NO04G04040, NO04G04040 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G04040 vs. NCBI_GenBank
Match: EWM28670.1 (hypothetical protein Naga_100002g134 [Nannochloropsis gaditana]) HSP 1 Score: 98.6 bits (244), Expect = 2.000e-17 Identity = 44/61 (72.13%), Postives = 51/61 (83.61%), Query Frame = 0 Query: 40 LGAMAIFQKALIFRGNWNKETFPEFLDVIYWLRQMLALIIGLVWGRAPSLGGPAIMSFVGL 101 L A +F+KALIF+G WNKETFP+FLDVIYW RQ+LAL+IG+VWGRA S GG AIMSF L Sbjct: 33 LDAWGVFKKALIFQGQWNKETFPQFLDVIYWFRQVLALVIGVVWGRAASRGGTAIMSFAAL 93
BLAST of NO04G04040 vs. NCBI_GenBank
Match: XP_004210280.1 (PREDICTED: uncharacterized protein C20orf24 homolog [Hydra vulgaris]) HSP 1 Score: 89.4 bits (220), Expect = 1.200e-14 Identity = 42/109 (38.53%), Postives = 66/109 (60.55%), Query Frame = 0 Query: 43 MAIFQKALIFRGNWNKETFPEFLDVIYWLRQMLALIIGLVWGRAPSLGGPAIMSFVGLELMLPRMYYQKWASVDEDDFDAV-ALLKEGLQSAAGVFFATWVLTYTICHN 151 +++F+K+L F W ++ + LDVIYW+RQ+ AL+ G++WG P G I F+ + + +Y K+ VDEDD+ + LLKEGL +A VF W++ YT H+ Sbjct: 19 VSVFKKSLSFNAVWQEK--DDLLDVIYWMRQLFALLNGIIWGIIPFQGIIGIAGFLAINCAIVYIYVSKFQKVDEDDYGGIQELLKEGLFNAFAVFLVCWIMAYTGIHS 125
BLAST of NO04G04040 vs. NCBI_GenBank
Match: OAO15996.1 (hypothetical protein AV274_2312 [Blastocystis sp. ATCC 50177/Nand II] >OAO16711.1 hypothetical protein AV274_1552 [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 87.0 bits (214), Expect = 6.000e-14 Identity = 36/94 (38.30%), Postives = 60/94 (63.83%), Query Frame = 0 Query: 56 WNKETFPEFLDVIYWLRQMLALIIGLVWGRAPSLGGPAIMSFVGLELMLPRMYYQKWASVDEDDFDAVALLKEGLQSAAGVFFATWVLTYTICH 150 ++KETFP+FLD+IY+++Q +AL+IG+VWG P G +++ V +P +Y ++ V+ +DFD + +L EG +F +W+L YT H Sbjct: 34 YDKETFPDFLDLIYFVKQFVALVIGIVWGILPFTGAFGLLTGVVASFGIPLLYANRYLRVNTEDFDVMTILSEGAMPTFALFLLSWILCYTTFH 127
BLAST of NO04G04040 vs. NCBI_GenBank
Match: XP_012894798.1 (uncharacterized protein [Blastocystis hominis] >CBK20750.2 unnamed protein product [Blastocystis hominis]) HSP 1 Score: 85.5 bits (210), Expect = 1.800e-13 Identity = 35/101 (34.65%), Postives = 64/101 (63.37%), Query Frame = 0 Query: 49 ALIFRGNWNKETFPEFLDVIYWLRQMLALIIGLVWGRAPSLGGPAIMSFVGLELMLPRMYYQKWASVDEDDFDAVALLKEGLQSAAGVFFATWVLTYTICH 150 AL ++K++FP+FLD+IY+++Q+LAL+ G+VWG P G +++ + + LP +Y ++ V+ DDFD + +L+EG ++ W++TY+ H Sbjct: 27 ALKKEAEYDKDSFPDFLDIIYFMKQILALVFGIVWGIVPFTGAFGLVTGLVWVIGLPLVYATRYIRVNTDDFDVMTILQEGAMQGVCLYLVAWIVTYSAFH 127
BLAST of NO04G04040 vs. NCBI_GenBank
Match: XP_013065026.1 (PREDICTED: uncharacterized protein C20orf24 homolog [Biomphalaria glabrata]) HSP 1 Score: 84.7 bits (208), Expect = 3.000e-13 Identity = 39/108 (36.11%), Postives = 65/108 (60.19%), Query Frame = 0 Query: 44 AIFQKALIFRGNWNKETFPEFLDVIYWLRQMLALIIGLVWGRAPSLGGPAIMSFVGLELMLPRMYYQKWASVDEDDFDAVA-LLKEGLQSAAGVFFATWVLTYTICHN 151 ++F KALI W + EFLDVIYW+RQ+L L++G+VWG P G + F+ + + + +YY + VDE+++ + +LKEGL ++ F W++ Y+ H+ Sbjct: 19 SLFSKALIPEYKWQDK--DEFLDVIYWMRQILGLLLGIVWGIIPMKGFIGLALFLLVNVAIVYIYYNSFQKVDEEEYGGTSEILKEGLMTSFSSFLVAWIILYSALHS 124
BLAST of NO04G04040 vs. NCBI_GenBank
