NO05G01770, NO05G01770 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G01770 vs. NCBI_GenBank
Match: EWM28304.1 (fatty-acyl [Nannochloropsis gaditana]) HSP 1 Score: 530.8 bits (1366), Expect = 2.800e-147 Identity = 249/304 (81.91%), Postives = 278/304 (91.45%), Query Frame = 0 Query: 1 MKWVLQEGVDFKPHGPNSRGTMYTQMFQVLPALEPFYMNWEKTYDSAIVFDWMKSVPWVPILAVVVYVVGIFGGQAIMKNKKPFDLKWPLAYWNLALSIFSIMGVIRVVPHLVYLTATKGLSVVACGAPEPLYGNAAVGFWVQAFILSKLAELIDTVFIVLRKKPLQFLHWYHHVTVLLFTWFCYTKENPGIIFVAMNYSVHAIMYGYYFLMAIQVRPSWLKPIYITMMQISQMVVGVATAVFYIYKIRSGETCAVDQELLIACGVMYSTYLYLFCEFAVKRFILG-----GQGAAGAPKGKTK 300 MKW+L+EG+DF+P GPNSRG+ +TQ+FQV+PA+EPFYM WEK YDS+ V++WMKSVPWVPI V++YVVGIFGGQA+MKN+KPFDLKWPLAYWNLALS+FSIMG++RVVPHL+YLTATKGL VVACGAPEPLYGNAAVGFWVQAFILSKLAELIDT FIVLRKKPLQFLHWYHHVTVLLFTWFCYT ENPGIIFVAMNYSVHAIMYGYYFLMA++VRPSWLKP +IT+MQISQMVVGVATA FYI KIR+GE CAVDQ+LL+ACGVMYSTYLYLFCEFAV+RFILG G AG K K + Sbjct: 19 MKWILREGIDFQPEGPNSRGSTFTQLFQVIPAIEPFYMEWEKKYDSSPVYEWMKSVPWVPIAGVILYVVGIFGGQALMKNRKPFDLKWPLAYWNLALSLFSIMGMVRVVPHLIYLTATKGLGVVACGAPEPLYGNAAVGFWVQAFILSKLAELIDTAFIVLRKKPLQFLHWYHHVTVLLFTWFCYTHENPGIIFVAMNYSVHAIMYGYYFLMAVRVRPSWLKPQFITLMQISQMVVGVATAAFYIMKIRAGEECAVDQDLLVACGVMYSTYLYLFCEFAVRRFILGPKKETAPGKAGVSKMKAQ 322
BLAST of NO05G01770 vs. NCBI_GenBank
Match: EWM29833.1 (elongation of very long chain fatty acids protein 6 [Nannochloropsis gaditana]) HSP 1 Score: 263.8 bits (673), Expect = 6.300e-67 Identity = 131/269 (48.70%), Postives = 183/269 (68.03%), Query Frame = 0 Query: 23 YTQMFQVLPALEPFYMNWEKTYDSAIVFDWMKSVPWVPILAVVVYVVGIFGGQAIMKNKK-----PFDLKWPLAYWNLALSIFSIMGVIRVVPHLVYLTATKGLSVVACGAPEPL-YGNAAVGFWVQAFILSKLAELIDTVFIVLRKKPLQFLHWYHHVTVLLFTWFCYTKENPGIIFVAMNYSVHAIMYGYYFLMAIQVRPSWLKPIYITMMQISQMVVGV-ATAVFYIYKIRSGETCAVDQELLIACGVMYSTYLYLFCEFAVKRFI 285 + Q+FQ +PALEPFY WEK +D + F ++ WVPI+AV++Y+ + G+ ++ +K P +L + A WN L++FSI G +RVVPH ++L K C AP+ YG+ A G WV F +SK+ EL+DTV +VL+ K FLHWYHHVTVLL+TWF Y+ NPG+ F+AMNY+VHA+MY YYFLM +++ P WL P++IT+MQISQM+VGV TA Y Y ++ +CAV ++L+ C MY+TYLY F EF V+RF+ Sbjct: 27 FVQVFQAIPALEPFYTEWEKHFDVSAPFRAIRDSKWVPIMAVILYLSFLVEGKKYIERRKKEGKGPVNLGYFPALWNGFLALFSIAGALRVVPHFLFLFTHKDFKETVCEAPDAAGYGDGAAGLWVMLFTVSKVFELMDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGLYFIAMNYTVHAVMYSYYFLMELRLWPKWLSPVFITLMQISQMLVGVGVTAAAYSY--QADPSCAVVRDLIPWCAAMYATYLYFFVEFFVERFL 293
