NO05G02780, NO05G02780 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO05G02780 vs. NCBI_GenBank
Match: EWM28144.1 (hypothetical protein Naga_100004g179 [Nannochloropsis gaditana]) HSP 1 Score: 217.6 bits (553), Expect = 9.600e-53 Identity = 139/324 (42.90%), Postives = 190/324 (58.64%), Query Frame = 0 Query: 239 VQEQRARRLKAEAAERARSLAARYGAHHEVMRQGVQELRDVLGQMEACFDLIVPDMRKGLEALGEAPSAASSFSPATLGRAKGGYEKQAVGEN-----YAEKENLEEDGEKAQFDDESVEWESGDDAEGDGEGLAAAGSRIEGDFISDNDSRGESDDERKE-EEGLYGLGTLPFYEIEVDLPWLAGGRERDHYRETADLGPVFDQVGELYGVLTGRLLPQAEQWWRLLAACCVHYPETLVGEALESCRVLMKEMGTLKSQAWLVVEKCKEIGGAEKKGRXXXXXXXXXXXXXXXXXXXXVLPAATLELESFLKETDAAMTAKEK 557 ++E+ A + +A+ E +RSLAAR AH MRQGVQELRD L QMEACF LIVPD+R+G+E +GE+ + ++ SPA + + QAVGE A K +E++ ++ SVEWES D + A ++ ++ + E ++E + E+ LY LGTLPFYEIEV+LPWL G + + ETADL PVF+Q+ ELYGVL RLLPQ EQWWRLL+A C +P + EA R L +E+ TL+SQ W V KCKEIGG+ +K + L A+TLELE+FL++ A K + Sbjct: 1 MREREALQAEAQRVEMSRSLAARCRAHEGAMRQGVQELRDALVQMEACFTLIVPDVREGIEVVGESGTGEAT-SPAQRSQTEWDERVQAVGEALEASCQASKPGVEDERASEHDEESSVEWESEDGVPAESVERAVP---LQPSWVENGRDVCEDEEEGDDVEDSLYALGTLPFYEIEVELPWLVSGAQTEAL-ETADLKPVFEQLRELYGVLRRRLLPQIEQWWRLLSAFCAEHPPHVAEEASVGLRELSQEVSTLRSQGWRSVAKCKEIGGSYRKRK----HSKTTADCHGSGSTQRALTASTLELEAFLEDYHATKELKSR 315
BLAST of NO05G02780 vs. NCBI_GenBank
Match: XP_004332920.1 (hypothetical protein ACA1_145280 [Acanthamoeba castellanii str. Neff] >ELR10907.1 hypothetical protein ACA1_145280 [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 80.1 bits (196), Expect = 2.400e-11 Identity = 56/181 (30.94%), Postives = 92/181 (50.83%), Query Frame = 0 Query: 114 ELKKMLRGGDEMLARQAFGFVVAQLRDRHSEVRKRALLLLGRLVKRSATLRTELARNIRNVLDLTVGSSRYK-LSGSLEETEDLKATSLGFLEEWNETFGEQNIELRVAYRHLKDVVGASFPNRQAVQEQRARRLKAEAAERARSLAARY-GAHHEVMRQGVQELRDVLGQMEACFDLIVP 293 ++K + + DE + + AF F+ +L+ SEVR ALLL+ RSA R L +N L+L VG+ YK L E L+ L F+E W+E +G N +LRV + +LK + FP + E R + + + L ++ E+ V++L+ L +M+ CFD+++P Sbjct: 31 QIKAIAKKSDENV-KSAFHFLSQKLKADSSEVRYLALLLVNEFFTRSACFRALLIDEFQNFLELVVGTKVYKPLPPPSERAVQLRQKGLEFIENWHEQYGHANKQLRVGHHYLKHSLRMRFPEVRLQSEIAERERRQREEQTQKILRVKFERVKKEIDEYVVEQLQPFLLEMDGCFDILMP 210
BLAST of NO05G02780 vs. NCBI_GenBank
