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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr4 | genome | chr4:1433202..1435634 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO04G05140.1 ID=NO04G05140.1|Name=NO04G05140.1|organism=Nannochloropsis oceanica|type=mRNA|length=1710bp AACAGGCGAGTAACTCACAACACACATTCACCTCACACTCCTGTCTACTT TTGCCCGCTATCCGAGAGGTGCAGACGCTACAATCAGCAACCCATCATCA AGATGCCCTCTCTGCCTCCCGCCTCGCCTCCAGACGTCCAACTCTCCCCA GCTCGTGCGAAGGAGGGCCCGACCGAAGTCGAAGACATGCCAGTGGCGGC CAAGTCGGACGAAAAAGTTGGAGTTTCGCCTTCCAGTTCGTCCGCTCCCC TGAGCTACGACCACATGGATGAGACCGGGTTCAAGGACAGGCGAAGCAAC GAGGAGGATGATGGGGAGGACGATGAGGAGGAGGAAGATGGGAAGAAAAG CGCCCGTAGGGCGCGTCTCAAGGCGGAGGGTGGGGGGGGAGACGAGATCG CGGAGGGGGAGGATGCCGCAATGGAGGAGGAGAAGGAAGGCGGGGAAGGA CAGGAACGAGAGGAGCAGCAGCAGGGCAAGAAGGAGGTGAATGATTGGAC TTACGTGCACATATCGAACCTTCGCTTAAAAACCACAGAGAGTGAGTTGG AAGCACTCTTCTCCTCCGTCGGTCCCCTCCTCTTGTGCTACATTCGGCCT AAGCGCAGCGACCGGAGTGAGAGTCTCACGGGACTAGTCAGGTTTGAGAA GAAGGAGGATGCCGCGGCGGCCGTTACGAAGCTGTGCGGAGAACGTCTGC ATGACCGTGTCCTCAAGCCCGAGCTTATCAACCGTCCGTTTCTTTTCTTG GACGATAACGGCCGCCTGGTGGAGTCCAAGGGAAGGGACCGAGAGAAGGA CAAGGAGCGGAAGGCAGCGCTTAAGGCGGCAGCGCGGCGGGAAGGAGGGA GGGAGGGAGGGAGGGAAGCAGGGAGGGATCGACGGATGGGGACGGGGAAT GGCGGAGGAGGTTGGCGGGGGAGGGAGGGAGGGAGGGAGAGGAGGGGGAG GGGGTGGTCACCTCCGGGGAGGAGGACGGGACGATCCAGGTCACCTTTGC GGCGAGGACGCTCTCGGTCTTTTGAACGGCAGGAAATCCGGCGGTTGGAG GAGGAGCGTTACCGGCTGGAGGAGGAGAGGCGACGCTTGGAGGAGGAGCG ACGACGATGGGCGTGGGAAAGGGAAGGAGGCGGGAAGGGGAGAGGGAGGG AGGGAGGGAGGTGGATGGAGGGAGGGGATCGGTGGGAGGGAGGGAGGGAG GGAGGGAGGGAGGGAGGGGGATGGCGGGAGGGGGGAGAGAGGCTGCGTGG GGCAGTGGCAGTGGTGGCGGCGAGGGCGGCAGGGAGGAGCCGAAGCAGGG AGAGGGAGAGGGGATGGGAGAGGGAGCAGCAGCAGCACTATCATCATCAC CATCAGGCCGCGTCTCATCATCTTCACCAGGGGAGGTGGTAGGGAGGGGA GCGGAGGGAGGGCAGGACGGACGAAGGGCAGGGGAGAGGAGGAAGGGAGG GAGGGAGGAAGGGAGGGAGGATTCGAAGAGGAGCAGGGGCCGGGCATTCC GAGAAGAAATATAATTTATAAGAGGAGCAAGAGGAGGAAAAGGAAGGAAG GATGGCAAGGAGAGGAGGAGAAGAAGAAAGAGAGGAAGGAAAACAGAAGA AAAAAAGCATGATGGTGATAACGAAGAAAGAGAAGAAGGAAGAGAACAAA AACACTGGAACAAGAGAAGAGGATGGTAAGGGGAACGAACGAAAGTAAGG AACCGCGGAA back to topprotein sequence of NO04G05140.1 >NO04G05140.1-protein ID=NO04G05140.1-protein|Name=NO04G05140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=430bp MPSLPPASPPDVQLSPARAKEGPTEVEDMPVAAKSDEKVGVSPSSSSAPL SYDHMDETGFKDRRSNEEDDGEDDEEEEDGKKSARRARLKAEGGGGDEIA EGEDAAMEEEKEGGEGQEREEQQQGKKEVNDWTYVHISNLRLKTTESELE