BLAST of NO05G01770 vs. NCBI_GenBank
Match: XP_002293395.1 (long chain fatty acid elongase [Thalassiosira pseudonana CCMP1335] >EED89131.1 long chain fatty acid elongase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 254.2 bits (648), Expect = 5.000e-64 Identity = 130/273 (47.62%), Postives = 170/273 (62.27%), Query Frame = 0 Query: 15 GPNSRGTMYTQMFQVLPALEPFYMNWEKTYDSAIVFDWMKSVPWVPILAVVVYVVGIFGGQAIMKNKKPFDLKWPLAYWNLALSIFSIMGVIRVVPHLVYLTATKGLSVVACGAPEPLYGNAAVGFWVQAFILSKLAELIDTVFIVLRKKPLQFLHWYHHVTVLLFTWFCYTKENP-GIIFVAMNYSVHAIMYGYYFLMAIQVRPSWLKPIYITMMQISQMVVGVATAV--FYIYKIR-SGETCAVDQELLIACGVMYSTYLYLFCEFAVKRF 284 G N G Y + + P L Y+ +E+ YD WM+ P +PI+A V YVV I G+A MK++ + + LA WNL+LS+FS +G IR P L Y T L C P LYG+ + G WVQ FILSK EL+DT FIV+ KKPL FLHWYHH+TVLL+ W Y +P G+ FV MNYSVHA+MYGYYFLMA++ RP W P+++T MQ+SQM +GV + FY Y G+TC + +E +A VMY +Y YLF +F V R+ Sbjct: 14 GTNGLGVHYAEFSCLHPLLGATYLPFERFYDPVATLTWMQDRPMIPIIACVAYVVLIVLGRAYMKDRPAWSWRRILAVWNLSLSLFSWIGAIRTAPQLYYNLTTYSLRDNLCDDPAALYGSGSTGLWVQLFILSKFPELLDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPSGLFFVVMNYSVHAVMYGYYFLMAVKFRPKWFNPMFVTFMQLSQMFIGVGVTIVAFYYYSNPILGKTCHIRKENNVAAFVMYGSYFYLFAQFFVARY 286
BLAST of NO05G01770 vs. NCBI_GenBank
Match: GAX19603.1 (elongation of very long chain fatty acids protein 6 [Fistulifera solaris]) HSP 1 Score: 253.8 bits (647), Expect = 6.500e-64 Identity = 126/268 (47.01%), Postives = 168/268 (62.69%), Query Frame = 0 Query: 17 NSRGTMYTQMFQVLPALEPFYMNWEKTYDSAIVFDWMKSVPWVPILAVVVYVVGIFGGQAIMKNKKPFDLKWPLAYWNLALSIFSIMGVIRVVPHLVYLTATKGLSVVACGAPEPLYGNAAVGFWVQAFILSKLAELIDTVFIVLRKKPLQFLHWYHHVTVLLFTWFCYTKENP-GIIFVAMNYSVHAIMYGYYFLMAIQVRPSWLKPIYITMMQISQMVVGVATAVFYIYKIRSGETCAVDQELLIACGVMYSTYLYLFCEFAVKRF 284 N Y + + P +E Y ++EK YD + +WMK P +P+ A ++Y V I+ GQA + ++ + LA WNL LS+FS +G++R PHL + C P YG+ + G WVQ FILSK ELIDT FIV+ KKPL FLHWYHH+TVLL+ W Y +P GIIF AMNY+VHA MYGYYFLMA++++P W P+ IT MQISQMVVGVAT + Y + CA+D+ IA +MY +YL+LFC+F R+ Sbjct: 10 NGDNLEYREFSCLYPQVEHLYTSFEKFYDPIPLLNWMKGQPGIPVAACIIYAVSIYYGQAYFAKRDRWNWRNTLAVWNLFLSVFSFVGMLRTAPHLFHNLTHLSFRDNMCLDPRTTYGSGSTGLWVQLFILSKFPELIDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPTGIIFTAMNYTVHATMYGYYFLMALRMKPKWFNPMVITAMQISQMVVGVATTIVSYYYFLTDAECALDRGNNIAAFLMYGSYLFLFCQFFFSRY 277
