NO05G00510, NO05G00510 (gene) Nannochloropsis oceanica

Overview
NameNO05G00510
Unique NameNO05G00510
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3029
Alignment locationchr5:181388..184416 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:181388..184416 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO05G00510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL087nonsL087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR119ngnoR119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G00510.1NO05G00510.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|388379gene_2844Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100109g18gene2242Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G00510.1NO05G00510.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G00510 ID=NO05G00510|Name=NO05G00510|organism=Nannochloropsis oceanica|type=gene|length=3029bp
ACAGGCAATGCCGCAGGGGCCGGAGGAAAATTGGAAAGTCTTGTCTTGGC
CGCTAGCGCCTGTCGGTTCTCCGGTGCCTTCCTGTGCCCTCTTGTCCGCT
TCCCGACGCAAGATCAACGCTTAAACCCAACACAACGCAGGTCATTTGAC
CTGCTAGAAGGCCACGACACGAACAGAGGGCGGTATCATTATTATCACAG
AGATGCAAGAGGACGCTATCAAGCTGCCCTTGCAATGCGGAGAAGGGCAG
CAACTGCACGCGCATATGCCGGAGTATGGAAATACCCCGCACAGTCAGTC
GGCAGAAGACCTGGCAGGCAATATTAAGGAACTATGCCGAGAAAGTGGGA
GAGGTCATGAAGAAGGAAGGAGAAGAACAACAGAAGGGGTTGCAGGAGAA
GGAGGATCAGCAGTAGGGAGAAAGGGAGGAAGTATGAATGTCGCTGATCC
CCCGCGAGACACGCCCTCGACTTCGGTGATTGCCTCATGCATCCACCGAT
TTCGGACACAACCTCCTATGTCACGGGAGGGACGGCGGCAGCGACAGCAG
CAGCAGCGACAGCGGCAGAATTACCAGGGGGACAATGCCGGTGATGGTGT
CGGGGGAGGGGATCTCGGAACAAGGGAGGAGGATTTTTGGTGGCAACCTC
AGCACCAGCAGCAGCTGCATCAACAACCACTTCAAGAGCAGCAGGAGTGC
TTGCTTCCTATGCAAGTTATAGATAAAGAGGTCGATCTCGATGGTTCTGC
GAAAGTCTCGTTGGACAAGTGCAAGGCTGTTCTCGGCGACCCGCCGCTGT
TACCCCCCTCTTCATTCTTCCCTCCCTCCTTCTTCCCCCTGCCCTTGACA
TCAGCAGGAGATGTCATCGTCCCTTCCAGGCAAGAATTTATTGGTGGTGC
GGGCTACCCTGACGCTGAAGAGCAGCAGCAGCAGCCGCAAGACGTCGATT
ATGAAGAAGGAAGATGGGAACACCCACCACCACCAGCAGCAGCAGCAACA
ACAGCACTAGCAGTAGCAACAGCAGCAGTAGGACTAGCAGCAGCACCATT
AGCATGTAGAGGAGGAGGAAACGATGCCTCTCCAACAGCAAATGGCCCGC
CGGCAGATAGGCTGCCCCTAGCCCAGACAGAGATGGGCTTGCCCACCGAG
GACATGATGGATGAAGGAGAAGTCCCTCCTTCCCTCCCTCCCTCCCTCCT
TCCCTCTCTCCTGCCCACCCCTTATGCTCCCTCCATTCCAGCCGCCACTG
TGACACCTCCTTGCTTGGAGCCGCGGTCCATGGCCACCACGACATCCTGC
TTCTCTCCTTCCTCTACCATGATCCCCTGCTCCTCCCCCCCCTCCAACCG
ACCAGCCGTATTGCGAGGAGTCCAAGGAGGGGAGGGAGGGCAGGAGGGAG
GAAGAGCGATCAACCGACCTTCCTCCCCAGTGCCGCCAGCGTTGTCGATC
TCAATGGCGTGTATCGGGAATATCAAGGAGGAAACATTACCGGTTTTTTA
TAGGCAGCAATTACTGGCCTTTGAAAGGCAGGAGAAGAGGGAGGCGGCGC
TGAGAGAGAAGAGGAAGGTGTCAGCAGTAGCAGCAGCAGCAGCAGCAGCA
