCAGGCACGGATGAGGCTTGCCTTGGTTGGGCCTTT
CAGACACGCCCCTCCCCAAGAGGAAGGCTTTCAAGGCGTCGCCCAGCTAC
CTGCCGAGAGTGTGCACATCCCTGTCTTTGCAAAGGGCAGTGCCGAGGTC
GTTGGTGGTAGCGGAGGAACTGGTGTAGAGAAAAGCAGCAGTGGCAGCAA
CCGCCCCCTGGCCATCATCATTGAGCCTGCACGGGATCTGGCCGAGCAAG
TCTACAACTGCATCTGTGACTACTCTCGGCACGTGGAAGGGGTGGGAGTG
GCGCTAGTCGTCGGTGGGGTGGAACAACGGGAGACCAAGACAGGAATTAA
AGCTGGGTGTGATATCGTTGTTGGGACGACGGGCAAATTGATGGATCTGA
TCAAACGCGGTCTGCTCAATGTGGATCGAGTTCGTTTTTTCATTCTGGAC
GAGGCTGATCGATTGCTCGAGACAGGGAACAGGGATGATATTATGACCTT
GTATCACCGTTTGCCGAAGGGAGGGGTGGGGGACCGGCGGTTGCAGATCT
GCTTTTTTTCGGCCACCTTGCATTCACCGGAGATCACAGAGCTGGCGGAG
AAGATCTGTGATAGACCGACGTGGGTAGATTTGAAGGGGAAGGATAGCGT
ACCCGAGTCGGTGCATCACGTAGTGGTGGAAGTCGATCCAGAGGCCCAGG
CGTTTCAGGCATTGCTTGCCTCATCCCCCGACGCTTCCTCGGTGCATGTG
GCTACCGACAACGTCCACTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCGC
GGAGGACGAACGGTCCGAACAAATTAAACGTCTCAAGCCCCTAGTTTTAC
TCAAGCTAATTGAAGCCTACAATATGGACCAATGCCTAATCTTCTGTCGC
ACCAACCTCGACTGCGACCTGCTTGAAACCTTCTTGGTCGGCGTCGGGGG
CGGCCAACACTTCCGGGGCAAAACTGAAAAAGGCAAAGAAAACGTCTACT
CCTGCTGTGTCCTGGCAGGAATGCGCAGTATGCAAGAAAGGCGGGCGAAC
CTTCAGGCGTTCAAAGATGGGGACGTGCGTTTCTTGATCTGCACGGACGT
GGCTGCGCGAGGGATAGACATACAAGGGCTACCCTATGTGATCAACATGA
CCTTGCCCGATGTTGTGGAGAACTACATTCACAGGGTAGGAAGAGTGGGG
AGGGCGGATAGTATAGGGTTGGCTATTTCTCTCGTGGCGAAGCAGGGGTT
CAGTGAGAAGGTCTGGTACCATTCGTGTGCAAGTCGGGGGAAGGGGTGCG
TGAATAGAAAGGTAAAGGAGGAAGGAGGCTGCACTATTTGGTTTGATGAG
GCGGATTCACTTAGGCAGGTGGAGGAGAGGTTGCATTGTAGTGACGGTAT
TCCACGGATGGGCCCTCCGGAGTTTACATTACCAAAGACGATTGAGGCGT
TGTTGGGTGGGGGAAAGTTTGGAGAGGCGAGTAAGAATCATGTTGTGAAT
GAGACAGTTGCAAAACATGTAGAATTGTTGCAGCCGTCGGTGAAAGAGTT
GGTTGATTTGGAGTTTAAGTCGCAGACGTTATGGTTGAGTTTGAGGCAGC
GATATCGGGCGGGGGTGCATGGATAGTCGGAGGGGAAATAGAGAGGAGGG
GAGGGGTAAAAGAGTCAAAGTTACCTTGGGTTTGCGATGAAAGCTTTGAT
CCGATGATATCTGGGGAACTGTGCCTGTGGTCCTGTTCTAAGACTTGCCT
ACTTTCCCTCCTTTTCCTCCTCCTCCCTCCTCCTCCATCTGTTATTCCTC
