NO04G04480, NO04G04480 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO04G04480
Unique Name	NO04G04480
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3786
Alignment location	chr4:1217319..1221104 -

Link to JBrowse

Properties


Property Name	Value
Description	Epimerase 4-reductase

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr4	genome	chr4:1217319..1221104 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036291	NAD(P)-bd_dom_sf
IPR029903	RmlD-like-bd

Homology

[Close]

BLAST of NO04G04480 vs. NCBI_GenBank
Match: EWM28830.1 (epimerase 4-reductase [Nannochloropsis gaditana])

HSP 1 Score: 597.0 bits (1538), Expect = 3.200e-167
Identity = 283/310 (91.29%), Postives = 297/310 (95.81%), Query Frame = 0

Query:    1 MSEEKYLIFGKNGWIGGKLIDLLKQQGKTVVLGQSRLENREALFAELDDVKPTHVLDAAGVTGRPNIDWCETHQVETIRTNVIGTLNLAEGCHLKGIHMTLYATGCIFEYDEKHPIGGPGFTEEDSPNFFGSFYSKTKAYMEDMLKSYKNVCILRVRMPISDDLNPRNFVTKIVSYDRVVDVPNSMTVLTDLLPISLIMSQRKLTGIYNFTNPGAISHNQILTLYKKHVDPSYTWQNFTIEEQNKILAAKRSNNELDTTKFCAALPDIQIPDIHAACEGVFKRMKVNLEAEGVWPDKLPKRTNHLAPPSS 311
            M+EEKYLIFGKNGWIGGKLI+LL+ QGKTVVL Q+RLENRE+LFAELD VKPTHVLDAAGVTGRPNIDWCETHQVETIRTNVIGTLNLAE CHLKGIHMTLYATGCIFEYDEKHPIGGPGFTEEDSPNFFGSFYSKTKAYMEDMLKSY NVCILRVRMPISDDLN RNFVTKIV YD+VV+VPNSMTVLTDLLPISL+M+ RKLTGIYNFTNPGAISHNQIL LYKKHVDPSYTW+NFTI+EQNKILAAKRSNNELDTTKFCAALPD+ IPDIH ACE VF+RMKVNLEAEG+WPDKLPKRTN LAPPSS
Sbjct:    1 MAEEKYLIFGKNGWIGGKLIELLQAQGKTVVLAQTRLENRESLFAELDAVKPTHVLDAAGVTGRPNIDWCETHQVETIRTNVIGTLNLAEACHLKGIHMTLYATGCIFEYDEKHPIGGPGFTEEDSPNFFGSFYSKTKAYMEDMLKSYNNVCILRVRMPISDDLNSRNFVTKIVKYDKVVNVPNSMTVLTDLLPISLLMAARKLTGIYNFTNPGAISHNQILALYKKHVDPSYTWENFTIDEQNKILAAKRSNNELDTTKFCAALPDVHIPDIHEACEKVFQRMKVNLEAEGIWPDKLPKRTNRLAPPSS 310

[Close]

BLAST of NO04G04480 vs. NCBI_GenBank
Match: CBN77585.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 445.3 bits (1144), Expect = 1.600e-121
Identity = 204/302 (67.55%), Postives = 253/302 (83.77%), Query Frame = 0

Query:    1 MSEEKYLIFGKNGWIGGKLIDLLKQQGKTVVLGQSRLENREALFAELDDVKPTHVLDAAGVTGRPNIDWCETHQVETIRTNVIGTLNLAEGCHLKGIHMTLYATGCIFEYDEKHPIGGPGFTEEDSPNFFGSFYSKTKAYMEDMLKSYKNVCILRVRMPISDDLNPRNFVTKIVSYDRVVDVPNSMTVLTDLLPISLIMSQRKLTGIYNFTNPGAISHNQILTLYKKHVDPSYTWQNFTIEEQNKILAAKRSNNELDTTKFCAALPDIQIPDIHAACEGVFKRMKVNLEAEGVWPDKLPKRT 303
            MS++ YL++GK GW+GGKL  LL++QGKTV L  SRLENRE++  EL+ +KPTHVL+AAGVTGRPN+DWCE+H+ ETIR NVIGTLNLA+ C  K IH T+YATGCI+EYD +H IGG GF E D+PNF  SFYS TK  +E+ML+ + NVC+LRVRMPISDDL+PRNFVTKIV YD+VV++PNSMTVLTDLLP+SL M+ +KL G+YNF NPGAISHN+IL +YK+++DPSYT+ NFT+EEQ+KIL A RSNN LD +K   ALP+++I +IH A +GVFKRMK NL AEG+ PDKLPKR+
Sbjct:    1 MSDQVYLLYGKTGWLGGKLTTLLREQGKTVHLADSRLENRESVLKELETIKPTHVLNAAGVTGRPNVDWCESHRPETIRANVIGTLNLADLCSSKSIHCTIYATGCIYEYDAEHTIGGKGFLESDAPNFKASFYSDTKGMVENMLRVFPNVCVLRVRMPISDDLSPRNFVTKIVKYDKVVNIPNSMTVLTDLLPVSLAMADKKLEGVYNFCNPGAISHNEILDMYKEYIDPSYTYTNFTVEEQDKILVAGRSNNTLDVSKMVNALPEMEIKEIHVAMQGVFKRMKENLTAEGIIPDKLPKRS 302

