NO05G01260, NO05G01260 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G01260 vs. NCBI_GenBank
Match: EWM28191.1 (gtp cyclohydrolase i [Nannochloropsis gaditana]) HSP 1 Score: 361.7 bits (927), Expect = 3.000e-96 Identity = 190/225 (84.44%), Postives = 203/225 (90.22%), Query Frame = 0
Query: 176 GTIPRGAEIRSTASDQRKGEKKEEDAFGQGPEGERLRRMSAAVRTLLECVGEDPDREGLRSTPMRMAKALLYCTKGYEQTVQGVVGGAVFEEDHSEMVVVKDINVFSMCEHHMVPFMGKVHIGYIPRSKVLGLSKLARIAEMYARRLQIQERLTKQIAQAINEAIQPLGVAVVIEATHMCMVMRGVEKPGSVTITSSVTGAFKSNAATRNEFFSLIKSGSSGFGR 401
G++ G E + TA + + ++ G E ERLRRMSAAVRTLLECVGEDPDREGLR+TPMRMAKALLYCTKGY+QTV GVVGGAVFEEDHSEMVVVKDINVFSMCEHHMVPF+GKVHIGYIPRSKVLGLSKLARIAEMYARRLQIQERLTKQIAQAINEAIQPLGVAVVIEATHMCMVMRGVEKPGS TITSSVTGAFKSNAATR+EFFSLIKSG+ G+GR
Sbjct: 123 GSVVHG-ENKLTAHGKHAQRAEGDEDSGGSXEEERLRRMSAAVRTLLECVGEDPDREGLRATPMRMAKALLYCTKGYDQTVAGVVGGAVFEEDHSEMVVVKDINVFSMCEHHMVPFLGKVHIGYIPRSKVLGLSKLARIAEMYARRLQIQERLTKQIAQAINEAIQPLGVAVVIEATHMCMVMRGVEKPGSATITSSVTGAFKSNAATRSEFFSLIKSGNGGYGR 346
BLAST of NO05G01260 vs. NCBI_GenBank
Match: XP_002902995.1 (GTP cyclohydrolase I [Phytophthora infestans T30-4] >EEY56165.1 GTP cyclohydrolase I [Phytophthora infestans T30-4]) HSP 1 Score: 266.9 bits (681), Expect = 9.900e-68 Identity = 133/183 (72.68%), Postives = 156/183 (85.25%), Query Frame = 0
Query: 209 ERLRRMSAAVRTLLECVGEDPDREGLRSTPMRMAKALLYCTKGYEQTVQGVVGGAVFEEDHSEMVVVKDINVFSMCEHHMVPFMGKVHIGYIPRSKVLGLSKLARIAEMYARRLQIQERLTKQIAQAINEAIQPLGVAVVIEATHMCMVMRGVEKPGSVTITSSVTGAFKSNAATRNEFFSLI 392
E+L +M+AAV TLLEC+GEDP REGL TPMRMAKALLY TKGY Q++ V+ AVFEEDH EMV+V+DI+++SMCEHHMVPF GKVHIGYIP KVLGLSKLAR++E+++RRLQ+QERLTKQIA AI I+P GVAVVIEATHMCMVMRGVEK G+ T+TSSV G FKS+ TR+EF SLI
Sbjct: 61 EKLEKMAAAVTTLLECIGEDPQREGLVKTPMRMAKALLYNTKGYGQSLSDVLNEAVFEEDHDEMVIVRDIDLYSMCEHHMVPFTGKVHIGYIPNGKVLGLSKLARVSEVFSRRLQVQERLTKQIANAIMGVIEPKGVAVVIEATHMCMVMRGVEKSGASTVTSSVLGVFKSDPRTRSEFMSLI 243
BLAST of NO05G01260 vs. NCBI_GenBank
Match: POM67426.1 (GTP cyclohydrolase I [Phytophthora palmivora var. palmivora]) HSP 1 Score: 266.9 bits (681), Expect = 9.900e-68 Identity = 133/185 (71.89%), Postives = 157/185 (84.86%), Query Frame = 0
Query: 209 ERLRRMSAAVRTLLECVGEDPDREGLRSTPMRMAKALLYCTKGYEQTVQGVVGGAVFEEDHSEMVVVKDINVFSMCEHHMVPFMGKVHIGYIPRSKVLGLSKLARIAEMYARRLQIQERLTKQIAQAINEAIQPLGVAVVIEATHMCMVMRGVEKPGSVTITSSVTGAFKSNAATRNEFFSLIKS 394
E+L +M+AAV TLLEC+GEDP REGL TPMRMAKA+LY TKGY Q++ V+ AVFEEDH EMV+V+DI+++SMCEHHMVPF GKVHIGYIP KVLGLSKLAR++E+++RRLQ+QERLTKQIA AI I+P GVAVVIEATHMCMVMRGVEK G+ T+TSSV G FKS+ TR+EF SLI S
