NO06G00390, NO06G00390 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G00390 vs. NCBI_GenBank
Match: EWM26156.1 (hypothetical protein Naga_100014g85 [Nannochloropsis gaditana]) HSP 1 Score: 580.9 bits (1496), Expect = 7.100e-162 Identity = 423/975 (43.38%), Postives = 504/975 (51.69%), Query Frame = 0 Query: 1 MLGIHPQQEEAEARYRMRYRGRKGTLAFIHSCLSFLHPSSLGKVEGFLREKEGAVLREEGREGGVTVVEEVITLIANECPENRRESLEKEAARQLARHSSLANALFLRFLGSTRLALSDITFRPPPPGVGGRARLTLVLWEPSLHQSKPPPILLFPALHVLLREGGREGGAEGLVALLLQTFWRQLSVCGYFPSEKMKAALGPALAVFVASSLGGGGQTSVLAHFSPRRPFSLYLEGKAGVGKSSFLAHMASALGAAIGDCFDPRMDVRFVKQNLNKPLLELERELSLRPNNNDLSVMSIIQGRRQTFSQTKPGLVVVGLEEVPPP--EGWAEGGREGXXXXXXXXXXXXXXXXXXXXXXXXXXAGKITQLPTLSLLADRFSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYQGRGGISTHTEILCIFTSNYPLLPPALALLRSLPLFEHLVCVTVEGLGEGGREGGGEGEKQMFVRCYLQQLLALKCDLPVDAVEVE---GWTGGSEGVR-----EGGEDIRGLVRQMRAVAFLTAASWRREGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVWVNGKLLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNHA-------------------------NLFPLSSAHQLEDERIRKVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTLQYYFQGILAPAVVVIQHRHGPPSVPRFSS---------SSSLASTIMTALTSTSTGHQS--LP--PSSLGPIDVQHYRVVKSLYDGPEVPNVRDDIKKALLLP------------------------RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVAIHLQAFTLSAQLKIRELVEDTPSMVAFSTARSALQKEGLLFVVEVGEVLSPELRSRASLVLME 904 MLGIHP QE AE+ YR + RK LAF+H+CLS L PSSL +VEGF+R E VL E G + VVEEV+ + CP NRRE+L++EAARQ ARH SLANALF RFL +T+L LSDIT+R PPPG GGRARL+L++WE SLHQS PPP+ L PAL LL EGGREGG E +V+L TFW+ L + GY P +K + PAL F ASSLG G TSVLAHFSP RPFSLYL G AGVGKS+F+A AL A+ CFDP++ V++VKQNLNK +LERE++LRPNNNDLSVMSIIQGRRQ+F+ PGLVVVGLEEVPPP EG A E A ++Q+ LSLL RFSG YQGR GISTHTE+LCIFTSNYPLLP A LL LPLF+HLV V +EGL +G E G G+K F R YL +LLA + P + VEVE G G G R EG DIRG+VRQ+R +AFLTA +W++E RG +V V+G +++ A NLFP + D+R+ +V+ XXXXXXXXXXXXXXXXXXXXXXXXXXX SSLA +M ALT+ S LP P LGPIDV++Y +VKS YDGP PN+RDDIK+A+ LP RVAIHLQA + AQLKIREL+EDTPSMVA+STA+SAL+KEGL+F+VEVGE LSPE+ SRASL+L E Sbjct: 132 MLGIHPDQEMAESSYRKQSSERKSALAFLHACLSSLRPSSLARVEGFVRSLERQVL-ESGEKNWTAVVEEVVEYVVRVCPGNRRETLKREAARQRARHCSLANALFQRFLHATQLTLSDITYRAPPPGNGGRARLSLLMWEASLHQSTPPPLFLLPALTKLLAEGGREGGREKVVSLFTDTFWQALLLNGYHPESNLKERVTPALFAFAASSLGERGATSVLAHFSPTRPFSLYLTGDAGVGKSAFVARFPPALATAVEACFDPQIQVQYVKQNLNKTCRDLEREMTLRPNNNDLSVMSIIQGRRQSFAHAHPGLVVVGLEEVPPPIAEGTAGASEE--------------------------DANVMSQVSALSLLVRRFSG---------RTGEDASSAQPRASPHLSRQAQRQYQGRDGISTHTEVLCIFTSNYPLLPSARILLSPLPLFQHLVHVPMEGL-KGRGENVGRGQK--FARDYLGELLARRLARPRETVEVEEVQGLGGCETGARVEAGLEGEGDIRGMVRQLRTLAFLTANAWKKEERG---EKDGKTRTIRVSVREEGVGKVREEAESLVNVTVDGNVILRFRRARARRLPFLEEGGGVLQAFRKSSRLEQDTVQEYRQLRQAQXXXXQQQEVKCGGQNVSDKEVTIRNLFPCPFQGRFLDDRVERVVQAFKAERMDRNKEIRLVGKVISDAGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLPSSLARCLMRALTTACPSQTSSRLPWIPLPLGPIDVEYYPIVKSAYDGPGAPNLRDDIKRAVCLPLSSLSTLAGTSIFPAVDKRKGKSHLSETENNVVASRKDSTSHSGAEQASLKFGTMSAQPSTSVPLSSPRVAIHLQARSFQAQLKIRELLEDTPSMVAYSTAKSALRKEGLIFIVEVGEALSPEIGSRASLILYE 1064