[Close]

BLAST of NO04G04480 vs. NCBI_GenBank
Match: GAX26254.1 (3,5-epimerase/4-reductase [Fistulifera solaris])

HSP 1 Score: 404.1 bits (1037), Expect = 4.000e-109
Identity = 196/302 (64.90%), Postives = 238/302 (78.81%), Query Frame = 0

Query:    5 KYLIF-GKNGWIGGKLIDLLKQQGKTVVLGQSRLENREALFAELDDVKPTHVLDAAGVTGRPNIDWCETHQVETIRTNVIGTLNLAEGCHLKGIHMTLYATGCIFEYDEKHPIG-GPGFTEEDSPNFFGSFYSKTKAYMEDMLKSYKNVCILRVRMPISDDLNPRNFVTKIVSYDRVVDVPNSMTVLTDLLPISLIMSQRKLTGIYNFTNPGAISHNQILTLYKKHVDPSYTWQNFTIEEQNKILAAKRSNNELDTTKFCAALPDIQIPDIHAACEGVFKRMKVNLEAEGVWPDKLPKRTNH 305
            K LIF GK GWIGGK+  L K+QG  V    SR+ENREA+ AELD ++P+HVL +AG+TGRPNIDWCE+H+ ETIRTNVIGTLN+A+ C+ +GIH T+YATGCIF YD  HP+G G GFTEED PNF GSFYS+TK+Y+E +LK Y    ILRVRMPISDDL+ R+FVTKI  Y++VV++PNSMTVLT+LLP SL M+Q+ LTG+YNFTNPG ISHNQ+L LYKK++DP + + NFTIEEQN+IL A RSNNELDTTK       I+I DI  A +  F+RMK NLEAEG+ PD LP+   H
Sbjct:    3 KVLIFGGKTGWIGGKMYTLCKEQGIEVYNADSRIENREAVAAELDRIQPSHVLMSAGITGRPNIDWCESHRPETIRTNVIGTLNVADLCNERGIHCTVYATGCIFSYDAAHPLGSGIGFTEEDKPNFTGSFYSETKSYVEPLLKQYPTCMILRVRMPISDDLSSRSFVTKIAKYEKVVNIPNSMTVLTELLPASLKMAQKGLTGVYNFTNPGVISHNQVLDLYKKYIDPDFQYSNFTIEEQNEILKAPRSNNELDTTKLLRDTEGIEINDILTAMDLCFQRMKKNLEAEGILPDNLPEEFKH 304

[Close]

BLAST of NO04G04480 vs. NCBI_GenBank
Match: GAX29474.1 (3,5-epimerase/4-reductase [Fistulifera solaris])

HSP 1 Score: 400.6 bits (1028), Expect = 4.500e-108
Identity = 195/302 (64.57%), Postives = 236/302 (78.15%), Query Frame = 0

