NO06G01370, NO06G01370 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G01370 vs. NCBI_GenBank
Match: EWM26166.1 (Ubiquitin-conjugating enzyme/RWD [Nannochloropsis gaditana]) HSP 1 Score: 351.7 bits (901), Expect = 6.800e-93 Identity = 168/246 (68.29%), Postives = 196/246 (79.67%), Query Frame = 0 Query: 112 QHVVFSGLDTIGCTNDMLLKKELMRLKADVEKGKRGWRVDLSWTESARMLGVILEHEGFVKANLELIFPKKYPQEPPKLKYLGPRYDDTVDFILGADSAFEPCKKENWNDTFTCTSLLMIIMELVKDKYPITDLLEFDDFEQILVKVCRSRLPGVPQKVKEGLVYFGVRLEPKS---NRSVKTSKGVGYSDGGRGSACHDFSVPDARFKEHLAAFAAFLTMVKKEEMTDIMLARITHIKMGAWIWQ 355 QHVVFSGLD IGCT DMLLKKEL RLKADVE GKRGW VDL+W E+ RMLGV LEHEGFVKA LEL FP YPQEPP Y GPR+DD VDF+LGAD+ EPC+KENWNDTF+C+SLL ++MELVKDKYPIT+ L FD++E LV++CRSRLPGVPQ+VKEG++YFGVRL P S ++K + GVGYSD R SA HDFSVPDARFK+H+ FA FL + K T +ML RI H++M AW+WQ Sbjct: 113 QHVVFSGLDRIGCTKDMLLKKELTRLKADVELGKRGWNVDLTWAEATRMLGVRLEHEGFVKAELELTFPAAYPQEPPLFHYKGPRFDDAVDFVLGADT-LEPCRKENWNDTFSCSSLLTLVMELVKDKYPITESLVFDEWESTLVQLCRSRLPGVPQRVKEGMIYFGVRLVPGSGGDTGTLKPTAGVGYSDSSRASAFHDFSVPDARFKKHVETFARFLQLAK--TATSVMLQRIQHVEMSAWLWQ 355
BLAST of NO06G01370 vs. NCBI_GenBank
Match: EWM26162.1 (ubiquitin conjugating enzyme family protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 218.8 bits (556), Expect = 6.800e-53 Identity = 109/168 (64.88%), Postives = 125/168 (74.40%), Query Frame = 0 Query: 632 VCLSLLGTWAGEPWDPAHSNLSQLLISILAFIFTTEPLRNEPGLEASSDKTVALYNAYIRLETLATAMIGPLSRPSSLPTCEFQEVIKVHFRESWYDVIRPDLLAWADKNDFEEGKEEGGREEL--------ASTSGQILRMAWFRQAMGSGKYKKMMLTLIDKMDGL 792 VCLSLLGTW+GEPWDPAHSNLSQL ISILAFIFTTEPLRNEPGLEASS TVALYNAY+RLETL TAMIG L+RP +LP EF+ V+K HFRE+W IRPDL+ W ++ E EGGR A+ SGQI RM WF+QA+G +YK MM L++ MD L Sbjct: 11 VCLSLLGTWSGEPWDPAHSNLSQLFISILAFIFTTEPLRNEPGLEASSPATVALYNAYLRLETLRTAMIGTLARPPALPPSEFEGVVKQHFREAWAGAIRPDLMQWGER----EVLGEGGRXXXXXXXXXCWAAISGQITRMGWFQQAVGKKRYKAMMKALVESMDAL 174
BLAST of NO06G01370 vs. NCBI_GenBank
Match: XP_005849980.1 (hypothetical protein CHLNCDRAFT_141888 [Chlorella variabilis] >EFN57878.1 hypothetical protein CHLNCDRAFT_141888 [Chlorella variabilis]) HSP 1 Score: 159.8 bits (403), Expect = 3.800e-35 Identity = 81/185 (43.78%), Postives = 105/185 (56.76%), Query Frame = 0 Query: 543 KRIMLEVENLRDHLQDMTDGQIFVCFSEAALLLWKVLIMPSSGTPYFGGCFEFHLSIPPDYPNHPPKCVFMTTGGGQVRYNPNLYHNGKVCLSLLGTW---AGEPWDPAHSNLSQLLISILAFIFTTEPLRNEPGLEASSDKTVA-LYNAYIRLETLATAMIGPLSRPSSLPTCEFQEVIKVHFR 724 +R+ E+ + L +FV EA LWK +I TPY GGCF F + PPDYP PPK + TTGGG VR+NPNLY GKVCLSLLGTW GE W P +S + Q+LISI + I +P NEPG E +D + + Y+A + T+ AM+ L P F+EV++ HFR Sbjct: 687 RRVGRELASCESDLPVSASSSVFVVADEANCNLWKAIITGPENTPYCGGCFLFDIYFPPDYPRVPPKVLIRTTGGGSVRFNPNLYQEGKVCLSLLGTWQGGRGESWSPDYSTVLQVLISIQSLILVDDPYYNEPGYEQRADDSNSNRYSAALMPNTIKWAMLDQLQHPPEY----FREVVQQHFR 867
