NO05G01410, NO05G01410 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G01410 vs. NCBI_GenBank
Match: EWM28305.1 (tpr repeat protein [Nannochloropsis gaditana]) HSP 1 Score: 430.6 bits (1106), Expect = 5.000e-117 Identity = 217/309 (70.23%), Postives = 244/309 (78.96%), Query Frame = 0 Query: 43 TPRHKPLQLPPIPAAWRLMLLAL--LWPVTSLXXXXXXXXXXXXXXXXXTTVADEKTPKIDLSTISKLQDQAFSATNRFQWKEAERAWTRVIDVDPENAAAISNRGNTRTSMGLCKEAKEDFNRAIELAPNEPDPNLGRGVAEECLGEFEAALGDYAEANKKNIALTGREDPVTYNNRANAEAGLGRWEDAVRDYKRAAKMQPGYVFPLASAALASYQIGDDAEAIKQMRLLLVKYPELVDMKAALAVIYWKQGDFAKAETAWYNVLNEDPRYRRLEWVRAVRRWPPRMVEELDAFLNFKLPGASKAAK 350 T + L P +P+AWRL+LL+L L + + + PKIDL TISKLQ+QAF ATNRFQWKEA+RAWT+VID+DPENAAAISNRGNTRTSMGLC EAKEDF+RAI LAP EPDPNLGRGVAEECLG++EAAL DYAEAN+KN+ALTG+EDPVTYNNRA AKMQPGYVFPLASAALASYQ+GDDAEAIKQMRLLLVKYP+LVDM+AALAVIYWK+GDF+KAETAWYN +NEDPRYRR+EWVR VRRWPPRM+EELDAFLN KLPG+SKAAK Sbjct: 53 TCQRSALSPPVLPSAWRLVLLSLFGLRSPADAAVALSTSTLAQEIQATESPITRTQNPKIDLVTISKLQEQAFQATNRFQWKEADRAWTKVIDLDPENAAAISNRGNTRTSMGLCAEAKEDFDRAIALAPKEPDPNLGRGVAEECLGQYEAALQDYAEANRKNVALTGKEDPVTYNNRAXXXXXXXXXXXXXXXXXXXAKMQPGYVFPLASAALASYQLGDDAEAIKQMRLLLVKYPQLVDMRAALAVIYWKEGDFSKAETAWYNAINEDPRYRRIEWVRTVRRWPPRMIEELDAFLNLKLPGSSKAAK 361
BLAST of NO05G01410 vs. NCBI_GenBank
Match: OSX71708.1 (hypothetical protein BU14_0507s0006 [Porphyra umbilicalis]) HSP 1 Score: 223.8 bits (569), Expect = 9.300e-55 Identity = 121/258 (46.90%), Postives = 154/258 (59.69%), Query Frame = 0 Query: 102 LSTISKLQDQAFSATNRFQWKEAERAWTRVIDVDPENAAAISNRGNTRTSMGLCKEAKEDFNRAIELAPNEPDPNLGRGVAEECLGEFEAALGDYAEANKKNIALTGREDPVTYNNRANAEAG----LGR-------------WEDAVRDYKRAAKMQPGYVFPLASAALASYQIGDDAEAIKQMRLLLVKYPELVDMKAALAVIYWKQGDFAKAETAWYNVLNEDPRYRRLEWVRAVRRWPPRMVEELDAFLNFKLP 343 L +++LQ AF TN +++ AE WTR+I ++ NAAA SNRGN RTS G +A EDF++AI LAP EPDP LGRGVA E L E+ AL DYA AN ++A ED V YNN NA AG LGR W A Y RAA M YVF A+ ALA Y++G+ A +++ ++ L +K+P+ DM A LA YW QG A AE W V+++D RY LEWV VRRWPP +V EL F+ + P Sbjct: 44 LRRVTELQKLAFDYTNEMRYERAETIWTRIIGLNESNAAAWSNRGNCRTSQGRFADAIEDFDKAIALAPTEPDPYLGRGVAREGLREYAGALEDYAAANAASVAKYKTEDQVAYNNMGNAHAGQAAVLGRSADPDAPAAARREWTAAAELYHRAASMDRNYVFASANEALALYELGETARSLRLVKYLCLKFPQFADMHAVLAAAYWSQGRSADAEAEWAKVIDQDTRYGNLEWVEDVRRWPPVLVAELKNFVELRRP 301