Sbjct: 65 EKLEKMAAAVTTLLECIGEDPQREGLVKTPMRMAKAMLYNTKGYGQSLADVLNEAVFEEDHDEMVIVRDIDLYSMCEHHMVPFTGKVHIGYIPNGKVLGLSKLARVSEVFSRRLQVQERLTKQIANAIMGVIEPKGVAVVIEATHMCMVMRGVEKSGASTVTSSVLGVFKSDPRTRSEFMSLIHS 249
BLAST of NO05G01260 vs. NCBI_GenBank
Match: XP_008898332.1 (GTP cyclohydrolase I [Phytophthora parasitica INRA-310] >ETI31598.1 GTP cyclohydrolase I [Phytophthora parasitica P1569] >ETK71975.1 GTP cyclohydrolase I [Phytophthora parasitica] >ETL25402.1 GTP cyclohydrolase I [Phytophthora parasitica] >ETL78629.1 GTP cyclohydrolase I [Phytophthora parasitica] >ETM31890.1 GTP cyclohydrolase I [Phytophthora parasitica] >ETN15934.1 GTP cyclohydrolase I [Phytophthora parasitica INRA-310] >ETO60316.1 GTP cyclohydrolase I [Phytophthora parasitica P1976] >ETP01412.1 GTP cyclohydrolase I [Phytophthora parasitica CJ01A1] >ETP29583.1 GTP cyclohydrolase I [Phytophthora parasitica P10297] >KUF96979.1 hypothetical protein AM588_10006621 [Phytophthora nicotianae] >KUG01392.1 GTP cyclohydrolase 1 [Phytophthora nicotianae]) HSP 1 Score: 266.5 bits (680), Expect = 1.300e-67 Identity = 133/183 (72.68%), Postives = 156/183 (85.25%), Query Frame = 0
Query: 209 ERLRRMSAAVRTLLECVGEDPDREGLRSTPMRMAKALLYCTKGYEQTVQGVVGGAVFEEDHSEMVVVKDINVFSMCEHHMVPFMGKVHIGYIPRSKVLGLSKLARIAEMYARRLQIQERLTKQIAQAINEAIQPLGVAVVIEATHMCMVMRGVEKPGSVTITSSVTGAFKSNAATRNEFFSLI 392
E+L +M+AAV TLLEC+GEDP REGL TPMRMAKALLY TKGY Q++ V+ AVFEEDH EMV+V+DI+++SMCEHHMVPF GKVHIGYIP KVLGLSKLAR++E+++RRLQ+QERLTKQIA AI I+P GVAVVIEATHMCMVMRGVEK G+ T+TSSV G FKS+ TR+EF SLI
Sbjct: 61 EKLEKMAAAVTTLLECIGEDPQREGLVKTPMRMAKALLYNTKGYGQSLTDVLNEAVFEEDHDEMVIVRDIDLYSMCEHHMVPFTGKVHIGYIPNGKVLGLSKLARVSEVFSRRLQVQERLTKQIANAIMGVIEPKGVAVVIEATHMCMVMRGVEKSGASTVTSSVLGVFKSDPRTRSEFMSLI 243
BLAST of NO05G01260 vs. NCBI_GenBank
Match: XP_009533421.1 (hypothetical protein PHYSODRAFT_355289 [Phytophthora sojae] >EGZ10676.1 hypothetical protein PHYSODRAFT_355289 [Phytophthora sojae]) HSP 1 Score: 266.2 bits (679), Expect = 1.700e-67 Identity = 133/185 (71.89%), Postives = 157/185 (84.86%), Query Frame = 0
Query: 209 ERLRRMSAAVRTLLECVGEDPDREGLRSTPMRMAKALLYCTKGYEQTVQGVVGGAVFEEDHSEMVVVKDINVFSMCEHHMVPFMGKVHIGYIPRSKVLGLSKLARIAEMYARRLQIQERLTKQIAQAINEAIQPLGVAVVIEATHMCMVMRGVEKPGSVTITSSVTGAFKSNAATRNEFFSLIKS 394
++L +M+AAV TLLEC+GEDP REGL TPMRMAKALLY TKGY Q++ V+ AVFEEDH EMV+V+DI+++SMCEHHMVPF GKVHIGYIP KVLGLSKLAR++E+++RRLQ+QERLTKQIA AI I+P GVAVVIEATHMCMVMRGVEK G+ T+TSSV G FKS+ TR+EF SLI S