BLAST of NO05G01770 vs. NCBI_GenBank
Match: GAX09713.1 (elongation of very long chain fatty acids protein 6 [Fistulifera solaris]) HSP 1 Score: 247.7 bits (631), Expect = 4.700e-62 Identity = 121/246 (49.19%), Postives = 161/246 (65.45%), Query Frame = 0 Query: 39 NWEKTYDSAIVFDWMKSVPWVPILAVVVYVVGIFGGQAIMKNKKPFDLKWPLAYWNLALSIFSIMGVIRVVPHLVYLTATKGLSVVACGAPEPLYGNAAVGFWVQAFILSKLAELIDTVFIVLRKKPLQFLHWYHHVTVLLFTWFCYTKENP-GIIFVAMNYSVHAIMYGYYFLMAIQVRPSWLKPIYITMMQISQMVVGVATAVFYIYKIRSGETCAVDQELLIACGVMYSTYLYLFCEFAVKRF 284 ++EK YD + +WMK P +P+ A ++Y V I+ GQA + ++ ++ LA WNL LS+FS +G++R PHL + C P YG+ + G WVQ FILSK ELIDT FIV+ KKPL FLHWYHH+TVLL+ W Y +P GIIF AMNY+VHA MYGYYFLMA++++P W P+ IT MQISQMVVGVAT + Y + CA+D+ IA +MY +YL+LFC+F R+ Sbjct: 24 SFEKFYDPIPLLNWMKGQPGIPVAACIIYAVSIYYGQAYFAKRDRWNWRYTLAVWNLFLSVFSFVGMLRTAPHLFHNLTHLSFRDNMCLDPRTTYGSGSTGLWVQLFILSKFPELIDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPTGIIFTAMNYTVHATMYGYYFLMALRMKPKWFNPMVITAMQISQMVVGVATTIVSYYYFLTDAECALDRGNNIAAFLMYGSYLFLFCQFFFSRY 269
BLAST of NO05G01770 vs. NCBI_GenBank
Match: OEU18932.1 (GNS1/SUR4 membrane protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 244.6 bits (623), Expect = 4.000e-61 Identity = 127/273 (46.52%), Postives = 172/273 (63.00%), Query Frame = 0 Query: 15 GPNSRGTMYTQMFQVLPALEPFYMNWEKTYDSAIVFDWMKSVPWVPILAVVVYVVGIFGGQAIMKNKKPFDLKWPLAYWNLALSIFSIMGVIRVVPHLVYLTATKGLSVVAC-GAPEPL--YGNAAVGFWVQAFILSKLAELIDTVFIVLRKKPLQFLHWYHHVTVLLFTWFCYTKENP-GIIFVAMNYSVHAIMYGYYFLMAIQVRPSWLKPIYITMMQISQMVVGVATAVFYIYKIRSGETCAVDQELLIACGVMYSTYLYLFCEFAVKRF 284 G N G Y + P LEPFY +EK YD + +WM+ +P+ AV++Y V I GQ M+N++PF+L+ +A+WNLALS+FS +G+ R +P L++ + C + E + YG+ + G W F+LSK ELIDT FIV+ KKPL FLHWYHH+TVLL+ W Y +P GI F MNYSVHA MYGYYFLMA+++RP W PI IT+ QISQMVVGV+ + Y ++ TC + E A VMY +YL+LF +F R+ Sbjct: 11 GINGAGIAYREFSCEYPQLEPFYFEFEKNYDPIPLLEWMRYHSMIPVYAVILYGVLITVGQYAMRNREPFNLRRLMAFWNLALSVFSWIGMFRTLPQLLHNLYHLSMRDNLCMDSRETIASYGSGSSGLWFLLFVLSKFPELIDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPLGIFFSVMNYSVHASMYGYYFLMAMKMRPKWFNPIIITIFQISQMVVGVSVTLAGFYYYKTDPTCGIQNENNTAAFVMYGSYLFLFLQFFFGRY 283
BLAST of NO05G01770 vs. NCBI_GenBank