BLAST of NO05G01410 vs. NCBI_GenBank
Match: WP_094559049.1 (tetratricopeptide repeat protein [Synechococcus sp. 8F6]) HSP 1 Score: 179.1 bits (453), Expect = 2.600e-41 Identity = 95/233 (40.77%), Postives = 140/233 (60.09%), Query Frame = 0 Query: 105 ISKLQDQAFSATNRFQWKEAERAWTRVIDVDPENAAAISNRGNTRTSMGLCKEAKEDFNRAIELAPNEPDPNLGRGVAEECLGEFEAALGDYAEANKKNIALTGREDPVTYNNRANAEAGLGRWEDAVRDYKRAAKMQPGYVFPLASAALASYQIGDDAEAIKQMRLLLVKYPELVDMKAALAVIYWKQGDFAKAETAWYNVLNEDPRYRRLEWVRAVRRWPPRMVEELDAFL 338 + +L DQA SA+ ++ EA W +V++V P +AAA SNRGN + ++G + A D +A+ L + PDP+L RG AEE LGE+ AA DY ++ + G N N + LG WE A R ++ A+ +PG+ +SAALA++Q+GD AEA +++R L+ +YP D +AAL + W++G +AE+ W DPRYR+ EW+R+ RRWPP VE L FL Sbjct: 15 LPQLFDQALSASREGRFSEALPLWNQVLEVAPNDAAAWSNRGNVQLALGDPRAAIADQTKAMALDGDSPDPHLNRGTAEEALGEWAAAEADYRWILERAPSDAGEPRASALYNLGNVQGSLGDWEAARRCFEAASLARPGFAMARSSAALAAFQLGDRAEAERELRNLIRRYPLFADARAALTALLWQKGASGEAESNWAAASGLDPRYRQQEWLRSTRRWPPEPVEALAQFL 247
BLAST of NO05G01410 vs. NCBI_GenBank
Match: WP_106632927.1 (tetratricopeptide repeat protein [Cyanobium sp. Tous-2] >PSJ04059.1 hypothetical protein C7K55_11775 [Cyanobium sp. Tous-2]) HSP 1 Score: 173.7 bits (439), Expect = 1.100e-39 Identity = 91/233 (39.06%), Postives = 140/233 (60.09%), Query Frame = 0 Query: 105 ISKLQDQAFSATNRFQWKEAERAWTRVIDVDPENAAAISNRGNTRTSMGLCKEAKEDFNRAIELAPNEPDPNLGRGVAEECLGEFEAALGDYAEANKKNIALTGREDPVTYNNRANAEAGLGRWEDAVRDYKRAAKMQPGYVFPLASAALASYQIGDDAEAIKQMRLLLVKYPELVDMKAALAVIYWKQGDFAKAETAWYNVLNEDPRYRRLEWVRAVRRWPPRMVEELDAFL 338 + +L DQA SA+ + ++ EA W +V++V P++AAA SNRGN + ++G + A D +A++L PDP+L RG AEE LG++ AA DY ++ + G N N + LG W++A R ++ A+ +PG+ +S+ALA++Q+ D AEA +Q+R L+ +YP D +A L + W++G +AE+ W DPRYR+ EW+ A RRWPP VE L FL Sbjct: 16 LPQLFDQALSASRQGRFDEALPLWNQVLEVAPDDAAAWSNRGNVQLALGDPRAAIADQTKAMQLDGESPDPHLNRGTAEEALGQWAAAEADYRWILERAPSDEGEPRASALYNLGNVQGSLGDWQEARRCFEAASLARPGFAMARSSSALAAFQLSDRAEAERQLRNLIRRYPLFADARAGLTALLWQKGARGEAESNWAAASGLDPRYRQREWLLATRRWPPEPVEALAQFL 248
BLAST of NO05G01410 vs. NCBI_GenBank