ALFSSVGPLLLCYIRPKRSDRSESLTGLVRFEKKEDAAAAVTKLCGERLH DRVLKPELINRPFLFLDDNGRLVESKGRDREKDKERKAALKAAARREGGR EGGREAGRDRRMGTGNGGGGWRGREGGRERRGRGWSPPGRRTGRSRSPLR RGRSRSFERQEIRRLEEERYRLEEERRRLEEERRRWAWEREGGGKGRGRE GGRWMEGGDRWEGGREGGREGGGWREGGERLRGAVAVVAARAAGRSRSRE RERGWEREQQQHYHHHHQAASHHLHQGRW* back to topmRNA from alignment at chr4:1433202..1435634- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO04G05140.1 ID=NO04G05140.1|Name=NO04G05140.1|organism=Nannochloropsis oceanica|type=mRNA|length=2433bp|location=Sequence derived from alignment at chr4:1433202..1435634- (Nannochloropsis oceanica) AACAGGCGAGTAACTCACAACACACATTCACCTCACACTCCTGTCTACTT
TTGCCCGCTATCCGAGAGGTGCAGACGCTACAATCAGCAACCCATCATCA
AGATGCCCTCTCTGCCTCCCGCCTCGCCTCCAGACGTCCAACTCTCCCCA
GCTCGTGCGAAGGAGGGCCCGACCGAAGTCGAAGACATGCCAGTGGCGGC
CAAGTCGGACGAAAAAGGTGAGAGGTAGAGGAGCTGCTGCCGCTGCATGT
ATTGGAACCCGGTTCTCATTACTGACGCGTGCTCCTTCCGGTCTACCAAA
CAGTTGGAGTTTCGCCTTCCAGTTCGTCCGCTCCCCTGAGCTACGACCAC
ATGGATGAGACCGGGTTCAAGGACAGGCGAAGCAACGAGGAGGATGATGG
GGAGGACGATGAGGAGGAGGAAGATGGGAAGAAAAGCGCCCGTAGGGCGC
GTCTCAAGGCGGAGGGTGGGGGGGGAGACGAGATCGCGGAGGGGGAGGAT
GCCGCAATGGAGGAGGAGAAGGAAGGCGGGGAAGGACAGGAACGAGAGGA
GCAGCAGCAGGGCAAGAAGGAGGTGAATGATTGGACTTACGTGCACATAT
CGAACCTTCGCTTAAAAGTGAGTGACCCAAAGGAATGGAAGCCGGAAAAT
AGGAGGGAGGGAGGGAGGGAGGGCAGGAAAGGATGGACGACACAGATGCG
GTGTCGGAGGGCGATGCCACGTGAGTGATGGAACAAATTCTCAATTACGA
TGACGCAGACACAAATGTGTGACCATACATGCCCTTTTTCCTCACATCCC
TCTCTTCCTCCCTCCTTCTCTCCCTCCCCATTTCCTCGTGCCCCCAGACC
ACAGAGAGTGAGTTGGAAGCACTCTTCTCCTCCGTCGGTCCCCTCCTCTT
GTGCTACATTCGGCCTAAGCGCAGCGACCGGAGTGAGAGTCTCACGGGAC
TAGTCAGGTTTGAGAAGAAGGAGGATGCCGCGGCGGCCGTTACGAAGCTG
TGCGGGTGAGATGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGAAGGGAAG
GAGAAAGGGAAGGAGGAAGGGAGATTCTCCGCATGGCTGCTTGGTTGTTG
ATGTTTTTGACTGAATCTGCACACAAACTTTTCTTATTCCTCTCCCTCAG
AGAACGTCTGCATGACCGTGTCCTCAAGCCCGAGCTTATCAACCGTCCGT
TTCTTTTCTTGGACGATAACGGCCGCCTGGTGGAGTCCAAGGGAAGGGAC
CGAGAGAAGGACAAGGAGCGGAAGGCAGCGCTTAAGGCGGCAGCGCGGCG
GGAAGGAGGGAGGGAGGGAGGGAGGGAAGCAGGGAGGGATCGACGGATGG
GGACGGGGAATGGCGGAGGAGGTTGGCGGGGGAGGGAGGGAGGGAGGGAG
AGGAGGGGGAGGGGGTGGTCACCTCCGGGGAGGAGGACGGGACGATCCAG
GTCACCTTTGCGGCGAGGACGCTCTCGGTCTTTTGAACGGTACGTCCTTC
TCTCCCTTCTTCCCTCCCTTCCTCTTCTTTTCCCTGTTTCTTTCTTCGGG
CTGTTCAAAGGCACCAAGCAGTCACTCGCCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTTTTGTCCTTCTTTTTCCCCAGCGGTGA
ATTCAAGCGCCAAAATACCGCACACCTGTCACTTATTCCTCCCTCCCTCC
CTCCCTCCCTCCCTTCTTCGCGCCTTTTTCCCCCTATCTCTTTTCATGCA
