NO05G01890, NO05G01890 (gene) Nannochloropsis oceanica

Overview
NameNO05G01890
Unique NameNO05G01890
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2715
Alignment locationchr5:517497..520211 +

Link to JBrowse

Properties
Property NameValue
DescriptionSh2 domain containing protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:517497..520211 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0007165signal transduction
GO:0009058biosynthetic process
GO:0007165signal transduction
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
GO:0003700DNA-binding transcription factor activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR036860SH2_dom_sf
IPR007111NACHT_NTPase
IPR001217STAT
IPR024983CHAT_dom
IPR003593AAA+_ATPase
IPR000980SH2
Homology
BLAST of NO05G01890 vs. NCBI_GenBank
Match: EWM28181.1 (sh2 domain containing protein [Nannochloropsis gaditana])

HSP 1 Score: 1330.9 bits (3443), Expect = 0.000e+0
Identity = 705/923 (76.38%), Postives = 764/923 (82.77%), Query Frame = 0
Query:    1 MFARFHFPG--SRSSRDXXXXXXXXXXXXXXXXXXXDGTLRHVSTQLQEPNPTRSPSFMLHGGGMPQGPLAPCRLGYLYSAPLVHKAGGQAKELDMQDGMHIDISQELGRLKRTLHDAQRRILFRAEVATVKNCRKLLTIGCRMLHYTGIGKPSCLIFEKEKPLGETNILNIETLTELFAAGGVRTQLVFVSARHSEIVGRAFLAAGVRHVVAMKWDAKVSDRAACIFAEFFYLSIAMGRTVRQAFEVASTAAVTETGASGDDEQFLLLPAEGDHDLAIFDDAEVGSFVDESPPPVPNTCDPPPVPFVGRNVAVQEVVGLLSMVSQGNRCITVRGRPGVGKTALASRVCQYLAERNLFDAIYLVPLRRKVYGSYEKETLCKVMGAAIGFEDASNEREIVFLLQDKHPSGRVIMVLDGPDRFFNRSNSLVQVLSYLLSRIHGLHLLVTAEGSVLGSGSGRLESSSEKVVHLGPLSDVATAHMLANIAPPGFKLEEMMSRPYATKEEAYAELAASPVIRELRGHPKAIVMFAPLLEDHRLKDLFEKAKLCYLEASTAAEIDLPS------------------KXXXXXXXXXXXXXSNFDAEAKELDASTLEKETEAARRFLRDPMSQRLWLEVVRQGGARQSSSMHQGVPWYRLTDALQEELRGALVDALRMLRLQVTDSSAALSSSVTMKMSVGAFAGAGGVEESKASMSPSMPLSSVGTEAKEEGKGAEVSTYRRGGETDDDGLVRGLEPGDIQFIKDRLGARMPGNDLVKITDFSVFCEGWVPVQKSIRLLCREWLCNSPRLVHGFLSRKETEDLLQGHKEGTFIFRFSTSHLGLLSISFVGKRPASISEKKTDTDNAVIAPFRHFLVQVEEDRHCVVFMEPGRSRHASLEDLVMSSTSLLEFYPGVPKAQALVQMQKYKN 904
            MFARFH PG  ++S+R                    +G+   + T   +  P+RSP F LH GG  + PL+PCRLGYLYSAPLVHKAGGQAKELDMQDGMHIDI QELGRLK TLHDAQRRILFRAEVATVKNCRKLLTIGCRMLHYTGIGKPSCLIFEKEKP+GETN+L+IETLTELFAAGGVRTQLVFVSARHSEIVGRAF+AAGVRHVVAMKWDAKVSDRAACIFAEFFYLSIAMGRTVRQAFEVASTAAVTETG S +DEQFLLLPA+G+HDLA+FDDAE+G FVDESPPPVPNTCDPPPVPFVGRNVA QEV+GLLSMVSQGNRCITVRGRPGVGKTALAS+VCQYLAERN FDAIY+VPLRRK Y SYEKETLCKV+GAAIGFEDASNEREIVFLLQDKHPSGRVIMVLDGPDRFFNRSNSLVQVLSYLLSRIHGLHLLVTAEGSVLGSGSGRLESSSEKVVHLGPLSDVATAHMLANIAPPGF LEEMMSRPYAT+EEAYAELAASPVIRELRGHPKAIVMFAPLLEDHRL+DL++KAK CY++AS   E+D PS                   XXXXXXXXXXXX  N   E +ELDA  L +ETE AR+FLR+P SQRLWLEVVRQGGARQSSSMHQGVPWYRLTDALQEELR AL+DALR+ R  + D  A   S+           G GG E SKA   P++      +E K++ K A+ +T       D DG +RGLEPGDIQFIKDRL  R P +DLV+ITDF+VFCEGWVP Q SI LLCREWLCN PRL+HGFLSRKETE LLQG+KEGTF+FRFSTSHLGLLS+SFVGK   +    +     A     RHFLVQVEEDR CVVFMEPGRSRHASLEDL+MSS SLLEFYPGVPKA AL QM++YK+
Sbjct:    1 MFARFHLPGHHAKSARS------------KAKEVNGNGSHTQLPTSSSQDVPSRSPPFALHSGGATRDPLSPCRLGYLYSAPLVHKAGGQAKELDMQDGMHIDIGQELGRLKHTLHDAQRRILFRAEVATVKNCRKLLTIGCRMLHYTGIGKPSCLIFEKEKPVGETNVLSIETLTELFAAGGVRTQLVFVSARHSEIVGRAFIAAGVRHVVAMKWDAKVSDRAACIFAEFFYLSIAMGRTVRQAFEVASTAAVTETGVSSEDEQFLLLPADGEHDLAVFDDAEMGEFVDESPPPVPNTCDPPPVPFVGRNVAAQEVIGLLSMVSQGNRCITVRGRPGVGKTALASKVCQYLAERNQFDAIYMVPLRRKEYRSYEKETLCKVIGAAIGFEDASNEREIVFLLQDKHPSGRVIMVLDGPDRFFNRSNSLVQVLSYLLSRIHGLHLLVTAEGSVLGSGSGRLESSSEKVVHLGPLSDVATAHMLANIAPPGFDLEEMMSRPYATREEAYAELAASPVIRELRGHPKAIVMFAPLLEDHRLEDLYDKAKQCYVDASQVVEVDTPSMGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAENGRDEKRELDALALARETEEARQFLREPTSQRLWLEVVRQGGARQSSSMHQGVPWYRLTDALQEELRKALIDALRLSRFHIEDFCATHCST----------NGNGGAEGSKAFSPPAV------SETKQDSKVADGATI---SIADKDGTIRGLEPGDIQFIKDRLVIRTPESDLVRITDFAVFCEGWVPAQNSIALLCREWLCNKPRLLHGFLSRKETEALLQGYKEGTFLFRFSTSHLGLLSLSFVGKSRKNYPNDEEGEKKAKALHIRHFLVQVEEDRRCVVFMEPGRSRHASLEDLIMSSASLLEFYPGVPKAHALTQMRRYKS 892          
