NO05G00930, NO05G00930 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G00930 vs. NCBI_GenBank
Match: XP_005853693.1 (U4/U6 small nuclear ribonucleoprotein SNU13 [Nannochloropsis gaditana CCMP526] >EKU22664.1 U4/U6 small nuclear ribonucleoprotein SNU13 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 245.7 bits (626), Expect = 7.700e-62 Identity = 127/129 (98.45%), Postives = 128/129 (99.22%), Query Frame = 0 Query: 1 MSEGGEISKKAFPLASADLTVSILDLIQQANNYKQLKKGANEATKALNRGIAELIIMAADAEPLEILLHLPLLCEDKNVPYVFVPAKIALGRACGVTRPVISCAILSNEASQLKDQINSLKDRIEALLI 130 MS GGEISKKAFPLASADLTVSILDL+QQANNYKQLKKGANEATKALNRGIAELIIMAADAEPLEILLHLPLLCEDKNVPYVFVPAKIALGRACGVTRPVISCAILSNEASQLKDQINSLKDRIEALLI Sbjct: 1 MSNGGEISKKAFPLASADLTVSILDLVQQANNYKQLKKGANEATKALNRGIAELIIMAADAEPLEILLHLPLLCEDKNVPYVFVPAKIALGRACGVTRPVISCAILSNEASQLKDQINSLKDRIEALLI 129
BLAST of NO05G00930 vs. NCBI_GenBank
Match: CBJ48802.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 199.9 bits (507), Expect = 4.800e-48 Identity = 99/129 (76.74%), Postives = 117/129 (90.70%), Query Frame = 0 Query: 1 MSEGGEISKKAFPLASADLTVSILDLIQQANNYKQLKKGANEATKALNRGIAELIIMAADAEPLEILLHLPLLCEDKNVPYVFVPAKIALGRACGVTRPVISCAILSNEASQLKDQINSLKDRIEALLI 130 M+E G ++ KA+PL DLTV+ILDLIQQA+NYKQLKKGANEATK LNRGI+E I+MAADAEPLEILLHLPLLCEDKNVPYVFVP+K+ALGRACGV+RPV++C++ +NEASQLK QI +LKD+IE LLI Sbjct: 1 MAEDG-VNPKAYPLTGPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVVACSVTTNEASQLKSQIITLKDQIEQLLI 128
BLAST of NO05G00930 vs. NCBI_GenBank
Match: XP_009036290.1 (hypothetical protein AURANDRAFT_53454 [Aureococcus anophagefferens] >EGB09179.1 hypothetical protein AURANDRAFT_53454 [Aureococcus anophagefferens]) HSP 1 Score: 199.9 bits (507), Expect = 4.800e-48 Identity = 98/124 (79.03%), Postives = 116/124 (93.55%), Query Frame = 0 Query: 6 EISKKAFPLASADLTVSILDLIQQANNYKQLKKGANEATKALNRGIAELIIMAADAEPLEILLHLPLLCEDKNVPYVFVPAKIALGRACGVTRPVISCAILSNEASQLKDQINSLKDRIEALLI 130 E++ KA+PLA A+L+V+ILDL+QQA NYKQLKKGANEATK+LNRGIAE I++AADAEPLEILLHLPLLCEDKNVPYVFV +K+ALGRACGV+RPVISC++ SNEASQLKDQI ++KD+IE LLI Sbjct: 3 EVNPKAYPLADANLSVTILDLVQQACNYKQLKKGANEATKSLNRGIAEFIVLAADAEPLEILLHLPLLCEDKNVPYVFVASKLALGRACGVSRPVISCSVTSNEASQLKDQILTMKDKIEQLLI 126
BLAST of NO05G00930 vs. NCBI_GenBank
