NO04G05300, NO04G05300 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO04G05300 vs. NCBI_GenBank
Match: BAN02464.1 (hypothetical protein YM304_21500 [Ilumatobacter coccineus YM16-304]) HSP 1 Score: 119.4 bits (298), Expect = 3.800e-23 Identity = 92/280 (32.86%), Postives = 136/280 (48.57%), Query Frame = 0 Query: 12 AVILSIRSLAAAGS-FENFTLGTINLQQGWTVQDSFGTSVGTLFDQTIQDTQNSGRVWRMSNAHTTSGFSNHPFSPTTAQVAGEPGSSLWNDFGSDHTKPKNPPGYRANATIATFYTRVNFTSAT-GSPQPGLSLGLSLCAKQSNWCMTLIQLNDNGAGIDIVY--WDNTVNQFNSG-SIFSSTRIASGLSYTAVHSLEMVTYFKDGFNNDVVNIFLDGTLIHTGSTWEVYYYFLGDVDIQPRLQAVDSLLVRSSGTAQPEYEDGGFFFTEIDVSTYIPP 287 A+ I S A GS FE+F LG+++ Q GW + + V D + R R+SNA T+ GF + FS + AGE + + G T P+ +F +F SA G+ QPGLS+ +S + M + + D G+++ Y +D T+ + F T +A+GL TAVH+ + F DG +NDVV +F+DGTL+HTG +WE Y+ P + VDSLL R SGTA P GF ++ + + PP Sbjct: 11 AINTPIASADAVGSDFESFALGSVDGQDGWEISGPYDVEV---VDASATHPSLGNRSLRISNAVTSGGFGDQTFSKPLTEEAGETDA----ENGGKSTGPRQ----------TSFEAEWSFASAAPGAEQPGLSVVVS-PDRGDGGRMGWLGMTDTPTGLEVSYYGYDTTLGGTCADLDNFVFTTVATGLDRTAVHTARLRMGFNDGVDNDVVEVFVDGTLVHTGKSWEDYFRNCE----PPEPRTVDSLLFRVSGTAAPATSGFGFLIDDVSLESSSPP 268
BLAST of NO04G05300 vs. NCBI_GenBank
Match: WP_041298197.1 (HYR domain-containing protein [Ilumatobacter coccineus]) HSP 1 Score: 119.4 bits (298), Expect = 3.800e-23 Identity = 92/280 (32.86%), Postives = 136/280 (48.57%), Query Frame = 0 Query: 12 AVILSIRSLAAAGS-FENFTLGTINLQQGWTVQDSFGTSVGTLFDQTIQDTQNSGRVWRMSNAHTTSGFSNHPFSPTTAQVAGEPGSSLWNDFGSDHTKPKNPPGYRANATIATFYTRVNFTSAT-GSPQPGLSLGLSLCAKQSNWCMTLIQLNDNGAGIDIVY--WDNTVNQFNSG-SIFSSTRIASGLSYTAVHSLEMVTYFKDGFNNDVVNIFLDGTLIHTGSTWEVYYYFLGDVDIQPRLQAVDSLLVRSSGTAQPEYEDGGFFFTEIDVSTYIPP 287 A+ I S A GS FE+F LG+++ Q GW + + V D + R R+SNA T+ GF + FS + AGE + + G T P+ +F +F SA G+ QPGLS+ +S + M + + D G+++ Y +D T+ + F T +A+GL TAVH+ + F DG +NDVV +F+DGTL+HTG +WE Y+ P + VDSLL R SGTA P GF ++ + + PP Sbjct: 23 AINTPIASADAVGSDFESFALGSVDGQDGWEISGPYDVEV---VDASATHPSLGNRSLRISNAVTSGGFGDQTFSKPLTEEAGETDA----ENGGKSTGPRQ----------TSFEAEWSFASAAPGAEQPGLSVVVS-PDRGDGGRMGWLGMTDTPTGLEVSYYGYDTTLGGTCADLDNFVFTTVATGLDRTAVHTARLRMGFNDGVDNDVVEVFVDGTLVHTGKSWEDYFRNCE----PPEPRTVDSLLFRVSGTAAPATSGFGFLIDDVSLESSSPP 280
BLAST of NO04G05300 vs. NCBI_GenBank