BLAST of NO06G00390 vs. NCBI_GenBank
Match: XP_002178922.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49620.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 210.7 bits (535), Expect = 1.900e-50 Identity = 230/917 (25.08%), Postives = 336/917 (36.64%), Query Frame = 0 Query: 1 MLGIHPQQEEAEARYRMRYRGRKGTLAFI----HSCLSFLHPSSLGKVEG-------FLREKEGAVLREEGREGGVTVVEEVITLI---ANECPENRRESLEKEAARQLARHSSLANALFLRFLGSTRLALSDITFRPPPPGVGGRARLTLVLWEPSLHQSKPPPILLFPALHVLLREGGREGGAEGLVALLLQTFWRQLSVCGYFPSEKMKAALGPALAVFVASSLGGGGQTSVL--AHFSPRRPFSLYLEGKAGVGKSSFLAHMASALGAAIGDCFDPRMDVRFVKQNLNKPLLELERELSLRPNNNDLSVMSIIQGRRQTFSQTKPGLVVVGLEEVPPPEGWAEGGREGXXXXXXXXXXXXXXXXXXXXXXXXXXAGKITQLPTLSLLADRFSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYQGRGGISTHTEILCIFTSNYPLLPPALALLRSLPLFEHLVCVTVEGLGEGGREGGGEGEKQMFVRCYLQQLLALKCDLPVDAVEVEGWTGGSEGVREGGEDIRGLVRQMRAVAFLTAASWRREGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVWVNGKLLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNHANLFPLSSAHQLEDERIRKVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTLQYYFQGILAPAVVVIQHRHGPPSVPRFSSSSSLASTIMTALTSTSTGHQSLPPSSLGPIDVQHYRVVKSLYDGPEVPNVRDDIKKALLLPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVAIHLQAFTLSAQLKIRELVEDTPSMVAFSTARSALQKEGLLFVVEVGEVLSPELRSRASLVL 902 M G++P QE E Y ++ L F +C L + + K+ L + E+ V E++ LI P R E L+ E R L +S+++N F L + D+ F+ + R+T+ L+EP + PP P+L+ L GAE + L++ TFW QL GYF + +++ L P+L + S + + AHF+P P YL GKAGVGKSS A AL A + DP + VRFVKQNLNKP+ L EL LRPNNNDLSVMSII+GRR T Q+KPGLVVV LEE+ + A+ QL T L++ RFSG R GIS I+ +FTSNY L + L L +F++LVCV + + R ++ L Q + C L +D + G D R LVR +R +AF T ++ + + +LL + H ++ S ++++ I+ + ++ LAPAV++ + R S I + ST + + + ++ Y+++KSLYD + PN+RDDI + V + L T+ AQL IRE++EDTPSM AFST +SAL K GLLF+V + E ++PELRSRASL++ Sbjct: 137 MFGLYPHQETLERLYTSSFKMVFSLLLFCDRLREACPDALQDTEVQKLVDQAETECRLLGTSSLDSISEQIYAASRKVPEKIAGLIQTAVQSDPRLRVEQLQHEHERILCCYSTVSNVHMQLFTQYYDLVIKDVYFK--DSHIEKYQRITIYLYEPDVDLLAPPKFTFLPSLYTALTR-----GAEAVSELMVDTFWTQLLRQGYFCATEIQTLLAPSLNHYFLSGVTRDSTVPIQLNAHFTPTFPLCFYLHGKAGVGKSSLAHAFAPALNATVEQYADPEIVVRFVKQNLNKPMDTLRLELELRPNNNDLSVMSIIRGRRMTMRQSKPGLVVVNLEEMSRDDANADP----------------------------------NQLATAQLISQRFSG--------------------RTGDCQGDAGIPRNSSRRGISEEATIIPLFTSNYVLGVSSYQALSKLHMFQNLVCVEMIAVSGEDRVRFANSYFLQCLQDRLPQFILGNCTLCLD-------------IPLGIGDTRPLVRHLRMLAFYTCST----------------------------------------LAITSQLL----------------------------------------HIHVSIVKKSDSYKISANGIQSM------ELKIGSMGNIIPSKQRTFDPRTMLAIEKLRSRQLGAVGASVPLNLEELSIIFDFWLAKTLAPAVILSKDR----------------SLIKSIFASTK---KIVDVRCIEHVNSSEYKMMKSLYDPSDTPNLRDDILQ--------------------------------------------FGPESLVCVELHCETVDAQLCIREIIEDTPSMTAFSTEKSALHKSGLLFLVYIHEEITPELRSRASLIV 830
