NO05G00200, NO05G00200 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G00200 vs. NCBI_GenBank
Match: XP_009038696.1 (hypothetical protein AURANDRAFT_71973 [Aureococcus anophagefferens] >EGB06517.1 hypothetical protein AURANDRAFT_71973 [Aureococcus anophagefferens]) HSP 1 Score: 131.3 bits (329), Expect = 8.100e-27 Identity = 104/367 (28.34%), Postives = 141/367 (38.42%), Query Frame = 0 Query: 2 YTPVLTRLWKAGNVTAAKEVWEGMMERGAVPNEEHVVSMVECYASQGPTVFRQHLDDISCLLNLLGNKLVLNVTDAGIETL-LNAFPSGGRGGGKVAAARVRIPGSGVCPHCQGQLRPLRLDQEERKELRERLLVLAEEKQAAWKSAGKLVLSSLASPGSGXXXXXXXXXXXXXXXXXXGPSPSKIISLRALEAWLNARP-PFDVVLDAPNIAYYGQNFGDGRFNFNQIDIVLKALKAQGKRAFLVIPVKYTSRRIRDHVHREEGQGR----GGGRVRALDDEETAMLERWTDEGIVYRIPRGQLDDLYWMYATVAARSDTASSPMIAISNDCMRDHWLDLLEARPFLRWKTTQVQSYRFDYSVEDN 363 Y P++ L A V A+ VW M G P +E V+++E A G D C L DAG+ L + R + G C L LD ER + RERLL +A S L A AWL P F VLD PN+AY QNF G+F Q+ V L+A G +V+P KY + +H R GG ++ L+D E A ++ W + G +Y +PRG DDLYWM ATV + +A+SND RDHW L+ + RW T V ++ Y+ D+ Sbjct: 559 YAPLVAALCAADRVRDARTVWAAMAAGGVAPTDELYVALLEALARSG--------DAAGCAACLRERAA---ADDAGLAAAHLTRVSAALRSLPDATCEATTVDDDGTCRVSGRTLPTGGLDGRERAQFRERLLDVAN-----------------------------------------ATSERDRRELAAFGAWLEDHPYAFTAVLDGPNVAYLNQNFEHGKFRVRQLQAVAGHLEAAGHVVLVVLPAKYCEAVVPNHSKRRPRAAARDEPGGTPLQELEDSELAAIKAWAERGALYVVPRGCHDDLYWMLATV------SRDQPLAVSNDKTRDHWPKLIGEAQYRRWATRSVVNFGLGYAEPDD 867
BLAST of NO05G00200 vs. NCBI_GenBank
Match: XP_005825439.1 (hypothetical protein GUITHDRAFT_115425 [Guillardia theta CCMP2712] >EKX38459.1 hypothetical protein GUITHDRAFT_115425 [Guillardia theta CCMP2712]) HSP 1 Score: 125.6 bits (314), Expect = 4.500e-25 Identity = 64/157 (40.76%), Postives = 93/157 (59.24%), Query Frame = 0 Query: 202 FDVVLDAPNIAYYGQNFGDGRFNFNQIDIVLKALKAQGKRAFLVIPVKYTSRRIRDHVHREEGQGRGGGRVRALDDEETAMLERWTDEGIVYRIPRGQLDDLYWMYATVAARSDTASSPMIAISNDCMRDHWLDLLEARPFLRWKTTQVQSYRFDYS 359 F VV+D PN+AY QNF G F+++QIDIV+ L+ +G++ +++P KY I +H R +G + +E +++RW EG + P G DD YWM +TV +T ++ND MRDH L LL+ RPFLRWKTT++ RFD+S Sbjct: 28 FSVVVDGPNVAYSKQNFETGCFSYHQIDIVVNKLREEGEKVLVLLPYKYVQPIIPNHA-RHQGHLNFSTAQHVVTGDEMEIIDRWNAEGCLKISPHGSNDDWYWMLSTVIDEGETVR----VVTNDQMRDHRLALLDPRPFLRWKTTRI--IRFDFS 177
BLAST of NO05G00200 vs. NCBI_GenBank
