NO05G03390, NO05G03390 (gene) Nannochloropsis oceanica

Overview
NameNO05G03390
Unique NameNO05G03390
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5226
Alignment locationchr5:891539..896764 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:891539..896764 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO05G03390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G03390.1NO05G03390.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669934gene_3149Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G03390.1NO05G03390.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G03390 ID=NO05G03390|Name=NO05G03390|organism=Nannochloropsis oceanica|type=gene|length=5226bp
CGCGTCTGGCGAATGTGTCTTTTCGTGTGATTGTGAGAAGCACAGCGTAA
AGACGTGTGTACATGGAGTCTGCACGTGTCTATTTGACCTGCTCATGCGC
GGCGTGTTTTCAATGACACACTAGGGAGGGAGGGGGGGGGAGGAAGGGGA
GAGAGGGAGGAGGAATTGCTGGGAGGCTTTACGAGCGTTTCCGAACTCTT
CCCTGACGCACATAGGAGAGGTTTACCTGTTTGTGCCTCTGTAGGTTGAA
AAGGGGAAGGAGGAGGTGTGGGACTACTTGGGGTTGCAATTCCTGCCGCC
TTGCCTGCGCTGGGCTTGAGGGACGGGAGGGAAGGAGGGAAGAAGGAAAG
GAATGCAAGGGGAAGTAGAGCTCAAAGGATGGGACTCGGCGGCAAATAGA
GATCGAGACAAAAAGCGTGATAACCCTAACAAAGTGAGTGATGTAGAGAA
GACACGATGGGTCCTTTGGTGAGGATGCTCAGGAATTGTGAATCTGAATA
AGGGCTTGTGTGCGTGGACAAGGATGTAGCAGGTTTTAGCAAGCATGTTT
AATCATAACGACACACAATGAAGATCCATCAGCTTTAGTCACTACGTGGG
TACTTACAAAGGCGGAGGCGGTCGTGAAGATGCCAGTGGGGGCCTCATGA
AAAATGGTATCTTTCAGGGAAAGGTGGAAGATACCCTGTGAGTTGTGTCG
TAGTTACTTTTGAAAATTGATTGATTCTTTTGTCAGATCAATATTGGCCC
CGATATAGCCTTTTAATTTGTGGTTGGAAAGAGTGTGAGAACCTCCCCTC
TCTTTGCTGCAACCGGCACAGTTCATACCCGGAAAAAGCTCCAAATGCGT
ATATCTCGCTTTGCCGTACTTATCAGCACATTTCAATGTAAAATTCTGTA
TGGAAGAAAGGCAGTAATTTGAAGGAGTCTCCGGTTGTCGTGCTCGACCA
CGTCGTGCTTGAACCAGTGGTCTTTGGTCGTTGCAAACCCCACGCAGTAT
CTCACTCCTAAATCAAGCTAAGCACATCCCGCCAACCTGACAGAGTAGCT
TAAGTAGGATGCAAAGAATAATACCGGCAAAGATGCGGCGGTCATCATCA
TTCTCCGTGGCGCTTTCCTGTCTTCTAGCTCTGCCTATGATTGAGGTTAG
GACGACAAACATCATATACGTTCCAGAACAAGCAGCTCTCCTAGGAACAG
GCCAAACAGCGGAACCGTATGTTTGTTTGTGCCTTGGTGAGTGACAACCT
TGGGACGAGGGGCTTCGTATATGCAAACAAAAGGCGTGGCAAGTGTGTGT
TAATTTGAATTGTGGCTTGCATTATGGGCCTACGGGTGGTAGGGGGGAAC
GATGGGCTACTTTGCGTGGCCCCAACAAATAATCACGTGGCCCCAAAATA
TCTCCGGCCACACGTCCATGACCACAAATACATACCGAACGATTTCGGAG
CCTTTTTTGCTGCAAAAAGTGCCCGTAGGACTCGGTTGGGCTTGGTGCAG
GTGCATATATATATATATGTGCGTCATGTGCCTTTTGCTTTTTACAGGGT
TTGCTCTGCTTCTCAACCCCCCCAAAAAGCACCCTCTAATAGACGGCCCG
TGTTCTTTCGTTTATATGTGCAGCCCTTAAATGGAAGCGCCGAATTTGCT