Match: CBN75384.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 78.2 bits (191), Expect = 9.100e-11 Identity = 55/175 (31.43%), Postives = 93/175 (53.14%), Query Frame = 0 Query: 123 DEMLARQAFGFVVAQLRDRHSEVRKRALLLLGRLVKRSATLRTELARNIRNVLDLTVG-SSRYKLSGSLEETEDLKATSLGFLEEWNETFGEQNIELRVAYRHLKDVVGASFPNRQAVQEQRARRLKAEAAER----ARSLAARYGAHHEVMRQGVQELRDVLGQMEACFDLIVP 293 DE A A +++ ++ + +EVR AL ++G L +RS +R + +++N ++L VG +R+ L G L+ +L +EEWNE+ G+ LR AYR L++ FP QA RA R + AA R R L A+Y + + E++ ++ +M+ CF ++VP Sbjct: 123 DEDCAAGAIRYLMQRMAAKSAEVRFMALSIVGLLFQRSRVVRKVIVADLKNFMNLAVGHDARHPLPGPPAAAVALREKALALMEEWNESHGDLYKGLRAAYRFLREGKRMKFPELQA----RAARARDAAARRDKHARRLLQAKYLQAKAEITEQASEIQTIVREMDECFAILVP 293
BLAST of NO05G02780 vs. NCBI_GenBank
Match: XP_006874192.1 (PREDICTED: UV-stimulated scaffold protein A [Chrysochloris asiatica]) HSP 1 Score: 76.6 bits (187), Expect = 2.600e-10 Identity = 65/213 (30.52%), Postives = 103/213 (48.36%), Query Frame = 0 Query: 114 ELKKMLRGGDEMLARQAFGFVVAQLRDRHSEVRKRALLLLGRLVKRSATLRTELARNIRNVLDLTVGSSRYK-LSGSLEETEDLKATSLGFLEEWNETFGEQNIELRVAY---RHLKDV----VGASFPNRQAVQEQRARRLKAEAAERARSLAARYGAHHEVMRQGVQELRDVLGQMEACFDLIVP-DMRKGLEALGEAPSAASSFSPATLG 318 ELKK+ + +E L R A+ ++ QL H+EVR A ++ L RS R + N + L+LT+G+ + L E + L+ ++ +E WNE FGE +L + Y RH K V + A + + ++ RRL + ERA+ A M + +E+R L ++E+CF L+VP D GE ++S PA G Sbjct: 27 ELKKICKSSEEQL-RHAYHLLMTQLTQEHAEVRLSAFQVVAALFTRSHQFRLLVVSNFQEFLELTLGTDHEQPLPPPREVAQKLRRAAIQAVEAWNEKFGEAYKKLALGYHFLRHNKQVDFQDINARTLAERKREAEKQRRLDSIYRERAKQAGAE-------MEEMSEEVRSCLTEVESCFQLLVPFDFATSPGVPGEDAFPSTSLCPAAPG 231
BLAST of NO05G02780 vs. NCBI_GenBank
Match: KQK74687.1 (UV-stimulated scaffold protein A [Amazona aestiva]) HSP 1 Score: 75.9 bits (185), Expect = 4.500e-10 Identity = 58/189 (30.69%), Postives = 96/189 (50.79%), Query Frame = 0 Query: 114 ELKKMLRGGDEMLARQAFGFVVAQLRDRHSEVRKRALLLLGRLVKRSATLRTELARNIRNVLDLTVG-SSRYKLSGSLEETEDLKATSLGFLEEWNETFGEQNIELRVAYRHLK--------DVVGASFPNRQAVQEQRARRLKAEAAERARSLAARYGAHHEVMRQGVQELRDVLGQMEACFDLIVPD 294 ELKK+ R DE + A+ ++ +LR+ H+E+R A ++ L RS RT L N ++ L LTVG L E + L+ ++ ++EW+E +GE +L + Y LK DV + R+ +E++ +RL E+A+ + M + QE+ D L +ME+CF L++PD Sbjct: 27 ELKKICRSSDEHI-NHAYHLLLTRLREEHAEMRFSAFQIVQELFSRSHQFRTLLISNFQDFLXLTVGIDHEQPLPPPKEVAQKLRKETIKSVQEWHEKYGEAYKKLALGYHFLKQNKKVDFEDVHARTMAERRR-EEEKQKRLDNVYKEKAKRA-------EKEMEEMSQEIADTLTEMESCFRLLLPD 206