Match: XP_005787147.1 (hypothetical protein EMIHUDRAFT_460589 [Emiliania huxleyi CCMP1516] >EOD34718.1 hypothetical protein EMIHUDRAFT_460589 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 198.0 bits (502), Expect = 1.800e-47 Identity = 100/125 (80.00%), Postives = 112/125 (89.60%), Query Frame = 0 Query: 5 GEISKKAFPLASADLTVSILDLIQQANNYKQLKKGANEATKALNRGIAELIIMAADAEPLEILLHLPLLCEDKNVPYVFVPAKIALGRACGVTRPVISCAILSNEASQLKDQINSLKDRIEALLI 130 GE + KAFPLA ++LTVSILD++QQA N+KQLKKGANEATK LNRGIAELI+MAADAEPLEILLHLPLLCEDKNVPYVFVP K ALGR+CGV+RPVISC+I +NE SQLK+QI LKD IE LLI Sbjct: 3 GEPNPKAFPLADSNLTVSILDVVQQAANFKQLKKGANEATKTLNRGIAELIVMAADAEPLEILLHLPLLCEDKNVPYVFVPNKQALGRSCGVSRPVISCSITTNEGSQLKNQIQQLKDSIEKLLI 127
BLAST of NO05G00930 vs. NCBI_GenBank
Match: PKA65428.1 (H/ACA ribonucleoprotein complex subunit 2-like protein [Apostasia shenzhenica]) HSP 1 Score: 197.2 bits (500), Expect = 3.100e-47 Identity = 97/129 (75.19%), Postives = 112/129 (86.82%), Query Frame = 0 Query: 1 MSEGGEISKKAFPLASADLTVSILDLIQQANNYKQLKKGANEATKALNRGIAELIIMAADAEPLEILLHLPLLCEDKNVPYVFVPAKIALGRACGVTRPVISCAILSNEASQLKDQINSLKDRIEALLI 130 M++G +++ KA+PLA A LT++ILDLIQQA NYKQLKKGANEATK LNRGI+E ++MAAD EPLEILLHLPLL EDKNVPYVFVP+K ALGRACGVTRPVI+C++ SNE SQLK QI LKD IE LLI Sbjct: 1 MTKGEQVNPKAYPLADAQLTITILDLIQQAANYKQLKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKSQIQQLKDAIEKLLI 129
BLAST of NO05G00930 vs. NCBI_GenBank
Match: KFK22907.1 (hypothetical protein AALP_AAs68017U000400 [Arabis alpina]) HSP 1 Score: 196.4 bits (498), Expect = 5.300e-47 Identity = 96/123 (78.05%), Postives = 110/123 (89.43%), Query Frame = 0 Query: 7 ISKKAFPLASADLTVSILDLIQQANNYKQLKKGANEATKALNRGIAELIIMAADAEPLEILLHLPLLCEDKNVPYVFVPAKIALGRACGVTRPVISCAILSNEASQLKDQINSLKDRIEALLI 130 ++ KA+PLA A L ++ILDL+QQA NYKQLKKGANEATK LNRGI+E ++MAADA+PLEILLHLPLL EDKNVPYVFVP+K ALGRACGVTRPVI+C++LSNEASQLK QIN LKD IE LLI Sbjct: 6 VNPKAYPLADAQLAITILDLVQQATNYKQLKKGANEATKTLNRGISEFVVMAADADPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVLSNEASQLKSQINQLKDAIEKLLI 128
BLAST of NO05G00930 vs. NCBI_GenBank
Match: XP_010420854.1 (PREDICTED: NHP2-like protein 1 [Camelina sativa] >XP_010454319.1 PREDICTED: NHP2-like protein 1 [Camelina sativa] >XP_010493123.1 PREDICTED: NHP2-like protein 1 [Camelina sativa]) HSP 1 Score: 196.1 bits (497), Expect = 7.000e-47 Identity = 97/126 (76.98%), Postives = 111/126 (88.10%), Query Frame = 0 Query: 4 GGEISKKAFPLASADLTVSILDLIQQANNYKQLKKGANEATKALNRGIAELIIMAADAEPLEILLHLPLLCEDKNVPYVFVPAKIALGRACGVTRPVISCAILSNEASQLKDQINSLKDRIEALLI 130 G ++ KA+PLA A L+++ILDL+QQA NYKQLKKGANEATK LNRGI+E ++MAADAEPLEILLHLPLL EDKNVPYVFVP+K ALGRACGVTRPVI+C++ SNEASQLK QI SLKD IE LLI Sbjct: 3 GEAVNPKAYPLADAQLSITILDLVQQATNYKQLKKGANEATKTLNRGISEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKAQIQSLKDAIEKLLI 128
BLAST of NO05G00930 vs. NCBI_GenBank
Match: PPR88725.1 (hypothetical protein GOBAR_AA31966 [Gossypium barbadense]) HSP 1 Score: 194.9 bits (494), Expect = 1.600e-46 Identity = 97/129 (75.19%), Postives = 109/129 (84.50%), Query Frame = 0 Query: 1 MSEGGEISKKAFPLASADLTVSILDLIQQANNYKQLKKGANEATKALNRGIAELIIMAADAEPLEILLHLPLLCEDKNVPYVFVPAKIALGRACGVTRPVISCAILSNEASQLKDQINSLKDRIEALLI 130 MS G ++ KA+PLA A LT +ILDL+QQA NYKQLKKGANEATK LNRGI+E ++MAAD EPLEILLHLPLL EDKNVPYVFVP+K ALGRACGVTRPVI+C++ SNE SQLK QI LKD IE LLI Sbjct: 1 MSTGEPVNPKAYPLADAQLTTTILDLVQQAANYKQLKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKSQIQQLKDAIEKLLI 129
BLAST of NO05G00930 vs. NCBI_GenBank
Match: KFK26260.1 (hypothetical protein AALP_AA8G223900 [Arabis alpina]) HSP 1 Score: 194.5 bits (493), Expect = 2.000e-46 Identity = 97/126 (76.98%), Postives = 110/126 (87.30%), Query Frame = 0 Query: 4 GGEISKKAFPLASADLTVSILDLIQQANNYKQLKKGANEATKALNRGIAELIIMAADAEPLEILLHLPLLCEDKNVPYVFVPAKIALGRACGVTRPVISCAILSNEASQLKDQINSLKDRIEALLI 130 G ++ KA+PLA A L ++ILDL+QQA NYKQLKKGANEATK LNRGI+E ++MAADAEPLEILLHLPLL EDKNVPYVFVP+K ALGRACGVTR VI+C++LSNEASQLK QIN LKD IE LLI Sbjct: 3 GEAVNPKAYPLADAQLAITILDLVQQACNYKQLKKGANEATKTLNRGISEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRSVIACSVLSNEASQLKTQINQLKDAIEKLLI 128
BLAST of NO05G00930 vs. NCBI_GenBank
Match: XP_010541721.1 (PREDICTED: NHP2-like protein 1 [Tarenaya hassleriana]) HSP 1 Score: 194.5 bits (493), Expect = 2.000e-46 Identity = 96/123 (78.05%), Postives = 109/123 (88.62%), Query Frame = 0 Query: 7 ISKKAFPLASADLTVSILDLIQQANNYKQLKKGANEATKALNRGIAELIIMAADAEPLEILLHLPLLCEDKNVPYVFVPAKIALGRACGVTRPVISCAILSNEASQLKDQINSLKDRIEALLI 130 ++ KA+PLA A LT++ILDL+QQA NYKQLKKGANEATK LNRGI+E ++MAADAEPLEILLHLPLL EDKNVPYVFVP+K ALGRACGVTRPVI+C++ SNEASQLK QI LKD IE LLI Sbjct: 6 VNPKAYPLADAQLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKSQIQQLKDAIEKLLI 128 The following BLAST results are available for this feature:
BLAST of NO05G00930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G00930 ID=NO05G00930|Name=NO05G00930|organism=Nannochloropsis oceanica|type=gene|length=1454bpback to top protein sequence of NO05G00930.1 >NO05G00930.1-protein ID=NO05G00930.1-protein|Name=NO05G00930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=130bpback to top Synonyms
Publications
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