NO06G01260, NO06G01260 (gene) Nannochloropsis oceanica

Overview
NameNO06G01260
Unique NameNO06G01260
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3885
Alignment locationchr6:402512..406396 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:402512..406396 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
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BLAST of NO06G01260 vs. NCBI_GenBank
Match: EWM26167.1 (hypothetical protein Naga_100121g4 [Nannochloropsis gaditana])

HSP 1 Score: 553.1 bits (1424), Expect = 2.200e-153
Identity = 449/1270 (35.35%), Postives = 596/1270 (46.93%), Query Frame = 0 
Query:   67 DSPLPEAEAGTLLARSFPSLVPPALLPSRPPREQNFSHFRHVRPTKETASKCYSALTWTFPVPVRLVGARCSSTLPLRGVEAFCEGGIGAKYGGEEGGLMVPVIVEMAVFPEGEKSXXXXXXXXXXXXXXXXXXXXXXXXDLRLQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKA------PP----LEYLWRSLIISLADRVSLELFQSPADQVQTSVQLTVPRVLLRLYPFXXXXXXXXXXXXXXXKGVDE-ELSLVSLRDVQALGRTMRRKQMMEGLVKARKVEMDVVDVSRWMLLPAFRAEGLEANFQGGKGEYILHTRAPDASLSSP----FSLPAMHTSSSSPSMYDGQDVEVRHKRQSSLGIALGSCRLNVSRRIVQSVEVLRQGFKYK--KIAPPSPLPAASVSCYRYKLLNLTQHSLWLGQHMTNEMIRLCPYSTQEYSTRAWVERAPRQAPSLLLRFALNIKTLAEEGGEKGGKEAGET-----------DNPSVWSEPVEVDFVGARRVSLRTSGDGKHDDVSLL---LYSSNNEVVPLAA--------NRQVQLWVVVEKEGLETRIFLHGSCEVRNYLPVPLDLRLCPRNSAACARHNSLSSSFSSSVGKRNETVVRLKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEALM----------------DEKPLPVRTRSSSFRSSKTI-----SSIAA--VGDS-----------AQNFMMVQARV-----SPSSSISSSTSVNSDGAFGQAMILTLPESGHSQQNCPXXXXXXXXXXXDAAAPAVHLRHPKVTCTVLGQAPPTGPCEPPVWFFCHLRRVML--QPQLSSAVARIGGGKDGAEEKRSSMKGWLSLEVWPVAYIMNSGPSVDYRVLSWKHLDPHESSLLSPAPTSAIDPSAFYSSPVTIGGGLSPA---RGESGVISSSGSRIDGTESLPTSRGGSLXXXXXXXXXXXXXXXXXXXXNSARDVGAAKRAIQEKIQRLSYK---------RQLSGASXXXXXXXXXXXXXXXXAMGGPRHSIKSVS---ERDRDSNTWSPLPAGAGGAVALTTADPRHGLAVSLRQGSSSGSISDGSRRGTE-------------------QTVFFVPSHSLLAWIRGGDMGHFDAAAALDEAPKPLLDPFSSPPSSGCGTTEEKKRAVGGGLLGQGMLSYAIRRPAFLGPSLLLHVVPAWTVVNHCPFPLSLVALTPRHVFAAT 1223