Sbjct: 82 QKLDKMAAAVTTLLECIGEDPQREGLLKTPMRMAKALLYNTKGYGQSLADVLNEAVFEEDHDEMVIVRDIDLYSMCEHHMVPFAGKVHIGYIPNGKVLGLSKLARVSEVFSRRLQVQERLTKQIANAIMGVIEPKGVAVVIEATHMCMVMRGVEKSGASTVTSSVLGVFKSDPRTRSEFMSLIHS 266
BLAST of NO05G01260 vs. NCBI_GenBank
Match: XP_024584589.1 (gtp cyclohydrolase i [Plasmopara halstedii] >CEG48220.1 gtp cyclohydrolase i [Plasmopara halstedii]) HSP 1 Score: 265.8 bits (678), Expect = 2.200e-67 Identity = 132/182 (72.53%), Postives = 156/182 (85.71%), Query Frame = 0
Query: 210 RLRRMSAAVRTLLECVGEDPDREGLRSTPMRMAKALLYCTKGYEQTVQGVVGGAVFEEDHSEMVVVKDINVFSMCEHHMVPFMGKVHIGYIPRSKVLGLSKLARIAEMYARRLQIQERLTKQIAQAINEAIQPLGVAVVIEATHMCMVMRGVEKPGSVTITSSVTGAFKSNAATRNEFFSLI 392
+L +M+AAV TLLEC+GEDP REGL TPMRMAKALLY TKGY Q++ V+ AVFEEDH EMV+V+DI+++SMCEHHMVPF GKVHIGYIP KVLGLSKLAR++E+++RRLQ+QERLTKQIA AI I+P GVAVVIEATHMCMVMRGVEK G+ T+TSSV G FKS++ TR+EF SLI
Sbjct: 62 KLEKMAAAVTTLLECIGEDPHREGLVKTPMRMAKALLYNTKGYSQSLADVLNEAVFEEDHDEMVIVRDIDLYSMCEHHMVPFTGKVHIGYIPNGKVLGLSKLARVSEVFSRRLQVQERLTKQIATAIMGVIEPKGVAVVIEATHMCMVMRGVEKSGASTVTSSVLGVFKSDSRTRSEFMSLI 243
BLAST of NO05G01260 vs. NCBI_GenBank
Match: OWZ24495.1 (GTP cyclohydrolase I [Phytophthora megakarya]) HSP 1 Score: 265.4 bits (677), Expect = 2.900e-67 Identity = 132/183 (72.13%), Postives = 156/183 (85.25%), Query Frame = 0
Query: 209 ERLRRMSAAVRTLLECVGEDPDREGLRSTPMRMAKALLYCTKGYEQTVQGVVGGAVFEEDHSEMVVVKDINVFSMCEHHMVPFMGKVHIGYIPRSKVLGLSKLARIAEMYARRLQIQERLTKQIAQAINEAIQPLGVAVVIEATHMCMVMRGVEKPGSVTITSSVTGAFKSNAATRNEFFSLI 392
E+L +M+AAV TLLEC+GEDP REGL TPMRMAKA+LY TKGY Q++ V+ AVFEEDH EMV+V+DI+++SMCEHHMVPF GKVHIGYIP KVLGLSKLAR++E+++RRLQ+QERLTKQIA AI I+P GVAVVIEATHMCMVMRGVEK G+ T+TSSV G FKS+ TR+EF SLI
Sbjct: 67 EKLEKMAAAVTTLLECIGEDPKREGLVKTPMRMAKAMLYNTKGYGQSLADVLNEAVFEEDHDEMVIVRDIDLYSMCEHHMVPFTGKVHIGYIPNGKVLGLSKLARVSEVFSRRLQVQERLTKQIANAIMGVIEPKGVAVVIEATHMCMVMRGVEKSGASTVTSSVLGVFKSDPRTRSEFMSLI 249
BLAST of NO05G01260 vs. NCBI_GenBank
Match: XP_020430444.1 (GTP cyclohydrolase I [Heterostelium album PN500] >EFA78319.1 GTP cyclohydrolase I [Heterostelium album PN500]) HSP 1 Score: 264.6 bits (675), Expect = 4.900e-67 Identity = 128/183 (69.95%), Postives = 158/183 (86.34%), Query Frame = 0
Query: 211 LRRMSAAVRTLLECVGEDPDREGLRSTPMRMAKALLYCTKGYEQTVQGVVGGAVFEEDHSEMVVVKDINVFSMCEHHMVPFMGKVHIGYIPRSKVLGLSKLARIAEMYARRLQIQERLTKQIAQAINEAIQPLGVAVVIEATHMCMVMRGVEKPGSVTITSSVTGAFKSNAATRNEFFSLIKS 394
L M V++LLE +GEDP+REGL+ TP+RMAKAL+Y T GYE +V ++GGA+F E+H EMVVV+DI++FS+CEHHMVPF GK HIGYIP KVLGLSKLARIAE++ARRLQ+QERLT+QIA AINEA+ P+GVAVVIEA+HMCMVMRGV+KPGS T+TSSV G F+ ++ TR+EFFSLI+S