BLAST of NO06G01370 vs. NCBI_GenBank
Match: CBJ32983.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 159.1 bits (401), Expect = 6.400e-35 Identity = 86/187 (45.99%), Postives = 104/187 (55.61%), Query Frame = 0 Query: 544 RIMLEVENLRDHLQDMTDGQIFVCFSEAALLLWKVLIMPSSGTPYFGGCFEFHLSIPPDYPNHPPKCVFMTTGGGQVRYNPNLYHNGKVCLSLLGTWAGEPWDPAHSNLSQLLISILAFIFTTEPLRNEPGLEA-----SSDKTVALYNAYIRLETLATAMIGPL--SRPSSLPTCEFQEVIKVHFR 724 RI EV L L D IF+ E + + +I GTPY GCFEF + +PPDYPN PPK F+TTG G+VR+NPNLY GKVCLSLLGTWAG W+P S L Q+LISI + IF EP NEPG E + YN IR TL ++ L RP +L +V + HFR Sbjct: 714 RISQEVSTLATSLPVQPDSSIFLRVDEDRFDVMRAMITGPKGTPYECGCFEFDILLPPDYPNSPPKVHFLTTGSGRVRFNPNLYQTGKVCLSLLGTWAGPGWNPKTSTLLQVLISIQSLIFVAEPYFNEPGFEGQLGTPQGRVASSSYNTRIRNGTLLLGVLEALEEKRPGAL-----SDVKRTHFR 895
BLAST of NO06G01370 vs. NCBI_GenBank
Match: GBG24725.1 (Ubiquitin-conjugating enzyme E2 E2 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 158.7 bits (400), Expect = 8.400e-35 Identity = 86/206 (41.75%), Postives = 108/206 (52.43%), Query Frame = 0 Query: 542 MKRIMLEVENLRDHLQDMTDGQIFVCFSEAALLLWKVLIMPSSGTPYFGGCFEFHLSIPPDYPNHPPKCVFMTTGGGQVRYNPNLYHNGKVCLSLLGTWAGEPWDPAHSNLSQLLISILAFIFTTEPLRNEPGLE-----ASSDKTVALYNAYIRLETLATAMIGPLSRPSSLPTCEFQEVIKVHFR----------ESWYDVIRP 733 M++I E+ LR L IF E + + VLI+ TPY G F F P +YPN PP +F TTGGG VR+NPNLY NGKVCLSLLGTW+G W P S L Q+LISI A IF +P NEPG E AS YN IR +TL ++ + P L F++V+ +HF E WY + +P Sbjct: 518 MRKITREISTLRTSLPMSWGSGIFARVDETRVDVISVLILGPEDTPYANGAFLFDFYFPSEYPNKPPLAIFKTTGGGSVRFNPNLYANGKVCLSLLGTWSGPGWTPGTSTLLQVLISIQALIFVEQPYFNEPGYESTMGTASGKACSDAYNQAIRRDTLRWGILDMIKNPPYL----FRDVLDIHFSLKKQVISDQCEQWYQLSKP 719
BLAST of NO06G01370 vs. NCBI_GenBank
Match: XP_003117708.1 (CRE-UBC-17 protein [Caenorhabditis remanei] >EFO82306.1 CRE-UBC-17 protein [Caenorhabditis remanei] >OZG08078.1 hypothetical protein FL82_01555, partial [Caenorhabditis remanei] >POM49370.1 hypothetical protein FL81_02685 [Caenorhabditis remanei]) HSP 1 Score: 157.5 bits (397), Expect = 1.900e-34 Identity = 92/234 (39.32%), Postives = 125/234 (53.42%), Query Frame = 0 Query: 539 