NO05G04660, NO05G04660 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G04660 vs. NCBI_GenBank
Match: EWM27973.1 (Protein of unknown function DUF1499 [Nannochloropsis gaditana]) HSP 1 Score: 307.0 bits (785), Expect = 6.700e-80 Identity = 147/185 (79.46%), Postives = 165/185 (89.19%), Query Frame = 0
Query: 126 LFPILLLPLSSAQAFPGLEDCTSESNPSFTIVTCARSGIDPVTSRPQKCLSAENCISSSSVQSASKYMSPWVYGGAAADTPSAWLSLVRAVEAQEGVKLVEVDNGSKQYYLRAEVGSKVPPGGIDDIEFLMSPKDGLVFFRSASRQMAFLYPLTQPVGDGGSIKKRIEAIQKVVGWSTVEDYYAF 311
L P+ +LP SA AFPGLEDCTSESNPSFTIVTC R GIDPV RP++CLSAENCISS+SV + SKYMSPWV+ GA D P+AWLSLVRAVEAQEG+K+VE+DNGSKQYYLRAE SKVPPGG+DD+EFL+SPKDGLVFFRSASRQMAFLYPLTQPVGDGGSIKKR+E IQK VGWSTVE++Y +
Sbjct: 78 LLPLTVLP-PSACAFPGLEDCTSESNPSFTIVTCDRFGIDPVAGRPKRCLSAENCISSTSVNNPSKYMSPWVFNGAGEDVPTAWLSLVRAVEAQEGLKVVEIDNGSKQYYLRAEAPSKVPPGGVDDLEFLLSPKDGLVFFRSASRQMAFLYPLTQPVGDGGSIKKRLETIQKAVGWSTVEEFYDY 261
BLAST of NO05G04660 vs. NCBI_GenBank
Match: XP_005855725.1 (hypothetical protein NGA_0606900 [Nannochloropsis gaditana CCMP526] >EKU20647.1 hypothetical protein NGA_0606900 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 213.0 bits (541), Expect = 1.300e-51 Identity = 97/118 (82.20%), Postives = 109/118 (92.37%), Query Frame = 0
Query: 193 MSPWVYGGAAADTPSAWLSLVRAVEAQEGVKLVEVDNGSKQYYLRAEVGSKVPPGGIDDIEFLMSPKDGLVFFRSASRQMAFLYPLTQPVGDGGSIKKRIEAIQKVVGWSTVEDYYAF 311
MSPWV+ GA D P+AWLSLVRAVEAQEG+K+VE+DNGSKQYYLRAE SKVPPGG+DD+EFL+SPKDGLVFFRSASRQMAFLYPLTQPVGDGGSIKKR+E IQK VGWSTVE++Y +
Sbjct: 1 MSPWVFNGAGEDVPTAWLSLVRAVEAQEGLKVVEIDNGSKQYYLRAEAPSKVPPGGVDDLEFLLSPKDGLVFFRSASRQMAFLYPLTQPVGDGGSIKKRLETIQKAVGWSTVEEFYDY 118
BLAST of NO05G04660 vs. NCBI_GenBank
Match: CBN77934.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 142.1 bits (357), Expect = 2.900e-30 Identity = 75/171 (43.86%), Postives = 106/171 (61.99%), Query Frame = 0
Query: 136 SAQAFPGLE----DCTSESNPSFTIVTCARSGIDPVTSRPQKCLSAENCISSSSVQSASKYMSPWVYGGAAADTPSAWLSLVRAVEAQEGVKLVEVDNGSKQYYLRAEVGSKVPPGGIDDIEFLMSPKDGLVFFRSASRQMAFLYPLTQPVGDGGSIKKRIEAIQKVVGWS 303
S A PG+ CT+ +NPS+++V+C R+G+D R C S+ENC+S+S+V+ K SPW Y D +A+ SLV AVE + VD + +Y+ AE SKVPPG +D +EFL+ P+D +V +RS SR FLYPL QPV D G IK+R+E I+ +GW+
Sbjct: 93 SLAADPGMPGSGLGCTTSTNPSYSLVSCDRTGLDR-NGRLLGCSSSENCLSTSAVKVPGKLGSPWEYAMRTDDADTAFASLVHAVERTSEATMKIVDR--EGHYILAEFPSKVPPGSVDSVEFLVKPEDQIVLYRSVSRDTLFLYPLQQPVSDQGKIKERLEGIRNDLGWN 260
BLAST of NO05G04660 vs. NCBI_GenBank
Match: XP_005536334.1 (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >BAM80048.1 hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 122.1 bits (305), Expect = 3.100e-24 Identity = 60/132 (45.45%), Postives = 84/132 (63.64%), Query Frame = 0