Sbjct: 50 LALMQGNVKSLLESIGEDPEREGLQKTPLRMAKALMYFTHGYELSVDEIIGGAIFNENHHEMVVVRDIDIFSLCEHHMVPFYGKCHIGYIPDRKVLGLSKLARIAEIFARRLQVQERLTRQIALAINEALNPMGVAVVIEASHMCMVMRGVQKPGSSTVTSSVCGVFEQDSRTRSEFFSLIRS 232
BLAST of NO05G01260 vs. NCBI_GenBank
Match: XP_004361904.1 (GTP cyclohydrolase I [Cavenderia fasciculata] >EGG24053.1 GTP cyclohydrolase I [Cavenderia fasciculata]) HSP 1 Score: 262.3 bits (669), Expect = 2.400e-66 Identity = 128/184 (69.57%), Postives = 158/184 (85.87%), Query Frame = 0
Query: 210 RLRRMSAAVRTLLECVGEDPDREGLRSTPMRMAKALLYCTKGYEQTVQGVVGGAVFEEDHSEMVVVKDINVFSMCEHHMVPFMGKVHIGYIPRSKVLGLSKLARIAEMYARRLQIQERLTKQIAQAINEAIQPLGVAVVIEATHMCMVMRGVEKPGSVTITSSVTGAFKSNAATRNEFFSLIKS 394
RL+ MS V+ LL +GE+P+REGL TPMRM+KAL++ T GYE TV ++GGA+F+EDH EMVVV+DI++FS+CEHHMVPF GK HIGYIP KVLGLSKLARIAE++ARRLQ+QERLT+QIA AI EA+ P+GVAVVIEA+HMCMVMRGV+KPGS T+TSSV G F+ ++ TR+EFFSLI+S
Sbjct: 101 RLQGMSDNVKQLLIGIGENPEREGLLDTPMRMSKALMFFTHGYELTVDEIIGGAIFDEDHHEMVVVRDIDIFSLCEHHMVPFFGKCHIGYIPNKKVLGLSKLARIAEIFARRLQVQERLTRQIAMAIQEALSPMGVAVVIEASHMCMVMRGVQKPGSSTVTSSVCGIFEHDSRTRSEFFSLIRS 284
BLAST of NO05G01260 vs. NCBI_GenBank
Match: NP_593481.1 (putative GTP cyclohydrolase [Schizosaccharomyces pombe] >O13774.1 RecName: Full=GTP cyclohydrolase 1; AltName: Full=GTP cyclohydrolase I; Short=GTP-CH-I >CAB11513.1 GTP cyclohydrolase (predicted) [Schizosaccharomyces pombe]) HSP 1 Score: 262.3 bits (669), Expect = 2.400e-66 Identity = 125/185 (67.57%), Postives = 158/185 (85.41%), Query Frame = 0
Query: 207 EGERLRRMSAAVRTLLECVGEDPDREGLRSTPMRMAKALLYCTKGYEQTVQGVVGGAVFEEDHSEMVVVKDINVFSMCEHHMVPFMGKVHIGYIPRSKVLGLSKLARIAEMYARRLQIQERLTKQIAQAINEAIQPLGVAVVIEATHMCMVMRGVEKPGSVTITSSVTGAFKSNAATRNEFFSLI 392
E E+++++S A+ T+LEC+GEDP+R+GL TP R AKA+LY TKGYEQ + V+ AVF+EDH EMV+V+DI+VFS+CEHH+VPF+GK+HIGYIPR +VLGLSKLARIA M++RRLQ+QERLTKQ+AQAI ++P GVAVV+EATHMCMVMRGVEKPGS T+TSS+TG F+ + TR EFF LI
Sbjct: 48 EEEKVKKISNAISTILECLGEDPERQGLLGTPERYAKAMLYFTKGYEQNLTEVINEAVFQEDHEEMVIVRDIDVFSLCEHHLVPFIGKIHIGYIPRKRVLGLSKLARIANMFSRRLQVQERLTKQVAQAIQAVLKPQGVAVVMEATHMCMVMRGVEKPGSSTVTSSLTGIFQRSHKTREEFFRLI 232 The following BLAST results are available for this feature:
BLAST of NO05G01260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G01260 ID=NO05G01260|Name=NO05G01260|organism=Nannochloropsis oceanica|type=gene|length=2576bpback to top protein sequence of NO05G01260.1 >NO05G01260.1-protein ID=NO05G01260.1-protein|Name=NO05G01260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=401bpback to top Synonyms
Publications
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