ATTTAAGGGTTTTGGGGAGAGTTGAACACACCCCCTAATTGCACATTATT
ATTATTGCACATTATTGCACAATTAATGTGCGTGCGTATTTTTGCGATCC
GAGCGGCTGTCCAGGCTTTAAAGGAACCTGCCAGGGTCCTTTAAATCGCA
TTTGGGGATGACTTGAAAGTGCGATTGCGAGCTTGCTTGTGAGCAGAGGC
GCCAGAATCGCAGGTCAAGGGCCACAGCAATGGGAAGACTGCTTGCCTCA
CGTAACCACACCACACCACTATGTACACGCCCCTCGACAGGGGCAAGATA
CCAGATGGAGGGGAGCAATGCGGGAGGTAAGAGTTCGGGAGCCTCCTCAT
CCTCCTCATGCACCAGTAGCGCTCGCCCTCGCCCCGTCTCCAGCCTTACC
AGTCTTGCCCAAGTCTTGCCTCCTCCGCCTTCGCGCTCTCTTGATCTAGT
GCTGGACACTCACACTAAGAAGCGCACCAGCAGCAGCAGCAGCAGCAGCA
ACAGCAACAGTAGCGATAGACAGAACGGTATGCGGAAAGATGAGCGTGAT
CGAGAGCGAAGCGCTAAGCGCAGTGGAAGGGAGAGAGGCGAAAGCTTCTC
GGGAGGAGATGGAGGTGAAGAAGATGAAGTCTTACCAAAGCAGGCACGAA
TGCGCATGACTGAACTTCCTGAAGCGCCTTCGATAAACCTTAGTGTCATT
CCGGAAGCCCCTCTGCTCAACCGCCGTTCAGGTGGTTTTTCCAGAGTGGC
TTCCTCCTCTGCGTCGTCAGCAGCTAGTGGTGGTGGATTGCGAGCTGGAG
GAGCAGGAAAACGGGGAGGAGGAAAAGAGAAAGGAGGAGAAAAAAGATAT
GGAGGAGGAGGCGATAGAAATTCCTTATTTTTACCGGCTTCATCACCAGC
GCCAAGGGAAGAAATGGAAAAAGAACGAGATGGACGAGGAGAGGTCGGTG
GCCTGGGGAAAGGGGCCAGCGGCGGCAGCGACGCGCAAAAGCTGGCCGAG
GCTGACGAAGTTCTAGAAGAGATGGAAAACGTGAAAAGAGTGCTCCTTGA
GGGCTTGGAGAAGGGAAAACAGGCTGTCTTGGAAGCCAAGGCGCTGAAGG
AGGAAAACAAGAAGAAGGAAAACGAGTTGGCCGAACGCGAGAGAGCTTTC
AAGGAGCGAGCCGCAGCACTTGAAGCGAAAGAAGTAGCGCACGTCAAGCG
TGCTTCCGAATTGGACAAGAGAGAGACGGCGATCGACTGCAGGAAAGAGG
AGCTAAGCCGGATGGAGGATCGGGCTAAGAATCGAGCGAAGGCGCAAGAT
GTGCAGCGTCAGTTTTTCTCATCCCATGAGAGGAAATTAGAAGAAAAGGA
ACGCAAGCTAGCTGCTGCGCAAGCTGCGTTGGAGGTGGAGAGAAAGAAGA
TAATGGAAACAGAGAAGGAGAGGAGGGAGGCATTGGTGAAGGAGAGACAG
GCTCAAGTTTTAAAGATACTCGACTTTGTAAGAAACCTCCAGGAGAAAAA
ACGGCATCATATCGTGCAGATCAACGAAGAGGTCAAAAGGAGACTGGATA
TAATAGATAGAAAAGAATCAAGCCTGAAAAAATTGGAAGAGGCTTATACC
AAGGTTTTAGACAATTTCGTGCAACTGTTGCTGTTAAACGGATGTATGAA
CATGGAGAACGGAAACTTCCGTCTCGTGCCTCCCGTAGGATCCTTGGCAG
CACAACAGCCTCAGTTCGCGCAGCAGCAACAACAGCAGTCGCAAGAACAG
CAACAGCAGCAGCAGCAACAGCAACAGCAACAACAACAACAACAACAACA
ACAACAACAAACACAACAGAAGCGACAGCAGCAGCAACAGCAGCAGCAGA
AGCAGCAGCAGCAGCAGCAGCATCACGCCGAAGTATTGAAATTGGCAGAA
AGGGGGAGAAGACCGGTGCTTAATTGCGGTCCCATTATTTTTTCTCGTAC
TTCTGCTGCTGATGCTGGTAGTGGCGGTAGCAGTGCTGCTGCTGCTAGGG
GAGTGGGAAAGGTGGTAGGAGGAATGGCTGGGGAAGTTCCTATTGCAAAC
ACCAAGAGGGGTTCAAATGGTCCTGGCGCTACTGCTGCGACTGCCGCTTC
TGTTTCTGCTCCTGCTCCTGCTTCTTCTTTTTCTACTCCTGCTGCTGCTC
CTGCTATTGCTTTTGCTGCTGCTACTGAGCAAGGAGTGATAATTGTGGGA
GCAGGTGGCACGAGTAGGACAGCCGTCCCTGCTCCTCCCTTTCACGCTCT
GTCATCCTTTTCGTTGACGGCTTCCCATCCATCTAGGACGCCACACGCCC
