NO04G04230, NO04G04230 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G04230 vs. NCBI_GenBank
Match: EWM28695.1 (retinol retinaldehyde reductase [Nannochloropsis gaditana]) HSP 1 Score: 604.7 bits (1558), Expect = 1.900e-169 Identity = 280/360 (77.78%), Postives = 321/360 (89.17%), Query Frame = 0 Query: 1 MGSFLDFWNNLCHIDLLEEWIWYSYFAGAWLLGPILAFLIVCYDVVSGFFFPVWHIAPSLDKVVFITGCDSGFGKALAIHLAQKGFKVYAACLTAKGAENMTTECAAVQTVLLDVTKADQVQSAADRVDSENPQGLYVLVNNAGIAKSGLIDWFSMSDFRVCMEVNYFGVIAVTKAFLPLVKRRKGRIVVVSSVAGVSCGYPLSTPYSASKHAVELFASALRQEMRPWGIKVSTINPGFHRTEMNMVAVQGLEGCWAKVPPHIQAEYGSSYFEGCKEFVRKHTEEVVFDPVNVVRALEHAVTCTRPRVQYRVGLDAKYGLVWTQIFPLRLGEKIIYALTTNKKMRSIVGLKPVGKAMEAE 361 MG L+FWNNLCHIDLLEEWIWYSYF GAWLLGP +AFLIV YD SGF FP+WH+ PS DK +FITGCD+GFG++LA+ LAQKGF+VYAACLTA G E + EC+ V+T++LDVT +QVQ AA RVD+ENP+GLY LVNNAG+AKSGLIDWF +SDFR CMEVN+FGV++VTKAFLPL+KR KGRIVVVSSVAGVSCGYPLS PYSASKHAVELFAS+LRQE+R WGIKVSTINPGFHRTEMN VAV+GLE CW+KV P IQA+YG SYFEGC++FV+ HTE+VVFDP+NVVRA+EHAVTCTRPR+QYRVGLDAKYGLVWTQIFPLR+GEK+IYALTTNKKMRSIVGL +A +A+ Sbjct: 1 MGGCLEFWNNLCHIDLLEEWIWYSYFTGAWLLGPFMAFLIVVYDFCSGFAFPLWHVEPSRDKAIFITGCDTGFGRSLAVRLAQKGFRVYAACLTANGVEEIKAECSTVETMMLDVTDENQVQEAAARVDAENPEGLYALVNNAGVAKSGLIDWFGLSDFRFCMEVNFFGVVSVTKAFLPLIKRCKGRIVVVSSVAGVSCGYPLSAPYSASKHAVELFASSLRQELRAWGIKVSTINPGFHRTEMNKVAVKGLETCWSKVDPVIQAQYGQSYFEGCRDFVKTHTEDVVFDPINVVRAMEHAVTCTRPRIQYRVGLDAKYGLVWTQIFPLRVGEKLIYALTTNKKMRSIVGLPTAPRAEDAQ 360
BLAST of NO04G04230 vs. NCBI_GenBank
Match: EWM28666.1 (retinol retinaldehyde reductase [Nannochloropsis gaditana]) HSP 1 Score: 405.6 bits (1041), Expect = 1.600e-109 Identity = 191/347 (55.04%), Postives = 255/347 (73.49%), Query Frame = 0 Query: 5 LDFWNNLCHIDLLEEWIWYSYFAGAWLLGPILAFLIVCYDVVSGFFFPVWHIAPSLDKVVFITGCDSGFGKALAIHLAQKGFKVYAACLTAKGAENMTTECAAVQTVLLDVTKADQVQSAADRVDSENPQGLYVLVNNAGIAKSGLIDWFSMSDFRVCMEVNYFGVIAVTKAFLPLVKRRKGRIVVVSSVAGVSCGYPLSTPYSASKHAVELFASALRQEMRPWGIKVSTINPGFHRTEMNMVAVQGLEGCWAKVPPHIQAEYGSSYFEGCKEFVRKHTEEVVFDPVNVVRALEHAVTCTRPRVQYRVGLDAKYGLVWTQIFPLRLGEKIIYALTTNKKMRSIVGLK 352 +++ NN+ HI + E+ +Y++F AW GP+L L+ +D +GFFF ++++ PS DKVV