Match: WP_095045611.1 (hypothetical protein [Candidatus Promineofilum breve] >CUS06327.1 exported protein of unknown function [Candidatus Promineofilum breve]) HSP 1 Score: 115.5 bits (288), Expect = 5.500e-22 Identity = 94/291 (32.30%), Postives = 142/291 (48.80%), Query Frame = 0 Query: 13 VILSIRSLAAAG-----SFENFTLGTINLQQGWTVQDSFGTSVGTLFDQTIQDTQNSG--------RVWRMSNAHTTSGFSNHPFSPTTAQVAGEPGSSLWNDFGSDHTKPKNPPGYRANATIATFYTRVNFTSATGSPQPGLSLGLSLCAKQSNWCMTLIQLNDNGAGIDIVYWDNTVNQFNS---GSIFSSTRIASGLSYTAVHSLEMVTYFKDGFNNDVVNIFLDGTLIHTGSTWEVYYYFLGDVDIQPR-LQAVDSLLVRSSGTAQPEYEDGGFFFTEIDVSTYIPP 287 +++S+ +L A+ FE++T+G IN Q GW FD I + G R R+SNA+T F + FS AGE +S N+ S T+ P Y A A ++ G+ QPGL +G+S + M+L +L D AG+++ ++D + + G F +A+GL+ AVH++ + F DG NNDVV +++DG L+HTG++WE Y+ D +P + VDSLL R+SGTA P GF +VS Y P Sbjct: 20 LLVSLGALTASADSQVIDFESYTVGNINGQDGW-------IKTNANFDAAIVNQSTFGLAYPAFGSRSLRISNAYTVGSFGDQTFSKPLVDEAGE--TSAANNGMSGGTR---QPYYEATFDFA--------STVPGAEQPGLMVGVS-PDRGDGARMSLFRLYDKPAGLEVEFYDFDQTRPGTCVDGLDFQPATVATGLARNAVHNVRITMNFIDGVNNDVVKVYVDGGLVHTGTSWEDYFR-----DCEPNPTRTVDSLLFRASGTAAPATSGNGFLID--NVSQYSGP 282
BLAST of NO04G05300 vs. NCBI_GenBank
Match: PIR83989.1 (hypothetical protein COU18_01105 [Candidatus Kaiserbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_51_14]) HSP 1 Score: 112.5 bits (280), Expect = 4.600e-21 Identity = 90/284 (31.69%), Postives = 132/284 (46.48%), Query Frame = 0 Query: 16 SIRSLAAAGSFENFTLGTINLQQGWTVQDSFGTSVGTLFDQTIQDTQNSGRVWRMSNAHTTSGFSNHPFSPTTAQVAGEPGSSLWNDFGSDHTKPKNPPGYRANATIATFYTRVNFTSATGSPQPGLSLGLSLCAKQSNWCMTLIQLNDNGAGIDIVYWDNTVNQFNSGSIFSSTRIASGLSYTAVHSLEMVTYFKDGFNNDVVNIFLDGTLIHTGSTWEVYYYFLGDVDIQPRL-----QAVDSLLVRSSGTAQPEYEDGGFFFTEIDV---STYIPPAVPVI 292 S+ + AAA FE++TLG I+ Q GW+ + V + F TQ+ R SNA T+ F + FS + AGE T P G+ F S QPGL + +S + M+ + +D GI + ++D V ++FS T +A+GLS H+ + FK+G +NDVV I++DG L+HTG+TWE YY F D + P L + VDSLL + GTA P G+ +++ IPPA V+ Sbjct: 26 SVFADAAALDFESYTLGNIHGQDGWSKTGGYDVEVTSSFGVLGFGTQS----LRFSNAVTSGSFGDQTFSKSLVDEAGET------------TAPNG--GFSGGTRQNHFEAEFEIRPMQLSQQPGLFMSVS-PDRGDGARMSYLGFSDEADGIKVNFFD--VTSVTDPAVFSETIVATGLSRAVTHTAKFEIDFKNGPSNDVVKIYIDGVLVHTGTTWENYYRF--DDESNPGLAVNEGRTVDSLLFMARGTAAPTTLGLGYLIDNVELLSSMVVIPPATLVV 286
BLAST of NO04G05300 vs. NCBI_GenBank