BLAST of NO06G00390 vs. NCBI_GenBank
Match: XP_002290470.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92222.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 173.7 bits (439), Expect = 2.600e-39 Identity = 215/857 (25.09%), Postives = 309/857 (36.06%), Query Frame = 0 Query: 67 VVEEVITLIANECPENRRESLEKEAARQLARHSSLANALFLRFLG-----STRLALSDITFRPPPPG--VGGRARLTLVLWEPSLHQ----SKPPPILLFPALHVLLRE----GGREGGAEGLVALLLQTFWRQLSVCGYFPSEKMKAALGPALAVFVASSLGGGGQTS----VLAHFSPRRPFSLYLEGKAGVGKSSFLAHMASALGAAIGDCFDPRMDVRFVKQNLNKPLLELERELSLRPNNNDLSVMSIIQGRRQTFSQTKPGLVVVGLEEVPPPEGWAEGGREGXXXXXXXXXXXXXXXXXXXXXXXXXXAGKITQLPTLSLLADRFSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYQGRGGISTHTEILCIFTSNYPLLPPALALLRSLPLFEHLVCVTVEGLGEGGREGGGEGEKQMFVRCYLQQLLALKCDLPVDAVEVEGWTGGSE---GVREGGEDIRGLVRQMRAVAFLTAASWRREGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVWVNGKLLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNHANLFPLSSAHQLEDERIRKVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTLQYYFQGILAPAVVVIQHRHGPPSVPRFSSSSSLASTIMTALTSTSTGHQSLPPSSLGPIDVQHYRVVKSLYDGPEVPNVRDDIKKALLLPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVAIHLQAFTLSAQLKIRELVEDTPSMVAFSTARSALQKEGLLFVVEVGEVLSPELRSRASLVL 902 +V ++++ + + R + L E R + +L+NA R+LG L ++ F+ PP + R+T+ L + ++ S + P+L LL+ + G + +V ++ T W L GY+ E+ K LG L F S L G S + HF P SLYL G AG GKSS + ++ A+ AAI DP + VRFVKQNLNKP L+ E+ LR NNNDLSVMSIIQGRR T +Q+KPGLV V LEE+P A+ + G++++ LL+ RFSG + GIS I+ + TSNY L P+L L+ L +F++L V V + RE F YL Q + + W G E V G D R LVR +R ++F HV L+ + NL+ ++ + + D R + L +YF LAPAV++ S L ++ L H L ID Y+++KSLYD + PN+RDDI + + VA+ L + AQL IRE++ED+PS+ AFST RSAL K+GLLF V V ++PE+ SRASLV+ Sbjct: 270 IVSQLVSKLTDIDHSLRTDQLMHEYNRITYENCTLSNACLQRWLGRKSNNPNSWQLEEVFFKSSPPNRYLPKYERITMHLIDKHSNERRATSNNSNFVFLPSLSKLLQTETHVANQTTGVKTIVDNMICTTWECLLRDGYYVDERRKELLGLELRKFYESGLMAGRDGSMPLLLNGHFQPTYSLSLYLHGTAGAGKSSLVRNIVPAINAAIAKHCDPELLVRFVKQNLNKPFKTLQLEMDLRANNNDLSVMSIIQGRRMTLAQSKPGLVFVALEEMPSNVEGADPNQ-----------------------------GEVSK-----LLSMRFSG-------------------RKGDFKEGGGNIPRNSAKRGISGDATIITVLTSNYHLEKPSLEALQRLEMFKNLKVVEVAPVSGKYRE--------EFALSYLSQRV---------GQSLAPWNGSLEIDLNVPCGSGDTRPLVRYLRMLSFYV------------------------------------------HV------LMLQSKQHSPSTSSIKVDVDYNTSNNITTVTTNSQSMQLTLGSFHNLYAMTPS--IIDSRASNTI-------------------------------------ARLQSLHPTLRNPMELSQILDFYFAKTLAPAVIL-------------SHDKQLIHNLINLLGEADGVHVIL------DIDPTSYKMMKSLYDASDTPNLRDDILQII-------------------------------HGDGRASAASSYSNSTLVAVELTCHSTDAQLCIREIIEDSPSLTAFSTERSALYKDGLLFGVCVDGEITPEIESRASLVI 919