Match: EJK63364.1 (hypothetical protein THAOC_15979, partial [Thalassiosira oceanica]) HSP 1 Score: 124.4 bits (311), Expect = 1.000e-24 Identity = 99/316 (31.33%), Postives = 142/316 (44.94%), Query Frame = 0 Query: 95 KVAAARVRIPGS-GVCPHCQGQLRPLRLDQEERKELRERLLVLAEEKQAAWKSAGKLVLSSLASPGSGXXXXXXXXXXXXXXXXXXGPSPSKIISLRALEAWLNARP--PFDVVLDAPNIAYYGQNFGDGRFNFNQIDIVLKALKAQGKRAFLVIPVKYTSRRIRDHVHREEGQGRGGGRVRALDDEETAMLERWTDEGIVYRIPRGQLDDLYWMYATVAARSDTAS-------------------------SPMIAISNDCMRDHWLDLLEARPFLRWKTTQVQSYRFDYSV--EDNMPLRVTFSEMG-FSREAQ 380 +V A RV + S GVCP R + L +ER L + LL L+ E+ A+ G G LR+ WL R PF ++D N+ YY Q+F GRFN++QI+ +++ L +G+ +V+P KY R+ H GQ V+ LD EE A++ R +EG +YR+P LDD YWM A+V+ +S ++S PM+ ++ND MRDH L+LLE R F RW + +Y F V E + FS+ FSRE Q Sbjct: 490 EVVACRVNLDRSTGVCPVTSAVQRLILLGPDERSRLHDDLLDLSAEQFEAFS----------REDGKGRYARD---------------------ELRSFSDWLARRTGRPFTAIIDGANVGYYMQSFDKGRFNYHQINYMVETLIDRGENPLVVVPGKYG----RERFHSSHGQ------VQRLDREEVAIMNRLAEEGRMYRVPPRCLDDFYWMLASVSDQSSSSSRGPEDGPSDLSFVPGDDPRGRFPGTRPML-VTNDQMRDHKLELLEPRLFRRWYGCHIVNYSFTAFVLGESVAGNEIVFSQADCFSREIQ 763
BLAST of NO05G00200 vs. NCBI_GenBank
Match: XP_002181499.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46713.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 116.3 bits (290), Expect = 2.700e-22 Identity = 94/358 (26.26%), Postives = 147/358 (41.06%), Query Frame = 0 Query: 98 AARVRI-PGSGVCPHCQGQLRPLRLDQEERKELRERLLVLAEEKQAAWKSAGKLVLSSLASPGSGXXXXXXXXXXXXXXXXXXGPSPSKIISLRALEAWLNAR--PPFDVVLDAPNIAYYGQNFGDGRFNFNQIDIVLKALKAQGKRAFLVIPVKYTSRRIRDHVHREEGQGRGGGRVRALDDEETAMLERWTDEGIVYRIPRGQLDDLYWMYATVAARSDT------------------ASSPMIAISNDCMRDHWLDLLEARPFLRWKTTQVQSYRFDYSVEDNMPLRVTFSEMG------FSREAQRTAXXXXXXXXXXXXXXXXXXXXXXTIVTSGGDCLHLPSDKAEDEWLCL 429 A+RV I SG CP +LR + L+ E+ K ++ +L +A +Q ++ K + + L WL+ R PF +LD PNI YY QNF GRF+++Q+ V+ +L++ ++ +++P KY + RI + GG ++ L EE + G VY +P G LDD +WM ++++ ++ + PM+ ISND MRDH LDLLE + F RW + + Y F V + + ++G FSRE Q G C H P E+EW C+ Sbjct: 527 ASRVHIDQSSGHCPVSGVKLRLMSLEPEQAKAFKQNILDMATSEQDRYELKSKQKRAQRSD-----------------------------FILNEFMKWLDTRAGDPFTAILDGPNIGYYMQNFEGGRFSYHQLKFVVDSLESMNEKPLVILPRKYANDRIHLTI---------GGVMQTLKKEELQIRNYLIKTGRVYLVPPGHLDDYFWMLSSLSTQTTARNGRDLSVLPGDPGGRWPGARPML-ISNDQMRDHKLDLLEPKLFRRWYSNFMVHYNFAAFVGG----QCSHPDIGFNPADFFSREIQMNQR------------------------VGGASCWHFPLTDFENEWFCI 817
BLAST of NO05G00200 vs. NCBI_GenBank