            + PLPE E G LL R  P+L P +   S P  ++  S +R  +        C +AL W FP+PVR    RC   + L+ V          KY         P I+E+AV PEGE S                         +R Q                                                       XXXXX         PP    LE +WR +++SLA+ +SLELF SP DQ+Q+ + +T+P   L+LYP                +  D  EL++VS+RD+  +   M+ + +  GL+  R +EMDVVDVSRW LLPA R   L A +  G       +R  D + SSP     S P  +T  S+P +   ++ +  H  + SLGI++  CR+NVSRRI+QS++VLRQ FK +   I   +P P+++  CYRYK++N TQHSLWLGQH+TNE+IR  P S+QEY+ RAW + A RQ  SLLLRFALN+   +E+  E        T           D PSVWSEPV++D +GAR + LRTSG G HD   LL   L  ++    P  +        NR+V +WVVVEK+GLETR+ LHG CE+RNYLPV LD+R+C +NS      +  +SS  S+  KR+E VV +KA                            DE  M                 ++P   RT + S   S TI      +IA    GD+            Q  MMVQARV     S   S SS     S+ AFGQ MILTLPE     Q C            +  +P    RHP  +CTVLGQAPP  P EP VWF CHLRRV+L  Q  +SSA      G+         + GWLSLE+WP+AY+MNSG  +D+RVL  KH  P  +S L+P   +   P   + +P        PA     E  +++          +L  S   S                      SARDV AAKRAI +KIQ LS K         R++S  S                  GG + S  S +      ++   WSPL  GA  A+A+   DPR+GLA S+R  +S+   ++G+ + T+                   Q  F + S  LLAW+R G+MGH D  AALDE P+PLL+     P+   G+    +    G   GQ ++ YA+RRPA+LGPSLL+ V P WTV NHCPFPLSL+AL  R     T
Sbjct: 1263 EGPLPEPEPGALLMRCHPALAPSS--SSAPAVDKTHSTYRPAQHGDTRTLACLTALKWQFPLPVRARSVRCPDHIILQSV----------KYTPPAD---FPTILELAVVPEGEIS--ESGEMNRCETGNGRESNVVVRWKVRFQAGGDEDGLVATAEARSEREVGAKEKHKELHLIECDQGIGGRRWQLNLYWDRTHEHXXXXXXXHVLQHLWPPNMLSLECVWRPMVLSLANLISLELFLSPMDQIQSILHVTIPHAFLQLYPKETRGAEGITVAPGRGEIEDRGELAVVSMRDLD-VRYNMKEQGVKSGLLTVRDLEMDVVDVSRWTLLPALRGNFLTARYSAGNEGSEPTSR--DHTCSSPGLSHDSSPPRYT--STPGL--REEDKTGHPVRQSLGISVDWCRINVSRRIMQSIDVLRQDFKARNASITDTTP-PSSAARCYRYKIVNHTQHSLWLGQHLTNEIIRAAPCSSQEYTARAWAKVAGRQPSSLLLRFALNMTATSEK--EHSATTVASTMTTRNEMIAGVDGPSVWSEPVDIDLLGARCLPLRTSGQGHHDVFLLLDKVLSGTDTRDKPKISRQLQTSPGNREVLMWVVVEKKGLETRVSLHGGCEIRNYLPVGLDIRICSQNSEGAISPSFFASSGPSASKKRSEAVVNVKA--------GPGGLPLAMPPSQEALSLLLDEGFMAPRSRIRGGNNRTSGTRKEPSHNRTTTDSNTFSTTILGSDGDNIAGGLSGDAMTAPPVDSTYMLQKLMMVQARVSSRQISTCGSSSSDPCPKSETAFGQTMILTLPEIVQPDQAC----------KVNLTSPH---RHPMTSCTVLGQAPPASPGEPTVWFLCHLRRVILHSQKSISSACPTHSDGR--------YIWGWLSLELWPLAYLMNSGLPLDHRVLPGKHPQPVAASPLTPVSRNRA-PIPLHPTPPCESMSSMPAPTPNLEQDMVARDIDDRRRNSNLSMSANDS---------------ESGKVRPSARDVDAAKRAIHDKIQLLSQKRLQKKMGMTREVSAPSSTDGRGDHQNEDLSIKKEGGLKPSANSAAFSLYEPQNDRVWSPLSPGAPAAIAVCRTDPRYGLAFSVRPSTSTHG-TNGTHKTTDGDDCWIGATCIGAPLISKSQRDFSMSSSDLLAWVRSGNMGHVDGNAALDECPQPLLNLGLLGPAGEHGSIWNDR---PGCFSGQRLIPYAVRRPAYLGPSLLVDVTPLWTVANHCPFPLSLLALVSRRPMNTT 2456