Match: EWM25754.1 (fatty-acyl elongase [Nannochloropsis gaditana]) HSP 1 Score: 243.0 bits (619), Expect = 1.200e-60 Identity = 124/285 (43.51%), Postives = 181/285 (63.51%), Query Frame = 0 Query: 18 SRGTMYT--QMFQVLPALEPFYMNWEKTYDSAIVFDWMKSVPWVPILAVVVYVVGIFGGQAIMKNKKPFDLKWPLAYWNLALSIFSIMGVIRVVPHLVYLTATKGLSVVACGAPEPLYGNAAVGFWVQAFILSKLAELIDTVFIVLRKKPLQFLHWYHHVTVLLFTWFCYTKENPGIIFVAMNYSVHAIMYGYYFLMAIQVRPSWLKPIYITMMQISQMVVGVATAVFYIYKIRSGETCAVDQELLIACGVMYSTYLYLFCEFAVKRFILGGQGAAGAPKGKTKA 301 +R T Y+ Q +Q+ P LE FY +EK ++ +F+++ WV +++ +Y+ IMK + +L PLA WNL L+++S +G +RVVPHL++ +T C AP + G+ A G WV F LSK+AELID+++I L+ + FLHWYHHV+VL FTW + +PG+ F+AMNY+VH++MY YYFLMAI+ +P WL PIYIT MQI+QM+VGV + F Y +CAVD +L V+Y++YLYLF +F +KRF + + A +GK A Sbjct: 32 ARNTTYSFIQFWQLYPWLENFYAPFEKNFNPLPIFEFVSGNWWVVYISLAIYMXXXXXLPMIMKKRPLKNLSTPLACWNLFLAVYSTIGAVRVVPHLLWFMSTHTFKQTVCTAPYYINGDGATGLWVTLFTLSKVAELIDSLWICLKGRRPIFLHWYHHVSVLYFTWAAHEAAHPGMYFIAMNYTVHSVMYTYYFLMAIKAKPKWLNPIYITFMQIAQMLVGVIISCFGFYYSSMDASCAVDPFVLKVSAVIYASYLYLFMQFMIKRFFV--KNARAGQEGKVAA 314
BLAST of NO05G01770 vs. NCBI_GenBank
Match: GAX19602.1 (elongation of very long chain fatty acids protein 6 [Fistulifera solaris]) HSP 1 Score: 242.7 bits (618), Expect = 1.500e-60 Identity = 119/282 (42.20%), Postives = 172/282 (60.99%), Query Frame = 0 Query: 17 NSRGTMYTQMFQVLPALEPFYMNWEKTYDSAIVFDWMKSVPWVPILAVVVYVVGIFGGQAIMKNKKPFDLKWPLAYWNLALSIFSIMGVIRVVPHLVYLTATKGLSVVACGAPEPLYGNAAVGFWVQAFILSKLAELIDTVFIVLRKKPLQFLHWYHHVTVLLFTWFCYTKENP-GIIFVAMNYSVHAIMYGYYFLMAIQVRPSWLKPIYITMMQISQMVVGVATAVF--YIYKIRSGETCAVDQELLIACGVMYSTYLYLFCEFAVKRFILGGQGAAGAPK 296 NS Y + P Y+ +E YD DWMK WVP+ ++Y + IF G++ + + ++ + PLA WN LS+FS +G +RV P +++ + L C PE G+ A GFW Q F+LSK+ EL DT FIV+ KKPL FLHWYHH++VLLFTW Y +P G F++MNY VHA+MY YYFLMA++++P W PI+IT+ QISQM VGV V+ YI + E C + +++ + VMY +YL+LFC+F +R+ + G+ + + K Sbjct: 22 NSGNQKYLDFACLFPTFGKTYLPFELNYDPVGPRDWMKDNFWVPVACAIIYAIAIFWGRSYFEKRAAWNWRAPLALWNFGLSLFSTIGFLRVAPFVLFNIYSYTLRENCCFDPESHVGSGATGFWSQMFVLSKIPELFDTFFIVIHKKPLMFLHWYHHISVLLFTWHAYVNNSPTGAFFISMNYGVHAMMYFYYFLMAVRMKPKWFNPIWITVAQISQMFVGVFLTVYTTYILHVEEREDCLMRKDINQSALVMYGSYLFLFCKFFFERYYIRGKPSKTSKK 303
BLAST of NO05G01770 vs. NCBI_GenBank