BLAST of NO05G01890 vs. NCBI_GenBank
Match: XP_005852744.1 (sh2 domain containing protein, partial [Nannochloropsis gaditana CCMP526] >EKU23087.1 sh2 domain containing protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 682.6 bits (1760), Expect = 1.700e-192
Identity = 343/365 (93.97%), Postives = 357/365 (97.81%), Query Frame = 0
Query:  180 GGVRTQLVFVSARHSEIVGRAFLAAGVRHVVAMKWDAKVSDRAACIFAEFFYLSIAMGRTVRQAFEVASTAAVTETGASGDDEQFLLLPAEGDHDLAIFDDAEVGSFVDESPPPVPNTCDPPPVPFVGRNVAVQEVVGLLSMVSQGNRCITVRGRPGVGKTALASRVCQYLAERNLFDAIYLVPLRRKVYGSYEKETLCKVMGAAIGFEDASNEREIVFLLQDKHPSGRVIMVLDGPDRFFNRSNSLVQVLSYLLSRIHGLHLLVTAEGSVLGSGSGRLESSSEKVVHLGPLSDVATAHMLANIAPPGFKLEEMMSRPYATKEEAYAELAASPVIRELRGHPKAIVMFAPLLEDHRLKDLFEKAK 545
            GGVRTQLVFVSARHSEIVGRAF+AAGVRHVVAMKWDAKVSDRAACIFAEFFYLSIAMGRTVRQAFEVASTAAVTETG S +DEQFLLLPA+G+HDLA+FDDAE+G FVDESPPPVPNTCDPPPVPFVGRNVA QEV+GLLSMVSQGNRCITVRGRPGVGKTALAS+VCQYLAERN FDAIY+VPLRRK Y SYEKETLCKV+GAAIGFEDASNEREIVFLLQDKHPSGRVIMVLDGPDRFFNRSNSLVQVLSYLLSRIHGLHLLVTAEGSVLGSGSGRLESSSEKVVHLGPLSDVATAHMLANIAPPGF LEEMMSRPYAT+EEAYAELAASPVIRELRGHPKAIVMFAPLLEDHRL+DL++KAK
Sbjct:   28 GGVRTQLVFVSARHSEIVGRAFIAAGVRHVVAMKWDAKVSDRAACIFAEFFYLSIAMGRTVRQAFEVASTAAVTETGVSSEDEQFLLLPADGEHDLAVFDDAEMGEFVDESPPPVPNTCDPPPVPFVGRNVAAQEVIGLLSMVSQGNRCITVRGRPGVGKTALASKVCQYLAERNQFDAIYMVPLRRKEYRSYEKETLCKVIGAAIGFEDASNEREIVFLLQDKHPSGRVIMVLDGPDRFFNRSNSLVQVLSYLLSRIHGLHLLVTAEGSVLGSGSGRLESSSEKVVHLGPLSDVATAHMLANIAPPGFDLEEMMSRPYATREEAYAELAASPVIRELRGHPKAIVMFAPLLEDHRLEDLYDKAK 392          
BLAST of NO05G01890 vs. NCBI_GenBank
Match: XP_009035732.1 (hypothetical protein AURANDRAFT_63276 [Aureococcus anophagefferens] >EGB09688.1 hypothetical protein AURANDRAFT_63276 [Aureococcus anophagefferens])

HSP 1 Score: 210.7 bits (535), Expect = 1.900e-50
Identity = 196/600 (32.67%), Postives = 268/600 (44.67%), Query Frame = 0
Query:   41 VSTQLQEPNPTRSPSFMLHGGGMPQGPL--APCRLGYLYSAPLVHKA-----GGQAKELDMQDGMHIDISQELGRLKRTLHDAQRRILFRAEVATVKNCRKLLTIGCRMLHYTGIGKPSCLIFEKEKPLGETNILNIETLTELFAAGGVRTQLVFVSARHSEIVGRAFLAAGVRHVVAMKWDAKVSDRAACIFAEFFYLSIAMGRTVRQAFEVASTAAVTETGASGDDEQFLLLPAEGDHDLAIF--DDAEV------------GSFVDESPPPVPNTCDPPPVPFVGRNVAVQEVVGLLSMVSQGNRCITVRGRPGVGKTALASRVCQYLAERNLFDAI----------------YLVPLRRKVYGSYEKETL---------CKVMGAAIGFEDASNER-----EIVFLLQDKHPSGRVIMVLDGPDRFFNRSNSLVQVLSYLLSRIHGLHLLVTAEGSVLGSGSGRLESSSEKVVHLGPLSDVATAHMLANIAPPGFKLEEMMS----------------------------RPYATKEEAYAELAASPVIRELRGHPKAIVMFAP-LLEDHRLKDLFEKAKLCYLEASTAAEIDLPS 561
            + T +  P  T + S      G P  P    P RLGYL + PLV++      G        +DG       E+  LK  L  ++  + FR+ VATV   R LLT+GC  LH++G G P  L FE E    E  ++  + L  LFAAGG R +LVF +A  SE  GRAF A  V HV+ ++ DA++ DRAA   AE FY +I  GRTVR+AF++   AAV   GA+     +LLLP +GDHD+ +   DDA +            G+  DES P   ++C  PP P  GR  AV EVV L     +G RC+TV G  G GK A+A    Q+LA+R  F A+                Y+V   R+ Y    +  L         C+  G       A +E         F        G V++V+ G          LV+++S+LL  + GL +L    G  L  G+ R+E++ EKV  L PL     A +L ++AP      E++                              P   +  A    AA   +  L G+ KA V FAP L  D R   L  +A  C L  S A+    PS
Sbjct:  809 MKTLVVAPAGTPTRSISTETCGTPTSPFDGQPFRLGYLCAEPLVYRKPDGSFGALPPVQSRRDG-------EVSLLKAVLARSETAVRFRSAVATVTELRSLLTVGCDALHFSGHGLPRSLSFELE-GRAELTMVGHDRLEALFAAGGHRARLVFAAACKSEFAGRAF-ARHVPHVICVRVDARLGDRAARDMAEQFYAAILRGRTVREAFDI-GVAAVGAAGAA-----YLLLPEDGDHDVPLVRGDDASLVAGDVALATARPGALRDESRPAAASSCPAPPAPLFGRAAAVAEVVRLAGY--EGRRCVTVAGARGSGKAAVARAAAQFLADRRHFAAVAHVDDLPKAPLSAFLSYVVDETRQPYPRVVERFLEAAAAARRACEGRGGGSRRPSADDELTPDSCARAFADLAALAGGSVLVVVRGAS---PEIRGLVRMISHLLENVPGLSVL--CSGEALHGGAERVENAPEKVYDLPPLPRHDMARLLDDLAPRRIPDAELLGLEPHDDAPRVATVTPTTRKLLAPIARGPDPADDRARALDAFAAHGALLALEGNAKAAVAFAPKLSRDLRDPALPGEAARC-LRDSDASPGSAPS 1385          