The following BLAST results are available for this feature:
BLAST of NO06G01260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM26167.12.200e-15335.35hypothetical protein Naga_100121g4 [Nannochloropsi... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL089nonsL089Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR145ngnoR145Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G01260.1NO06G01260.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G01260.1NO06G01260.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G01260 ID=NO06G01260|Name=NO06G01260|organism=Nannochloropsis oceanica|type=gene|length=3885bp
ATGACCGCAATGCACCCTTTGCTCCTTTCCTTCTCCTCCTTATCCTCGTC
TACGTTCACACCCTCCTTTACTAGTAGCAGTGCCACGCGAATGGCAGCAG
CAGCAGTAGCAGCAACAACTGCTACAGCAACAGCTGCAGCAACTTCACTC
ACCCATACCAACCTCATTCCTCTCTCCGTCCTTGGCATGACCATGCTCGA
TTCTCCCCTCCCAGAAGCTGAAGCCGGCACCCTGCTCGCTCGCTCCTTTC
CATCACTTGTCCCTCCCGCCCTCCTCCCCTCCCGCCCTCCCCGTGAGCAA
AATTTTTCACATTTCCGTCATGTCCGCCCCACGAAAGAAACGGCTTCTAA
ATGTTATTCTGCATTGACTTGGACGTTTCCGGTACCTGTACGGCTGGTCG
GGGCGAGATGTTCTAGCACCTTGCCTCTCAGAGGGGTCGAAGCTTTTTGT
GAAGGAGGTATAGGGGCGAAGTATGGAGGGGAAGAGGGTGGGTTGATGGT
TCCGGTTATTGTGGAGATGGCTGTGTTTCCAGAGGGGGAAAAAAGTGACG
GTGGTTGGGGAGGAGGAGGAGGAGGAGGAGTAGAAAGGGAGGGAGGGTTG
ATGGTGGTGGTACAATGGGATTTACGGTTGCAGCTTGGGGGGAATGGTAG
TGGCGCTGAGGTTGTAGAAAGAAGCGTGGAGCAGCAGCAGCAGCAGCAGC
AGCAGCTCTTGGCGTGTGACCATGAGGTGGGCGGCCGACGATGGCAGCTC
AACATCTACTGGGACGAAAACCTCGTCGTGCAGCAGCAGCAGCAACAGCT
AGAACAACAGCATGGAAAAGCTCCTCCTTTAGAATACCTGTGGCGTTCGT
TGATTATTTCATTGGCTGATCGAGTTTCCCTGGAGCTCTTCCAGTCCCCG
GCCGATCAAGTACAAACCTCAGTGCAATTGACTGTCCCTCGTGTCCTCCT
TCGCCTCTATCCCTTTCCTACAACCGGCAGAGGAAGAGGGGAAGGAAGGA
ATGACGAGGACAAGGGTGTGGACGAGGAGCTGTCGTTGGTCTCTCTAAGG
GATGTCCAGGCCCTTGGGAGGACTATGAGGAGGAAGCAAATGATGGAGGG
TCTTGTGAAGGCGAGAAAGGTCGAGATGGATGTCGTGGACGTGTCTCGCT
GGATGCTTTTGCCGGCTTTTAGAGCAGAGGGGTTGGAGGCAAATTTTCAA
GGAGGAAAGGGTGAATATATTTTGCACACACGCGCTCCGGATGCCTCGCT