CACATTAAAATAACAACATATGTATGTGCTTTTGCAATTAAATGTAAGGC
GTCATTTGTATCTTCCTTCTTTCTTGCTTAAATGTGCCTTCCTTTTAAAG
GTGTAAAATCATGTTTGTACAAAAGCGCACACGAGCCCCTTTCCTCTTGC
TCTTCGCATACGCCGGCCACTCTCCCCTTTTCTACCAGACACGTGTCCTG
CTATTTTCCCTTAATTCTTCATGTCAAAGATTCAATTCTAAGATCTGATA
CAAATCATAAGGAGATATCTAATTCTACACTTTGATCTCAATCCCAAATA
AATATATTAGCATTTTTTCCCCGTTTTTTATCATTCTCTCTCCCCACTAT
TCCCTTTTTGCACTCCTACCCACCTACGGCATATCTGCCTCCATCGGTGG
CGCCTTGGCATTTTTCTTCAAAATAATTAACGTCTCTCTCAACCTATTGT
TATGCTGTCTCACCATGAAATTAAATAATCGTCTTGCCGACGCCGCACGA
TACCGATTTCCCAACGTCACAAATGCCTCCTCCAATTTCACCCTCTTCTC
CTCTGCCAGGTCCATCTGGGTCCACAAGTCCGTCATTTCGGAATCCATAT
CTTTTCTCACCCCACACAATAATCCTGCATACTCGTCCTTGGCATTCAAC
TTCCCGTAGACGTCCTCTAGCTCCTTCTCGTACTTTGCAACTGTCCCTTT
TGCCTCCATCTTCTCCAGCTCCACCTGCGATCGAATCGCCTCAAACTGAC
CCACAAGCACGTCGTACTGCTCTCTCAAACGGTCCATTTCCTCCTCCGCC
TGTTGTCGTTTAAACAAGGCATTTTTTGCTGTCCGTTCATTCTCCAAGGC
CTCCCTCATACTCTCTTTCAATCTCTCCTCTATCTTCCCCACCCTCAGCT
CCATCTGATGCTTTACCGCCTCGATCTGTCCCACGGATGCACCCAATTCC
TCCTCTAGCTGCCGACATCTCTCCTTAACCTCCGTGTGCTTCTTAACCCG
TGCTACCAAGGCCGCTTTAGCCTCTCTTATTTCCCCCTGCAGGCGATTTA
CCAACCCAGCGCTTCTGTCCTTGGTATGGTTTTGCTGCATGCTTAATGCT
TCCAACTTCCCATAGGCCAGGTCTAGCTCTATTTCAAGTTCTGCTAGCCT
TTCCCCATCCTTAGCAATTACCTCTTGACTTGTACCAGTGGTAGGGGTGC
AGATTAGAGGGGTGCTCGATGCCGACACCATAGCAGGAGATCCGTCATGG
GACAACATTCCCTCCTTCTGCTGCTGCTGCTCGGAAGGACCTGCGCGGTT
CATGTGCAATTCTTCGATTTGACGACGGAGGCTCGTGACGGTGGTCCGGA
GCTGGGTGCTCTCTGCTTCATGTCGGCCCATTAAATCCTGGGCCTTCTCC
AACTCCCGCACCTTCCGCGAGATCTCCAGCTGCGCCGTCGTCCACTCTTG
TTTGAGCATCCCCAGGGCCACCCCCCCTGTCGCCGATGCTTTTTTTAGCT
TATCTGACAAAGACTTTCTCTCTCCTTCTAACGTCAGGAGATGCGCCTTG
TATTTTTCGATTAAGCGCTTCTTCTCTCCCGTCTTCCGACTAAACAACGT
CACTTTCCGCTTCGGGCTCAGAGGGAGGGCCCCATTTAGCGGAGATGTCG
CGGAAGCAGTAACACTACTGGATAAGCTCTCAATGTCTGTCAAGACCGTC
TCAAGCTGCTTTATCAGGGTAGGGGCCCCAAGCATGTTCTTTGCCGTCGC
AGCAGCAGTGTCCAAGCTTCCACCCGCACGCGAGCTTTGCATCGAGTTAA
GCTGCTGGTGCTGCTGTTGCCGTTGCATCGCCTTCCCAATTGTGCCGATC