GAAGTAGCAGCAGCAGCAGCAGGAGGAGGAGGAGGAGGAGGAGGAGGAGA
AGGAGGAGGAGGAGGAGGATTGGCAAAGGCGGATGGGTGGGGGAGGAACG
CGGTGTCGCACTTGAGGGTGAGAACGACTCTCGATGGCAGCGATGGTACA
TGGCTCTCCCCTCCCTCCATGTATTGCTTCAATGCCCGCCGCTCCAGTCC
ACCTTATAACAACATGCGGCGACGCGCAGCACCCAGCAGCTGCTGCAGCA
GGAGCAGTAGTAAGAACAACAAGAGCAACAGCAGTCTTTCAAGCCCTCCC
ACGGCCTCCTCCTCATCCTCATCTTCCTCCTTTCACCACCTCACCCCCCT
TCTCTATCGCTCAACCCCCTTAAACACCAGAGGATTTCCTGGGAACAGTC
TTTCCTCCCCCATCTACTCCTCTTCCTACTCCTCAGTAGCCTGGCCCCCC
TCCCCGCATTCTCTACAAGTAGTTCAAAATCTCGTCCAACAAATTGTGCA
TCAACACCTCTTTGACCTTCCTCTCATCTATGAAACGTCTCCTTTCGACC
AGCAGCAGCAGCAGCAGTACGAGGGAGGGAGGGAGGGAGGGGGAAAGGAA
GATGTGGAGGAAGAGGTGAGGATGGATGATGGTGGGTTTTACAAGCACCG
GAAGCCATTGTCGACTGATAGCATAGATAGTCTAGGAATGGAGGAGAAAG
AAAGGGAGGAAGAGCTGGCGATGCTGTGGTTGGAGGAGGAAAGGGAGGAG
GACGAGGGGGAGAGAGGAAAGGAACTGGGGGAATATGATAATGATGGGGT
CGTACGGGCGTTGAGGGAGAGGAGGAGAGAGCTGCTCGTTGAGCTGGCCT
TGGCGAATAGAAGAGAGGATGCGGAGAGAGGAGGAAATGGAGGGGGTGAG
GGTGGTCGGGTGTGGTGAGCAGCAGTGTGCGGTACGTGTCTGTCATTGTA
GATTACGAAGAAACGAATAGTGGTTTAGACGTCCAAGTCCTCCCTTCCGT
CCTCCCCTTGGGGAAATGAGTGTTATGAATTAGTTCAGGAGGGTATCGGG
GGGGAGGACGAGGAGGAAGAAGAGGCGCAGGAGCGGTGTGTGGAAAGACA
GGGAGTTCTTTTAATAAGTAGATGGGTGAGAATGATAGCTAGCAAAAGAG
ACAGGATGAGGATGATGATGAGAATGAGAAGAATAGCCAGCCCGATATTC
TCTCTAAACTACACCTACTGATGGTGCGAGGAGGAGAATTAAGATTGATA
GGATGACCATTATAGGAAAGGTTCCAGTATGGCAGCAATAGCACAAAGAT
GATACGAGTCAGAGGAATATGTGAGGTGGTGGAGGGGTAGAGAAAGAAAA
AATGAATGGAACAGACAACATACAGAAGAACAGACAAGAGAAGAAGAAGG
AAAAGAAACAAGCCCCAGACCATCGCAAG
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protein sequence of NO05G00510.1

>NO05G00510.1-protein ID=NO05G00510.1-protein|Name=NO05G00510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=772bp
MQEDAIKLPLQCGEGQQLHAHMPEYGNTPHSQSAEDLAGNIKELCRESGR
GHEEGRRRTTEGVAGEGGSAVGRKGGSMNVADPPRDTPSTSVIASCIHRF
RTQPPMSREGRRQRQQQQRQRQNYQGDNAGDGVGGGDLGTREEDFWWQPQ
HQQQLHQQPLQEQQECLLPMQVIDKEVDLDGSAKVSLDKCKAVLGDPPLL
PPSSFFPPSFFPLPLTSAGDVIVPSRQEFIGGAGYPDAEEQQQQPQDVDY
EEGRWEHPPPPAAAATTALAVATAAVGLAAAPLACRGGGNDASPTANGPP
ADRLPLAQTEMGLPTEDMMDEGEVPPSLPPSLLPSLLPTPYAPSIPAATV
TPPCLEPRSMATTTSCFSPSSTMIPCSSPPSNRPAVLRGVQGGEGGQEGG
RAINRPSSPVPPALSISMACIGNIKEETLPVFYRQQLLAFERQEKREAAL
REKRKVSAVAAAAAAAEVAAAAAGGGGGGGGGEGGGGGGLAKADGWGRNA
VSHLRVRTTLDGSDGTWLSPPSMYCFNARRSSPPYNNMRRRAAPSSCCSR
SSSKNNKSNSSLSSPPTASSSSSSSSFHHLTPLLYRSTPLNTRGFPGNSL
SSPIYSSSYSSVAWPPSPHSLQVVQNLVQQIVHQHLFDLPLIYETSPFDQ
QQQQQYEGGREGGGKEDVEEEVRMDDGGFYKHRKPLSTDSIDSLGMEEKE
REEELAMLWLEEEREEDEGERGKELGEYDNDGVVRALRERRRELLVELAL
ANRREDAERGGNGGGEGGRVW*
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Synonyms
Publications