Query:    5 KYLIF-GKNGWIGGKLIDLLKQQGKTVVLGQSRLENREALFAELDDVKPTHVLDAAGVTGRPNIDWCETHQVETIRTNVIGTLNLAEGCHLKGIHMTLYATGCIFEYDEKHPIG-GPGFTEEDSPNFFGSFYSKTKAYMEDMLKSYKNVCILRVRMPISDDLNPRNFVTKIVSYDRVVDVPNSMTVLTDLLPISLIMSQRKLTGIYNFTNPGAISHNQILTLYKKHVDPSYTWQNFTIEEQNKILAAKRSNNELDTTKFCAALPDIQIPDIHAACEGVFKRMKVNLEAEGVWPDKLPKRTNH 305
            K LI+ GK GWIGGK+  L K+ G  V    SR+ENREA+ AELD ++P+HVL +AG+TGRPNIDWCE H+ ETIRTNVIGTLN+A+ C+ +GIH T+YATGCI+ YD  HP+G G GFTEED PNF GSFYS+TK+Y+E +LK Y    ILRVRMPISDDL+ R+FVTKI  Y++VV++PNSMTVLT+LLP SL M+Q+ LTGIYNFTNPG ISHNQ+L LYKK++DP + + NFTIEEQN+IL A RSNNELDTTK       I+I DI  A +  F+RMK NLEAEG+ PD LPK   H
Sbjct:    3 KVLIYGGKTGWIGGKMYTLCKEHGIEVYNADSRIENREAVAAELDRIQPSHVLMSAGITGRPNIDWCEDHRPETIRTNVIGTLNVADLCNERGIHCTVYATGCIYTYDAAHPLGSGIGFTEEDKPNFTGSFYSETKSYVEPLLKQYPTCMILRVRMPISDDLSSRSFVTKIAKYEKVVNIPNSMTVLTELLPASLKMAQKGLTGIYNFTNPGVISHNQVLDLYKKYIDPDFQYSNFTIEEQNEILKAPRSNNELDTTKLLRDTEGIEINDILTAMDLCFQRMKKNLEAEGILPDNLPKEFKH 304

[Close]

BLAST of NO04G04480 vs. NCBI_GenBank
Match: XP_009039633.1 (hypothetical protein AURANDRAFT_38303 [Aureococcus anophagefferens] >EGB05795.1 hypothetical protein AURANDRAFT_38303 [Aureococcus anophagefferens])

HSP 1 Score: 397.9 bits (1021), Expect = 2.900e-107
Identity = 191/297 (64.31%), Postives = 235/297 (79.12%), Query Frame = 0

Query:    3 EEKYLIFGKNGWIGGKLIDLLKQQGKTVVLGQSRLENREALFAELDDVKPTHVLDAAGVTGRPNIDWCETHQVETIRTNVIGTLNLAEGCHLKGIHMTLYATGCIFEYDEKHPIGG---PGFTEEDSPNFFGSFYSKTKAYMEDMLKSY-KNVCILRVRMPISDDLNPRNFVTKIVSYDRVVDVPNSMTVLTDLLPISLIMSQRKLTGIYNFTNPGAISHNQILTLYKKHVDPSYTWQNFTIEEQNKILAAKRSNNELDTTKFCAALPDIQIPDIHAACEGVFKRMKVNLEAEGVWP 296
            + K+L++GKNGWIGG LI+L +  G  VVLG +RLENREA+ AE++ V+PT VL+AAGVTGRPN+DWCE ++   IRTNVIG LNLA+ C  K +H TLYATGCIFEYD  HP+GG     FTEED  NF GS+YS TK ++E+ML++Y  ++ +LRVRMPISDDL+PRNF+TKI  Y++VVD+PNSMTVL DLLP SL +S+R+L GIYNF NPGAISHNQ L  YKK+VDP +TW NFT+EEQNKILAAKRSNNELD +K   ALPD++IPDIH A     +R K NL+A+G  P
Sbjct:   30 KHKFLLYGKNGWIGGMLIELARANGDEVVLGDARLENREAVLAEIEKVRPTRVLNAAGVTGRPNVDWCEFNKQTVIRTNVIGCLNLADICWQKKLHCTLYATGCIFEYDAAHPLGGGVETAFTEEDRANFDGSYYSMTKGFVEEMLRAYLDHLTVLRVRMPISDDLSPRNFITKISKYEKVVDIPNSMTVLHDLLPCSLELSRRELAGIYNFCNPGAISHNQCLEQYKKYVDPDFTWSNFTVEEQNKILAAKRSNNELDCSKLVNALPDMRIPDIHTAMAECMQRTKKNLDAQGWKP 326

[Close]

BLAST of NO04G04480 vs. NCBI_GenBank
Match: OEU12937.1 (putative bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 391.7 bits (1005), Expect = 2.100e-105
Identity = 195/304 (64.14%), Postives = 242/304 (79.61%), Query Frame = 0

