NO05G03730, NO05G03730 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G03730 vs. NCBI_GenBank
Match: EWM27985.1 (ribosomal rna-processing protein 7 [Nannochloropsis gaditana]) HSP 1 Score: 247.3 bits (630), Expect = 6.100e-62 Identity = 171/300 (57.00%), Postives = 195/300 (65.00%), Query Frame = 0 Query: 1 MLVKGYNVLAVPLGEDTSSPFSSFLYVRQHSSKSGEDLPQGRTLFLANVPARTGVDIGTYLREAFARYGEVEEVRVKDHPDDEIAVSLTSKCAIGFIVFRTSKGLKAVMSASGDASRLSPPSRSVLLPGYKPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKLIRRFRARLPQGKVLQEEVDGYMASFEAAEAEEKRKRFAAATTPDADGFVTVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELKNFYAHQMREAKREQLARLRTRFEEDKARIEKMKAARKFKPFG 301 M VKGY V+ VPL +TSSPFS F+YVRQH++K E+LP GRTLFLANVPA+ GVD+ YL+EAFA++GEVE VRVK+ D++ S T K AI F++FR+SKG+K+VM+A SRL PPS L YKPSK Q L+RRFRA+ AA+ PDADGFVTV+Y XXXXXXXXXXXXXXXXXXXXXXXXXXELKNFYAHQMREAKREQLARLRTRFEEDKARIEKMKAARKFKPFG Sbjct: 45 MHVKGYKVITVPLNNNTSSPFSRFVYVRQHNNKGEEELPHGRTLFLANVPAQIGVDVHMYLKEAFAKFGEVELVRVKESSDNDAMSSYTVKSAIAFVIFRSSKGVKSVMNAPFGESRLPPPSVKASLAEYKPSKRQRKLHSQYQDTANETERKEAMAAALEEDVQSLVRRFRAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAASKPDADGFVTVAYGKKRRRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXELKNFYAHQMREAKREQLARLRTRFEEDKARIEKMKAARKFKPFG 344
BLAST of NO05G03730 vs. NCBI_GenBank
Match: XP_010408972.1 (ribosomal RNA-processing protein 7 homolog A [Corvus cornix cornix]) HSP 1 Score: 95.5 bits (236), Expect = 3.000e-16 Identity = 91/307 (29.64%), Postives = 122/307 (39.74%), Query Frame = 0 Query: 5 GYNVLAVPLGEDTSSPFSSFLYVRQHSSKSGEDL--PQGRTLFLANVPARTGVDIGTYLREAFARYGEVEEVRVKDHP-DDEIAVSLTSK---------CAIGFIVFRTSKGLKAVMSASGDASRLSPPSRSVLLPGYKPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKLIRRFRARLPQGKVLQEEVDGYMASFEAAEAEEKRKRFAAATTPDADGFVTVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELKNFYAHQMREAKREQLARLRTRFEEDKARIEKMKAARKFKPF 300 GY LAV E SP L V++H + G D P RTLF+ NVP G D L F+R G V+ V + D P E LTSK + ++VFR G++A + S + L + G K I + A + K L+ EVD YM ++ AEE+ K PD +G+V V+ EL NFYA Q RE+KRE +A+LR +FEEDK RI M+A RKF+P+ Sbjct: 15 GYTALAVKFAERQRSPHC--LLVKEHQVREGADTAHPPRRTLFVLNVPPYCGPD---SLSRLFSRCGHVQSVDICDKPGPGEKKDKLTSKFFDHKTVKGFQVAYVVFRKPAGVQAAKALSQEGPLLISTESHPVKTG----------------------------------ISKWIASYEASIVDPKELKAEVDAYMQDYDKKMAEEEAKAAKEEGVPDEEGWVKVT-------RKGRKPGLPRTEAANLRVLEKEKQKRARKELLNFYAWQHRESKREHIAQLRKKFEEDKQRIALMRAQRKFRPY 275