BLAST of NO05G01890 vs. NCBI_GenBank
Match: XP_009821618.1 (hypothetical protein H257_00575 [Aphanomyces astaci] >ETV89218.1 hypothetical protein H257_00575 [Aphanomyces astaci])

HSP 1 Score: 200.7 bits (509), Expect = 2.000e-47
Identity = 228/832 (27.40%), Postives = 358/832 (43.03%), Query Frame = 0
Query:   93 DMQDGMHIDISQELGRLKRTLHDAQRRILFRAEVATVKNCRKLLTIGCRMLHYTGIGKPSCLIFEKEKPLGETNILNIETLTELFAAGG-----VRTQLVFVSARHSEIVGRAFLAAGVRHVVAMKWDAKVSDRAACIFAEFFYLSIAMGRTVRQAFEVASTAA--VTETGASGDDEQFLLLPAEGDHDLAIFDDAEVGSFVDESPPPVPNTCDPPPVPFVGRNVAVQEVVGLLSMVSQGNRCITVRGRPGVGKTALASRVCQYLAERNLFDAIYLVPLR----RKVYGSYEKETLCKVMGAAIGFEDASN-----EREIVFLLQDKHPSGRVIMVLDGPDRFFNRSNSLVQ------VLSYLLSRIHGLHLLVTAEGSVLGSGSGRLESSSEKVVHLGPLSDVATAHMLANIAPPGFKLEEMMSRPYATKEEAYAELAASPVIRELRGHPKAIVMFAPLLEDHRLKDLFEKAKLCYLEASTAAEIDLPSKXXXXXXXXXXXXXSNFDAEAKELDASTLEKETEAARRFLRDPMSQRLWLEVVRQGGARQSSSMHQGVPWYRLTDALQEELRGALVDALRMLRLQVTDSSAALSSSVTMKMSVGAFAGAGGVEESKASMSPSMPLSSVG--TEAKEEGKGAEVSTYRRGGETDDDGLVRGLEPGDIQFI--KDRLGARM-----PGNDLVKITDFSVFCEGWVPVQKSIRLLCREWLCNSPRLVHGFLSRKETEDLLQGHKEGTFIFRFSTSHLGLLSISFV--GKRPASISEKKTDTDNAVIAPFRHFLVQVEEDRHCVVFMEPGRSRHASLEDLVMSSTSLLEFYPGVPK 892
            D Q    +D+ +E   L + L +  +++ +R+EVA V   RK+++ GCR LH++G G P  +IF  E    E + L+ + L  L  AG         +LVFVSA HSE V  AF++AGV HVV +  + KV D+ A  F++ FY ++  G +V ++FE+    A  VT+T  S    +F LL         +F D   G + D +PP   N CD     F+GR++   EV  + + +++G R +++ G  G+GKT +A + CQY  +R+LF+ ++ + L           Y    L K  G  +   D          ++  L  DK  +   ++VLDG +      N   Q      +LS LL R+  L LLVT+  + LG G+G      E+++ + PL     A +    AP   ++ EM            A  A S ++  L GHPK I   A LLE+H L    E   L YL  +  A +D  SK              +F  +   L   T+  + E      R    + + +  +                    +D L  +        L  ++ QV  S A+         S G    A  V E   S + S+ +  V   T    E  G +VS Y    +   D ++R L    ++F+   DR+  R          LV +  F  F   + P+   I+   + W    PRL+HGF+S+    ++L     GTF+ RFS +    + + FV  G R   +  +   T      P R F V +++    V F        ++L +LV++   L   YP  PK
Sbjct:   34 DFQPIEILDVKEERRLLLQCLQECGKQVKWRSEVADVHTFRKVISHGCRALHFSGHGVPGKVIF--ESATCEAHFLSQQELKTLLLAGDQPCPESAMRLVFVSACHSESVAEAFVSAGVPHVVVVPKEDKVLDQKAMEFSKAFYTALLAGHSVLKSFEIGQVQANIVTDTHQS----KFKLLGCGNHAASHLFSDLPPGPYEDLTPPLPVNECDAVAEAFIGRSL---EVHAVFTALAEGARMVSLVGDAGMGKTEVALQACQYATDRHLFERVFFLRLSAVPPAPNLTRYVLTRLAKCFGLLVQGNDLDGLCEHIRDQLDALKADKRLT--FLLVLDGCNYLLTNPNERSQLSTIQAILSQLLRRVRSLSLLVTST-TRLGGGAGLDCGVGERIIPIEPLPPWDAALLFTLRAPRRLQVHEMGG--------GLAPFAQSQIMDALGGHPKTICAVAQLLENHDL-SRDEGEFLHYLIPAVIAGLDPASK-------------QHFSTDYCPLLPYTVSSKKEPPSDMSRTHDDKLVPVAALPIACPXXXXXXXXXXXXXPASDGLSPQQL-----QLFAIKRQVEGSIAS---------SEGCMIWAHAVVEFNKSTASSVDVCQVAALTSVPFEFIGQQVSRY-FASKIRQDAVLRPLSTRCMEFLSSSDRIWGRAGVSPNTRRGLVDLDMFGAFWTWFQPLLSCIK-TSQLWGFKHPRLLHGFISKSSCVNMLSPCVPGTFLLRFSETKASCVVVVFVTSGGRVEMVPVEYKHT-----VP-RRFEVYLQDSGAIVSF--------STLPELVLNVHVLKFVYPHTPK 801          
BLAST of NO05G01890 vs. NCBI_GenBank
Match: CBJ30255.1 (SH2 domain containing protein [Ectocarpus siliculosus])

HSP 1 Score: 196.1 bits (497), Expect = 4.900e-46
Identity = 182/531 (34.27%), Postives = 259/531 (48.78%), Query Frame = 0
Query:   72 RLGYLYSAPLVHKAGGQAKELDMQDGMHIDISQELGRLKRTLHDAQRRILFRAEVATVKNCRKLLTIGCRMLHYTGIGKPSCLIFEK--EKPLGETNILNIETLTELFAAGG-VRTQLVFVSARHSEIVGRAFLAAGVRHVVAMKWDAKVSDRAACIFAEFFYLSIAM--GR-TVRQAFEVA-STAAVTETGASGDDEQ-FLLLPAEGDHDLAIFDDAEVGSFVDESP--PPVPNTCDPPPVPFVGRNVAVQEVVGLLSMVSQGNRCITVRGRPGVGKTALASRVCQYLAERNLFDAIY---------------LVPLRRKVY-----------GSYEKETLCKVMGAAIGF----EDASNE-REIVFLLQDK-HPSGRVIMVLDGPDRFFNR----SNSLVQVLSYLLSRIHGLH--LLVTAEGSVLGSGSGRLESSSEKVVHLGPLSDVATAHMLANIAPPGFKLEEM-MSRPYATKEEAYAELAASPVIREL----RGHPKAIVMFAPLLEDHRLKD---LFEKAKLC 547