Query:    4 EKYLIF-GKNGWIGGKLIDLL--KQQGKTVVLGQSRLENREALFAELDDVKPTHVLDAAGVTGRPNIDWCETHQVETIRTNVIGTLNLAEGCHLKGIHMTLYATGCIFEYDEKHPIG-GPGFTEEDSPNFFGSFYSKTKAYMEDMLKSYKNVCILRVRMPISDDLNPRNFVTKIVSYDRVVDVPNSMTVLTDLLPISLIMSQRKLTGIYNFTNPGAISHNQILTLYKKHVDPSYTWQNFTIEEQNKILAAKRSNNELDTTKFCAALPD-IQIPDIHAACEGVFKRMKVNLEAE--GVWPDKLPK 301
            ++ L+F GK GWIG  + +L+  +++G  V    SR++NREA+ AELD++KPTHV +AAG+TGRPNIDWCETH+ ETIRTNVIGTLNLA+ C  + IH T+YATGCIF YDEKHP G G GF+EED+PNF GSFYS+TK YME MLK Y N  ILRVRMPISDDL  R+FVTKI+ Y+RVV++PNSMT+LT++LP SL M+++ LTG+YNFTNPG ISHN++L LY K +DP+YT+ NFT+EEQ+KILAA RSNNELDTTK    +PD I+I +I  A E  F+RMK+NLE E  G  PD LPK
Sbjct:   11 KRVLVFGGKTGWIGNLMCELMEGEEKGVEVFRANSRIQNREAVAAELDEIKPTHVFNAAGITGRPNIDWCETHKPETIRTNVIGTLNLADLCLDRNIHCTVYATGCIFAYDEKHPEGSGIGFSEEDTPNFDGSFYSQTKGYMEPMLKEYSNCLILRVRMPISDDLIHRSFVTKILKYERVVNIPNSMTILTEMLPASLAMAKKGLTGVYNFTNPGVISHNEVLDLYTKIIDPTYTYNNFTLEEQSKILAAARSNNELDTTKLLRDMPDGIEINEIKKAYELCFERMKINLEKEHGGPVPDCLPK 314

[Close]

BLAST of NO04G04480 vs. NCBI_GenBank
Match: XP_016609714.1 (hypothetical protein SPPG_03470 [Spizellomyces punctatus DAOM BR117] >KND01675.1 hypothetical protein SPPG_03470 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 391.3 bits (1004), Expect = 2.700e-105
Identity = 187/291 (64.26%), Postives = 229/291 (78.69%), Query Frame = 0

Query:    2 SEEKYLIFGKNGWIGGKLIDLLKQQGKTVVLGQSRLENREALFAELDDVKPTHVLDAAGVTGRPNIDWCETHQVETIRTNVIGTLNLAEGCHLKGIHMTLYATGCIFEYDEKHPIGGPGFTEEDSPNFFGSFYSKTKAYMEDMLKSYKNVCILRVRMPISDDLNPRNFVTKIVSYDRVVDVPNSMTVLTDLLPISLIMSQRKLTGIYNFTNPGAISHNQILTLYKKHVDPSYTWQNFTIEEQNKILAAKRSNNELDTTKFCAALP--DIQIPDIHAACEGVFKRMKVNLEA 291
            S+E+YLIFG NGWI G L +LL++QGK V     RLE REA+  ELD  KPT V + AGVTGRPN+DWCE ++  TIR+NVIGTLNLA+ C L+GIHMT +ATGCI+ YDEKH   G G+TEED PNF GS+YS TKA +E M+K+Y NV  LR+RMP+SDDLNPRNFVTKI  Y+RVVDVPNS T+L DLLP S++M++ KLTG++NFTNPGAISHN++L LYKKHVDP++TW+NFT+EEQ+KIL A RSN ELDTTK    L    I +P+IH A +  F+RM  NL+A
Sbjct:    8 SQERYLIFGANGWIAGLLKELLEKQGKEVKGTLVRLEEREAVCKELDAYKPTRVFNCAGVTGRPNVDWCEDNKQATIRSNVIGTLNLADCCFLRGIHMTNFATGCIYTYDEKHKEHGVGYTEEDEPNFAGSYYSFTKAMVEKMIKAYDNVLTLRLRMPVSDDLNPRNFVTKITKYERVVDVPNSNTILHDLLPASIVMAENKLTGVFNFTNPGAISHNEVLALYKKHVDPNFTWKNFTVEEQSKILKAGRSNCELDTTKLTTTLAKFGITVPEIHEAYDACFQRMAANLKA 298

[Close]

BLAST of NO04G04480 vs. NCBI_GenBank
Match: XP_002184144.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44322.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 382.9 bits (982), Expect = 9.600e-103
Identity = 187/301 (62.13%), Postives = 232/301 (77.08%), Query Frame = 0