ITGCD+GFGK+LA+ L +KGFKVYA+CLT + A+ + EC A+QT++LDVTK DQV S A R+ + +PQG++ LVNNAG++++GLIDW +MSDFR CMEVNYF V++VTKAFLP +K+ KGRI+++SS AGV+CGYP++ YS+SKHA+ELFASALRQE+R WGI VSTINPGFHRTE+N A L+ + K P IQ EYG Y E + TE DP NV+RA HA+T TRP+VQYRVG+DAK + QIFPLR+GE Y +T MR + G + Sbjct: 4 INWANNVAHIPVFEDMCYYNFFFWAWFWGPLLGALVFLHDATTGFFFSIFYVEPSEDKVVVITGCDTGFGKSLALDLGKKGFKVYASCLTQRSADELKKECDALQTIILDVTKEDQVASVAARISAAHPQGIFALVNNAGVSRAGLIDWLNMSDFRFCMEVNYFSVVSVTKAFLPSLKKSKGRIIMMSSAAGVACGYPVTCAYSSSKHALELFASALRQELRTWGITVSTINPGFHRTEINHNAAGALKATFEKAPREIQEEYGEEYLGATAEATTRFTETQALDPKNVIRAYVHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEICAYYASTTSGMRVVRGAR 350
BLAST of NO04G04230 vs. NCBI_GenBank
Match: EWM25060.1 (serine threonine-protein kinase dclk3 [Nannochloropsis gaditana]) HSP 1 Score: 232.6 bits (592), Expect = 1.900e-57 Identity = 129/338 (38.17%), Postives = 198/338 (58.58%), Query Frame = 0 Query: 5 LDFWNNLCHIDLLEEWIWYSYFAGAWLLGPILAF-LIVCY--DVVSGFFFPVWHIAPSLDKVVFITGCDSGFGKALAIHLAQKGFKVYAACLTAKGAENMTTECA----AVQTVLLDVTKADQVQSAADRVDSENPQGLYVLVNNAGIAKSGLIDWFSMSDFRVCMEVNYFGVIAVTKAFLPLVKRRKGRIVVVSSVAGVSCGYPLSTPYSASKHAVELFASALRQEMRPWGIKVSTINPGFHRTEMNMVAVQGLEGCWAKVPPHIQAEYGSSYFEGCKEFVRKHTEEVVFDPVNVVRALEHAVTCTRPRVQYRVGLDAKYGLVWTQIFPLRLGEKII 336 L+ N++ H+ ++++ W+ Y LLGP+ A L++ + ++SG V + + V ITGCD+GFG LAI L +KG++VYA CLT + T+ A ++ +VL+DVTK + +++ E+P+ L+ +V NAG+ + GL+DW ++ +R MEVN F +IA KA LPL+K KGRIV V+S+AG+ G P + Y+ASKHA E F+++LR E+ WGI+V T+NP FHRT ++ A + ++ + + QAEYG Y ++ T+ +DP +VV L A T PR QY VG DA + L+ P EKI+ Sbjct: 1211 LNLMNDIMHLPIVDDIAWHLYHFVRLLLGPLWALGLLISFLVKLLSGAL--VTRLEQPKGRAVLITGCDTGFGYDLAIALVKKGWRVYAGCLTQAAVAELKTKAAGSAGSMVSVLMDVTKQADIDRVVEQIAKESPKQLFAVVCNAGVGRGGLVDWTPLATYRAIMEVNLFAMIATCKACLPLLKESKGRIVNVTSMAGIFLGAPCMSAYAASKHAAEAFSTSLRFELEGWGIRVVTVNPSFHRTRISTNAAETVKQAYDDLDAKTQAEYGLEYLRAVQKLTSDQTDG-CWDPRHVVNTLVRATTAVSPRTQYIVGADATFCLLPLMNLPTPDIEKIV 1545
BLAST of NO04G04230 vs. NCBI_GenBank