Match: CBN74821.1 (multidrug resistance pump, putative [Ectocarpus siliculosus]) HSP 1 Score: 114.4 bits (285), Expect = 1.000e-21 Identity = 100/346 (28.90%), Postives = 154/346 (44.51%), Query Frame = 0 Query: 109 CPHCQGQLRPLRLDQEERKELRERLLVLA--EEKQAAWKSAGKLVLSSLASPGSGXXXXXXXXXXXXXXXXXXGPSPSKIISLRALEAWLNAR----PPFDVVLDAPNIAYY-GQNFGDGRFNFNQIDIVLKALKAQGKRAFLVIPVKYTSRRIRDHVHREEGQGRGGGRVRALDDEETAMLERWTDEGIVYRIPRGQLDDLYWMYATVAARSDTASSPMIAISNDCMRDHWLDLLEARPFLRWKTTQVQSYRFDYSVEDNMPLRVTFSEMGFSREAQRTAXXXXXXXXXXXXXXXXXXXXXXTIVTSGGDCLHLPSDKAEDEWLCLDFGQA-RKELDALIAAEGK 447 CP C G LR + L ER +RE L LA + K+ A K++ S G+ + L+ WL+A+ + V+D+ N+AY+ G F F+ Q+D++++AL+A+G+R ++I KY R+ D + RGG R + + A+++RW + +Y DD YWMYATVA PM ISND RDH + L E P+LRW+TTQ+ + Y ++D M + + G+ + A + S C H+P+ A+DEWLC+D + R LD L+ K Sbjct: 505 CPACGGALRAVGLTDGERARIRETLFGLAGLQVKKHARSRHTKMLARSRQRQGNENPFYSF-------------TDEDQKEQLQIFVDWLHAQRADGKTYTAVIDSANVAYHKGSAF---HFSLPQVDLMVQALEAKGERPLVLIAEKYID-RVGDLY--DNSPARGGFRYMS-NPLNKAIVKRWRAKSQLYECSDEASDDWYWMYATVA----FDDIPMTVISNDRTRDHRMSLAETVPYLRWRTTQLAQFELTYPLKDIMGKGL--NPQGWPANPPQVA-------------IQPPPAFTRDVQKSEQGCWHVPAG-ADDEWLCIDVQRGLRMGLDKLMPTPRK 810
BLAST of NO05G00200 vs. NCBI_GenBank
Match: GAX09314.1 (hypothetical protein FisN_32Hh010 [Fistulifera solaris]) HSP 1 Score: 112.8 bits (281), Expect = 3.000e-21 Identity = 104/370 (28.11%), Postives = 156/370 (42.16%), Query Frame = 0 Query: 96 VAAARVRIPG-SGVCPHCQGQLRPLRLDQEERKELRERLLVLAEEKQAAWKSAGKLVLSSLASPGSGXXXXXXXXXXXXXXXXXXGPSPSKIISLRALEAWLNAR--PPFDVVLDAPNIAYYGQNFGDGRFNFNQIDIVLKALKAQGKRAFLVIPVKYTSRRIRDHVHREEGQG---RGGGRVRALDDEETAMLERWTDEGIVYRIPRGQLDDLYWMYATVAARSDT-----ASSPM-----------------------IAISNDCMRDHWLDLLEARPFLRWKTTQVQSYRFDYSVEDNMPLRVTFSEM---GFSREAQRTAXXXXXXXXXXXXXXXXXXXXXXTIVTSGGDCLHLPSDKAEDEWLCL 429 V A RV+I +G+CP Q QLR LRL ++RKELR R+L LA++ Q + + + V S S SP L +L R PPF +++D N+ YY QNF GRF+F+QI ++ L+ +G+ A +V+P KY +RD + G G + + + L +EE A+ + VY + G LDD YW+ A+V +++ +SS + + ISND MRDH L ++E + F RW + + +Y F V R + +SRE Q + G H P DEW C+ Sbjct: 468 VIAERVQIDSTTGICPVTQVQLRLLRLTSDQRKELRMRMLDLAQDNQRQY-TPNESVSSVTPEQNS--------------KGNKIDKSP-----LLDFMTFLQERSGPPFTIIVDGANVGYYMQNFQQGRFSFHQIQWMVDDLQHRGEHALVVLPQKY----MRDVFNISVGAGGFDQRRAQRQVLTEEEKAIRDHLVARKQVYVVQPGSLDDFYWITASVTDQTNAIATLISSSELTIGGDELWVAPDNSKGRWPGARPLLISNDRMRDHKLSMMEPQLFRRWFSNYMVNYSFLAYVSGASRARSDIHFLAADAYSREIQSNP------------------------LEDGRIAWHFPLQDTTDEWFCV 789
BLAST of NO05G00200 vs. NCBI_GenBank