GTCGTCTCCCTTCTCTTTGCCAGCCATGCATACCTCGTCTTCGTCACCAT
CGATGTATGATGGGCAGGATGTCGAGGTACGCCATAAGAGACAATCGAGC
CTGGGGATAGCCCTCGGGAGTTGTCGTTTAAACGTCTCGCGACGCATCGT
CCAGTCCGTGGAAGTGCTTCGACAGGGCTTCAAATACAAGAAAATTGCCC
CTCCTTCGCCTCTCCCGGCCGCCTCCGTCTCGTGCTATCGCTACAAACTC
CTTAACCTCACGCAACACTCGCTGTGGCTAGGCCAACATATGACCAACGA
AATGATCCGTCTTTGCCCTTATTCCACGCAAGAATACAGCACCAGGGCAT
GGGTGGAACGAGCGCCTCGACAGGCCCCCTCCCTGCTGCTTCGCTTCGCG
CTCAACATCAAAACTCTCGCGGAAGAAGGAGGGGAGAAAGGAGGGAAGGA
GGCAGGGGAGACAGACAACCCCTCTGTTTGGTCGGAACCCGTCGAGGTGG
ATTTTGTGGGGGCGCGACGTGTGTCGTTGCGGACGAGTGGGGATGGGAAG
CATGACGACGTCTCCCTGTTGCTTTACAGCAGCAACAACGAGGTGGTTCC
TTTGGCGGCAAATCGCCAGGTACAACTATGGGTGGTGGTAGAGAAAGAAG
GGTTGGAAACTCGCATTTTCCTCCACGGCAGTTGTGAGGTCCGAAATTAC
CTCCCCGTCCCCCTCGACCTTCGTCTCTGCCCAAGAAACTCGGCGGCATG
TGCTCGACACAACTCTCTCTCCTCTTCCTTTTCTTCCTCAGTGGGGAAAA
GGAATGAGACAGTCGTTCGACTGAAAGCAGCAGCAGCAGGGCTTCATCCA
GCTGCTGCCTCCACTGCTGCCACTGCTACGGAATCTGAAGGTAGCACGAC
TACGTTGCTGCTAGACGAGGCATTAATGGACGAGAAGCCCCTTCCTGTCC
GTACCAGGAGCAGCAGCTTCCGAAGCAGCAAGACTATTTCATCGATTGCT
GCAGTTGGTGACTCGGCTCAGAACTTCATGATGGTGCAAGCACGCGTGTC
GCCATCCTCCTCCATTTCTTCCTCCACTTCGGTCAACAGTGATGGAGCAT
TCGGCCAAGCCATGATCCTGACTCTTCCCGAGTCCGGACATTCCCAACAA
AACTGTCCTTCCTCTTCCTCCTCTTCGTCGTCCTCCCTTTTCGACGCTGC
TGCTCCTGCTGTTCACTTGCGGCACCCGAAGGTGACTTGCACCGTACTCG
GACAAGCCCCTCCCACCGGACCTTGCGAACCACCCGTGTGGTTTTTTTGT
CATTTGCGGCGTGTGATGCTTCAACCGCAATTGTCTTCGGCAGTTGCAAG
GATAGGGGGTGGGAAGGATGGAGCTGAGGAGAAAAGAAGCAGTATGAAGG
GGTGGTTGTCGTTGGAAGTGTGGCCAGTCGCGTATATCATGAATTCTGGT
CCTTCGGTGGATTATCGTGTGCTATCCTGGAAGCACCTTGACCCCCATGA
GTCATCTTTGCTCTCTCCCGCACCCACATCCGCAATTGACCCTTCGGCTT
TCTATTCTTCCCCTGTTACTATTGGCGGTGGACTGTCACCGGCACGCGGA
GAAAGTGGTGTCATCAGCAGCAGCGGCAGTAGGATAGACGGGACTGAATC
TCTGCCTACAAGCCGTGGAGGTAGTCTTAGTATGAGTACGAGCATAAGTG
CCAGCAGCAGCAGTAGCAGCAGCAGCAGTGGGCTTGGGAATAGCGCCCGG
GATGTGGGTGCAGCTAAGCGAGCGATCCAAGAGAAGATTCAGCGGCTTTC
CTACAAGCGTCAACTTAGTGGTGCTTCTACTACTACCAGTGCTGCTACTC
CACAATTGGCAGCAGCGACAGCAGCGGCGATGGGAGGGCCCAGACACTCT
ATTAAGTCTGTCAGTGAACGTGATCGCGACAGCAATACGTGGTCTCCACT
GCCTGCTGGTGCTGGAGGGGCTGTCGCTCTTACTACAGCTGACCCACGGC
ATGGCCTAGCGGTGAGTCTACGACAAGGCAGCAGCAGTGGCAGTATCAGC
GACGGCAGCAGGAGGGGCACGGAGCAGACCGTTTTTTTTGTTCCGAGCCA