Query:    7 LIFGK-NGWIGGKLIDLLKQQGKTVVLGQSRLENREALFAELDDVKPTHVLDAAGVTGRPNIDWCETHQVETIRTNVIGTLNLAEGCHLKGIHMTLYATGCIFEYDEKHPIG-GPGFTEEDSPNFFGSFYSKTKAYMEDMLKSYKNVCILRVRMPISDDLNPRNFVTKIVSYDRVVDVPNSMTVLTDLLPISLIMSQRKLTGIYNFTNPGAISHNQILTLYKKHVDPSYTWQNFTIEEQNKILAAKRSNNELDTTKFCAALPD-IQIPDIHAACEGVFKRMKVNLEAEGVWPDKLPKRTNH 305
            LIFG   GWIG  +  L + +G  V   +SR+ENR  + AELD +KP+HVL +AG+TGRPNIDWCE H+ ET+R NVIGTLN+A+ C+ +GIH T+YATGCIF+YD+ HP+G G GFTEED PNF GSFYSKTK +ME MLK Y N  ILRVRMP+SDDL  RNFVTKI  Y++VVDVPNSMT+L ++LP SL M+Q+ LTG+YNFTNPG ISHNQ+L L+KK++DP++T+ NF++EEQ KIL A RSNNELDTTK    +P+ ++I DI  A +  F+RMKVNLEA G  PD LP    H
Sbjct:    5 LIFGGITGWIGQMMNQLCQDKGIAVHNAESRIENRGDVEAELDRIKPSHVLMSAGITGRPNIDWCEDHKPETMRVNVIGTLNVADVCYTRGIHCTVYATGCIFKYDDAHPLGSGIGFTEEDVPNFDGSFYSKTKGFMEPMLKEYPNCLILRVRMPVSDDLFHRNFVTKIAKYEKVVDVPNSMTILHEMLPASLAMAQKGLTGVYNFTNPGVISHNQVLDLFKKYIDPNFTYSNFSVEEQAKILKAARSNNELDTTKLMRDVPEGVEINDILTAFDKCFQRMKVNLEAMGWLPDNLPAEFTH 305

[Close]

BLAST of NO04G04480 vs. NCBI_GenBank
Match: XP_002290334.1 (hypothetical protein THAPSDRAFT_40788 [Thalassiosira pseudonana CCMP1335] >EED92086.1 hypothetical protein THAPSDRAFT_40788 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 382.9 bits (982), Expect = 9.600e-103
Identity = 194/302 (64.24%), Postives = 234/302 (77.48%), Query Frame = 0

Query:    5 KYLIF-GKNGWIGGKLIDLL--KQQGKTVVLGQSRLENREALFAELDDVKPTHVLDAAGVTGRPNIDWCETHQVETIRTNVIGTLNLAEGCHLKGIHMTLYATGCIFEYDEKHPIG-GPGFTEEDSPNFFGSFYSKTKAYMEDMLKSYKNVCILRVRMPISDDLNPRNFVTKIVSYDRVVDVPNSMTVLTDLLPISLIMSQRKLTGIYNFTNPGAISHNQILTLYKKHVDPSYTWQNFTIEEQNKILAAKRSNNELDTTKFCAALP-DIQIPDIHAACEGVFKRMKVNLEAE-GVWPDKLPK 301
            K LI+ GK GWIGGK+  L+  K    TVVL  +R+ENR  + AELDD KP+HV  AAG+TGRPNIDWCE H+ ETIRTNVIGTLNLA+ C+ +GIH T+YATGCIF+YD+ HP+G G GFTEED PNF  SFYS+TK YME MLK Y +  ILRVRMPISDDL+ RNF+TKIV Y+RVV++PNSMTVLT++LP SL M+ + LTG+YNF NPG ISHN+ L LY K++DP+YT++NFT+EEQ+KIL A RSNNELD TK    LP DI++ DI  A E   +RM+VNL  E G  PD LPK
Sbjct:   10 KALIYGGKTGWIGGKMAALIAAKHPSVTVVLASARIENRADVAAELDDEKPSHVFMAAGITGRPNIDWCEDHKPETIRTNVIGTLNLADLCNDRGIHCTVYATGCIFKYDDAHPLGSGIGFTEEDKPNFDESFYSQTKGYMEPMLKCYPSCMILRVRMPISDDLSHRNFITKIVKYERVVNIPNSMTVLTEMLPASLAMATKGLTGVYNFCNPGVISHNECLDLYTKYIDPTYTYKNFTLEEQSKILKAGRSNNELDATKLLRDLPEDIKLNDIKTAVELCMQRMRVNLTEEFGELPDALPK 311

[Close]