            RLG++++APLV     +    +++    +   +EL  ++  L    R+I FRAEVA   N  +LL  GC +LHY G G    L FE   E   G    L ++ L  LF   G V+TQLVF+S+  SE  G  F+AAGV HVVA+K +A V+D AA  FA  FY ++    GR TV+QAF++A +    T  GA   +E  FLLLP +G+HD+ IFD    G  VDE+   PP P  C      ++G    VQ VV LL  + +   C+TV G PG GKT LA + C Y+  R+ F++                 LV    + Y            S   E LC+ +G AIG        +NE  + +F   D   PS +V++VLD  D    R     + LV +L  L S   G H  LL T+E  +L SG+      +E+V  + PL     + +L + +P   + EE+ +     +K    +     PV++E+     GHP  +V  AP+L +  L D   L E A  C
Sbjct:   21 RLGFIHAAPLVRFDHNRNMFRELK---ALRTCEELEFVRNKLRGFGRQIKFRAEVANAMNLTRLLHSGCLLLHYAGHGNDEYLAFESTTEWKCGIMEPLKVKYLKNLFRVDGIVKTQLVFISSCSSEASGNVFVAAGVPHVVAVKHNAGVTDGAAREFANVFYNALFENGGRSTVKQAFDMALNCVNATHLGAPKHEEDLFLLLPRDGNHDVRIFDTLPEGKLVDETHRLPPRP-PCKKAVSSYMG-PARVQHVVRLL--LDERAACVTVTGDPGSGKTELAIQACDYVRYRHHFNSFLWADCDKAALDASPYNLVSSADRFYVLPNSPNGASGDSVSSEDLCRQIGVAIGIPQPGPSTTNELHQFIFPNTDSGQPSQKVLLVLDNVDSLLERGGDAQDRLVHLLGDLCSMGGGGHLKLLATSEYKLL-SGNEVFHGGTERVAEVEPLETRHASELLIDNSPRDLQPEELGLQSGGLSKAHVVSAAQNHPVLKEVLEIAGGHPGTLVRLAPVLLNGPLDDACKLKEMATSC 543          
BLAST of NO05G01890 vs. NCBI_GenBank
Match: XP_008862502.1 (hypothetical protein H310_01224 [Aphanomyces invadans] >ETW08697.1 hypothetical protein H310_01224 [Aphanomyces invadans])

HSP 1 Score: 194.9 bits (494), Expect = 1.100e-45
Identity = 224/861 (26.02%), Postives = 367/861 (42.62%), Query Frame = 0
Query:   75 YLYSAPLVHKAG----GQAKELDMQDGMH--------IDISQELGRLKRTLHDAQRRILFRAEVATVKNCRKLLTIGCRMLHYTGIGKPSCLIFEKEKPLGETNILNIETLTELFAAGGV-----RTQLVFVSARHSEIVGRAFLAAGVRHVVAMKWDAKVSDRAACIFAEFFYLSIAMGRTVRQAFEVASTAAVTETGASGDDEQFLLLPAEGDHDLAIFDDAEVGSFVDESPPPVPNTCDPPPVPFVGRNVAVQEVVGLLSMVSQGNRCITVRGRPGVGKTALASRVCQYLAERNLFDAIYLVPLRRKVYG--SYEKETLCKVMGAAIGFEDASNERE-IVFLLQDK----HPSGRV--IMVLDGPDRFFNRSNSLVQ------VLSYLLSRIHGLHLLVTAEGSVLGSGSGRLESSSEKVVHLGPLSDVATAHMLANIAPPGFKLEEMMSRPYATKEEAYAELAASPVIRELRGHPKAIVMFAPLLEDHRL-KDLFEKAKLCYLEASTAAEIDLPSKXXXXXXXXXXXXXSNFDAEAKELDASTLEKETEAARRFLRDPMSQRLWLEVVRQGGARQSSSMHQGV---PWYRLTDALQEELRGALVDALRMLRLQVTDSSAALSSSVTMKMSVGAFAGAGGVEESKASMSPSMPLSSVGTEAKEEGKGAEVSTYRRGGETDDDGLVRGLEPGDIQFI--KDRLGARMPG------NDLVKITDFSVFCEGWVPVQKSIRLLCREWLCNSPRLVHGFLSRKETEDLLQGHKEGTFIFRFSTSHLGLLSISFVGKRPASISEKKTDTDNAVIAPFRHFLVQVEEDRHCVVFMEPGRSRHASLEDLVMSSTSLLEFYPGVPK 892
            +L+S+PLV +      G +   + Q G +        +D+ +E   L + L +  ++I +R+EVA V   RK+++ GCR LH++G G P  +IF  E    E + L+ + L  L  AG         +LVFVSA HSE V  AF++AGV HVV +  + KV D+ A  F++ FY ++  G +V ++FE+    A   T +     +F LL         +F D   G + D +PP   N CD     F+GR++   EV  + + +++G R + + G  G+GKT +A + CQY  ER+LF+ I+ +          SY    L K +G +   +  +N+ + +  LL+ K     P  R+  ++VLDG +  F++ N   Q      +LS LL R+  L LL+T+    LG G+G      E+++ + P+     A +    AP   ++ EM            A  A S ++  L GH + I   A LLE+H L +D  E   L YL  +  A +D  SK             +    +A        +   +             L +E           S+H  +                 G     L++  ++     +  S    M  S          + S A     +   +       E  G +VS +    +   + ++R L    + F+   DR+  R PG         V +  F  F   + P+   I+   R W    PRL+HGF+S+   +++L+    GTF+ RFS +    L + FV    A+   +    +    +P R F V + +    V F         +L +LV++   L   YP  PK
Sbjct:    4 HLHSSPLVVRQSSSSLGNSVNANCQYGSNNDFQPIEILDVKEERRLLLQCLQECGKQIQWRSEVADVHTFRKVVSHGCRALHFSGHGVPGKVIF--ESATCEAHFLSQDELKTLLLAGDQSRPENAMRLVFVSACHSESVAEAFVSAGVPHVVVVPKEDKVLDQKAMEFSKAFYTALLAGHSVSKSFEIGQVQADIVTVSDTHQSRFKLLGTGNHATSHLFSDLPPGMYEDLTPPLPINECDAVAEAFIGRSL---EVHAVFTALAEGARMVCLVGDAGMGKTEIALQACQYATERHLFERIFFLRWTTSATSLTSYVLARLAKCVGIS---QPPTNDLDGLCELLRGKLDAIRPDKRLNFLLVLDGCNHLFSKPNERNQLPQFQAILSQLLRRVRSLSLLLTSTNR-LGGGTGLDCGVGERIISIEPMPPWDAALLFTVRAPRRLQVHEMGG--------GLAPFAKSSIMEALGGHARTICAVAQLLENHDLARD--EGEFLHYLIPAIIAGLDPASKQHFSNDYCPLLPYTASSKKAPTRPPGASQTHDDLHH-------LSNLHIESKLSPTPLHPPSLHASISVAXXXXXXXXXXSTSGGLSPQQLQLFAIKRRVEGSIASPEGCMIWSHAVVEFNKSTQNSSAFDLRHVREVAAINAVPFEYLGQQVSRF-FASQLRQEAVLRPLSTRCMDFLSSSDRIWGR-PGMSPNARGGFVDVQMFRAFWTWFEPLLSCIK-TSRLWGFKHPRLLHGFISKSSCQNMLRPCVPGTFLLRFSETKPSCLVVVFV---TAAGRVEMVPIEYKHSSP-RQFEVYLHDSMSIVSF--------PTLHELVLNVHVLKYIYPHTPK 823          
