NO04G05250, NO04G05250 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO04G05250 vs. NCBI_GenBank
Match: EWM28900.1 (hypothetical protein Naga_100822g1 [Nannochloropsis gaditana]) HSP 1 Score: 212.6 bits (540), Expect = 4.100e-51 Identity = 98/113 (86.73%), Postives = 107/113 (94.69%), Query Frame = 0 Query: 199 GVKWRRGKWTPEEEAYVSRVTEAFHQGLLPLAAGTTLRSYLSDKLNCDPMRITKKFSGEGSIGKCIFHPCVPSQPLKLAETMMELDRLEAVWKHRLEEIRAVEFEFQQSASMS 312 G KWRRGKWTPEEE YV+RVTEAFHQGLLPLAAGTTLRSYL+DKLNCDPMRITKKFSG GSIGKCIFHPC+P QPLK+AE M+ELDRLEA+W+ RLEEIRAVE+EFQQSAS+S Sbjct: 152 GGKWRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCMPPQPLKMAEAMVELDRLEAIWRRRLEEIRAVEYEFQQSASLS 264
BLAST of NO04G05250 vs. NCBI_GenBank
Match: EWM28901.1 (hypothetical protein Naga_100822g1 [Nannochloropsis gaditana]) HSP 1 Score: 212.6 bits (540), Expect = 4.100e-51 Identity = 98/113 (86.73%), Postives = 107/113 (94.69%), Query Frame = 0 Query: 199 GVKWRRGKWTPEEEAYVSRVTEAFHQGLLPLAAGTTLRSYLSDKLNCDPMRITKKFSGEGSIGKCIFHPCVPSQPLKLAETMMELDRLEAVWKHRLEEIRAVEFEFQQSASMS 312 G KWRRGKWTPEEE YV+RVTEAFHQGLLPLAAGTTLRSYL+DKLNCDPMRITKKFSG GSIGKCIFHPC+P QPLK+AE M+ELDRLEA+W+ RLEEIRAVE+EFQQSAS+S Sbjct: 167 GGKWRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCMPPQPLKMAEAMVELDRLEAIWRRRLEEIRAVEYEFQQSASLS 279
BLAST of NO04G05250 vs. NCBI_GenBank
Match: XP_002177495.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51958.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 113.2 bits (282), Expect = 3.400e-21 Identity = 55/95 (57.89%), Postives = 67/95 (70.53%), Query Frame = 0 Query: 203 RRGKWTPEEEAYVSRVTEAFHQGLLPLAAGTTLRSYLSDKLNCDPMRITKKFSGEGSIGKCIFHPCV--PSQPLKLAETMMELDRLEAVWKHRLE 296 RRGKWT EEEAYV+RV + F+ G L AGTTLR++LS+KL CDPMRITKKF+G+ IGK +FHP V PS + + EL LE W+ RLE Sbjct: 227 RRGKWTVEEEAYVARVIQDFNSGFLDAPAGTTLRTFLSEKLQCDPMRITKKFTGDACIGKRVFHPAVRSPSNGTAIDKAQAELHGLERRWQRRLE 321
BLAST of NO04G05250 vs. NCBI_GenBank
Match: GAX14445.1 (hypothetical protein FisN_11Hh096 [Fistulifera solaris]) HSP 1 Score: 112.5 bits (280), Expect = 5.800e-21 Identity = 55/95 (57.89%), Postives = 66/95 (69.47%), Query Frame = 0 Query: 203 RRGKWTPEEEAYVSRVTEAFHQGLLPLAAGTTLRSYLSDKLNCDPMRITKKFSGEGSIGKCIFHPCV--PSQPLKLAETMMELDRLEAVWKHRLE 296 RRGKWT EEEAYV+RV + F+ G L AGTTLR+YLS+KL CDPMRITKKF+G+ IGK +FHP V P+ + + EL LE W RLE Sbjct: 158 RRGKWTAEEEAYVARVIQDFNSGFLDAPAGTTLRTYLSEKLQCDPMRITKKFTGDACIGKRVFHPAVRSPNNVSTIDKAQAELLHLEKRWHRRLE 252
BLAST of NO04G05250 vs. NCBI_GenBank
Match: XP_009034023.1 (hypothetical protein AURANDRAFT_70829 [Aureococcus anophagefferens] >EGB11680.1 hypothetical protein AURANDRAFT_70829 [Aureococcus anophagefferens]) HSP 1 Score: 111.3 bits (277), Expect = 1.300e-20 Identity = 52/93 (55.91%), Postives = 65/93 (69.89%), Query Frame = 0 Query: 203 RRGKWTPEEEAYVSRVTEAFHQGLLPLAAGTTLRSYLSDKLNCDPMRITKKFSGEGSIGKCIFHPCVPSQPLKLAETMMELDRLEAVWKHRLE 296 RRGKWT EEE YV RV F+ GLL A GTTLR+YLS+KLNCDPMRITKKF+G+ SIGK ++HP + + E+ LEA W+ +L+ Sbjct: 8 RRGKWTVEEERYVERVIRDFNNGLLHAAPGTTLRNYLSEKLNCDPMRITKKFTGDASIGKRVYHPRENAPEPAVERARREVAELEAAWRSKLQ 100
BLAST of NO04G05250 vs. NCBI_GenBank
Match: GAX97583.1 (Hypothetical protein PINS_005457 [Pythium insidiosum]) HSP 1 Score: 110.2 bits (274), Expect = 2.900e-20 Identity = 62/141 (43.97%), Postives = 84/141 (59.57%), Query Frame = 0 Query: 188 KRDQFVKNPPPGVK------WRRGKWTPEEEAYVSRVTEAFHQGLLPLAAGTTLRSYLSDKLNCDPMRITKKFSGEGSIGKCIFHPCVPSQPLKL--AETMMELDRLEAVWKHRLEEIRAVEFEFQQSASMSSHGSASFPP 321 +R + VKNP K R+GKWT EEE Y +++T F +GLLP+A GT LR YLS KLNC+PMRITKKF+G IGK +F PC P+ K+ + +EL LEA + RL+E + ++ ++ S S PP Sbjct: 1255 RRSRAVKNPNRSTKSKARPGLRKGKWTEEEERYAAQLTMYFKEGLLPIARGTMLRLYLSQKLNCEPMRITKKFTGGECIGKQVFRPCSPTPEAKVRRMQAQLELVALEAAFIKRLKENK------EEVPGLTDGDSGSIPP 1389