CCGCGTCTACCATCAGAGCCCGCCCTCCGCAAGCTAGGCGAGCTTCCTCC
GCACAAGGGGTCCCTGCTATTGGTCCCGTCTGCCCTCCCCCTGTCAACAT
GACCCTCCCCATTATCAGCCTGTCTCTGCCTCATTCCACCCGTTCCATGC
CACAAGCAACACCGGCAGCAGTAGAGACGGCAGCAGCAAAAGCAGCAGCG
TTAGTAGCAGCAGCACGAACCAAAATGCTGTCAACCACCTCCTCTACCCT
GTCCTCCCCCTCCTCCTCGGCTCCGATTCCCACTTTTTCAAGTCCTGCTG
TACATGCCCCGTAAACGGCGGCTGCGGCCACTTCTGCATCACACCATTAC
CCCACCATAATGGCATCGTTCACAGACAGCTCCAGACCGGCTGTCTCCTT
CACTCCCTTCGCGGGGGCCCGTTCTGCTTCCCCTGCCCCCTCAACCACTG
TCCCTCCTTCCCGATCTGCAAATCCTTCAAGTGCTGCTGCGATTGTTGCT
GCGCCTGCTACAACATTTGATCCTGCTTCTAATCGTCTTCCTTCTCCTCC
CATGTCTCCTCCTGTCGTGGGCGCTGCTCCCACGTTTGCCCCTTTCCCGC
CAACTATGCCTGAAAGCCTCAGTTCTGCGTCTTCTTCTGCTGCATCGCTT
CGACGACGATAGCCGACTGTGCTATCAACAATGCTACCGAAGATACGTGC
ATTACTTCGCCCCCAGATAGCCGTGAATTGTAAATAAAAATTGAATGTAA
TTTTAGAAATTGTGTGTGTGTGTGAGATACCCACTTCCCCCTCCAGTTTC
GAATCAATGTGTACACAAATTAGAGATGGAGGAGGGGGGTGGGGGGGAAG
CAGAGCTCAAGAACGCTAACCTCATATCAAGATCTTAGAAAGGCGACTTA
AATCCCTGCACCTAATCTATAATTCAACTAGAAAATCGTAGTGGCGAATT
TATTCAATAGGAAGAACAAATGGTTCATTCATATGGTACAGGGATAAGTA
TCGGAGAAAAGGGGACAATCAGTCAGATAGGCAGGCCCTAGCGTAGTCCG
AGTCAAATATGAGATGCCACAAGTGCTCCATTACGAAACTGGACTTCTCT
AATCTTCTCGCTACTGCGCATTTTGCCATTAACTTGCACTTTTTGAAGTA
AAAGTGTACGGCAAAGTGGTCGCGAAGACATCAAGGTGAGGGAGCTGGGT
AAAAATGTTAAATGATGAGAGGGAGTATTGGAAGAAGTAAAATGTGTGTG
TCAAATACGTACTGCGAATAATTTTA
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protein sequence of NO05G03390.1

>NO05G03390.1-protein ID=NO05G03390.1-protein|Name=NO05G03390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=795bp
MGRLLASRNHTTPLCTRPSTGARYQMEGSNAGGKSSGASSSSSCTSSARP
RPVSSLTSLAQVLPPPPSRSLDLVLDTHTKKRTSSSSSSSNSNSSDRQNG
MRKDERDRERSAKRSGRERGESFSGGDGGEEDEVLPKQARMRMTELPEAP
SINLSVIPEAPLLNRRSGGFSRVASSSASSAASGGGLRAGGAGKRGGGKE
KGGEKRYGGGGDRNSLFLPASSPAPREEMEKERDGRGEVGGLGKGASGGS
DAQKLAEADEVLEEMENVKRVLLEGLEKGKQAVLEAKALKEENKKKENEL
AERERAFKERAAALEAKEVAHVKRASELDKRETAIDCRKEELSRMEDRAK
NRAKAQDVQRQFFSSHERKLEEKERKLAAAQAALEVERKKIMETEKERRE
ALVKERQAQVLKILDFVRNLQEKKRHHIVQINEEVKRRLDIIDRKESSLK
KLEEAYTKVLDNFVQLLLLNGCMNMENGNFRLVPPVGSLAAQQPQFAQQQ
QQQSQEQQQQQQQQQQQQQQQQQQQQQTQQKRQQQQQQQQKQQQQQQHHA
EVLKLAERGRRPVLNCGPIIFSRTSAADAGSGGSSAAAARGVGKVVGGMA
GEVPIANTKRGSNGPGATAATAASVSAPAPASSFSTPAAAPAIAFAAATE
QGVIIVGAGGTSRTAVPAPPFHALSSFSLTASHPSRTPHAPASTIRARPP
QARRASSAQGVPAIGPVCPPPVNMTLPIISLSLPHSTRSMPQATPAAVET
AAAKAAALVAAARTKMLSTTSSTLSSPSSSAPIPTFSSPAVHAP*
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Synonyms
Publications