GGCAGGAAATCCGGCGGTTGGAGGAGGAGCGTTACCGGCTGGAGGAGGAG
AGGCGACGCTTGGAGGAGGAGCGACGACGATGGGCGTGGGAAAGGGAAGG
AGGCGGGAAGGGGAGAGGGAGGGAGGGAGGGAGGTGGATGGAGGGAGGGG
ATCGGTGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGATGGCGG
GAGGGGGGAGAGAGGCTGCGTGGGGCAGTGGCAGTGGTGGCGGCGAGGGC
GGCAGGGAGGAGCCGAAGCAGGGAGAGGGAGAGGGGATGGGAGAGGGAGC
AGCAGCAGCACTATCATCATCACCATCAGGCCGCGTCTCATCATCTTCAC
CAGGGGAGGTGGTAGGGAGGGGAGCGGAGGGAGGGCAGGACGGACGAAGG
GCAGGGGAGAGGAGGAAGGGAGGGAGGGAGGAAGGGAGGGAGGATTCGAA
GAGGAGCAGGGGCCGGGCATTCCGAGAAGAAATATAATTTATAAGAGGAG
CAAGAGGAGGAAAAGGAAGGAAGGATGGCAAGGAGAGGAGGAGAAGAAGA
AAGAGAGGAAGGAAAACAGAAGAAAAAAAGCATGATGGTGATAACGAAGA
AAGAGAAGAAGGAAGAGAACAAAAACACTGGAACAAGAGAAGAGGATGGT
AAGGGGAACGAACGAAAGTAAGGAACCGCGGAA back to topCoding sequence (CDS) from alignment at chr4:1433202..1435634- >NO04G05140.1 ID=NO04G05140.1|Name=NO04G05140.1|organism=Nannochloropsis oceanica|type=CDS|length=1290bp|location=Sequence derived from alignment at chr4:1433202..1435634- (Nannochloropsis oceanica) ATGCCCTCTCTGCCTCCCGCCTCGCCTCCAGACGTCCAACTCTCCCCAGC TCGTGCGAAGGAGGGCCCGACCGAAGTCGAAGACATGCCAGTGGCGGCCA AGTCGGACGAAAAAGTTGGAGTTTCGCCTTCCAGTTCGTCCGCTCCCCTG AGCTACGACCACATGGATGAGACCGGGTTCAAGGACAGGCGAAGCAACGA GGAGGATGATGGGGAGGACGATGAGGAGGAGGAAGATGGGAAGAAAAGCG CCCGTAGGGCGCGTCTCAAGGCGGAGGGTGGGGGGGGAGACGAGATCGCG GAGGGGGAGGATGCCGCAATGGAGGAGGAGAAGGAAGGCGGGGAAGGACA GGAACGAGAGGAGCAGCAGCAGGGCAAGAAGGAGGTGAATGATTGGACTT ACGTGCACATATCGAACCTTCGCTTAAAAACCACAGAGAGTGAGTTGGAA GCACTCTTCTCCTCCGTCGGTCCCCTCCTCTTGTGCTACATTCGGCCTAA GCGCAGCGACCGGAGTGAGAGTCTCACGGGACTAGTCAGGTTTGAGAAGA AGGAGGATGCCGCGGCGGCCGTTACGAAGCTGTGCGGAGAACGTCTGCAT GACCGTGTCCTCAAGCCCGAGCTTATCAACCGTCCGTTTCTTTTCTTGGA CGATAACGGCCGCCTGGTGGAGTCCAAGGGAAGGGACCGAGAGAAGGACA AGGAGCGGAAGGCAGCGCTTAAGGCGGCAGCGCGGCGGGAAGGAGGGAGG GAGGGAGGGAGGGAAGCAGGGAGGGATCGACGGATGGGGACGGGGAATGG CGGAGGAGGTTGGCGGGGGAGGGAGGGAGGGAGGGAGAGGAGGGGGAGGG GGTGGTCACCTCCGGGGAGGAGGACGGGACGATCCAGGTCACCTTTGCGG CGAGGACGCTCTCGGTCTTTTGAACGGCAGGAAATCCGGCGGTTGGAGGA GGAGCGTTACCGGCTGGAGGAGGAGAGGCGACGCTTGGAGGAGGAGCGAC GACGATGGGCGTGGGAAAGGGAAGGAGGCGGGAAGGGGAGAGGGAGGGAG GGAGGGAGGTGGATGGAGGGAGGGGATCGGTGGGAGGGAGGGAGGGAGGG AGGGAGGGAGGGAGGGGGATGGCGGGAGGGGGGAGAGAGGCTGCGTGGGG CAGTGGCAGTGGTGGCGGCGAGGGCGGCAGGGAGGAGCCGAAGCAGGGAG AGGGAGAGGGGATGGGAGAGGGAGCAGCAGCAGCACTATCATCATCACCA TCAGGCCGCGTCTCATCATCTTCACCAGGGGAGGTGGTAG back to top
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