BLAST of NO04G05250 vs. NCBI_GenBank
Match: XP_009525453.1 (hypothetical protein PHYSODRAFT_299882 [Phytophthora sojae] >EGZ22736.1 hypothetical protein PHYSODRAFT_299882 [Phytophthora sojae]) HSP 1 Score: 108.2 bits (269), Expect = 1.100e-19 Identity = 63/146 (43.15%), Postives = 82/146 (56.16%), Query Frame = 0 Query: 180 ERARENFMKRDQFVKNPPPGVKWRRGKWTPEEEAYVSRVTEAFHQGLLPLAAGTTLRSYLSDKLNCDPMRITKKFSGEGSIGKCIFHPC--VPSQPLKLAETMMELDRLEAVWKHRLEEIR----AVEFEFQQSASMSSHGSASFP 320 +RAR + PG+ R+GKWT EE Y +++T F +GLLPL GT LR YLS KLNC+PMRITKKF+G IGK +F PC P +++ + +EL LEA + RL+E R EF +S S H S P Sbjct: 169 KRARTPKISNRSTKSKARPGL--RKGKWTEEESRYAAQLTNYFKEGLLPLERGTMLRLYLSQKLNCEPMRITKKFTGGECIGKQVFRPCSPTPESRVRIMQAQLELVALEAAFIKRLKENREDPPVPTDEFDVRSSSSGHRSRPVP 312
BLAST of NO04G05250 vs. NCBI_GenBank
Match: CBN74989.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 107.8 bits (268), Expect = 1.400e-19 Identity = 56/103 (54.37%), Postives = 69/103 (66.99%), Query Frame = 0 Query: 198 PGVKWRRGKWTPEEEAYVSRVTEAFHQGLLPLAAGTTLRSYLSDKLNCDPMRITKKFSGEGSIGKCIFHPCVPSQPLKLAET---MMELDRLEAVWKHRLEEI 298 P R+GKWTPEEE Y +++ F++GLLPLA GTTLRSYLS+KLNCDPMRITKKF+G IGK +F P V P L ET EL+ + + RLE + Sbjct: 249 PRAPVRKGKWTPEEEVYTTKIINDFNKGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGASCIGKRVFMP-VERTPENLIETHRSRRELEEMARKFHIRLESM 350
BLAST of NO04G05250 vs. NCBI_GenBank
Match: XP_008612958.1 (hypothetical protein SDRG_08838 [Saprolegnia diclina VS20] >XP_008612959.1 hypothetical protein, variant [Saprolegnia diclina VS20] >EQC33735.1 hypothetical protein SDRG_08838 [Saprolegnia diclina VS20] >EQC33736.1 hypothetical protein, variant [Saprolegnia diclina VS20]) HSP 1 Score: 107.8 bits (268), Expect = 1.400e-19 Identity = 53/99 (53.54%), Postives = 67/99 (67.68%), Query Frame = 0 Query: 202 WRRGKWTPEEEAYVSRVTEAFHQGLLPLAAGTTLRSYLSDKLNCDPMRITKKFSGEGSIGKCIFHPCVPSQPL---KLAETMMELDRLEAVWKHRLEEI 298 +R+GKWT EE Y R+T F +GLLPL GT LR YL+DKLNC+PMRITKKF+G+ IGK IF P +P PL ++ EL LE + HR+EE+ Sbjct: 69 FRKGKWTDEESVYAERMTHYFKEGLLPLEKGTMLRMYLADKLNCEPMRITKKFTGDECIGKQIFRP-LPPTPLVNARMQSVQTELKALETAFLHRIEEM 166
BLAST of NO04G05250 vs. NCBI_GenBank
Match: XP_012201238.1 (hypothetical protein SPRG_20254 [Saprolegnia parasitica CBS 223.65] >KDO28094.1 hypothetical protein SPRG_20254 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 107.8 bits (268), Expect = 1.400e-19 Identity = 53/99 (53.54%), Postives = 67/99 (67.68%), Query Frame = 0 Query: 202 WRRGKWTPEEEAYVSRVTEAFHQGLLPLAAGTTLRSYLSDKLNCDPMRITKKFSGEGSIGKCIFHPCVPSQPL---KLAETMMELDRLEAVWKHRLEEI 298 +R+GKWT EE Y R+T F +GLLPL GT LR YL+DKLNC+PMRITKKF+G+ IGK IF P +P PL ++ EL LE + HR+EE+ Sbjct: 57 FRKGKWTDEESVYAERMTHYFKEGLLPLEKGTMLRMYLADKLNCEPMRITKKFTGDECIGKQIFRP-LPPTPLVNARMQSVQTELKALETAFLHRIEEM 154 The following BLAST results are available for this feature:
BLAST of NO04G05250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G05250 ID=NO04G05250|Name=NO04G05250|organism=Nannochloropsis oceanica|type=gene|length=3752bpback to top protein sequence of NO04G05250.1 >NO04G05250.1-protein ID=NO04G05250.1-protein|Name=NO04G05250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=746bpback to top Synonyms
Publications
|