Match: OGG41797.1 (hypothetical protein A2837_01115 [Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_46_22]) HSP 1 Score: 103.2 bits (256), Expect = 2.800e-18 Identity = 76/268 (28.36%), Postives = 122/268 (45.52%), Query Frame = 0 Query: 16 SIRSLAAAGSFENFTLGTINLQQGWTVQDSFGTSVGTLFDQTIQDTQNSGRVWRMSNAHTTSGFSNHPFSPTTAQVAGEPGSSLWNDFGSDHTKPKNPPGYRANATIATFYTRVNFTSATGSPQPGLSLGLSLCAKQSNWCMTLIQLNDNGAGIDIVYWDNT-VNQFNSGSIFSSTRIASGLSYTAVHSLEMVTYFKDGFNNDVVNIFLDGTLIHTGSTWEVYYYFLGDVDIQPR-LQAVDSLLVRSSGTAQPEYEDGGFFFTEIDVS 282 S+ + +F+ F GT+N Q W+ S+ V T + + R+SNA T+ F N F+ TA AGE + N F ++ PG ++ T++ SP G + M+ + D GID+V++D T S + ++ T +A+ L H+++ V F DG NDVV I++D L HTG++WE YY + + + L VD+L+ R+ GTA P + GF F + +S Sbjct: 198 SLTDSVSMTTFDTFATGTVNAQNSWSSTGSYDQEV---VPNTYGFEEFGCKSLRISNAVTSGAFGNQTFAAPTAGTAGESSVAANNHFEAEFDIASTMPGLQSGLTLSV------------SPDDG-----------NGSRMSYLSFTDTADGIDVVFYDVTNTGPLPSVTSWNDTEVAT-LDRDESHTIKFVMDFVDGPGNDVVKIYIDDVLAHTGTSWEDYYRYDAEQNGNGNALFGVDTLIFRAGGTAVPANDSNGFLFDNMSMS 438
BLAST of NO04G05300 vs. NCBI_GenBank
Match: OGH16902.1 (hypothetical protein A2869_01580 [Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_40_58] >OGH26338.1 hypothetical protein A3C30_04490 [Candidatus Levybacteria bacterium RIFCSPHIGHO2_02_FULL_40_18] >OGH31298.1 hypothetical protein A3E43_02745 [Candidatus Levybacteria bacterium RIFCSPHIGHO2_12_FULL_40_31] >OGH40800.1 hypothetical protein A2894_02180 [Candidatus Levybacteria bacterium RIFCSPLOWO2_01_FULL_40_64]) HSP 1 Score: 100.1 bits (248), Expect = 2.400e-17 Identity = 80/272 (29.41%), Postives = 128/272 (47.06%), Query Frame = 0 Query: 25 SFENFTLGTINLQQGWTVQDSFGTSVGTLFDQTIQDTQN----SGRVWRMSNAHTTSGFSNHPFSPTTAQVAGEPGSSLWNDFGSDHTKPKNPPGYRANATIATFYTRVNFTSATGSP--QPGLSLGLSLCAKQSNWCMTLIQLNDNGAGIDIVYWDNTVNQFNSGSIFSSTRIASGLSYTAVHSLEMVTYFKDGFNNDVVNIFLDGTLIHTGSTWEVYYYFLGDVDIQPRLQAVDSLLVRSSGTAQPEYEDGGFFFTEID-VSTYIPPAVP 290 +FE ++ G ++ Q GWT + G ++D + + R R+SNA T+ F + FS GE D T P G R N F T SA P QPGL + +S + M+ + D G++I+++D V ++ + F T + + AVH++++V DG +NDVV +++DGTL HTG++WE YY + + + + V ++L R+ GTA PE GF F + +S+ PP P Sbjct: 34 TFETYSFGNVHGQDGWTSAGAAGVGC-AMYDHAVDTSYGRPGFGARSLRISNAVTSGCFGDQTFSKPLTDSVGE----------VDATAGTFPEGTRQN----HFETEFQIASAADPPAYQPGLFVSVS-PDRGDGSRMSYVGFEDVADGLNIIFYD--VQGTSNPANFVLTDLGT-YDRNAVHTIKLVMDVFDGPSNDVVEVYIDGTLAHTGTSWENYYRYDSEASAEQSPRIVRTVLFRTGGTAVPETLGKGFLFDNLTLMSSTRPPEEP 286