Match: WP_032513611.1 (tetratricopeptide repeat protein [Prochlorococcus marinus] >KGF92103.1 TPR repeat precursor [Prochlorococcus marinus str. MIT 9107] >KGF92233.1 TPR repeat precursor [Prochlorococcus marinus str. MIT 9116] >KGF94312.1 TPR repeat precursor [Prochlorococcus marinus str. MIT 9123]) HSP 1 Score: 162.5 bits (410), Expect = 2.500e-36 Identity = 89/246 (36.18%), Postives = 134/246 (54.47%), Query Frame = 0 Query: 98 PKIDLSTISKLQDQAFSATNRFQWKEAERAWTRVIDVDPENAAAISNRGNTRTSMGLCKEAKEDFNRAIELAPNEPDPNLGRGVAEECLGEFEAALGDY---AEANKKNIALTGREDPVTYNNRANAEAGLGRWEDAVRDYKRAAKMQPGYVFPLASAALASYQIGDDAEAIKQMRLLLVKYPELVDMKAALAVIYWKQGDFAKAETAWYNVLNEDPRYRRLEWVRAVRRWPPRMVEELDAFLNFK 341 P LS L A ++ + A + W R ID P++AA +SNRGN R +G + + +D N+AI L PNE DP + RG+AEE LG + A DY + KN + N AN E WE A + +AA PG+ +S ALA +Q+G+ ++ K+++ L+ +YP D +AAL + W +G+F KAE+ W V DPRY EW++ +RRWPP+ +++L F++ K Sbjct: 25 PSYSLSLREDLFKNALDLSSGGNFNLALQEWNRYIDSYPDDAAGLSNRGNVRLVIGDIEGSIDDQNKAITLNPNEIDPYINRGIAEEALGLWSQAKKDYMFVISQDSKNFS--------ALYNLANVEGSTSEWEKARDLFSKAALSNPGFAMARSSMALADFQLGNIDKSEKELKNLIRRYPTFADARAALTALNWSKGEFGKAESNWIAVTELDPRYSDEEWLKKIRRWPPKPIKDLMKFIDLK 262
BLAST of NO05G01410 vs. NCBI_GenBank
Match: KGG02245.1 (TPR repeat precursor [Prochlorococcus marinus str. MIT 9311]) HSP 1 Score: 161.8 bits (408), Expect = 4.300e-36 Identity = 90/247 (36.44%), Postives = 137/247 (55.47%), Query Frame = 0 Query: 98 PKIDLSTISKLQDQAFSATNRFQWKEAERAWTRVIDVDPENAAAISNRGNTRTSMGLCKEAKEDFNRAIELAPNEPDPNLGRGVAEECLGEFEAALGDY----AEANKKNIALTGREDPVTYNNRANAEAGLGRWEDAVRDYKRAAKMQPGYVFPLASAALASYQIGDDAEAIKQMRLLLVKYPELVDMKAALAVIYWKQGDFAKAETAWYNVLNEDPRYRRLEWVRAVRRWPPRMVEELDAFLNFK 341 P LS L A ++ Q+ A + W +D P++AAA+SNRGN R +G + + +D N+AI L PNE DP + RG+AEE LG + A DY ++ NK AL N AN E +WE A + +AA PG+ +S ALA +Q+G+ E+ K+++ L+ +YP D +AAL + W G++ KAE+ W V DPRY +W++ +RRWPP+ +++L F++ K Sbjct: 29 PCYSLSLREDLFKNAIDLSSGGQFNLALQEWNHYLDSYPDDAAALSNRGNVRLVIGDVEGSIDDQNKAIGLNPNEIDPYINRGIAEEALGLWSQAKKDYMFVISQDNKNFSAL---------YNLANVEGSASQWEKARDLFSKAATYNPGFAMARSSMALADFQLGNIDESEKELKKLIRRYPTFADARAALTALNWYNGEYGKAESNWIAVTELDPRYSDEKWLKTIRRWPPKPIKDLMNFIDLK 266
BLAST of NO05G01410 vs. NCBI_GenBank