REVMKRIMLEVENLRDHLQDMTDGQIFVCFSEAALLLWKVLIMPSSGTPYFGGCFEFHLSIPPDYPNHPPKCVFMTTGGGQVRYNPNLYHNGKVCLSLLGTWAGEP---WDPAHSNLSQLLISILAFIFTTEPLRNEPGLE-----ASSDKTVALYNAYIRLETLATAMIGPLSRPSSLPTCEFQEVIKVHFRESWY--DVIRPDLLAWAD--KNDFEEGKEEGGREELASTSG 761 R+ KRI E+ ++ + L I+VC+ E + + KVLI TPY G FEF + P YP PPKC F+TTG G VR+NPNLY++GK+CLS+LGTW G P W+P + +L Q+L+SI IF +P NEPG E D+ YN I TL A+ L +PS F+EVI+ H W + I AW D +NDF + K ++ A +G Sbjct: 417 RDRTKRIAKELASIANALPLNASNSIYVCYDEGRVDIIKVLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGTWEGRPEEKWNP-YCSLMQVLVSIQGLIFVKDPYFNEPGFERYQGTERGDEYSRKYNLQIEHATLNYAIREQLRKPSD----HFKEVIEKHL---WLKREAILKQARAWIDNMRNDFGDDKLSKRKDVFAFEAG 642
BLAST of NO06G01370 vs. NCBI_GenBank
Match: EGT52992.1 (hypothetical protein CAEBREN_05866 [Caenorhabditis brenneri]) HSP 1 Score: 157.5 bits (397), Expect = 1.900e-34 Identity = 93/234 (39.74%), Postives = 124/234 (52.99%), Query Frame = 0 Query: 539 REVMKRIMLEVENLRDHLQDMTDGQIFVCFSEAALLLWKVLIMPSSGTPYFGGCFEFHLSIPPDYPNHPPKCVFMTTGGGQVRYNPNLYHNGKVCLSLLGTWAGEP---WDPAHSNLSQLLISILAFIFTTEPLRNEPGLE-----ASSDKTVALYNAYIRLETLATAMIGPLSRPSSLPTCEFQEVIKVHFRESWY--DVIRPDLLAWAD--KNDFEEGKEEGGREELASTSG 761 R+ KRI E+ ++ + L I+VC+ E + + KVLI TPY G FEF + P YP PPKC F+TTG G VR+NPNLY++GK+CLS+LGTW G P W+P + +L Q+L+SI IF +P NEPG E D+ YN I TL A+ L +PS F+EVI+ H W + I AW KNDF + K R+ A +G Sbjct: 402 RDRTKRIAKELASIVNSLPLNASNSIYVCYDEGRVDIIKVLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGTWEGRPEEKWNP-YCSLMQVLVSIQGLIFVKDPYFNEPGFERYQGTERGDEYSRKYNLQIEHATLNYAIREQLRKPSE----HFREVIEKHL---WLKREAILKQAEAWIQNVKNDFGDDKTSKRRDVFAFETG 627
BLAST of NO06G01370 vs. NCBI_GenBank
Match: NP_509188.3 (Probable ubiquitin-conjugating enzyme protein 17 [Caenorhabditis elegans] >Q11076.3 RecName: Full=Probable ubiquitin-conjugating enzyme protein 17 >CCD61841.3 Probable ubiquitin-conjugating enzyme protein 17 [Caenorhabditis elegans]) HSP 1 Score: 157.5 bits (397), Expect = 1.900e-34 Identity = 92/234 (39.32%), Postives = 124/234 (52.99%), Query Frame = 0 Query: 539 REVMKRIMLEVENLRDHLQDMTDGQIFVCFSEAALLLWKVLIMPSSGTPYFGGCFEFHLSIPPDYPNHPPKCVFMTTGGGQVRYNPNLYHNGKVCLSLLGTWAGEP---WDPAHSNLSQLLISILAFIFTTEPLRNEPGLEA-----SSDKTVALYNAYIRLETLATAMIGPLSRPSSLPTCEFQEVIKVHFRESWY--DVIRPDLLAWAD--KNDFEEGKEEGGREELASTSG 761 R+ KRI E+ ++ + L I+VC+ E + + KVLI TPY G FEF + P YP PPKC F+TTG G VR+NPNLY++GK+CLS+LGTW G P W+P + +L Q+L+SI IF +P NEPG E D+ YN I TL A+ L +PS F+EVI+ H W + I AW D NDF + K ++ A +G Sbjct: 401 RDRTKRIAKELASIANALPLNASNSIYVCYDEGRVDIIKVLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGTWEGRPEEKWNP-YCSLMQVLVSIQGLIFVKDPYFNEPGFERYQGTDRGDEYSRKYNLQIEHATLNYAIREQLKKPSE----HFKEVIEKHL---WLKREAILKQAQAWIDNVSNDFGDDKMSKRKDVFAFETG 626