CCTAGTGTCCACCGGCGTACTTGAGGCTCAGCCGTCGTTTGCTGTTGGAT
GGCTTTGCGCATAGCTTGCAGCATCTCCTCGTCGTGCTCCAGATCCATGT
CCAAAATCATGTTATCGTCTTCGTTCTCCATCCCGCTCTCCCCCTCTTTC
CCATTCCCGACCAAGCGCTCCACTTGATCCTTTTCAATGACTTCCGCTCC
CTCACCCTCCTCTCCATTGTCGAAGTGCATGCTGCTGTCCACCTCGGAGT
AATCAGAATCATATCCCCCCATCTGACTGCCTGTCTCGGAAGAAAAGTAA
GCAGCGTCGGCGGAGTCTTCCCCCTCTTCGTCCTTACCGATCACAAGAGC
GTTCTTCTGAATAATTTTCCTGGCCAGATCTTCCTCGGGTCTGATTTAAA
TTCGAGGGCAGATGCGGAATCAAGGGGGGAGGAGTTAGTGAGTAGAGGAT
GGCAGCGAGTGAGCTTTGGTATAGTTCATTCGACTTTAAATGAGGCAGGC
GGGGGATTTTCGCCATATACATGACCTTTACTGGTGTTCTTTCGTATAAA
AAGACGAAATCCGCATATCGTATACCTATTGTCCAATGGCTTGCACTGTG
TGAGGAGGGGTTTCGCCGCCCTTTCATCCCTCCCCTCACAATGCCCCCAC
ACACACGTACCGGCCCGCCCCAGTCAAAGTATGCTTGTCTTTCAACACAT
TATTTTTCAGCTGCTGCATCAGCATGTTTAGCTCAGCCCCTGTGTCTTTC
ATGCTACCTGTGTTGGTAAGCTCCTCCGGCATGGCCATTTGGTTGGGAGG
GACTTCCGGCTTTGAAGAATGACTTCTGCCCTTGAAGTCTCAGCGGCGTA
TGTAAGGGGGGCGCCCCCTGTGGTT

protein sequence of NO06G01450.1

>NO06G01450.1-protein ID=NO06G01450.1-protein|Name=NO06G01450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=776bp
MAGGFESLGLGEELIQAVEGDLNWLLPTDVQDEAIPLILGGGDVMAAAET
GSGKTAAFSLPVLQLVMETKRREAEGKDGPAGGAVAGRAKSATDWRLSGV
DRDGMLGIEGADGGIAFAGAPRWVGGRATLGVSKGKAYYEATLLDQGLGR
VGWSTTAANYILGTDKYGLGFGGTGMKSQGGKFDPYGESFGQGDVIGCFL
DLEKGVLGFSKNGKYLGDAFVLEGELKGQEAWFPAVALKQARMRLALVGP
FRHAPPQEEGFQGVAQLPAESVHIPVFAKGSAEVVGGSGGTGVEKSSSGS
NRPLAIIIEPARDLAEQVYNCICDYSRHVEGVGVALVVGGVEQRETKTGI
KAGCDIVVGTTGKLMDLIKRGLLNVDRVRFFILDEADRLLETGNRDDIMT
LYHRLPKGGVGDRRLQICFFSATLHSPEITELAEKICDRPTWVDLKGKDS
VPESVHHVVVEVDPEAQAFQALLASSPDASSVHVATDNVHSSSSSSSSSS
AEDERSEQIKRLKPLVLLKLIEAYNMDQCLIFCRTNLDCDLLETFLVGVG
GGQHFRGKTEKGKENVYSCCVLAGMRSMQERRANLQAFKDGDVRFLICTD
VAARGIDIQGLPYVINMTLPDVVENYIHRVGRVGRADSIGLAISLVAKQG
FSEKVWYHSCASRGKGCVNRKVKEEGGCTIWFDEADSLRQVEERLHCSDG
IPRMGPPEFTLPKTIEALLGGGKFGEASKNHVVNETVAKHVELLQPSVKE
LVDLEFKSQTLWLSLRQRYRAGVHG*

Synonyms

Publications