Query: 174 CLSAENCISSSSVQSASKYMSPWVYGGAAADTPSAWLSLVRAVEAQEGVKLVEVDNGSKQYYLRAEVGSKVPPGGIDDIEFLMSPKDGLVFFRSASRQMAFLYPLTQPVGDGGSIKKRIEAIQKVVGWSTVE 306
C S ENC+SSS++ S KY +PW Y AW +L AV A+ GV + EVD +YL A S PPGG DDIEFL+ P++ LV +RS S+++ ++YP QP+GD GS +KR+E I+ +GW T++
Sbjct: 74 CGSEENCVSSSAIGSPVKYGAPWSYATVTDSPREAWSALEAAVRAEPGVAVREVDG----FYLHATAPSVFPPGGEDDIEFLLRPEEKLVLYRSRSQKVTYIYPFHQPLGDFGSNRKRLERIRDRLGWQTLD 201
BLAST of NO05G04660 vs. NCBI_GenBank
Match: OEU17638.1 (hypothetical protein FRACYDRAFT_268761 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 114.4 bits (285), Expect = 6.400e-22 Identity = 65/164 (39.63%), Postives = 94/164 (57.32%), Query Frame = 0
Query: 142 GLEDCTSESNPSFTIVTC-ARSGIDPVTSRPQKCLSAENCISSSSVQSASKYMSPWVYGGAAADTPSAWLSLVRAV-EAQEGVKLVEVDNGSKQYYLRAEVGSKVPPG--GIDDIEFLMSPKDGLVFFRSASRQMAFLYPLTQPVGDGGSIKKRIEAIQKVVGW 302
G C + +NPS TIVTC + R K + EN +S+SSV++ S++ PW Y D AW SL AV + +++E+ + YL A V + PPG G+DD+EFL+ P D ++ +RSASR F+YPLTQPV D S KR++ I++ +GW
Sbjct: 152 GRRGCITNTNPSRTIVTCRGDMQSNNPDGRLSKVSATENGVSTSSVKNPSRFSPPWSYLTETQDAKRAWKSLQSAVLNVDQSCQIIELTDN----YLHAIVPTTSPPGIEGVDDLEFLIRPDDNVILYRSASRTSVFVYPLTQPVSDNNSNLKRLQKIRQSLGW 311
BLAST of NO05G04660 vs. NCBI_GenBank
Match: XP_005818982.1 (hypothetical protein GUITHDRAFT_45248, partial [Guillardia theta CCMP2712] >EKX32002.1 hypothetical protein GUITHDRAFT_45248, partial [Guillardia theta CCMP2712]) HSP 1 Score: 114.0 bits (284), Expect = 8.400e-22 Identity = 59/144 (40.97%), Postives = 89/144 (61.81%), Query Frame = 0
Query: 168 TSRPQKCLSAENCISSSSVQSASKYMSPWVYGGAAADTPSAWLSLVRAVEAQEGVKLVEVDNGSKQYYLRAEVGSKVPPGGIDDIEFLMSPKDGLVFFRSASRQMAFLYPLTQPVGDGGSIKKRIEAIQKVVGWSTVEDYYAFD 312
T R C + NC+S S++++ S++ +PW Y + D AW +L +AV+ +++VE D+G K YL A SKVP G+DD+EFL+ P + +V +RSASR A++YP + DGG+ KKR++ I +GW VE YA D
Sbjct: 2 TQRLYACQTLANCVSVSAIKNPSQFGAPWDYTSSTKDAEEAWKALKKAVKEDATLRVVEEDDGKK--YLHAITPSKVPQKGVDDVEFLLIPSEKIVTYRSASRSNAYVYPYQTAISDGGNNKKRMKEILARLGW--VELNYAGD 141
BLAST of NO05G04660 vs. NCBI_GenBank
Match: XP_002178425.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50090.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 112.1 bits (279), Expect = 3.200e-21 Identity = 64/174 (36.78%), Postives = 101/174 (58.05%), Query Frame = 0
Query: 138 QAFP---GLEDCTSESNPSFTIVTCARSGI-DPVTSRPQKCLSAENCISSSSVQSASKYMSPWVYGGAAADTPSAWLSLVRAV-EAQEGVKLVEVDNGSKQYYLRAEVGSKVPPG-----GIDDIEFLMSPKDGLVFFRSASRQMAFLYPLTQPVGDGGSIKKRIEAIQKVVGW 302
Q FP G C++ S+P T+VTC + + +R + +N +S+S+V++ S++ PW Y +D AW SL AV + VK++ V + YL A V + PPG G+DD+EF++ P+D ++ +RSASR F+YPLTQPV DG + KR++ I+ ++GW
Sbjct: 78 QEFPTSAGRRGCSTVSDPGKTVVTCTGELLANNKENRLSSIPATQNGVSTSAVKNPSRFSPPWSYLTETSDGAKAWQSLQTAVLQVDSNVKVLNVTD----TYLHATVPTAQPPGLSGEAGLDDLEFVLRPEDKVILYRSASRTAIFVYPLTQPVSDGNTNLKRLQKIRNILGW 247