BLAST of NO06G01370 vs. NCBI_GenBank
Match: PNW83997.1 (hypothetical protein CHLRE_04g212401v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 157.5 bits (397), Expect = 1.900e-34 Identity = 85/208 (40.87%), Postives = 121/208 (58.17%), Query Frame = 0 Query: 539 REVMKRIMLEVENLRDHLQDMTDGQIFVCFSEAALLLWKVLIMPSSGTPYFGGCFEFHLSIPPDYPNHPPKCVFMTTGGGQVRYNPNLYHNGKVCLSLLGTWAGEPWDPAHSNLSQLLISILAFIFTTEPLRNEPGLEASSD-----KTVALYNAYIRLETLATAMIGPL-----SRPSSLPTCEFQEVIKVHFRESWYDVIRPDLLA 737 R+ +KRI E+ L L D +FV E + + + L++PSS TPY G F F + +PP YP PP+ F+TTGGG+VR+NPNLY++GKVCLSLLGTW G WDPA S++ Q+L+SI + I +P NEPG EA + + A Y+A R TLA +++ L + + F +V++ H Y +P+LLA Sbjct: 323 RQRLKRITGEISGLATGLPLDWDAAVFVAVDEHRVDVLRALLIPSSDTPYANGAFVFDIWLPPSYPALPPQVQFLTTGGGKVRFNPNLYNDGKVCLSLLGTWQGPSWDPAISSVLQVLVSIQSMILVADPYYNEPGWEAQAHSPTGRQAAADYSASQRYNTLAFSILPALQTAVAGKNALAGGATFADVLRRH-----YAAHKPELLA 525
BLAST of NO06G01370 vs. NCBI_GenBank
Match: PTQ35570.1 (hypothetical protein MARPO_0070s0037 [Marchantia polymorpha]) HSP 1 Score: 157.1 bits (396), Expect = 2.400e-34 Identity = 75/181 (41.44%), Postives = 107/181 (59.12%), Query Frame = 0 Query: 542 MKRIMLEVENLRDHLQDMTDGQIFVCFSEAALLLWKVLIMPSSGTPYFGGCFEFHLSIPPDYPNHPPKCVFMTTGGGQVRYNPNLYHNGKVCLSLLGTWAGEPWDPAHSNLSQLLISILAFIFTTEPLRNEPGLEASSDKTVALYNAYIRLETLATAMIGPLSRPSSLPTCEFQEVIKVHF 723 M + E+ +L L + I +C E+ + + + +I+ GTPY G F F + +PPDYP PP F+TTGGG+VR+NPNLY +GK+CLSLLGTW+G W P S L Q+L+SI + IF +P NEPG E + N+ R TL+ A++G L +P L F +V++ HF Sbjct: 651 MLHLSKEIASLATTLPLEWESSIHLCVDESRVDVLRAMIVGPQGTPYQNGLFMFDIFLPPDYPQVPPHVHFLTTGGGKVRFNPNLYDSGKICLSLLGTWSGPGWVPGKSTLLQVLVSIQSLIFVKDPYYNEPGFEQTKSPEAEKENSRHREHTLSLAVLGALRKPDPL----FADVVREHF 827 The following BLAST results are available for this feature:
BLAST of NO06G01370 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G01370 ID=NO06G01370|Name=NO06G01370|organism=Nannochloropsis oceanica|type=gene|length=4118bpback to top protein sequence of NO06G01370.1 >NO06G01370.1-protein ID=NO06G01370.1-protein|Name=NO06G01370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=886bpback to top Synonyms
Publications
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