Match: XP_012194446.1 (hypothetical protein SPRG_00840 [Saprolegnia parasitica CBS 223.65] >KDO34779.1 hypothetical protein SPRG_00840 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 111.7 bits (278), Expect = 6.700e-21 Identity = 66/193 (34.20%), Postives = 96/193 (49.74%), Query Frame = 0 Query: 191 ALEAWLNARPPFDVVLDAPNIAYYGQNFGDGRFNFNQIDIVLKALKAQGKRAFLVIPVKYTSRRIRDHVHREEGQGRGGGRVRALDDEETAMLERWTDEGIVYRIPRGQLDDLYWMYATVAARSDTASSPMIAISNDCMRDHWLDLLEARPFLRWKTTQVQSYRFDYSVEDNMPLRVTFSEMG-FSREAQRTA 383 A + WL+A PFDV+LDA NI Y+ QNF G F + QI VL+A +A+GK+ +V+ RR +D R + DE M++ W D+G+++ G DD YW+YA V T + +SND MRDH ++ F RWK + Y D + + TF E +S+ +Q A Sbjct: 283 AFKEWLDAHGPFDVLLDAANIGYFSQNFEGGGFKYTQIQRVLQAYQARGKKVLIVL----HKRRTKD---------------REVPDELRPMVQSWKDDGVMFNCRPGNNDDWYWLYAAVKLGGRT-----LVVSNDEMRDHHFSMIANVDFQRWKERHLVHY-------DKVNGKFTFDEPSVYSKRSQALA 444
BLAST of NO05G00200 vs. NCBI_GenBank
Match: XP_002293707.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED88716.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 111.3 bits (277), Expect = 8.700e-21 Identity = 85/291 (29.21%), Postives = 135/291 (46.39%), Query Frame = 0 Query: 106 SGVCPHCQGQLRPLRLDQEERKELRERLLVLAEEKQAAWKSAGKLVLSSLASPGSGXXXXXXXXXXXXXXXXXXGPSPSKIISLRALEAWLNAR--PPFDVVLDAPNIAYYGQNFGDGRFNFNQIDIVLKALKAQGKRAFLVIPVKYTSRRIRDHVHREEGQGRGGGRVRALDDEETAMLERWTDEGIVYRIPRGQLDDLYWMYATVAARSDT------------------ASSPMIAISNDCMRDHWLDLLEARPFLRWKTTQVQSYRFDYSVEDNMPLRVTFSEMGFSR 377 SG+CP + Q R + L+ ++RK+L + LL L+ K+ L++ A G + L+ WLN R PF ++D NI Y+ Q+F GRFN++QI + L+A+G+ +VIP KY + ++E Q LD E +++ +G +Y++P LDDLYWM ++V+ ++ + + PM+ +SND MRDH L+LLE R F RW + +Y F V V +E+GFS+ Sbjct: 635 SGICPVTKSQQRLIVLEPDQRKQLHDDLLELS-----------KVQLANFAGKKEGE------------------STERAAEQLQIFSNWLNTREGEPFTAIVDGANIGYFMQSFDKGRFNYHQIKFMCDTLEARGENPLVVIPNKYGYNEF--YSSKKEYQ--------KLDPVEIKIMKDLRSQGKLYQVPPRCLDDLYWMLSSVSDQTVSRGGRDLSVPSNDPSGRWPGTRPML-VSNDQMRDHKLELLEPRLFRRWYGCHMVNYNFTAFVNGE---SVAGNEIGFSQ 882
BLAST of NO05G00200 vs. NCBI_GenBank
Match: GAX27973.1 (hypothetical protein FisN_32Lh010 [Fistulifera solaris]) HSP 1 Score: 108.6 bits (270), Expect = 5.700e-20 Identity = 102/374 (27.27%), Postives = 156/374 (41.71%), Query Frame = 0 Query: 96 VAAARVRIPG-SGVCPHCQGQLRPLRLDQEERKELRERLLVLAEEKQAAWKSAGKLVLSSLASPGSGXXXXXXXXXXXXXXXXXXGPSPSKIISLRALE--AWLNAR--PPFDVVLDAPNIAYYGQNFGDGRFNFNQIDIVLKALKAQGKRAFLVIPVKYTSRRIRDHVHREEGQG---RGGGRVRALDDEETAMLERWTDEGIVYRIPRGQLDDLYWMYATVA----------ARSDTASSPM--------------------IAISNDCMRDHWLDLLEARPFLRWKTTQVQSYRFDYSVEDNMPLRVTFSEM---GFSREAQRTAXXXXXXXXXXXXXXXXXXXXXXTIVTSGGDCLHLPSDKAEDEWLCL 