BLAST of NO05G04660 vs. NCBI_GenBank
Match: CEL91995.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 108.6 bits (270), Expect = 3.500e-20 Identity = 63/155 (40.65%), Postives = 89/155 (57.42%), Query Frame = 0
Query: 157 VTCARSGIDPVTSRPQKCLSAENCISSSSVQSASKYMSPWVYGGAAADTPS----AWLSLVRAVEAQEGVKLVEVDNGSKQYYLRAEVGSKVPPGGIDDIEFLMSPKDGLVFFRSASRQMAFLYPLTQPVGDGGSIKKRIEAIQKVVGWSTVEDY 308
++C S D R ++C + +NC+SSS+V+ +Y+ PW Y G+ D S AW LV+ V + VD+ ++ YLRAEV S + PGG DDIEFLM P L S SR F++P T P+GD S +KR+E I++V+GW V Y
Sbjct: 59 ISCRHS--DLKDGRLRECRATQNCVSSSAVRVPERYVPPWSYEGSFEDRQSDPRAAWNKLVQTVTFWPEATVKRVDD--ERLYLRAEVPSFI-PGGYDDIEFLMKPDLKLCLASSRSRDTIFVFPFTTPLGDNDSNRKRLEEIRQVLGWPAVTTY 208
BLAST of NO05G04660 vs. NCBI_GenBank
Match: GAX15992.1 (hypothetical protein FisN_22Hu151 [Fistulifera solaris]) HSP 1 Score: 105.5 bits (262), Expect = 3.000e-19 Identity = 68/183 (37.16%), Postives = 101/183 (55.19%), Query Frame = 0
Query: 128 PILLLPLSSAQAFP---GLEDCTSESNPSFTIVTCARSGI--DPVTSRPQKCLSAENCISSSSVQSASKYMSPWVYGGAAADTPSAWLSLVRA-VEAQEGVKLVEVD---NGSKQYYLRAEVGSKVPPGGIDDIEFLMSPKDGLVFFRSASRQMAFLYPLTQPVGDGGSIKKRIEAIQKVVGW 302
P ++ + + FP G + C + S+PS T VTC + P +R + EN +S+S+V++ S++ +PW Y A+ SL A ++ + V++ VD S YYL A + S P G DDIEF++ P+D L FRSASR F+YPLTQPV DG +KR+E I+ +GW
Sbjct: 8 PFIVPSKAHGEDFPTSAGRKGCKTVSDPSRTAVTCTGDVLLAIPNNTRLSGISATENGVSTSAVKNPSRFAAPWNYSTETDQASKAFSSLQAALLKVEPTVEIDTVDTNFRSSGYYYLHATLSS--PATGTDDIEFIIRPEDRLALFRSASRTSVFVYPLTQPVTDGLRNRKRMEKIRDELGW 188
BLAST of NO05G04660 vs. NCBI_GenBank
Match: CBJ27602.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 97.8 bits (242), Expect = 6.200e-17 Identity = 54/130 (41.54%), Postives = 77/130 (59.23%), Query Frame = 0
Query: 174 CLSAENCISSSSVQ--SASKYMSPWVYGGAAADTPSAWLSLVRAVEAQEGVKLVEVDNGSKQYYLRAEVGSKVPPGGIDDIEFLMSPKDGLVFFRSASRQMAFLYPLTQPVGDGGSIKKRIEAIQKVVGW 302
C + NC+SS+S + +YM+PW Y G + D A+ L++AVE +KLV+ D + Y+ A S VPP G D +EFL P DGLV FRS S + + P+ VGDG S + R+EA++K +GW
Sbjct: 86 CPTEGNCVSSTSFKLVMQGRYMAPWSYTGDSKDASVAFAKLLKAVENDPQLKLVDQD--ADALYISAMAKSAVPPDGFDKVEFLFKPSDGLVSFRSKSLKNVYAGPVI--VGDGNSNRNRLEALRKKLGW 211 The following BLAST results are available for this feature:
BLAST of NO05G04660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 11
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G04660 ID=NO05G04660|Name=NO05G04660|organism=Nannochloropsis oceanica|type=gene|length=1220bpback to top protein sequence of NO05G04660.1 >NO05G04660.1-protein ID=NO05G04660.1-protein|Name=NO05G04660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=312bpback to top Synonyms
Publications
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