BLAST of NO05G03730 vs. NCBI_GenBank
Match: XP_005527743.1 (PREDICTED: ribosomal RNA-processing protein 7 homolog A [Pseudopodoces humilis]) HSP 1 Score: 93.2 bits (230), Expect = 1.500e-15 Identity = 90/307 (29.32%), Postives = 121/307 (39.41%), Query Frame = 0 Query: 5 GYNVLAVPLGEDTSSPFSSFLYVRQHSSKSGEDL--PQGRTLFLANVPARTGVDIGTYLREAFARYGEVEEVRVKDHP-DDEIAVSLTSK---------CAIGFIVFRTSKGLKAVMSASGDASRLSPPSRSVLLPGYKPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKLIRRFRARLPQGKVLQEEVDGYMASFEAAEAEEKRKRFAAATTPDADGFVTVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELKNFYAHQMREAKREQLARLRTRFEEDKARIEKMKAARKFKPF 300 GY LAV E SP L V++H + G D P RTLF+ NVP G D L F+R G V+ V + D P E LTSK + ++VFR + ++A + S + L + G K I + A + K L+ EVD YM ++ AEE+ K PD +G+V V+ EL NFYA Q RE KRE +A+LR +FEEDK RI M+A RKF+P+ Sbjct: 15 GYTALAVKFAERQRSPHC--LLVKEHQVREGADTAHPPRRTLFVLNVPPYCGPDA---LSRLFSRCGHVQSVDMCDKPGPGEKKDKLTSKFFDHKTPKGFQVAYVVFRKAAAVQAAKALSKEGPLLISTKSHPVKTG----------------------------------ISKWIASYEASIVNPKELKAEVDAYMQDYDKKMAEEEAKAAKEEGVPDEEGWVKVT-------RKGRKPGLPWTEAANLRVLEKEKQKRARKELLNFYAWQHRETKREHIAQLRKKFEEDKQRIALMRAQRKFRPY 275
BLAST of NO05G03730 vs. NCBI_GenBank
Match: XP_015482715.1 (PREDICTED: ribosomal RNA-processing protein 7 homolog A [Parus major]) HSP 1 Score: 93.2 bits (230), Expect = 1.500e-15 Identity = 90/307 (29.32%), Postives = 121/307 (39.41%), Query Frame = 0 Query: 5 GYNVLAVPLGEDTSSPFSSFLYVRQHSSKSGEDL--PQGRTLFLANVPARTGVDIGTYLREAFARYGEVEEVRVKDHP-DDEIAVSLTSK---------CAIGFIVFRTSKGLKAVMSASGDASRLSPPSRSVLLPGYKPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKLIRRFRARLPQGKVLQEEVDGYMASFEAAEAEEKRKRFAAATTPDADGFVTVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELKNFYAHQMREAKREQLARLRTRFEEDKARIEKMKAARKFKPF 300 GY LAV E SP L V++H + G D P RTLF+ NVP G D L F+R G V+ V + D P E LTSK + ++VFR + ++A + S + L + G K I + A + K L+ EVD YM ++ AEE+ K PD +G+V V+ EL NFYA Q RE KRE +A+LR +FEEDK RI M+A RKF+P+ Sbjct: 15 GYTALAVKFAERQRSPHC--LLVKEHQVREGADTAHPPRRTLFVLNVPPYCGPDA---LSRLFSRCGHVQSVDMCDKPGPGEKKDKLTSKFFDHKTPKGFQVAYVVFRKAAAVQAAKALSKEGPLLISTKSHPVKTG----------------------------------ISKWIASYEASIVNPKELKAEVDAYMQDYDKKMAEEEAKAAKEEGVPDEEGWVKVT-------RKGRKPGLPRTEAANLRVLEKEKQKRARKELLNFYAWQHRETKREHIAQLRKKFEEDKQRIALMRAQRKFRPY 275
BLAST of NO05G03730 vs. NCBI_GenBank