BLAST of NO05G01890 vs. NCBI_GenBank
Match: XP_008612470.1 (hypothetical protein SDRG_08366 [Saprolegnia diclina VS20] >EQC34158.1 hypothetical protein SDRG_08366 [Saprolegnia diclina VS20])

HSP 1 Score: 192.2 bits (487), Expect = 7.000e-45
Identity = 235/882 (26.64%), Postives = 373/882 (42.29%), Query Frame = 0
Query:   75 YLYSAPLV-----------HKAGGQAKELDMQDGMHIDISQELGRLKRTLHDAQRRILFRAEVATVKNCRKLLTIGCRMLHYTGIGKPSCLIFEKEKPLGETNILNIETLTELFAAGGVRT------QLVFVSARHSEIVGRAFLAAGVRHVVAMKWDAKVSDRAACIFAEFFYLSIAMGRTVRQAFEVASTAAVTETGASGDDEQFLLLPAEGDHDLA-IFDDAEVGSFVDESPPPVPNTCDPPPVPFVGRNVAVQEVVGLLSMVSQGNRCITVRGRPGVGKTALASRVCQYLAERNLFDAIYLVPLRRKVYGS------YEKETLCKVMGAAIGFEDASNEREIVFLLQDK----------HPSGRVIMVLDGPDR-FFNRS------NSLVQVLSYLLSRIHGLHLLVTAEGSVLGSGSGRLESSSEKVVHLGPLSDVATAHMLANIAPPGFKLEEMMSRPYATKEEAYAELAASPVIRELRGHPKAIVMFAPLLEDHRLKDLFEKAKLCYLEASTAAEIDLPSK-------------------XXXXXXXXXXXXXSNFDAEAKELDASTLEKETEA-ARRFLRDPMS-QRLWLEVVRQGGARQSSSMHQGVPWYRLTDALQEELRGALVDALRMLRLQVTDSSAALSSSVTMKMSVGAFAGAGGVEESKASMSPSMPLSSVGTEAKEEGKGAEVSTYRRGGETDDDGLVRGLEPGDIQFIKDRLGARMPGNDLVKITDFSVFCEGWVPVQKSIRLLCREWLCNSPRLVHGFLSRKETED-LLQGHKEGTFIFRFSTSHLGLLSISFVGKRPASISEKKTDTD-NAVIAPFRHFLVQVEEDRHCVVFMEPGRSRHASLEDLVMSSTSLLEFYPGVPKA 893
            +L+S+PLV           + A   +  LD+Q    +D+ +E   L + L +  +++ +R+EVA V   RK+++ GCR LH++G G P  +IF  E    E + L+ + L  L  AG   T      +LVFVSA HSE V  AF++AGV HVV +  + KV D+ A  F++ FY ++  G +V +AFE+    A   + A     +F LL   GDH  + +F D  +G + D +PP   N CD     FVGR++   EV    + + +G R + + G  G+GKT +A + CQY  +R LF  I+ +        S      Y    L K     +  E   +  E +  L D+            S + ++V+DG +  F N++        L  V+S LL R+  L LL+T++ S LG G+G      E+++ +  L  +  A +    AP   ++ EM    +A         +   V+  L GHP+ I   A LLE   L+   E+  L YL  S  A +D  SK                                +  D        S L++ T+A         MS Q+L +  VRQ      SS    V W      ++ E     VD  R   +     +  +S     K+   A      VE   +S       SS                           L+ G  PG     K+         + V +  F+ F   + P+   I+     W    PRL+HGF+S++ ++  LL  +  GTF+ RFS +    L ++++    AS+  +    + N + + F    +++++++  VV+         SL  LV+S   L   YP  PKA
Sbjct:    4 HLHSSPLVVRQTASLPKPLNPAHPFSFSLDLQPIEILDVKEERRLLLQCLQECNKQVCWRSEVADVHTFRKVISYGCRALHFSGHGVPGKVIF--ENGTCEAHFLSQQELKTLLLAGVQGTSPENTMRLVFVSACHSESVAEAFVSAGVPHVVVVPKEDKVLDQKAMEFSKAFYTALLAGHSVYKAFEIGQVQADIVSIADHHQSKFKLL-GNGDHARSHLFSDLALGKYQDLTPPLPINECDAVAEVFVGRSI---EVHACYTALVEGARMVCLTGPAGIGKTEVALQTCQYATDRYLFARIFFLRFALATTPSSLSLRQYLMGRLAKSFNVPLSDETDVDSDEALEKLTDRIRDKLESSASSQSTKYLLVMDGCNALFLNKALAPGLMPQLRSVISQLLRRVRSLSLLLTSD-SRLGGGTGMDCGVGERIIPIEHLPPMDAALLFTVRAPRRLQIHEMGGDLHA--------FSRGVVMDALGGHPRTICAVAQLLEVRDLQ-RDEREFLHYLIPSVIAGLDPSSKQDLANDYCPLLPYGHARHPHGLVKSASSRVASAQMDPTPLRKHGSFLDRRTDAGGTEVATGGMSPQQLLVFAVRQHARAHISSPEGCVVWAHA--VVEYEASTPHVDGRRTTAVPFELLAQQISRFFASKVRQAA------VERPLSSRCMEFLASS--------------------------SLIWG-APGRCPKTKE---------NAVDVAMFAAFWSWFEPLIVCIQ-KTNVWAFKHPRLLHGFISKEASKAMLLATNAPGTFLLRFSETRQSCLVVAYL---TASLRVEFVPIEFNPISSTFE---MRLQDEKARVVY--------PSLSQLVLSIHVLTCIYPSTPKA 810          
BLAST of NO05G01890 vs. NCBI_GenBank
Match: CBJ26135.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 184.9 bits (468), Expect = 1.100e-42
Identity = 169/498 (33.94%), Postives = 247/498 (49.60%), Query Frame = 0
Query:   71 CRLGYLYSAPLVHKAG-GQAKELDMQDGMHIDISQE-LGR----LKRTLHDAQRRILFRAEVATVKNCRKLLTIGCRMLHYT--GIGKPSCLIFEKEKPLGETNILNIETLTELFAAGGVR---TQLVFVSARHSEIVGRAFLAAGVRHVVAMKWDAKVSDRAACIFAEFFYLSIAMGRTVRQAFEVASTAAVTETGASGDDEQFLLLPAEGDHDLAIFDDAEVGSF---VDESPPPVPNTCDPPPVPFVGRNVAVQEVVGLLSMVSQGNRCITVRGRPGVGKTALASRVCQYLAERNLFDAIYLVPLRRKVYGSYEKETLCKVMGAAIGFEDASNEREIV-----FLLQDKH----PSGRVIMVLDGPDRFF----NRSNSLVQVLSYLLSRIHGLHLLVTAEGSVLGSGSGRLESSSEKVVHLGPLSDVATAHMLANIAPPGFKLEEM-----MSRPYATKEEAYAELAASPVIRELRGHPKAIVMFAPLLEDHRL 537