Match: XP_022338192.1 (uncharacterized protein C20orf24 homolog isoform X2 [Crassostrea virginica]) HSP 1 Score: 84.7 bits (208), Expect = 3.000e-13 Identity = 38/104 (36.54%), Postives = 62/104 (59.62%), Query Frame = 0 Query: 54 GNWNKETF----PEFLDVIYWLRQMLALIIGLVWGRAPSLGGPAIMSFVGLELMLPRMYYQKWASVDEDDF-DAVALLKEGLQSAAGVFFATWVLTYTICHNAS 153 GNW+ ++F EFLDVIYW+RQ+ L+ GL+WG P G ++ F L + +YY + +D++++ A +LKEGL ++ F TW++ Y+ H +S Sbjct: 3 GNWDTDSFCELRDEFLDVIYWMRQVFGLVQGLIWGLLPLKGFFGLLLFFVFNLGIIYLYYNSFQKIDDEEYGGASEILKEGLMTSFAAFLVTWIIIYSSLHTSS 106
BLAST of NO04G04040 vs. NCBI_GenBank
Match: CAX73767.1 (hypotheticial protein [Schistosoma japonicum]) HSP 1 Score: 81.6 bits (200), Expect = 2.500e-12 Identity = 44/114 (38.60%), Postives = 62/114 (54.39%), Query Frame = 0 Query: 40 LGAMAIFQKALIFRGNWNKETFPEFLDVIYWLRQMLALIIGLVWGRAPSLGGPAIMSFVGLELMLPRMYYQKWASVDEDDFDAVA-LLKEGLQSAAGVFFATWVLTYTICHNAS 153 L + IF KAL +N + +FLD+IYW RQ+ A+IIG+VWG A G AI+ F + Y + VDED++ ++KEGL +A F +W+LTY H S Sbjct: 12 LSSYDIFLKALKTESVFNDKN--DFLDIIYWFRQVFAIIIGVVWGLASFTGFLAIVMFFVTNICFVYAYAAMYQRVDEDEYGGYGEIVKEGLMTAFACFMVSWILTYDCAHGIS 123
BLAST of NO04G04040 vs. NCBI_GenBank
Match: AAX27655.2 (SJCHGC09444 protein, partial [Schistosoma japonicum]) HSP 1 Score: 81.6 bits (200), Expect = 2.500e-12 Identity = 44/114 (38.60%), Postives = 62/114 (54.39%), Query Frame = 0 Query: 40 LGAMAIFQKALIFRGNWNKETFPEFLDVIYWLRQMLALIIGLVWGRAPSLGGPAIMSFVGLELMLPRMYYQKWASVDEDDFDAVA-LLKEGLQSAAGVFFATWVLTYTICHNAS 153 L + IF KAL +N + +FLD+IYW RQ+ A+IIG+VWG A G AI+ F + Y + VDED++ ++KEGL +A F +W+LTY H S Sbjct: 12 LSSYDIFLKALKTESVFNDKN--DFLDIIYWFRQVFAIIIGVVWGLASFTGFLAIVMFFVTNICFVYAYAAMYQRVDEDEYGGYGEIVKEGLMTAFACFMVSWILTYDCAHGIS 123
BLAST of NO04G04040 vs. NCBI_GenBank
Match: XP_021364439.1 (uncharacterized protein C20orf24 homolog [Mizuhopecten yessoensis]) HSP 1 Score: 81.6 bits (200), Expect = 2.500e-12 Identity = 37/105 (35.24%), Postives = 63/105 (60.00%), Query Frame = 0 Query: 43 MAIFQKALIFRGNWNKETFPEFLDVIYWLRQMLALIIGLVWGRAPSLGGPAIMSFVGLELMLPRMYYQKWASVDEDDFDA-VALLKEGLQSAAGVFFATWVLTYT 147 MA F KA + W+ + EFLDVIYW+RQ++ +++GL+WG P G A++ F + + +YY + VD++++ +LKEGL ++ F TW++ Y+ Sbjct: 25 MATFSKAFVAEAAWDDK--DEFLDVIYWMRQIIGMVLGLIWGLFPLKGIIALVIFFAINCGVIYIYYGIFQKVDDEEYGGPTEILKEGLMTSFSTFVVTWIILYS 127
BLAST of NO04G04040 vs. NCBI_GenBank
Match: XP_011451238.1 (PREDICTED: uncharacterized protein C20orf24 homolog [Crassostrea gigas] >EKC36866.1 Uncharacterized protein C20orf24-like protein [Crassostrea gigas]) HSP 1 Score: 81.3 bits (199), Expect = 3.300e-12 Identity = 39/111 (35.14%), Postives = 61/111 (54.95%), Query Frame = 0 Query: 43 MAIFQKALIFRGNWNKETFPEFLDVIYWLRQMLALIIGLVWGRAPSLGGPAIMSFVGLELMLPRMYYQKWASVDEDDF-DAVALLKEGLQSAAGVFFATWVLTYTICHNAS 153 ++ KA W E EFLDVIYW+RQ+ L+ GL+WG P G ++ F L L + +YY + +D++++ A +LKEGL ++ F TW++ Y+ H S Sbjct: 21 ISTLSKAFASGSTW--EDKDEFLDVIYWMRQVFGLVQGLIWGLLPLKGFFGLLLFFALNLGIVYLYYNSFQKIDDEEYGGASEILKEGLMTSFAAFLVTWIIIYSSLHTNS 129 The following BLAST results are available for this feature:
BLAST of NO04G04040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G04040 ID=NO04G04040|Name=NO04G04040|organism=Nannochloropsis oceanica|type=gene|length=1413bpback to top protein sequence of NO04G04040.1 >NO04G04040.1-protein ID=NO04G04040.1-protein|Name=NO04G04040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=172bpback to top Synonyms
Publications
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