Match: XP_022305800.1 (ribosomal RNA-processing protein 7 homolog A-like [Crassostrea virginica]) HSP 1 Score: 93.2 bits (230), Expect = 1.500e-15 Identity = 82/309 (26.54%), Postives = 128/309 (41.42%), Query Frame = 0 Query: 1 MLVKGYNVLAVPLGEDTSSPFSSFLYVRQHSSKSGEDLPQGRTLFLANVPARTGVDIGTYLREAFARYGEVEEVRVKDHPDDEIAVSLTSK----------CAIGFIVFRTSKGLKAVMSASGDASRLSPPSRSVLLPGYKPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKLIRRFRARLPQGKVLQEEVDGYMASFEAAEAEEKRKRFAAATTPDADGFVTVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELKNFYAHQMREAKREQLARLRTRFEEDKARIEKMKAARKFKPF 300 ++++G+ V+ E S LYV++ + + G + P+ RTLF+AN+P +++ F +G+V +V + D P E +SK + +I+F+ + L V S D +L G K K ++ + + LQEE+D YM +++ + EKR PD DG+VTV+ ELKNFYA QMRE KR+++A LR +FEEDK RI MKA+RKF+P+ Sbjct: 8 VVIEGFTVIQTSFQE--SGKIGHSLYVKE-NERRGANRPKDRTLFVANIPPYC---TEKSIQQVFKTFGDVMKVYLYDKPHSEDPPPNSSKYFPDRSKVKGFKVAYIIFKKAAALNKVKSHPYDKVVSLSSDEVPILTGIK----------------------------------KWQAEYQQNVCNPQRLQEEIDKYMTAYDEEQEREKRLALEQEGVPDEDGWVTVT-------RHGKNKGAPRTETMEKKVTSKDKKRQAEKELKNFYAFQMRETKRDKIAELRKKFEEDKQRISLMKASRKFRPY 269
BLAST of NO05G03730 vs. NCBI_GenBank
Match: EKC23935.1 (Ribosomal RNA-processing protein 7-like protein A [Crassostrea gigas]) HSP 1 Score: 92.4 bits (228), Expect = 2.500e-15 Identity = 82/309 (26.54%), Postives = 123/309 (39.81%), Query Frame = 0 Query: 1 MLVKGYNVLAVPLGEDTSSPFSSFLYVRQHSSKSGEDLPQGRTLFLANVPARTGVDIGTYLREAFARYGEVEEVRVKDHPDDEIAVSLTSK----------CAIGFIVFRTSKGLKAVMSASGDASRLSPPSRSVLLPGYKPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKLIRRFRARLPQGKVLQEEVDGYMASFEAAEAEEKRKRFAAATTPDADGFVTVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELKNFYAHQMREAKREQLARLRTRFEEDKARIEKMKAARKFKPF 300 +++ G+ V+ E S LYV++ S+ G P+ RTLF+ NVP +R F+ +G+V +V + D P E S + +I+F+ + L S D P+ + +L G K K ++ + LQ E+D YM ++ + EKR PD DG+VTV+ ELKNFYA QMRE+KR+++A LR +FEEDK RI MKA+RKF+P+ Sbjct: 51 VVIDGFTVIQTKFQE--SGKIGHSLYVKEAQSR-GSSQPKDRTLFVVNVPPYC---TQASIRSVFSTFGDVTKVYLYDRPHKEDPPPTKSTYFPDRPEPKGFKVAYIIFKKAASLAKATSHPYDKVLQLSPAENPILTGIK----------------------------------KWQMEYQQNVCNPTALQAEIDKYMTHYDEEQEREKRLALEQEGVPDKDGWVTVT-------RHGKNKGAPRTETMEKKITSKNKKKQAEKELKNFYAFQMRESKRDKIAELRKKFEEDKQRISFMKASRKFRPY 312
BLAST of NO05G03730 vs. NCBI_GenBank