            C L +L++APLV + G G+ KE    DG  + I QE  GR    + R L DA R I F +EVA  +N    LT GCR+LH+T  G G    +IF  EKP G    +  + L      GG +    +LV ++A  +++V   F+ AG+ +VVA+  D    D     F   FYLS+A G T+R +F+     A  ++   G +++ +LLPA G+H L+ FDDAE G+F   V  SP  +  +       F GR + VQEV   + MV Q ++ IT+ GRPG+GKT +A R C+Y  ER LF   + V L+ K  G+    T  K + A I      +++EI      FL   +H      G +++VLDG   +F    +    L  V+  L  R+  L  +VT    V          + EKVV++G L ++A A +    AP    +EE+     +S P+    E     A   ++  LR HP AIV  + +LE   L
Sbjct:   14 CLLAHLFAAPLVREVGVGEEKE----DGGIVGIKQENYGRERDVITRALADANRAIAFVSEVADGRNFLMNLT-GCRVLHFTWNGDGDQEKVIF--EKPNGLAAPVTEDWLQN--TCGGQKDKLPELVVLTAASAKLVAGVFIRAGISNVVAV--DTSGDDAVTLSFVRSFYLSLAQGFTLRDSFD-----AGVQSLPDGQEDRCVLLPANGEHWLSPFDDAESGTFTYRVPHSPSKMKMSKKKKISSFRGREIPVQEV--YMHMV-QHSKVITISGRPGIGKTEVALRACEYARERCLFIETFFVSLQDKTTGT--PITTLKEVAARIANAFGISKQEIQDHTEGFLGCIQHKCGLQKGDLLLVLDGCSPYFVNERDEKIKLSSVVEQLCPRVSNLQYIVTVVTQV--------GIAKEKVVNIGRLGELAAAELFVASAPRKVTVEELRGGMVVSGPHVQLAECMRLFAGGVIMSALRRHPGAIVASSGMLEQWHL 482          
BLAST of NO05G01890 vs. NCBI_GenBank
Match: OQR94502.1 (hypothetical protein ACHHYP_01246 [Achlya hypogyna])

HSP 1 Score: 184.5 bits (467), Expect = 1.500e-42
Identity = 158/499 (31.66%), Postives = 246/499 (49.30%), Query Frame = 0
Query:   92 LDMQDGMHIDISQELGRLKRTLHDAQRRILFRAEVATVKNCRKLLTIGCRMLHYTGIGKPSCLIFEKEKPLGETNILNIETLTELFAAGGVRT-----QLVFVSARHSEIVGRAFLAAGVRHVVAMKWDAKVSDRAACIFAEFFYLSIAMGRTVRQAFEVASTAAVTETGASGDDEQFLLLPAEGDHDLA-IFDDAEVGSFVDESPPPVPNTCDPPPVPFVGRNVAVQEVVGLLSMVSQGNRCITVRGRPGVGKTALASRVCQYLAERNLFDAIYLV---PLRRKVYGS---YEKETLCKVMGAAIGFEDASNEREIVFLLQDK--------HPSGRVIMVLDG-----PDRFFNRS--NSLVQVLSYLLSRIHGLHLLVTAEGSVLGSGSGRLESSSEKVVHLGPLSDVATAHMLANIAPPGFKLEEMMSRPYATKEEAYAELAASPVIRELRGHPKAIVMFAPLLEDHRLKDL--FEKAKLCYLEASTAAEIDLPSK 562
            LD+Q    +D+ +E   L + L +  +++ +R+EVA V   RK+++ GCR LH++G G P  +IFE      E + L+ + L  L  AG   +     +LVFVSA HSE V  AF++AGV HVV +  + KV D+ A  F++ FY ++  G +V ++FE+    A   + A     +F LL   GDH  + +F D  +G + D +PP   N CD     FVGR++   EV  + + + +G R + + G PG+GKT +A + CQY  +R LF+ I+ +   P +     +   Y    L K  G  +      +  E++  L D+          + + ++VLDG     P +   R+    L  ++S LL R+  L LLVT + S LG G+G      E+++ +  L  +  A +    AP   +L EM               +   V+  L GHP+ I   A LLE   L+DL   E+  L YL  S  A +D  SK
Sbjct:   32 LDLQPIEILDVKEERRLLLQCLQECGKQVRWRSEVADVHTFRKVISYGCRALHFSGHGVPGKVIFENGN--CEAHFLSQKELKTLLLAGVQGSPENTMRLVFVSACHSESVAEAFVSAGVPHVVVVPKEDKVLDQKAMEFSKAFYTALLAGHSVYKSFEIGQVQADIVSIADHHRSKFKLL-GNGDHAASHLFSDIPLGRYQDLTPPLPLNECDAVAEVFVGRSI---EVHAVYTALVEGARMVCLTGPPGIGKTEVALQSCQYATDRYLFERIFFLRFTPAKAPTASALRQYVLSRLAKSFGVPVDAAVDDDGDEVLTKLCDRIRDQLDSLGTAAKYLLVLDGCNAMFPSKALARTLLPELRSIISQLLRRVRSLSLLVTND-SRLGGGAGLDCGVGERIIPIERLPALDAALLFTVRAPRRLQLHEMGG--------DLGVFSRGLVMDALGGHPRTICAVAQLLE---LRDLQHDEREFLDYLIPSVIAGLDPTSK 512          
BLAST of NO05G01890 vs. NCBI_GenBank
Match: OQS07223.1 (hypothetical protein THRCLA_00772 [Thraustotheca clavata])

HSP 1 Score: 182.2 bits (461), Expect = 7.300e-42
Identity = 227/890 (25.51%), Postives = 378/890 (42.47%), Query Frame = 0
Query:   75 YLYSAPLV-HKAGGQAKEL----------DMQDGMHIDISQELGRLKRTLHDAQRRILFRAEVATVKNCRKLLTIGCRMLHYTGIGKPSCLIFEKEKPLGETNILNIETLTELFAAGGVRT-----QLVFVSARHSEIVGRAFLAAGVRHVVAMKWDAKVSDRAACIFAEFFYLSIAMGRTVRQAFEVASTAAVTETGASGDDEQFLLLPAEGDHDLA-IFDDAEVGSFVDESPPPVPNTCDPPPVPFVGRNVAVQEVVGLLSMVSQGNRCITVRGRPGVGKTALASRVCQYLAERNLFDAIYLV----PLRRKVYGSYEKETLCKVMGAAIGFEDASNE--REIVFLLQDKHPS--------GRVIMVLDGPDRFF---NRSNSLV----QVLSYLLSRIHGLHLLVTAEGSVLGSGSGRLESSSEKVVHLGPLSDVATAHMLANIAPPGFKLEEMMSRPYATKEEAYAELAASPVIRE-LRGHPKAIVMFAPLLEDHRLKDLFEKAKLCYLEASTAAEIDLPSKXXXXXXXXXXXXXSNFDAEAKELDASTLEKETEAARRFLRDPMSQRLWLEVVR------QGGARQSSSMHQGVPWYRLTDALQEELRGALVDALRMLRLQVTDSSAALSSSVTMKMSVGAFAGAGGVEESKAS---MSPSMPLSSVGTEAKEEGKGAEVSTYRRGGETDDDGLVRGLEPGDIQFI--------KDRLGARMPGNDLVKITDFSVFCEGWVP----VQKSIRLLCREWLCNSPRLVHGFLSRKETEDLLQGHKEGTFIFRFSTSHLGLLSISFVGKRPASISEKKTD----TDNAVIAPFRHFLVQVEEDRHCVVFMEPGRSRHASLEDLVMSSTSLLEFYPGVPKAQALVQMQK 901