BLAST of NO05G02780 vs. NCBI_GenBank
Match: XP_007063759.1 (PREDICTED: UV-stimulated scaffold protein A [Chelonia mydas]) HSP 1 Score: 73.9 bits (180), Expect = 1.700e-9 Identity = 53/183 (28.96%), Postives = 93/183 (50.82%), Query Frame = 0 Query: 114 ELKKMLRGGDEMLARQAFGFVVAQLRDRHSEVRKRALLLLGRLVKRSATLRTELARNIRNVLDLTVGSSRYK-LSGSLEETEDLKATSLGFLEEWNETFGEQNIELRVAYRHLKDVVGASFP--NRQAVQEQRARRLKAEAAERARSLAARYGAHHEVMRQGVQELRDVLGQMEACFDLIVPD 294 ELKK+ + DE ++ A+ ++ QL H+E+R A ++ L RS RT + N + L+LT+ + + L E + LK T++ +++W+E +GE +L + Y LK F N + + E+R K + + A+ + M + QE++D L +ME CF L++PD Sbjct: 27 ELKKICKSSDEHIS-HAYRLLMTQLNQEHAEIRFSAFQIVDELFTRSHQFRTLIISNFQEFLELTIETDHEQPLPPPKEVAQKLKKTAIKSVQDWHEKYGEAYKKLSLGYHFLKQNKKVDFQDVNVRTLAERRREEEKQKRLDNIYKEKAKRA--EKEMEEMSQEIQDTLTEMENCFRLLMPD 206
BLAST of NO05G02780 vs. NCBI_GenBank
Match: XP_009998588.1 (PREDICTED: UV-stimulated scaffold protein A [Chaetura pelagica]) HSP 1 Score: 73.9 bits (180), Expect = 1.700e-9 Identity = 53/185 (28.65%), Postives = 93/185 (50.27%), Query Frame = 0 Query: 118 MLRGGDEMLARQAFGFVVAQLRDRHSEVRKRALLLLGRLVKRSATLRTELARNIRNVLDLTVG-SSRYKLSGSLEETEDLKATSLGFLEEWNETFGEQNIELRVAYRHLKDVVGASFPNRQA-------VQEQRARRLKAEAAERARSLAARYGAHHEVMRQGVQELRDVLGQMEACFDLIVPDM 295 M+R +E ++ A+ ++ +LR+ H+E+R A L+L L RS RT + N + L+LTVG L E + L+ +L ++EW+E +GE +L + Y L+ F + A +E++ +RL E+A+ + M + QE+ + L +ME CF L++PD+ Sbjct: 27 MMRSSEEHIS-HAYHLLMTRLREEHAEMRFSAFLILQELFTRSHPFRTRVISNFQEFLELTVGIDHEQPLPPPREVAQKLRKAALRSVQEWHEKYGEAYKQLSLGYHFLRQNKKVDFQDVHARTVAERRREEEKQKRLDTIYKEKAKRA-------EKEMEEMSQEVANTLTEMENCFQLLIPDL 203
BLAST of NO05G02780 vs. NCBI_GenBank
Match: XP_012429117.1 (PREDICTED: UV-stimulated scaffold protein A [Taeniopygia guttata]) HSP 1 Score: 73.9 bits (180), Expect = 1.700e-9 Identity = 53/181 (29.28%), Postives = 88/181 (48.62%), Query Frame = 0 Query: 114 ELKKMLRGGDEMLARQAFGFVVAQLRDRHSEVRKRALLLLGRLVKRSATLRTELARNIRNVLDLTVG-SSRYKLSGSLEETEDLKATSLGFLEEWNETFGEQNIELRVAYRHLKDVVGASFPNRQAVQEQRARRLKAEAAERARSLAARYGAHHEVMRQGVQELRDVLGQMEACFDLIVPD 294 ELKK+ + +E ++ QA ++ +LR+ H+E+R A ++ L RS RT L N + L+LTVG L E + L+ ++ ++EW+E +GE +L + Y LK F + A RR + + + + M + QE+ D L +ME CF L++PD Sbjct: 27 ELKKICKSSEEQVS-QAHHLLLTRLREEHAEMRFSAFQVVQELFARSHHFRTLLIANFQEFLELTVGIDHEQPLPPPKEVAQKLRRAAIKAVQEWHEKYGEAYKQLSLGYHFLKQNKKVDFQDVHARTVAERRREEEKQKRLENIYKEKVKRTEKEMEEMSQEIADTLTEMENCFQLLMPD 206