Match: XP_011446230.1 (PREDICTED: ribosomal RNA-processing protein 7 homolog A [Crassostrea gigas]) HSP 1 Score: 92.4 bits (228), Expect = 2.500e-15 Identity = 82/309 (26.54%), Postives = 123/309 (39.81%), Query Frame = 0 Query: 1 MLVKGYNVLAVPLGEDTSSPFSSFLYVRQHSSKSGEDLPQGRTLFLANVPARTGVDIGTYLREAFARYGEVEEVRVKDHPDDEIAVSLTSK----------CAIGFIVFRTSKGLKAVMSASGDASRLSPPSRSVLLPGYKPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKLIRRFRARLPQGKVLQEEVDGYMASFEAAEAEEKRKRFAAATTPDADGFVTVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELKNFYAHQMREAKREQLARLRTRFEEDKARIEKMKAARKFKPF 300 +++ G+ V+ E S LYV++ S+ G P+ RTLF+ NVP +R F+ +G+V +V + D P E S + +I+F+ + L S D P+ + +L G K K ++ + LQ E+D YM ++ + EKR PD DG+VTV+ ELKNFYA QMRE+KR+++A LR +FEEDK RI MKA+RKF+P+ Sbjct: 8 VVIDGFTVIQTKFQE--SGKIGHSLYVKEAQSR-GSSQPKDRTLFVVNVPPYC---TQASIRSVFSTFGDVTKVYLYDRPHKEDPPPTKSTYFPDRPEPKGFKVAYIIFKKAASLAKATSHPYDKVLQLSPAENPILTGIK----------------------------------KWQMEYQQNVCNPTALQAEIDKYMTHYDEEQEREKRLALEQEGVPDKDGWVTVT-------RHGKNKGAPRTETMEKKITSKNKKKQAEKELKNFYAFQMRESKRDKIAELRKKFEEDKQRISFMKASRKFRPY 269
BLAST of NO05G03730 vs. NCBI_GenBank
Match: XP_013389988.1 (ribosomal RNA-processing protein 7 homolog A [Lingula anatina]) HSP 1 Score: 91.3 bits (225), Expect = 5.600e-15 Identity = 76/309 (24.60%), Postives = 126/309 (40.78%), Query Frame = 0 Query: 1 MLVKGYNVLAVPLGEDTSSPFSSFLYVRQHSSKSGEDL-PQGRTLFLANVPARTGVDIGTYLREAFARYGEVEEVRVKDHPDDEI---------AVSLTSKCAIGFIVFRTSKGLKAVMSASGDASRLSPPSRSVLLPGYKPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKLIRRFRARLPQGKVLQEEVDGYMASFEAAEAEEKRKRFAAATTPDADGFVTVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELKNFYAHQMREAKREQLARLRTRFEEDKARIEKMKAARKFKPF 300 +++ G+ V+ + L + S +Y+++HS + + P+ RTLF+ N+P + L+ F+ G++E + ++ P + + +IVF T +K D R+ S +L G K K + ++A LP LQ+E+D YM F+ EE + PD +G+VTV+ EL NFYA Q+RE+K EQ+A+LR +FEEDK +I M+A+RKF+P+ Sbjct: 5 VVINGFTVIPLKLNKQCKS--CHHVYLKEHSVRETDAAKPKDRTLFILNLPPYCNEEC---LKRLFSDCGKIENIHIQQKPSSSAPEVKNRFFKSAKDIEGFRVAYIVFHTPAAVKKAKQFKFDPPRILSTDESPVLTGMK----------------------------------KWCQEYKASLPNVHALQKEIDAYMEEFDKKIQEEAAQAKEEEGVPDDEGWVTVT-------RHSKNKGVPRTEAQEKRVTQREKKKRKEKELLNFYAFQVRESKMEQIAKLRQKFEEDKQKISLMRASRKFRPY 267
BLAST of NO05G03730 vs. NCBI_GenBank