Match: WP_011377249.1 (hypothetical protein [Prochlorococcus marinus] >ABB50768.1 TPR repeat [Prochlorococcus marinus str. MIT 9312]) HSP 1 Score: 161.8 bits (408), Expect = 4.300e-36 Identity = 90/247 (36.44%), Postives = 137/247 (55.47%), Query Frame = 0 Query: 98 PKIDLSTISKLQDQAFSATNRFQWKEAERAWTRVIDVDPENAAAISNRGNTRTSMGLCKEAKEDFNRAIELAPNEPDPNLGRGVAEECLGEFEAALGDY----AEANKKNIALTGREDPVTYNNRANAEAGLGRWEDAVRDYKRAAKMQPGYVFPLASAALASYQIGDDAEAIKQMRLLLVKYPELVDMKAALAVIYWKQGDFAKAETAWYNVLNEDPRYRRLEWVRAVRRWPPRMVEELDAFLNFK 341 P LS L A ++ Q+ A + W +D P++AAA+SNRGN R +G + + +D N+AI L PNE DP + RG+AEE LG + A DY ++ NK AL N AN E +WE A + +AA PG+ +S ALA +Q+G+ E+ K+++ L+ +YP D +AAL + W G++ KAE+ W V DPRY +W++ +RRWPP+ +++L F++ K Sbjct: 25 PCYSLSLREDLFKNAIDLSSGGQFNLALQEWNHYLDSYPDDAAALSNRGNVRLVIGDVEGSIDDQNKAIGLNPNEIDPYINRGIAEEALGLWSQAKKDYMFVISQDNKNFSAL---------YNLANVEGSASQWEKARDLFSKAATYNPGFAMARSSMALADFQLGNIDESEKELKKLIRRYPTFADARAALTALNWYNGEYGKAESNWIAVTELDPRYSDEKWLKTIRRWPPKPIKDLMNFIDLK 262
BLAST of NO05G01410 vs. NCBI_GenBank
Match: WP_032517948.1 (tetratricopeptide repeat protein [Prochlorococcus marinus] >KGG03189.1 TPR repeat precursor [Prochlorococcus marinus str. MIT 9321] >KGG06505.1 TPR repeat precursor [Prochlorococcus marinus str. MIT 9322] >KGG09256.1 TPR repeat precursor [Prochlorococcus marinus str. MIT 9401]) HSP 1 Score: 161.0 bits (406), Expect = 7.400e-36 Identity = 89/243 (36.63%), Postives = 136/243 (55.97%), Query Frame = 0 Query: 98 PKIDLSTISKLQDQAFSATNRFQWKEAERAWTRVIDVDPENAAAISNRGNTRTSMGLCKEAKEDFNRAIELAPNEPDPNLGRGVAEECLGEFEAALGDYAEANKKNIALTGREDPVTYNNRANAEAGLGRWEDAVRDYKRAAKMQPGYVFPLASAALASYQIGDDAEAIKQMRLLLVKYPELVDMKAALAVIYWKQGDFAKAETAWYNVLNEDPRYRRLEWVRAVRRWPPRMVEELDAFLNFK 341 P LS L A ++R ++ A + W R + P++AAA+SNRGN R MG + + +D N+AI L P+E DP + +G+AEE LG + A DY IA Y N AN E + +WE A + +A+ PG+ +S ALA +Q+G+ E+ ++++ L+ +YP D +AAL +YW +G+ KAE+ W V DPRY EW++ VRRWPP+ ++L F++ K Sbjct: 25 PCYSLSLRENLFQNALDLSSRGKFNIALQEWNRYLASYPDDAAALSNRGNVRLVMGDVEGSIDDQNKAINLNPSEIDPYINKGIAEEALGLWLEAKKDYMFV----IAQDSTNFSALY-NLANVEGSISQWEKARDLFSKASLYNPGFAMARSSMALADFQLGNLYESEEELKKLIRRYPTFADARAALTALYWSKGESGKAESNWIAVTELDPRYSDEEWLKKVRRWPPKPTKDLMNFIDLK 262
BLAST of NO05G01410 vs. NCBI_GenBank