            +L+S+PLV  +    +K L          D+Q    +D+ +E   L + L +  +++ +R+EVA V   RK ++ GCR LH++G G P  +IFE      E + L+ + L  L  AG   +     +LVFVSA HSE V  AF++AGV HVV +  + KV D+ A  F++ FY ++  G +V +AFE+    A   + A     +F LL   GDH  + +F D + G + D +P    N CD     FVGR++   EV  + + + +G R + + G  G+GKT +A + CQY  +R LF  I+ +    P     +  Y  + L K     I   +   E   ++   +++K  +         + ++V+DG +  F    ++ SL+     ++S LL R+  L LL+T++    G G+G      E+++ +  L  +  A +    AP   ++ EM             E+ +  VI E L GHP+ I   A LLE   LK   E+  L +L  +  A +D  S+              +       L  +   K T         P   R      +      Q  + +S S+H+G   +    ++  +            +LQV    + + S +T     G    A  V E K S       +  +   T+       A+  +     +     + R L    ++F+        K  L  +      V I  F  F   + P    +QKS     + W    PRL+HGF+S++ ++ +L     GTF+ RFS +    L + ++       S ++ +      NA    F  FL    +D + VV        + +L  LV+S   L   YP  PK    ++ Q+
Sbjct:    4 HLHSSPLVARQTTSVSKPLSTSCPFSFSSDLQPIEILDVKEERRLLLQCLQECGKQVCWRSEVADVHTFRKAVSYGCRALHFSGHGVPGKVIFENGS--CEAHFLSQQELKTLLLAGVQGSPENTMRLVFVSACHSESVAEAFVSAGVPHVVVVPKEDKVLDQKAMEFSKAFYTALLAGHSVYKAFEIGQVQADIVSIADHHQSKFKLL-GNGDHARSHLFSDIQPGKYHDLTPVLPVNECDAVAEVFVGRSI---EVHAVYTALVEGARMVCLTGPAGIGKTEIALQCCQYATDRYLFQRIFFLRFTAPKSSNSFRQYVLQRLAKSFCVPIPENEVDEEVLEQLCERIREKVDAFGSVSTTPAKCLLVIDGCNALFATKAQTTSLMPELRSIISQLLRRVRSLSLLLTSDYR-FGGGTGMDCGVGERIIPIERLPPMDAALLFTVRAPRRLQIHEM---------GGDLEMFSRGVIMEALGGHPRTICAVAQLLELRDLK-RDEREFLNFLIPAVIAGLDPSSRQDFANDYCPLLPYGHSHRRPPTLSKAASSKSTACLDLHNDTPAPLRKHSSFFQPKHDSEQTVSIESLSLHEG---HNGDHSMSPQ------------QLQVFAIRSHVQSYIT--SPEGCMIWAHAVVEYKQSPTIFDARLIHNVANTQTIPFEFIAQQISRFFASKVRQAAVERPLSSRCMEFLSSSTLIWGKQGLSPKKDRRGYVDIGMFGAFWSWFEPLIVCIQKS-----QVWAFKHPRLLHGFISKEASKAMLSNTVPGTFLLRFSETRKSCLVVVYM------TSSRRVEFVPIEFNATKGTFEIFL----QDENSVVV-------YPTLAKLVLSIHVLKLVYPNTPKEMVFIKSQE 837          
The following BLAST results are available for this feature:
BLAST of NO05G01890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28181.10.000e+076.38sh2 domain containing protein [Nannochloropsis gad... [more]
XP_005852744.11.700e-19293.97sh2 domain containing protein, partial [Nannochlor... [more]
XP_009035732.11.900e-5032.67hypothetical protein AURANDRAFT_63276 [Aureococcus... [more]
XP_009821618.12.000e-4727.40hypothetical protein H257_00575 [Aphanomyces astac... [more]
CBJ30255.14.900e-4634.27SH2 domain containing protein [Ectocarpus siliculo... [more]
XP_008862502.11.100e-4526.02hypothetical protein H310_01224 [Aphanomyces invad... [more]
XP_008612470.17.000e-4526.64hypothetical protein SDRG_08366 [Saprolegnia dicli... [more]
CBJ26135.11.100e-4233.94conserved unknown protein [Ectocarpus siliculosus][more]
OQR94502.11.500e-4231.66hypothetical protein ACHHYP_01246 [Achlya hypogyna... [more]
OQS07223.17.300e-4225.51hypothetical protein THRCLA_00772 [Thraustotheca c... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003679NSK003679Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G01890.1NO05G01890.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|584060gene_2980Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100004g114gene2366Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G01890.1NO05G01890.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G01890 ID=NO05G01890|Name=NO05G01890|organism=Nannochloropsis oceanica|type=gene|length=2715bp
ATGTTTGCCAGGTTTCACTTCCCGGGTTCTAGGTCTTCCAGAGACTCAGG
GGCAGCGGCAGCCAAGGATGGTGGGGGCAGCAGCAGCAGCAGCAGCAGTA