Match: XP_014738051.1 (PREDICTED: ribosomal RNA-processing protein 7 homolog A [Sturnus vulgaris]) HSP 1 Score: 90.9 bits (224), Expect = 7.300e-15 Identity = 92/300 (30.67%), Postives = 121/300 (40.33%), Query Frame = 0 Query: 9 LAVPLGEDTSSPFSSFLYVRQHSSKSGEDL--PQGRTLFLANVPARTGVDIGTYLREAFARYGEVEEVRVKDHP-DDEIAVSLTSKCAIGFIVFRTSKGLKAVM------SASGDASRLSPPSRSVLLPGYKPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKLIRRFRARLPQGKVLQEEVDGYMASFEAAEAEEKRKRFAAATTPDADGFVTVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELKNFYAHQMREAKREQLARLRTRFEEDKARIEKMKAARKFKPF 300 LAV E SP L V++H + G D P RTLF+ NVP G D L + F+R G V+ V + D P E LTSK F +T+KG + +A A LS ++ G P K K I + A + K L+ EVD YM ++ AEE+ K PD +G+V V+ EL NFYA Q RE KRE +A+LR +FEEDK RI M+A RKF+P+ Sbjct: 11 LAVKFAERQRSPHC--LLVKEHQVREGTDTAHPPRRTLFVLNVPPYCGPD---SLSKLFSRCGHVQSVDICDKPGPGEKKDKLTSK----FFDHKTAKGFQVAYVVFRKPAAVQAAKALSQQGPLLISTGSHPVK---------------------------TGISKWIASYEASIVDPKELKAEVDAYMQDYDKKMAEEEAKAAKEEGVPDEEGWVKVT-------RKGRKPGLPRTEAANLRVLEKEKQKRARKELLNFYAWQHRETKREHIAQLRKKFEEDKQRIALMRAQRKFRPY 267
BLAST of NO05G03730 vs. NCBI_GenBank
Match: XP_017683125.1 (PREDICTED: ribosomal RNA-processing protein 7 homolog A [Lepidothrix coronata]) HSP 1 Score: 90.9 bits (224), Expect = 7.300e-15 Identity = 89/307 (28.99%), Postives = 119/307 (38.76%), Query Frame = 0 Query: 5 GYNVLAVPLGEDTSSPFSSFLYVRQHSSKSGEDL--PQGRTLFLANVPARTGVDIGTYLREAFARYGEVEEVRVKDHP------DDEIAVSLTSKCAIGF----IVFRTSKGLKAVMSASGDASRLSPPSRSVLLPGYKPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKLIRRFRARLPQGKVLQEEVDGYMASFEAAEAEEKRKRFAAATTPDADGFVTVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELKNFYAHQMREAKREQLARLRTRFEEDKARIEKMKAARKFKPF 300 GY LAV G SP L V++H + G D P RTLF+ NVP G D L F+R G V+ V + D P + + K GF +VFR G++A + S + L + G K I + A + K L+ EVD YM ++ AEE+ K PD +G+V V+ EL NFYA Q RE KRE +A+LR +FEEDK RI M+A RKF+P+ Sbjct: 15 GYTALAVKFGARQRSPHC--LLVKEHQVREGADTAHPPRRTLFVLNVPPYCGPD---SLSRLFSRCGHVQSVDICDKPGPGEKKEKPKSKFFNRKTITGFQVAYVVFRKPAGVQAAKALSQEGPLLISTETHPVKTG----------------------------------ISKWIASYEASVVDPKELKAEVDAYMQDYDKKMAEEEAKAAKEEGVPDEEGWVKVT-------RKGRKPGLPRTEAANLRVLEKEKQKRARKELLNFYAWQHRETKREHIAQLRKKFEEDKQRIALMRAQRKFRPY 275 The following BLAST results are available for this feature:
BLAST of NO05G03730 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G03730 ID=NO05G03730|Name=NO05G03730|organism=Nannochloropsis oceanica|type=gene|length=1296bpback to top protein sequence of NO05G03730.1 >NO05G03730.1-protein ID=NO05G03730.1-protein|Name=NO05G03730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=301bpback to top Synonyms
Publications
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