Match: XP_002605545.1 (retinol dehydrogenase, retinaldehyde reductase [Branchiostoma floridae] >EEN61555.1 retinol dehydrogenase, retinaldehyde reductase [Branchiostoma floridae]) HSP 1 Score: 205.3 bits (521), Expect = 3.300e-49 Identity = 117/284 (41.20%), Postives = 169/284 (59.51%), Query Frame = 0 Query: 61 DKVVFITGCDSGFGKALAIHLAQKGFKVYAACLTAKGAENMTTECA-AVQTVLLDVTKADQVQSAADRV-DSENPQGLYVLVNNAGIA--KSGLIDWFSMSDFRVCMEVNYFGVIAVTKAFLPLVKRRKGRIVVVSSVAGVSCGYPLSTPYSASKHAVELFASALRQEMRPWGIKVSTINPGFHRTEM-NMVAVQG-LEGCWAKVPPHIQAEYGSSYFEGCKEFVRKHTEEVVFDPVNVVRALEHAVTCTRPRVQYRVGLDAKYGLVWTQIFPLRLGEKIIYAL 339 DK V ITGCD+GFG LA L Q G +V+A CLT G + C+ +Q + +DV+ +D VQ A V ++ +GL+ LVNNAGIA G +DW + D++ C++VN G+I VTK FLPL+K+ +GR+V VSS AG + PY+ K+ VE F+ LR+ MR +G+KV I PGFHRTE+ N V G L+ W + P + EYG + + K++ + ++ DPV VV A+EHA+ T PR +Y +G DA+ + P LG+ + + L Sbjct: 19 DKTVLITGCDTGFGNLLAKRLDQLGLRVFAGCLTEAGVAELRQSCSERLQPIRMDVSSSDSVQDAFRVVKEAVGSKGLWGLVNNAGIAGVSGGTMDWATKEDYQACLKVNLLGMIDVTKTFLPLLKKSRGRVVNVSSAAG-RMAVQDAGPYTVCKYGVEAFSDCLRRAMRYFGVKVHIIEPGFHRTEITNQEMVLGLLDQIWQRQSPETRTEYGVEFLQASKDY-KVSLGRLMQDPVAVVDAMEHALCATHPRSRYVIGWDARLVAIPMSWLPTDLGDLVGHLL 300
BLAST of NO04G04230 vs. NCBI_GenBank
Match: XP_002597630.1 (retinol dehydrogenase, retinaldehyde reductase [Branchiostoma floridae] >EEN53642.1 retinol dehydrogenase, retinaldehyde reductase [Branchiostoma floridae]) HSP 1 Score: 204.9 bits (520), Expect = 4.300e-49 Identity = 123/312 (39.42%), Postives = 187/312 (59.94%), Query Frame = 0 Query: 35 ILAFLIVCYDVVSGFFFPVWHIAPSLDKVVFITGCDSGFGKALAIHLAQKGFKVYAACLTAKGAENMTTECA-AVQTVLLDVTKADQVQSAADRVD-SENPQGLYVLVNNAGIAKSGL--IDWFSMSDFRVCMEVNYFGVIAVTKAFLPLVKRRKGRIVVVSSVAG-VSCGYPLSTPYSASKHAVELFASALRQEMRPWGIKVSTINPGFHRTEMN--MVAVQGLEGCWAKVPPHIQAEYGSSYFEGCKEFVRKHTEEVVFDPVNVVRALEHAVTCTRPRVQYRVGLDAKYGLVWTQIFPLRLGEKIIYALT 340 ++A L V Y +V ++ +++ DK V ITGCD+GFG LA L Q G +V+A CLT G + C+ +Q + +DVT +D V++A V+ + +GL+ LVNNAGI SG+ ++W +++D++ ++VN G+I VT+ FLPL+KR +GR+V V+SVAG ++ Y TPYS SK VE F+ +LR+ MR +G+KV I P F RT +N V ++ L+ W + P + EYG + + K+ + + DPV VV A+EHA+ TRPR +Y VG DA V P LG+ ++ L+ Sbjct: 9 VIAVLWVTY-LVLNWWLERRYVSQLTDKTVLITGCDTGFGNLLARRLDQLGLRVFAGCLTEAGVAELRQSCSERLQPIRMDVTSSDSVKTAFRVVEKAVGSKGLWGLVNNAGIVGSGVGAMEWSTVADYQAVIDVNLLGMIDVTRTFLPLLKRSRGRVVNVASVAGRLALNY--ITPYSVSKFGVEAFSDSLRRSMRCFGVKVHIIEPSFFRTNINNMEVIIRLLDNIWQRQSPETKKEYGQEFLQATKDVIIAGDGRKL-DPVAVVDAMEHALCATRPRSRYVVGWDAWLVFVPISWLPTELGDLVLRVLS 316