AGGATGGAACTCTTCGGCACGTCTCGACGCAGCTACAAGAACCCAACCCC
ACGCGGTCCCCATCGTTTATGCTTCACGGAGGCGGGATGCCCCAAGGGCC
ATTGGCGCCATGTCGTCTCGGATATCTGTACTCGGCGCCGCTGGTTCACA
AGGCTGGAGGACAGGCTAAGGAATTGGACATGCAGGACGGGATGCACATA
GACATTAGCCAGGAACTTGGACGGCTCAAGCGGACCTTGCACGATGCACA
ACGCCGCATTCTCTTTCGTGCCGAGGTGGCTACAGTGAAGAATTGTCGGA
AGCTCTTGACGATTGGCTGTCGGATGCTGCACTACACGGGAATTGGCAAG
CCATCTTGTCTGATTTTTGAGAAAGAGAAGCCTCTGGGGGAGACTAATAT
TCTCAACATTGAGACGCTGACAGAGCTCTTCGCCGCGGGCGGGGTACGGA
CACAGCTAGTGTTTGTGAGTGCACGGCATTCAGAGATTGTGGGGAGGGCG
TTTTTAGCGGCGGGTGTGCGGCATGTGGTAGCTATGAAATGGGATGCCAA
GGTCTCCGACCGCGCCGCTTGTATATTCGCTGAGTTTTTCTACCTGTCCA
TCGCGATGGGCCGCACCGTACGCCAGGCATTCGAAGTAGCATCAACGGCA
GCAGTGACGGAGACGGGGGCTTCGGGGGACGACGAGCAATTTCTGCTGTT
GCCTGCGGAGGGGGACCACGACCTAGCCATATTTGATGACGCGGAAGTGG
GGAGTTTCGTGGACGAATCTCCCCCACCAGTGCCGAATACCTGCGATCCC
CCTCCTGTGCCGTTTGTCGGGCGTAATGTCGCGGTGCAGGAGGTGGTGGG
GCTATTATCGATGGTTTCGCAAGGGAACCGTTGTATTACTGTGCGTGGGC
GGCCAGGGGTGGGAAAGACCGCCCTAGCTTCTCGTGTTTGCCAATATCTC
GCAGAGCGGAACTTATTTGATGCAATTTATCTCGTCCCTCTTCGAAGAAA
AGTTTACGGGTCGTATGAGAAAGAGACACTGTGCAAAGTCATGGGTGCAG
CGATCGGGTTTGAAGACGCGTCAAACGAGCGTGAGATCGTCTTCCTCCTC
CAAGACAAACACCCTTCCGGGCGCGTCATCATGGTCCTTGACGGACCCGA
CCGTTTCTTCAACCGATCCAATTCCCTCGTACAAGTCCTCTCCTACCTGC
TGTCACGTATCCATGGCCTCCACCTTCTAGTCACCGCAGAGGGCTCCGTC
CTAGGAAGTGGTTCTGGTCGTCTCGAAAGCTCCTCCGAAAAAGTCGTCCA
TCTCGGCCCGCTTTCCGACGTGGCAACAGCACACATGCTTGCAAACATTG
CTCCTCCTGGTTTCAAACTTGAGGAGATGATGAGTCGACCCTATGCGACG
AAAGAAGAGGCGTATGCAGAATTAGCGGCCTCGCCCGTGATTAGGGAATT
GCGGGGCCATCCGAAGGCGATTGTGATGTTTGCCCCTTTGCTCGAAGATC
ATCGATTAAAAGATTTATTCGAGAAGGCAAAGCTATGTTATCTTGAGGCA
AGTACGGCTGCTGAAATAGATTTGCCTTCGAAGGAGGAGGAAGAGGGGGG
AGGAGGGACGGGGGGGAGGAGGAGTAATTTTGATGCAGAGGCGAAGGAGT
TGGATGCGTCGACGCTGGAAAAGGAGACAGAGGCGGCGAGGAGATTTTTG
AGGGATCCCATGTCCCAGCGATTGTGGCTGGAAGTGGTGCGACAAGGGGG
GGCGAGGCAATCGAGTAGTATGCATCAAGGAGTGCCCTGGTATAGGCTGA
CGGATGCGCTGCAGGAGGAGTTGAGAGGGGCGTTGGTGGACGCGTTGAGG
ATGTTGAGGCTCCAAGTTACTGATTCCTCTGCTGCCCTTAGTAGTTCGGT
AACGATGAAGATGTCGGTTGGAGCTTTCGCTGGTGCTGGAGGGGTTGAGG
AGAGCAAGGCCTCCATGTCGCCCTCGATGCCCCTGTCGTCTGTGGGGACG
GAAGCGAAGGAGGAAGGAAAAGGCGCCGAGGTATCAACTTATAGGAGAGG
AGGGGAGACAGACGATGATGGACTGGTCCGTGGTTTGGAGCCGGGGGACA
TTCAGTTTATCAAAGATAGGTTGGGAGCCAGGATGCCGGGTAACGATTTG
GTGAAAATCACAGATTTTTCAGTCTTTTGCGAAGGGTGGGTACCGGTGCA
GAAGTCGATCCGGCTGCTCTGTCGGGAGTGGCTCTGTAATTCCCCCCGGC
TTGTGCATGGCTTTTTGTCGCGTAAGGAGACAGAGGACTTGCTTCAAGGC
CACAAGGAGGGCACTTTTATCTTTCGCTTTAGCACAAGCCATTTGGGCTT
GTTGTCCATTTCGTTCGTCGGCAAACGGCCTGCCTCGATTAGTGAAAAGA
AAACGGACACAGATAATGCTGTGATAGCTCCATTCCGGCATTTTCTGGTT
CAAGTGGAGGAGGACAGGCACTGTGTGGTGTTCATGGAACCCGGCCGCTC
CCGGCATGCGTCATTGGAGGATTTGGTCATGTCTTCCACCAGTTTGCTTG
AGTTTTATCCGGGTGTACCTAAGGCACAGGCATTGGTGCAGATGCAGAAG
TACAAGAACGATTAG
back to top

protein sequence of NO05G01890.1

>NO05G01890.1-protein ID=NO05G01890.1-protein|Name=NO05G01890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=905bp
MFARFHFPGSRSSRDSGAAAAKDGGGSSSSSSSKDGTLRHVSTQLQEPNP
TRSPSFMLHGGGMPQGPLAPCRLGYLYSAPLVHKAGGQAKELDMQDGMHI
DISQELGRLKRTLHDAQRRILFRAEVATVKNCRKLLTIGCRMLHYTGIGK
PSCLIFEKEKPLGETNILNIETLTELFAAGGVRTQLVFVSARHSEIVGRA
FLAAGVRHVVAMKWDAKVSDRAACIFAEFFYLSIAMGRTVRQAFEVASTA
AVTETGASGDDEQFLLLPAEGDHDLAIFDDAEVGSFVDESPPPVPNTCDP
PPVPFVGRNVAVQEVVGLLSMVSQGNRCITVRGRPGVGKTALASRVCQYL
AERNLFDAIYLVPLRRKVYGSYEKETLCKVMGAAIGFEDASNEREIVFLL
QDKHPSGRVIMVLDGPDRFFNRSNSLVQVLSYLLSRIHGLHLLVTAEGSV
LGSGSGRLESSSEKVVHLGPLSDVATAHMLANIAPPGFKLEEMMSRPYAT
KEEAYAELAASPVIRELRGHPKAIVMFAPLLEDHRLKDLFEKAKLCYLEA
STAAEIDLPSKEEEEGGGGTGGRRSNFDAEAKELDASTLEKETEAARRFL
RDPMSQRLWLEVVRQGGARQSSSMHQGVPWYRLTDALQEELRGALVDALR
MLRLQVTDSSAALSSSVTMKMSVGAFAGAGGVEESKASMSPSMPLSSVGT
EAKEEGKGAEVSTYRRGGETDDDGLVRGLEPGDIQFIKDRLGARMPGNDL
VKITDFSVFCEGWVPVQKSIRLLCREWLCNSPRLVHGFLSRKETEDLLQG
HKEGTFIFRFSTSHLGLLSISFVGKRPASISEKKTDTDNAVIAPFRHFLV
QVEEDRHCVVFMEPGRSRHASLEDLVMSSTSLLEFYPGVPKAQALVQMQK
YKND*
back to top
Synonyms
Publications