TAGTTTGCTGGCCTGGATTCGTGGTGGGGATATGGGGCATTTTGACGCAG
CTGCTGCTTTGGACGAGGCACCTAAGCCTCTACTCGACCCTTTCTCCTCT
CCTCCCTCCTCAGGATGCGGAACGACAGAGGAAAAGAAGAGGGCAGTGGG
TGGGGGGCTGTTAGGTCAGGGTATGCTTTCGTATGCCATTCGACGGCCTG
CTTTTTTGGGTCCATCATTGCTCCTGCATGTGGTGCCGGCATGGACGGTT
GTAAATCATTGTCCGTTTCCCCTTTCATTGGTGGCCTTGACGCCACGGCA
CGTTTTTGCCGCTACTGCCGGTGGTGTAAGCAGCGGTGGAAACGGTGACA
GCAGTAGCACGATGATTTTTGGGGGGGGCATGGTAAAAAGCAGGATGTTG
CGTCAGCAGCAGCAGAATTTGGGGGTTTCCATGAAGTGGGGCTGCAGGTC
CTGCCCGAGGGTGGGAGGGAAGGAGTATTGGATGTGTGGTCGTGGCCCTC
CAGCAGCAACAGAAACAGTGGAACTAAGGCAGTAG
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protein sequence of NO06G01260.1

>NO06G01260.1-protein ID=NO06G01260.1-protein|Name=NO06G01260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1295bp
MTAMHPLLLSFSSLSSSTFTPSFTSSSATRMAAAAVAATTATATAAATSL
THTNLIPLSVLGMTMLDSPLPEAEAGTLLARSFPSLVPPALLPSRPPREQ
NFSHFRHVRPTKETASKCYSALTWTFPVPVRLVGARCSSTLPLRGVEAFC
EGGIGAKYGGEEGGLMVPVIVEMAVFPEGEKSDGGWGGGGGGGVEREGGL
MVVVQWDLRLQLGGNGSGAEVVERSVEQQQQQQQQLLACDHEVGGRRWQL
NIYWDENLVVQQQQQQLEQQHGKAPPLEYLWRSLIISLADRVSLELFQSP
ADQVQTSVQLTVPRVLLRLYPFPTTGRGRGEGRNDEDKGVDEELSLVSLR
DVQALGRTMRRKQMMEGLVKARKVEMDVVDVSRWMLLPAFRAEGLEANFQ
GGKGEYILHTRAPDASLSSPFSLPAMHTSSSSPSMYDGQDVEVRHKRQSS
LGIALGSCRLNVSRRIVQSVEVLRQGFKYKKIAPPSPLPAASVSCYRYKL
LNLTQHSLWLGQHMTNEMIRLCPYSTQEYSTRAWVERAPRQAPSLLLRFA
LNIKTLAEEGGEKGGKEAGETDNPSVWSEPVEVDFVGARRVSLRTSGDGK
HDDVSLLLYSSNNEVVPLAANRQVQLWVVVEKEGLETRIFLHGSCEVRNY
LPVPLDLRLCPRNSAACARHNSLSSSFSSSVGKRNETVVRLKAAAAGLHP
AAASTAATATESEGSTTTLLLDEALMDEKPLPVRTRSSSFRSSKTISSIA
AVGDSAQNFMMVQARVSPSSSISSSTSVNSDGAFGQAMILTLPESGHSQQ
NCPSSSSSSSSSLFDAAAPAVHLRHPKVTCTVLGQAPPTGPCEPPVWFFC
HLRRVMLQPQLSSAVARIGGGKDGAEEKRSSMKGWLSLEVWPVAYIMNSG
PSVDYRVLSWKHLDPHESSLLSPAPTSAIDPSAFYSSPVTIGGGLSPARG
ESGVISSSGSRIDGTESLPTSRGGSLSMSTSISASSSSSSSSSGLGNSAR
DVGAAKRAIQEKIQRLSYKRQLSGASTTTSAATPQLAAATAAAMGGPRHS
IKSVSERDRDSNTWSPLPAGAGGAVALTTADPRHGLAVSLRQGSSSGSIS
DGSRRGTEQTVFFVPSHSLLAWIRGGDMGHFDAAAALDEAPKPLLDPFSS
PPSSGCGTTEEKKRAVGGGLLGQGMLSYAIRRPAFLGPSLLLHVVPAWTV
VNHCPFPLSLVALTPRHVFAATAGGVSSGGNGDSSSTMIFGGGMVKSRML
RQQQQNLGVSMKWGCRSCPRVGGKEYWMCGRGPPAATETVELRQ*
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Synonyms
Publications