BLAST of NO04G05300 vs. NCBI_GenBank
Match: OGG86184.1 (hypothetical protein A2392_01850 [Candidatus Kaiserbacteria bacterium RIFOXYB1_FULL_46_14]) HSP 1 Score: 96.3 bits (238), Expect = 3.400e-16 Identity = 74/261 (28.35%), Postives = 115/261 (44.06%), Query Frame = 0 Query: 25 SFENFTLGTINLQQGWTVQDSFGTSVGTLFDQTIQDTQNSGRVWRMSNAHTTSGFSNHPFSPTTAQVAGEPGSSLWNDFGSDHTKPKNPPGYRANATIATFYTRVNFTSATGSPQPGLSLGLSLCAKQSNW---CMTLIQLNDNGAGIDIVYWDNTVNQFNSGSIFSSTRIASGLSYTAVHSLEMVTYFKDGFNNDVVNIFLDGTLIHTGSTWEVYYYFLGDVDIQPR-LQAVDSLLVRSSGTAQPEYEDGGFFFTEIDVS 282 +F+ F GT+N Q W+ + V T T+ + R+SNA T F + F+ T AGE + N F A IA S PGL GL+L + M+ + D GID+V++D T G+ + + + L H+++ V F DG ND+V I++DG+L HTG++WE YY + + L VD+L+ R+ G+A P ++ GF F + +S Sbjct: 180 TFDTFATGTVNAQNSWSATGPYDQEV---VPNTYGFTEFGCKSLRISNAVTNGAFGDQTFAAPTVTTAGESSVAANNHF-------------EAQFDIA-------------STMPGLQSGLALSVSPDDGNGSRMSYLSFTDTSDGIDVVFYDVTNAGPLPGTTSWNDQEIATLDRDESHTIKFVMDFVDGPANDIVKIYIDGSLAHTGTSWEDYYRYDAEQSGNGNALFPVDTLIFRAGGSAVPANDNKGFLFDNMSLS 411
BLAST of NO04G05300 vs. NCBI_GenBank
Match: KKT98724.1 (Cna B domain protein [Candidatus Collierbacteria bacterium GW2011_GWC2_45_15] >KKU28771.1 Cna B domain protein [Candidatus Collierbacteria bacterium GW2011_GWE1_46_18]) HSP 1 Score: 94.7 bits (234), Expect = 1.000e-15 Identity = 90/297 (30.30%), Postives = 143/297 (48.15%), Query Frame = 0 Query: 25 SFENFTLGTINLQQGWTVQDSFGTSVGTLFDQTIQDTQNSGRVWRMSNAHTTSGFSNHPFSPTTAQVAGEPGSSLWNDFGSDHTKPKNPPGYRANATIATFYTRVNFTSATGSPQPGLSLGLSLCAKQSNWCMTLIQLNDNGAGIDIVYWDNTVNQFNSGSIFSSTRIASGLSYTAVHSLEMVTYFKDGFNNDVVNIFLDGTLIHTGSTWEVYYYFLGDVDIQPRLQAVDSLLVRSSGTAQPEYEDG-GFFFTEIDVSTYIPPAVPVILPTPV-GERVILQFDLTDGDSNNVSGQIE 320 +F++F+LG++N Q GW V S+ + + T ++ + +R+SNA T F + FS + AGE +S N+ S T+ + F + + SA + Q GLS+ +S + M+ ++ D I VY+D+ V+ F I + R S ++++ V F DG ND+V I++DG+L HTG++WE YY D + P + VDSLL+R+ GT +G GF F +S+ VPV + + +LTDGD N S Q E Sbjct: 228 TFDSFSLGSVNGQGGWKVTGSYDQEI---VNNTYGLSEFGCKTFRLSNAVATGSFGDQTFSYSLGNEAGE--TSAQNNGLSGGTRQNH------------FEAQFDIASAISNQQTGLSISIS-PDRGDGARMSYLRFADQSDKIH-VYFDDYVSGFVETEIDTLNRNKS-------YTIKFVMDFVDGPANDIVKIYIDGSLKHTGTSWEDYY---RDFEHNP-TRTVDSLLLRAGGTGGVPGNNGKGFIFDNFSLSS-STVVVPVCGNGAIESDEQCDDGNLTDGDGCNSSCQTE 493