429 + A RV+I +G CP Q QLR LRL ++RK LR R+L LA++ Q + S++ S SK+ + L+ +L R PPF +++D N+ YY QNF GRF+F+QI ++ L+ +G+ A +V+P KY +RD + G G + + + L +EE A+ + E VY + G LDD YW+ A+V + SD+ ++ + ISND MRDH L ++E + F RW + + +Y F V R + +SRE Q + G H P DEW C+ Sbjct: 447 IIAERVQIDNTTGRCPVTQVQLRLLRLTSDQRKALRMRMLDLAQDNQRQYTPN-----ESVSEKNS---------------------KSSKVDNSPLLDFMTFLQERSGPPFTIIVDGANVGYYMQNFQHGRFSFHQIQWMVDDLQRRGEHALVVLPQKY----MRDVFNISVGAGGFDQRRAQRQVLTEEEKAIRDLLVAEKQVYVVQPGSLDDFYWITASVTDQTKAIAGLISSSDSEATTSGDELWVPPDNAEGRWPGARPLLISNDRMRDHKLSMMEPQLFRRWFSNYMVNYSFLAYVSGASRARSDIHFLAADAYSREIQSNP------------------------LKDGRIAWHFPLQDTTDEWFCV 766
BLAST of NO05G00200 vs. NCBI_GenBank
Match: XP_008605204.1 (hypothetical protein SDRG_01457 [Saprolegnia diclina VS20] >EQC41490.1 hypothetical protein SDRG_01457 [Saprolegnia diclina VS20]) HSP 1 Score: 107.1 bits (266), Expect = 1.600e-19 Identity = 58/163 (35.58%), Postives = 83/163 (50.92%), Query Frame = 0 Query: 191 ALEAWLNARPPFDVVLDAPNIAYYGQNFGDGRFNFNQIDIVLKALKAQGKRAFLVIPVKYTSRRIRDHVHREEGQGRGGGRVRALDDEETAMLERWTDEGIVYRIPRGQLDDLYWMYATVAARSDTASSPMIAISNDCMRDHWLDLLEARPFLRWKTTQVQSY 354 A + WL+A PFDV+LDA NI Y+ QNF G F + QI VL+A +A GK+ +V+ RR +D R + + AM++ W D+G+++ G DD YW+YA V T + +SND MRDH ++ F RWK + Y Sbjct: 283 AFKEWLDANGPFDVLLDAANIGYFSQNFEGGGFKYTQIQRVLQAYQALGKKVLIVL----HKRRTKD---------------REVPEALRAMVQSWKDDGVMFNCRPGNNDDWYWLYAAVKLGGRT-----LVVSNDEMRDHHFSMIANVDFQRWKERHLVHY 421 The following BLAST results are available for this feature:
BLAST of NO05G00200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G00200 ID=NO05G00200|Name=NO05G00200|organism=Nannochloropsis oceanica|type=gene|length=4624bpback to top protein sequence of NO05G00200.4 >NO05G00200.4-protein ID=NO05G00200.4-protein|Name=NO05G00200.4|organism=Nannochloropsis oceanica|type=polypeptide|length=579bpback to top protein sequence of NO05G00200.3 >NO05G00200.3-protein ID=NO05G00200.3-protein|Name=NO05G00200.3|organism=Nannochloropsis oceanica|type=polypeptide|length=716bpback to top protein sequence of NO05G00200.2 >NO05G00200.2-protein ID=NO05G00200.2-protein|Name=NO05G00200.2|organism=Nannochloropsis oceanica|type=polypeptide|length=614bpback to top protein sequence of NO05G00200.1 >NO05G00200.1-protein ID=NO05G00200.1-protein|Name=NO05G00200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=502bpback to top Synonyms
Publications
|