BLAST of NO04G04480 vs. NCBI_GenBank
Match: XP_005826217.1 (hypothetical protein GUITHDRAFT_89166 [Guillardia theta CCMP2712] >EKX39237.1 hypothetical protein GUITHDRAFT_89166 [Guillardia theta CCMP2712])

HSP 1 Score: 381.3 bits (978), Expect = 2.800e-102
Identity = 184/302 (60.93%), Postives = 229/302 (75.83%), Query Frame = 0

Query:    2 SEEKYLIFGKNGWIGGKLIDLLKQQGKTVVLGQSRLENREALFAELDDVKPTHVLDAAGVTGRPNIDWCETHQVETIRTNVIGTLNLAEGCHLKGIHMTLYATGCIFEYDEKHPIGGPGFTEEDSPNFFGSFYSKTKAYMEDMLKSYKNVCILRVRMPISDDLNPRNFVTKIVSYDRVVDVPNSMTVLTDLLPISLIMSQRKLTGIYNFTNPGAISHNQILTLYKKHVDPSYTWQNFTIEEQNKILAAKRSNNELDTTKF--CAALPDIQIPDIHAACEGVFKRMKVNLEAEGVWPDKLPKR 302
            S E YL++G  GWIGG L  LL+  GK VV+ ++RL+NRE +  ELD+ +PT VL AAG+TGRPN+DWCET++  T+RTNVIGTL + + C  +GIH TL+ATGCI+EYD+ HPIGG GFTEED PN+ GSFYSKTKA +E++LK Y NV ILR+RMPISDDL+ R+FVTKI  Y +VVD+PNSMTVL +LLP+SL MS+ KLTGIYNF NPGAISHN++L +YK+ VDP++ W NFT+EEQ KIL A RSNN L+T K    A      IPDI  A     ++ K  L AEG +PD LPK+
Sbjct:    3 SNEVYLLWGSTGWIGGILQGLLRDGGKKVVVAKARLQNREEVEKELDEHQPTRVLIAAGITGRPNVDWCETNKEATVRTNVIGTLGIVDACWQRGIHATLFATGCIYEYDKDHPIGGRGFTEEDRPNYDGSFYSKTKAIVEELLKVYSNVLILRLRMPISDDLSERSFVTKIAKYHKVVDIPNSMTVLNELLPLSLSMSEAKLTGIYNFCNPGAISHNEVLQIYKEEVDPNFEWSNFTVEEQAKILGAGRSNNFLETKKLEDEAIKLGHSIPDIKTAVRQALRKAKAKLVAEGRFPDGLPKK 304

The following BLAST results are available for this feature:

BLAST of NO04G04480 vs. NCBI_GenBank

BLAST of NO04G04480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM28830.1	3.200e-167	91.29	epimerase 4-reductase [Nannochloropsis gaditana]	[more]
CBN77585.1	1.600e-121	67.55	conserved unknown protein [Ectocarpus siliculosus]	[more]
GAX26254.1	4.000e-109	64.90	3,5-epimerase/4-reductase [Fistulifera solaris]	[more]
GAX29474.1	4.500e-108	64.57	3,5-epimerase/4-reductase [Fistulifera solaris]	[more]
XP_009039633.1	2.900e-107	64.31	hypothetical protein AURANDRAFT_38303 [Aureococcus...	[more]
OEU12937.1	2.100e-105	64.14	putative bifunctional dTDP-4-dehydrorhamnose 3,5-e...	[more]
XP_016609714.1	2.700e-105	64.26	hypothetical protein SPPG_03470 [Spizellomyces pun...	[more]
XP_002184144.1	9.600e-103	62.13	predicted protein [Phaeodactylum tricornutum CCAP ...	[more]
XP_002290334.1	9.600e-103	64.24	hypothetical protein THAPSDRAFT_40788 [Thalassiosi...	[more]
XP_005826217.1	2.800e-102	60.93	hypothetical protein GUITHDRAFT_89166 [Guillardia ...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL082	nonsL082	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
nonsL080	nonsL080	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR058	ncniR058	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR110	ngnoR110	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK009341	NSK009341	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO04G04480.1	NO04G04480.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|579572	gene_2235	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO04G04480.1	NO04G04480.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO04G04480 ID=NO04G04480|Name=NO04G04480|organism=Nannochloropsis oceanica|type=gene|length=3786bp
TAAAAAATCTAGAACAAAGCACCATAAGGCACCCAAAATGATGCGGCTAT
GTGCGAAAAAGCTGCGCACAGGGAAATGGAAGAAACGGCAACCTGCGAAG
CGAAGGGAGAAGACGTTTGATGCCCTCCGAGTGTCCAGCGCACGCGAACG
ACTCTTCGGGGACTAGCCGTTGAGAGCAAAGCATGAGTAAGACGTAGTTC
CTTAAGTTAGCGTGTGCAGCGCACCTTTGCCGACACCTTTTCTTGGTGTC
ACGTTGGAGCCATCCCAGAGCACCAGCGTCATCGCTCACTTTCGCTCTCA
TTCAAAAAGAAACTGCATCACCAGGCCCTGACTCCTTCCTCTTCACACCA
CCCACCATGTCCACACAGACACACGCCCACTTCGTCTACTGCTAAGCGTT
AAGCACTTATGTCGGAAGAGgtatgtgcgggatgtggtattttgggtcag
gttctgtgggccgtgtccctctcatcttgatttgtcccatcttcttcatc
cacgcgagtaactactatcacaacgcactcgctcactctctgcccatacc
ccacgccgagcagAAGTACTTGATCTTCGGGAAGAACGGATGGATCGGGG
GAAAGCTCATCGACCTGCTTAAGCAGCAAGGCAAAACGGTGGTGTTGGGC
CAGTCCCGCCTCGAGAACCGCGAGGCGCTCTTCGCAGAGCTGGACGACGT
TAAGCCGACCCACGTCTTGGACGCAGCAGGCGTGACGGGCCGCCCGAATA
TTGATTGGTGCGAGACGCACCAGGTGGAAACGATTCGTACGAATGTCATA
GGAACGTTGAATCTGGCGGAGGGATGCCATCTGAAGGGGATTCACATGAC
GTTGTATGCCACGGGATGTATTTTTGAGTACGACGAGAAGCACCCTATCG
GCGGCCCGGGTTTCACGGAGGAGGACTCGCCTAACTTCTTCGGGTCATTC
TATAGTAAGACTAAGGCCTATATGGAGGACATGTTGAAGAGCTACAAGAA
CGTGTGCATCTTGCGGGTGCGCATGCCCATCTCTGATGACCTCAATCCCC
GTAATTTTGTCACCAAAATTGTGAGCTACGACCGCGTGGTGGACGTACCT
AACTCCATGACGGTACTGACGGACCTCTTGCCAATCTCCTTAATTATGAG
CCAGCGCAAGCTCACAGgtacgtggggagggaggaagggagggaaggagg
gagggatagagggaaggaggggacttggaagatgtgagggtgtatggctc
actccccctctctccctccctctcttcctctctctcaagGCATCTACAAT