BLAST of NO05G02780 vs. NCBI_GenBank
Match: XP_021391356.1 (UV-stimulated scaffold protein A [Lonchura striata domestica] >OWK62423.1 UV-stimulated scaffold protein A [Lonchura striata domestica]) HSP 1 Score: 73.9 bits (180), Expect = 1.700e-9 Identity = 52/181 (28.73%), Postives = 89/181 (49.17%), Query Frame = 0 Query: 114 ELKKMLRGGDEMLARQAFGFVVAQLRDRHSEVRKRALLLLGRLVKRSATLRTELARNIRNVLDLTVG-SSRYKLSGSLEETEDLKATSLGFLEEWNETFGEQNIELRVAYRHLKDVVGASFPNRQAVQEQRARRLKAEAAERARSLAARYGAHHEVMRQGVQELRDVLGQMEACFDLIVPD 294 ELKK+ + +E ++ QA+ ++ +L++ H+E+R A ++ L RS RT L N + L+LTVG L E + L+ ++ ++EW+E +GE +L + Y LK F + A RR + + + + M + QE+ D L +ME CF L++PD Sbjct: 27 ELKKICKSSEEQVS-QAYHLLLTRLQEEHAEMRFSAFQVVQELFARSHHFRTLLIANFQGFLELTVGIDHEQPLPPPKEVAQKLRRAAIKAVQEWHEKYGEAYKQLSLGYHFLKQNKKVDFQDVHARTVAERRREEEKQKRLENIYKEKVKRTEKEMEEMSQEIADTLTEMENCFQLLMPD 206
BLAST of NO05G02780 vs. NCBI_GenBank
Match: XP_009684573.1 (PREDICTED: UV-stimulated scaffold protein A [Struthio camelus australis]) HSP 1 Score: 73.6 bits (179), Expect = 2.200e-9 Identity = 55/191 (28.80%), Postives = 95/191 (49.74%), Query Frame = 0 Query: 114 ELKKMLRGGDEMLARQAFGFVVAQLRDRHSEVRKRALLLLGRLVKRSATLRTELARNIRNVLDLTVG-SSRYKLSGSLEETEDLKATSLGFLEEWNETFGEQNIELRVAYRHLK--------DVVGASFPNRQAVQEQRAR--RLKAEAAERARSLAARYGAHHEVMRQGVQELRDVLGQMEACFDLIVPD 294 ELKK+ + DE ++ A+ ++ +L + H+E+R A ++ L RS RT + N + L+LTVG L E + L+ ++ +++W+E +GE +L + Y LK DV + R+ +E++ R + E A+RA + M + QE+ D L +ME CF L++PD Sbjct: 71 ELKKICKSSDEHIS-HAYHLLMTRLNEEHAEIRFSAFQIVHELFTRSHQFRTLIISNFQEFLELTVGIDHEQPLPPPKEVAQKLRKAAIKAVQDWHEKYGEAYKQLSLGYHFLKQNKKVDFQDVSARTLAERRREEEKQKRLDNIYKEKAKRA----------EKEMAEMSQEIADTLTEMENCFQLLMPD 250 The following BLAST results are available for this feature:
BLAST of NO05G02780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G02780 ID=NO05G02780|Name=NO05G02780|organism=Nannochloropsis oceanica|type=gene|length=4457bpback to top protein sequence of NO05G02780.1 >NO05G02780.1-protein ID=NO05G02780.1-protein|Name=NO05G02780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=558bpback to top Synonyms
Publications
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