Match: WP_032522771.1 (tetratricopeptide repeat protein [Prochlorococcus marinus] >KGF95042.1 TPR repeat precursor [Prochlorococcus marinus str. MIT 9201]) HSP 1 Score: 156.8 bits (395), Expect = 1.400e-34 Identity = 80/218 (36.70%), Postives = 127/218 (58.26%), Query Frame = 0 Query: 124 AERAWTRVIDVDPENAAAISNRGNTRTSMGLCKEAKEDFNRAIELAPNEPDPNLGRGVAEECLGEFEAALGDYAEANKKNIALTGREDPVTYNNRANAEAGLGRWEDAVRDYKRAAKMQPGYVFPLASAALASYQIGDDAEAIKQMRLLLVKYPELVDMKAALAVIYWKQGDFAKAETAWYNVLNEDPRYRRLEWVRAVRRWPPRMVEELDAFLNFKL 342 A + W +D P++AA +SNRGN + MG + + +D N+AI L P+E DP + RG+AEE LG + A DY ++ E+ N AN E + +W+ A + +AA PG+ +S ALA +Q+G+ E+ K+++ L+ +YP D +AAL + W +G+F KAE+ W V DPRY EW++ +RRWPP +++L F++ K+ Sbjct: 51 ALQEWNYYLDSYPDDAAGLSNRGNVKLVMGDVEGSIDDQNKAISLNPSEIDPYINRGIAEEALGLWSQAKKDYMFVISQD-----SENFSALYNLANVEGSISQWQKARDLFSKAALYNPGFAMARSSMALADFQLGNVDESEKELKKLIRRYPTFADARAALTALNWSRGEFGKAESNWIAVTELDPRYSDEEWLKNIRRWPPNPIKDLMNFIDLKI 263
BLAST of NO05G01410 vs. NCBI_GenBank
Match: WP_042851146.1 (tetratricopeptide repeat protein [Prochlorococcus sp. MIT 0604] >AIQ95979.1 TPR repeat precursor [Prochlorococcus sp. MIT 0604]) HSP 1 Score: 156.4 bits (394), Expect = 1.800e-34 Identity = 81/216 (37.50%), Postives = 124/216 (57.41%), Query Frame = 0 Query: 128 WTRVIDVDPENAAAISNRGNTRTSMGLCKEAKEDFNRAIELAPNEPDPNLGRGVAEECLGEFEAALGDY---AEANKKNIALTGREDPVTYNNRANAEAGLGRWEDAVRDYKRAAKMQPGYVFPLASAALASYQIGDDAEAIKQMRLLLVKYPELVDMKAALAVIYWKQGDFAKAETAWYNVLNEDPRYRRLEWVRAVRRWPPRMVEELDAFLNFK 341 W + +D P++AA +SNRGN R +G + + +D N+AI L P+E DP + RG+AEE LG + A DY + KN + N AN E WE A + +AA PG+ +S ALA +Q+G+ E+ K+++ L+ +YP D +AAL + W +G+F KAE+ W V DPRY EW++ +RRWPP+ +++L F++ K Sbjct: 55 WNKYLDYYPDDAAGLSNRGNVRLVIGDIEGSIDDQNKAIRLNPSEIDPYINRGIAEEALGLWSQAKKDYMFVISQDSKNFS--------ALYNLANVEGSTLHWEKARDLFSKAALYNPGFAMARSSMALADFQLGNIDESEKELKNLIRRYPTFADARAALTALNWSKGEFGKAESNWIAVTELDPRYSDEEWLKKIRRWPPQPIKDLMKFIDLK 262 The following BLAST results are available for this feature:
BLAST of NO05G01410 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G01410 ID=NO05G01410|Name=NO05G01410|organism=Nannochloropsis oceanica|type=gene|length=1905bpback to top protein sequence of NO05G01410.1 >NO05G01410.1-protein ID=NO05G01410.1-protein|Name=NO05G01410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=387bpback to top Synonyms
Publications
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