BLAST of NO04G05300 vs. NCBI_GenBank
Match: XP_005852440.1 (elicitin-like protein 6 precursor, partial [Nannochloropsis gaditana CCMP526] >EKU23392.1 elicitin-like protein 6 precursor, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 92.0 bits (227), Expect = 6.500e-15 Identity = 40/88 (45.45%), Postives = 61/88 (69.32%), Query Frame = 0 Query: 351 FVLGTPPIYIDISTDAVISPPVLVCLTYATSAFPENTEPQIFHFIGERWVDATTRINTTAQIVCGEVQSLSPFAVGSLIITPDAFAVN 439 F LG PP+YI IST A+ + +CL Y+ S FP TEP++FHFI + W D TT +++ ++++CG V S SPFA+G ++ T DA +++ Sbjct: 1 FSLGNPPVYIFISTTAIFDGDIDLCLPYSKSTFPRGTEPRLFHFINDTWDDVTTEVDSESELLCGRVTSFSPFALG-IVATTDAPSIS 87
BLAST of NO04G05300 vs. NCBI_GenBank
Match: PJE65569.1 (hypothetical protein COU91_00970 [Candidatus Saccharibacteria bacterium CG10_big_fil_rev_8_21_14_0_10_47_8]) HSP 1 Score: 90.5 bits (223), Expect = 1.900e-14 Identity = 70/264 (26.52%), Postives = 126/264 (47.73%), Query Frame = 0 Query: 26 FEN--FTLGTINLQQGWTVQDSFGTSVGTLFDQTIQDTQNSG---RVWRMSNAHTTSGFSNHPFSPTTAQVAGEPGSSLWNDFGSDHTKPKNPPGYRANATIATFYTRVNFTSATGSPQPGLSLGLSLCAKQSNWCMTLIQLNDNGAGIDIVYWD--NTVNQFNSGSIFSSTRIASGLSYTAVHSLEMVTYFKDGFNNDVVNIFLDGTLIHTGSTWEVYYYFLGDVDIQPRLQAVDSLLVRSSGTAQPEYEDGGFFFTEIDVST 283 FEN + +G+I+ Q GW+ +V +DQ + T G + +R+S+A T+ F + F+ GE S+ S + + IA ++ QPGL + +S + M+ ++ D +GI++ + D T N N F T+IA+GL+ H++++ DG +NDVV +++DG L+HTG++WE YY F + + + V ++++++ GTA P GF F + + + Sbjct: 50 FENPPYIVGSISGQDGWS------NAVNPTYDQGVVSTSVPGFGSQAFRISDAVTSGSFGDWVFAKPLINSVGETAST-----ASTFSAGTKQGHFEMQFDIA--------STVPDGQQPGLHISVS-PDRGDGSRMSYLRFEDGASGINVFFDDVQGTTNPAN----FVETQIATGLNRAIPHTVKLTMDTLDGSSNDVVKVWIDGVLVHTGTSWENYYRFDTEAAAEQSPRIVKTVIIQARGTATPGNNTFGFLFDNLSLKS 289 The following BLAST results are available for this feature:
BLAST of NO04G05300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G05300 ID=NO04G05300|Name=NO04G05300|organism=Nannochloropsis oceanica|type=gene|length=2069bpback to top protein sequence of NO04G05300.1 >NO04G05300.1-protein ID=NO04G05300.1-protein|Name=NO04G05300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=592bpback to top Synonyms
Publications
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