TTCACCAACCCCGGCGCCATCTCTCACAACCAAATTCTGACCCTGTACAA
GAAGCATGTCGACCCGTCCTACACCTGGCAGAATTTCACGgtacgtttct
ccccccctccccctctccctccctccctcccccccctcggcttttacttc
tcctgacccctccctcctccctcttcctcccctccctccttcccctcctc
cttcagATCGAGGAACAAAACAAGATTCTTGCCGCCAAGCGCTCCAACAA
TGAGCTGGACACGACCAAGTTCTGTGCCGCGCTTCCCGATATTCAAATTC
CAGATATCCATGCAGCCTGCGAAGGGgtgcgtacccctccctccctccct
tcctccctccccgtttccctcctctccttgggcgccgaatgaccgcatga
ccaagtattgtgccatgctacccgggtataaaggttcttgacagtcatct
aagagccgtacaccgggacaaaggagggcagaaaccagggagggaatgag
gggagaaggagcagtagaaagcatatgctattttaatctcccattgcaac
aagccctgtgattgtcactcctcacgaccctccctccctccctctcgccc
tctctccctctctccgtcagGTCTTCAAGCGCATGAAGGTCAATTTGGAG
GCGGAGGGCGTGTGGCCCGATAAGCTGCCTAAACGCACCAACCACCTGGC
ACCCCCCTCCTCCTAAGCAAGCGTCTTTATCTCTCTTGCTACCCTCATTC
CATTCCTTCTTGATTCCTTCCCCTCCGCGCTCCCCTTGTGGGAAAGAGAG
GTATGAGGAGGAGGAAGGGAGGGATGGAGGGAGACTCACAATGTATGCTA
TTTACTTGATGTACTTTGGAAAGTGTTGAAGCGTATCTTATGGTAGGACG
AATGAAATGGAGGCGAATGCGAGGATGGAAGGAGGAGAGGGAAGCAAAAG
TAGAAGAAGTAGAAGCAAAAAAGGAAGAAGAAAAAGAATACAGAAGAGGA
AGATGAGGAGGAAGAGGAGGTGTCGTCAGGGACCTGACCCCTCACGCCAA
GCCTTCAAGTCGAATAAAACAGCGATCAATTGAAAGATGATATAAGACAA
ACAGCAGAGGATATTGAATTAGACTCCAATCCCAACGTGCCCTTGCATTC
TCTGGTTACCCCACGGAAAGAATCCAACCCCCCCGACAAGAACGAAAAAG
AACCACGAACACGATGGGAGCACGAAAAGCAGCCGAAGCAATTGCAGCTG
TAGCACCTACAGGATCGCGAAAGGATCGACATAAGCTGTACTAAATTTGA
TTTCAGGTTCCTGATCTCATCCATTTTTCCTTTCTGTTCTCGCCAGAACA
CGTAAAAGCTGCTGCTTCCACTCCCAGTGGTAGAGGGAGGCCAGTGCAGT
CATGTGCCTGTTGCGTATCATTACCAACCATGCGCATCCACCTTCTTTAC
AATACCGTGTCTTCATCATGAAGGACATACATCCACCCTATCCCTCGACA
GAGAGGCTCCATGTCTTCATCCTGAACCCCCCCCCTTTAAACATTAAAGC
TCTCCCCACACCCACACGAGCCCTTCGCGTTTGGATTGTGAAATGTAAAC
TCTCTCGACAGCTCCGTCTCTTCAAAGTCCATTCTCGTGCCGACCACGTG
CATTAATGCAGAGGGCTCCACGAACACAGTCACCCCTCCCACAGTCACCT
CCTCGTCAAATTTCGGCCGGGTCTCGGTGTAGTTCATCGTGTAAGACAAC
CCATTGCAACCCCTCTTTTTCGTGCCCAGACGCACCCCCACCACGCTGGG
GCCTTTAGAGGCGAGGAGCTCTTTGATACGAGCGACGGCCCGATCCGTGA
GCTGGAGGGGGGCTGCGCGGGTGCGACGGGTAGGAGGGTACGAGGGGGAG
GAGTTGGGGGGAGTAGGGCCGGTCGTGCTGCTGTTGCTATTGTCGTCATA
ACGAAGGGATTGAGAGGATGAAGAAGCGGTCGCGGTGGCAGTGGCGGTGT
TTGTTCTGGGTTGCGGGCCGGTGGAAGATGGGAATGATGAAGGTGCTTGG
TGCTCATGTTGCTGGTGCTGCTGGCTCGCCCCAGACATGTTGTCGTGGCT
GATGACGGCGGCCACGGTGGACGCCCAAGCTCTTTGCTGCTGCCCTACTA
TTGTCACCGCTGGTGTTGTCGTGGGTGCTCGGGCCATTGCCAAGGAGGAG
GCGGCAGCGGACGTTGCTGCTAGAGAGGCCATTCCTACAGCGCTCGCGCA
CGCAAGAGACGAAGAGATGGACGAAACTCCCCGTCCTCCTCTCATGCCCT
GCGTTATCACCCTCTGGATCAGCGCCGCGGCGGTGCGGGACGTGGACTTA
GCCATGGCGTGTGAAGCGGTGCGGTGAGGTGGTCTTGGGTATGCCCGTAG
CTAGCTGCTAGTTGGACGAGACGAGATTGTCTGCACTCCTGGTGATATCA
GCAAGCGACTCTGGGGCTGCCTGTCGCGGGGGCTAT

protein sequence of NO04G04480.1

>NO04G04480.1-protein ID=NO04G04480.1-protein|Name=NO04G04480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=311bp
MSEEKYLIFGKNGWIGGKLIDLLKQQGKTVVLGQSRLENREALFAELDDV
KPTHVLDAAGVTGRPNIDWCETHQVETIRTNVIGTLNLAEGCHLKGIHMT
LYATGCIFEYDEKHPIGGPGFTEEDSPNFFGSFYSKTKAYMEDMLKSYKN
VCILRVRMPISDDLNPRNFVTKIVSYDRVVDVPNSMTVLTDLLPISLIMS
QRKLTGIYNFTNPGAISHNQILTLYKKHVDPSYTWQNFTIEEQNKILAAK
RSNNELDTTKFCAALPDIQIPDIHAACEGVFKRMKVNLEAEGVWPDKLPK
RTNHLAPPSS*

Synonyms

Publications