BLAST of NO04G04230 vs. NCBI_GenBank
Match: KXJ19453.1 (17-beta-hydroxysteroid dehydrogenase type 6 [Exaiptasia pallida]) HSP 1 Score: 204.5 bits (519), Expect = 5.600e-49 Identity = 120/289 (41.52%), Postives = 163/289 (56.40%), Query Frame = 0 Query: 61 DKVVFITGCDSGFGKALAIHLAQKGFKVYAACLTAKGAENMTTECA-AVQTVLLDVTKADQVQSAADRVDSENP--QGLYVLVNNAGIAKSGLIDWFSMSDFRVCMEVNYFGVIAVTKAFLPLVKRRKGRIVVVSSVAGVSCGYPLSTPYSASKHAVELFASALRQEMRPWGIKVSTINPGFHRTEMNMVA--VQGLEGCWAKVPPHIQAEYGSSYFEGCKEFVRKHTEEVVFDP--VNVVRALEHAVTCTRPRVQYRVGLDAKYGLVWTQIFPLRLGEKIIYALTTNK 343 DK V ITGCD GFGK AI L Q GF V A CLT + + + E + + T LDVTK DQVQ +V + P +GL+ +VNNAG+A GL+DW S+ F+ +VN +G+I VTK FLPL+K+ KGRIV V+S G +C P + YS SK A E F+ ALR+E+ +G+KVS + PGF +T M A W K+ Q EYG ++ E + + P V+ A+EHAVT TRP +Y +G DA +W P +G+ I+ L + Sbjct: 53 DKYVLITGCDRGFGKMAAIRLDQLGFHVIATCLTDESQKELKEEASNKLTTFKLDVTKCDQVQDVYHKVTALIPRDKGLWGVVNNAGVATVGLVDWVSLETFKRSADVNLWGMIDVTKTFLPLIKKTKGRIVNVTSXGGRAC-LPNAVAYSVSKFAAEAFSDALRREIADFGVKVSIVEPGFFQTPMVTKANLSNAWRDVWNKLDKEKQEEYGEEFYXIQVENMLVGMVDTCCSPSTYKVIDAIEHAVTSTRPNSRYVIGWDANLLWIWLSRLPASVGDFIVQMLANKR 340
BLAST of NO04G04230 vs. NCBI_GenBank
Match: XP_020917493.1 (17-beta-hydroxysteroid dehydrogenase type 6-like [Exaiptasia pallida]) HSP 1 Score: 204.5 bits (519), Expect = 5.600e-49 Identity = 120/289 (41.52%), Postives = 163/289 (56.40%), Query Frame = 0 Query: 61 DKVVFITGCDSGFGKALAIHLAQKGFKVYAACLTAKGAENMTTECA-AVQTVLLDVTKADQVQSAADRVDSENP--QGLYVLVNNAGIAKSGLIDWFSMSDFRVCMEVNYFGVIAVTKAFLPLVKRRKGRIVVVSSVAGVSCGYPLSTPYSASKHAVELFASALRQEMRPWGIKVSTINPGFHRTEMNMVA--VQGLEGCWAKVPPHIQAEYGSSYFEGCKEFVRKHTEEVVFDP--VNVVRALEHAVTCTRPRVQYRVGLDAKYGLVWTQIFPLRLGEKIIYALTTNK 343 DK V ITGCD GFGK AI L Q GF V A CLT + + + E + + T LDVTK DQVQ +V + P +GL+ +VNNAG+A GL+DW S+ F+ +VN +G+I VTK FLPL+K+ KGRIV V+S G +C P + YS SK A E F+ ALR+E+ +G+KVS + PGF +T M A W K+ Q EYG ++ E + + P V+ A+EHAVT TRP +Y +G DA +W P +G+ I+ L + Sbjct: 42 DKYVLITGCDRGFGKMAAIRLDQLGFHVIATCLTDESQKELKEEASNKLTTFKLDVTKCDQVQDVYHKVTALIPRDKGLWGVVNNAGVATVGLVDWVSLETFKRSADVNLWGMIDVTKTFLPLIKKTKGRIVNVTSXGGRAC-LPNAVAYSVSKFAAEAFSDALRREIADFGVKVSIVEPGFFQTPMVTKANLSNAWRDVWNKLDKEKQEEYGEEFYXIQVENMLVGMVDTCCSPSTYKVIDAIEHAVTSTRPNSRYVIGWDANLLWIWLSRLPASVGDFIVQMLANKR 329