BLAST of NO06G00390 vs. NCBI_GenBank
Match: KOO29650.1 (hypothetical protein Ctob_008264 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 156.8 bits (395), Expect = 3.300e-34 Identity = 157/439 (35.76%), Postives = 213/439 (48.52%), Query Frame = 0 Query: 95 LARHSSLANALFLRFLGSTRLALSDITFRPPPPGVGGRARLTLVLWEPSLH--QSKPPPILLFPALHVLLREGGREGGAEGLVALLLQTFWRQLSVCGYFPSEKMKAALGPALAVFVASSL-GGGGQTSVLAHFSPRRPFSLYLEGKAGVGKSSFLAHMASALGAAIGDCFDPRMDVRFVKQNLNKPLLELERELSLRPNNNDLSVMSIIQGRRQTFSQTKPGLVVVGLEEVP--PPEGWAEGGREGXXXXXXXXXXXXXXXXXXXXXXXXXXAGKITQLPTLSLLADRFSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYQGRGGISTHTEILCIFTSNYPLLPPALALLRSLPLFEHLVCVTVEGLGEGGREGGGEGEKQMFVRCYLQQLLALKCDLPVDAVEVEGWTGGSEGVREGGEDIRGLVRQMRAVA 529 LA HSSL+NA RF T + + D T P R RL+++L++ S+H Q +P PAL L+RE E ++ + A L WR+L Y+PS++++A+L P L + S L G + A P+ P LYL G AG GKSS + + AL A + P + FVKQNLNKP+ L+ EL RPNNNDLSV+ +++ R+ S T+P L+++ LEE+P XXXXXXXXXXXXXXXXXXXXXXXXXX TQL LLA+RF + H +++ FTSNY L A A L++ LF L CVT++ +G R G + + L D + G + G D+R LVR +RAVA Sbjct: 109 LATHSSLSNACLARFCEETGVQVQDATLVTSPH--PSRVRLSVLLYDKSVHDAQQRPRSFAWIPALRRLMREPDVELLSQAMTARL----WRELRWQQYYPSDEIRASLEPCLHRWFRSCLIDRNGALRLRACLRPQTPICLYLHGAAGSGKSSIVRALLPALSATVRAFLHPELLGAFVKQNLNKPVAHLDLELQRRPNNNDLSVVHVVEMAREPLSATEPRLLLLALEEMPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQLAVAKLLAERFR---------------------------------------KSAAHPDLIVCFTSNYTLCDAAAAALKACTLFASLECVTIQPVGGAQRAALGGAMLRTLIAEGLASAEHGAPDRAPPSAASNECLGIDMRLDLGVGDVRPLVRLLRAVA 502
BLAST of NO06G00390 vs. NCBI_GenBank
Match: OEU08434.1 (hypothetical protein FRACYDRAFT_271686 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 73.9 bits (180), Expect = 2.800e-9 Identity = 49/140 (35.00%), Postives = 63/140 (45.00%), Query Frame = 0 Query: 762 IDVQHYRVVKSLYDGPEVPNVRDDIKKALLLPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVAIHLQAFTLSAQLKIRELVEDTPSMVAFSTARSALQKEGLLFVVEVGEVLSPELRSRASLVL 902 I+ Q Y++VKSLYD +PN+RDDI K VA+ L T +QL RE++ED+PSM AFST +SAL K GLLF + V +PE+ SR S VL Sbjct: 57 INTQTYKMVKSLYDPKNIPNLRDDILKV--------------------------------------------DRGALVAVELDCPTEDSQLCSREMIEDSPSMTAFSTTKSALHKSGLLFAIHVEGEATPEIMSRVSFVL 152 The following BLAST results are available for this feature:
BLAST of NO06G00390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 5
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G00390 ID=NO06G00390|Name=NO06G00390|organism=Nannochloropsis oceanica|type=gene|length=3800bpback to top protein sequence of NO06G00390.1 >NO06G00390.1-protein ID=NO06G00390.1-protein|Name=NO06G00390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=914bpback to top Synonyms
Publications
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