Match: EWM25755.1 (fatty-acyl elongase [Nannochloropsis gaditana]) HSP 1 Score: 241.5 bits (615), Expect = 3.400e-60 Identity = 119/261 (45.59%), Postives = 163/261 (62.45%), Query Frame = 0 Query: 23 YTQMFQVLPALEPFYMNWEKTYDSAIVFDWMKSVPWVPILAVVVYVVGIFGGQAIMKNKKPFDLKWPLAYWNLALSIFSIMGVIRVVPHLVYLTATKGLSVVACGAPEPLYGNAAVGFWVQAFILSKLAELIDTVFIVLRKKPLQFLHWYHHVTVLLFTWFCYTKENPGIIFVAMNYSVHAIMYGYYFLMAIQVRPSWLKPIYITMMQISQMVVGVATAVFYIYKIRSGETCAVDQELLIACGVMYSTYLYLFCEFAVKRF 284 + Q +Q+ P EPFY EK +D + ++ + W+P++++++Y + I +K+P LAYWNL L+ FSI+G +R+VPHL++ T C PE + G+ A G W F LSKL EL+DT+F+ L+ + FLHWYHHVTVL FTW Y+ +PG+ F+AMNY+VHA+MY YYFLMAI+ +P WL PIYIT +QI QMV GV V+ R TC V +L V+Y +YLYLF EF VKRF Sbjct: 37 FLQFWQLFPWSEPFYTRLEKEFDVRPWYLFVHANGWLPVVSIILYAAMVLLLPPI-TSKRPVKCDTALAYWNLLLAAFSILGALRIVPHLLWFLTTHSFKETVCTPPERMNGDGASGLWCLLFTLSKLVELVDTMFVCLKGRKPIFLHWYHHVTVLSFTWAAYSARHPGMYFIAMNYTVHAVMYSYYFLMAIKAKPKWLNPIYITFLQIFQMVAGVIITVYGFIYARDPSTCGVVPSVLYFQSVIYGSYLYLFLEFLVKRF 296
BLAST of NO05G01770 vs. NCBI_GenBank
Match: ACV21066.1 (fatty acid elongase [Nannochloropsis oculata]) HSP 1 Score: 240.7 bits (613), Expect = 5.700e-60 Identity = 131/278 (47.12%), Postives = 170/278 (61.15%), Query Frame = 0 Query: 23 YTQMFQVLPALEPFYMNWEKT-YDSAIVFDWMKSVPWVPILAVVVYVVGIFGGQAIMKNKKPFDLKWPLAYWNLALSIFSIMGVIRVVPHLVYLTATKGLSVVACGAPEPLYGNAAVGFWVQAFILSKLAELIDTVFIVLRKKPLQFLHWYHHVTVLLFTWFCY-TKENPGIIFVAMNYSVHAIMYGYYFLMAIQVRPSWLKPIYITMMQISQMVVGV---ATAVFYIYKIRSGETCAVDQELLIACGVMYSTYLYLFCEFAVKRFILGGQGAAGAPK 296 +TQ+FQ P L+P Y +EK Y S V + P +P+ +Y + I G +M ++ + K LA WNL LSIFS G+IR VPHL++ AT C P YG A G WV FI SK+ EL+DTVFIV RK LQFLHWYHH+TVLLF W Y + G+ FVAMNYSVHAIMY YY+L AI P W+ P IT+ QISQM+VGV A++ +++Y E C V ++ + A +MY +YLYLFC+F V+RF+ GG+ G K Sbjct: 33 FTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLY--TDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRFLRGGKPRLGEEK 308 The following BLAST results are available for this feature:
BLAST of NO05G01770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G01770 ID=NO05G01770|Name=NO05G01770|organism=Nannochloropsis oceanica|type=gene|length=3440bpback to top protein sequence of NO05G01770.1 >NO05G01770.1-protein ID=NO05G01770.1-protein|Name=NO05G01770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=302bpback to top Synonyms
Publications
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