BLAST of NO04G04230 vs. NCBI_GenBank
Match: XP_002605547.1 (retinol dehydrogenase, retinaldehyde reductase [Branchiostoma floridae] >EEN61557.1 retinol dehydrogenase, retinaldehyde reductase [Branchiostoma floridae]) HSP 1 Score: 203.4 bits (516), Expect = 1.200e-48 Identity = 120/308 (38.96%), Postives = 180/308 (58.44%), Query Frame = 0 Query: 31 LLGPILAFLIVCYDVVSGFFFPVWHIAPSLDKVVFITGCDSGFGKALAIHLAQKGFKVYAACLTAKGAENMTTECA-AVQTVLLDVTKADQVQSAADRV-DSENPQGLYVLVNNAGIA--KSGLIDWFSMSDFRVCMEVNYFGVIAVTKAFLPLVKRRKGRIVVVSSVAGVSCGYPLSTPYSASKHAVELFASALRQEMRPWGIKVSTINPGFHRTEMNMV--AVQGLEGCWAKVPPHIQAEYGSSYFEGCKEFVRKHTEEVVFDPVNVVRALEHAVTCTRPRVQYRVGLDAKYGLVWTQIFPLRLGE 333 +L +++ L V Y VV+ ++ ++ DK V ITGCD+GFG L+ L Q G +V+A CLT G + C+ +Q + +DV+ +D VQ A V ++ +GL+ LVNNAGIA G ++W + D++ + VN G+I VTK FLPL+K+ +GR+V V+S G P + PY+ SK+ VE F+ LR+ MR +G+KV I PGFHRTE+ A++ L+ W + P + EYG + + K+ V + + DPV VV A+EHA+ TRPR +Y +G DA+ V P LG+ Sbjct: 5 MLLEVISVLWVTYSVVT-WWLERGRLSQLTDKTVLITGCDTGFGNLLSKRLDQLGLRVFAGCLTEAGVAELRQSCSERLQPIRMDVSSSDSVQDAFRVVKEAVGSKGLWGLVNNAGIAGVAGGPMEWATKEDYQAVLNVNLLGMIDVTKTFLPLLKKSRGRVVNVASAVG-RMAVPHAGPYTVSKYGVEAFSDCLRRAMRYFGVKVHIIEPGFHRTEITNQENALRLLDHTWQRQSPETKTEYGEEFLQAAKDAV-VAADRFMQDPVAVVDAMEHALCATRPRSRYVIGWDARIMFVPISWLPTDLGD 309
BLAST of NO04G04230 vs. NCBI_GenBank
Match: XP_015214471.1 (PREDICTED: retinol dehydrogenase 3-like isoform X2 [Lepisosteus oculatus] >XP_015214472.1 PREDICTED: retinol dehydrogenase 3-like isoform X2 [Lepisosteus oculatus]) HSP 1 Score: 203.0 bits (515), Expect = 1.600e-48 Identity = 111/264 (42.05%), Postives = 165/264 (62.50%), Query Frame = 0 Query: 61 DKVVFITGCDSGFGKALAIHLAQKGFKVYAACLTAKGAENMTTECA-AVQTVLLDVTKADQVQSAADRV-DSENPQGLYVLVNNAGIA-KSGLIDWFSMSDFRVCMEVNYFGVIAVTKAFLPLVKRRKGRIVVVSSVAGVSCGYPLSTPYSASKHAVELFASALRQEMRPWGIKVSTINPGFHRTEMNMVAV--QGLEGCWAKVPPHIQAEYGSSYFEGCKEFVRKHTEEVV-FDPVNVVRALEHAVTCTRPRVQYRVGLDAKY 319 DK V+ITGCD+GFG LA HL Q+GF+V AAC T KG + + + T+ LDVTK++ + AA+ + D +GL+ LVNNAG++ SG DW ++ D+R ++VN GVIAVT + LPL+K+ +GR+V V+SV G P PYS SK+ VE F +LR+ M P+G+KV I PGF +T + + + + ++ W K+P ++ +YGSSY + ++K ++ D + VV +EHAV+ PR +Y G DAK+ Sbjct: 29 DKYVYITGCDTGFGNQLAKHLDQQGFRVIAACFTEKGEDALRKGATDRLVTLHLDVTKSESIAKAAELIKDRVGEKGLWGLVNNAGVSVPSGPCDWLTVDDYRQMLDVNLLGVIAVTLSVLPLIKKARGRVVNVASVFGRIS--PFGGPYSVSKYGVEAFNDSLRRNMMPFGVKVLCIEPGFFKTSVTDIDILLKNVQQLWDKMPQEVKDDYGSSYVQKVSVLMKKMMGQLPDSDLMKVVSCMEHAVSAVHPRTRYSPGWDAKF 290
BLAST of NO04G04230 vs. NCBI_GenBank
Match: XP_006636595.2 (PREDICTED: retinol dehydrogenase 3-like isoform X1 [Lepisosteus oculatus]) HSP 1 Score: 203.0 bits (515), Expect = 1.600e-48 Identity = 111/264 (42.05%), Postives = 165/264 (62.50%), Query Frame = 0 Query: 61 DKVVFITGCDSGFGKALAIHLAQKGFKVYAACLTAKGAENMTTECA-AVQTVLLDVTKADQVQSAADRV-DSENPQGLYVLVNNAGIA-KSGLIDWFSMSDFRVCMEVNYFGVIAVTKAFLPLVKRRKGRIVVVSSVAGVSCGYPLSTPYSASKHAVELFASALRQEMRPWGIKVSTINPGFHRTEMNMVAV--QGLEGCWAKVPPHIQAEYGSSYFEGCKEFVRKHTEEVV-FDPVNVVRALEHAVTCTRPRVQYRVGLDAKY 319 DK V+ITGCD+GFG LA HL Q+GF+V AAC T KG + + + T+ LDVTK++ + AA+ + D +GL+ LVNNAG++ SG DW ++ D+R ++VN GVIAVT + LPL+K+ +GR+V V+SV G P PYS SK+ VE F +LR+ M P+G+KV I PGF +T + + + + ++ W K+P ++ +YGSSY + ++K ++ D + VV +EHAV+ PR +Y G DAK+ Sbjct: 32 DKYVYITGCDTGFGNQLAKHLDQQGFRVIAACFTEKGEDALRKGATDRLVTLHLDVTKSESIAKAAELIKDRVGEKGLWGLVNNAGVSVPSGPCDWLTVDDYRQMLDVNLLGVIAVTLSVLPLIKKARGRVVNVASVFGRIS--PFGGPYSVSKYGVEAFNDSLRRNMMPFGVKVLCIEPGFFKTSVTDIDILLKNVQQLWDKMPQEVKDDYGSSYVQKVSVLMKKMMGQLPDSDLMKVVSCMEHAVSAVHPRTRYSPGWDAKF 293 The following BLAST results are available for this feature:
BLAST of NO04G04230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G04230 ID=NO04G04230|Name=NO04G04230|organism=Nannochloropsis oceanica|type=gene|length=1110bpback to top protein sequence of NO04G04230.1 >NO04G04230.1-protein ID=NO04G04230.1-protein|Name=NO04G04230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=370bpback to top Synonyms
Publications
|