NO04G03850, NO04G03850 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G03850 vs. NCBI_GenBank
Match: EWM28829.1 (hypothetical protein Naga_100002g118 [Nannochloropsis gaditana]) HSP 1 Score: 551.2 bits (1419), Expect = 2.900e-153 Identity = 270/408 (66.18%), Postives = 316/408 (77.45%), Query Frame = 0 Query: 4 AGFVDMEAVLSVTRGEADVYVSQSFESRPVYDTGKKKVLNWTARSEKRGSDHVSLPRTLFPACHEDCYFVIGVLGKSVVPKARFSLVVRREDSIVALQDGVALRDEVADDEYVHFSVKVTDPDADLSIHLTPLSGDPDLFVDAFPNTRPTKGNHTWASQSFGSDTLTLQAADMKTHCMPNPAVGLICDYFVSVFGWENASFSILASLHRGWTEPTQLFPGLPQAGEVSQGEYAYYSFYVPPDTLSLRFVLTPQNLAGGGKGGGEDVDGWDSWSDAWEDLPDQDLFLTTSREKEPGEANFDLRSMTWAGVEEITYAKEEMVKGGGEEQAFCTDCTVYLAVYGYAGVGA-YTLRVETGVSTLQNAVPATGHLSGDGTAYYTIYSDDPKAHVLLSLVTLSGDADLYVLAAK 411 AG VDM+ VLSV RG+ADV+VSQ+FE RPVYD KV NWTA+S RGSD + +PRTLFP C +DCYFV+GV GKSVVP AR+SLV RR + IVALQDGVALRDEV + EY++FS K+TDP+AD+SIHLTP +GDPDLFV PN RP+ NHTWAS+S G DTLTLQ +DMKTHC P+P+ GL CDYF+SV+G+ENASFS+L SLH+GW EP +LFPGLPQAGEV++GEY YYSFYVPPDT+SL+FVLTPQ+L G K ++ D W FLTTSR++EPGE FDLRS +WAGVEEITY+ E+ EE FCT CTVYLAVYGYAG G YTLRVETG+ TLQNAVP TGHL G A+Y IYS D AH+L S VTLSGDADLY+LA + Sbjct: 1021 AGNVDMDVVLSVIRGQADVFVSQTFEGRPVYDAAHNKVRNWTAKSTSRGSDRLLVPRTLFPPCEKDCYFVLGVFGKSVVPPARYSLVARRAEGIVALQDGVALRDEVGEGEYLYFSFKLTDPEADVSIHLTPFNGDPDLFVAPAPNARPSATNHTWASRSLGPDTLTLQCSDMKTHCAPDPSRGLACDYFISVYGYENASFSLLVSLHQGWREPIELFPGLPQAGEVNEGEYVYYSFYVPPDTVSLQFVLTPQDLWGEDK---DEADDWXXXXXXXXXXXXXXXFLTTSRDREPGEDTFDLRSTSWAGVEEITYSAAEL----QEEGVFCTGCTVYLAVYGYAGQGGEYTLRVETGLVTLQNAVPVTGHLVKGGAAHYKIYSRDSNAHLLFSAVTLSGDADLYILAVE 1421
BLAST of NO04G03850 vs. NCBI_GenBank
Match: CBJ29308.1 (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 167.5 bits (423), Expect = 9.100e-38 Identity = 118/407 (28.99%), Postives = 188/407 (46.19%), Query Frame = 0 Query: 10 EAVLSVTRGEADVYVSQSFESRPVYDTGKKKVLNWTARSEKRGSDHVSLPRTLFPACHEDCYFVIGVLGKSVVPKARFSLVVRREDSIVALQDGVALRDEVADDEYVHFSVKVTDPDADLSIHLTPLSGDPDLFV---DAFPNTRPTKGNHTWASQSFGSDTLTLQAADMKTHCMPNPAVGLICDYFVSVFGWENASFSILASLHRGWTEPTQLFPG-LPQAGEVSQGEYAYYSFYVPPDTLSLRFVLTPQNLAGGGKGGGEDVDGWDS--WSDAWEDLPDQDLFLTTSREKEPGEANFDLRSMTWAGVEEITYAKEEMVKGGGEEQAFCTDCTVYLAVYGYAGVGAYTLRVETGVSTLQNAVPATGHLSG-DGTAYYTIYSDDPKAH---VLLSLVTLSGDADLYV 407 E ++++ G+ + Y S S G++ + S+ G + LP P HE V+ V A + ++ ++ ++ L+DG+ ++ E +FS+ V D DL I L P SGDPD++V D + P+K N TW + SFG DTL +QA + +C P IC Y + V N S++I ASL GW P QL G PQ+ + +G + YY+ + P + + W+S + D QDL+ T +R +EPG ++D++S W G + +++ FCTDCT+Y+ VYGY G Y++ G++ LQ P G + G D YY + +P H + + L+GD D+YV Sbjct: 93 EVIITLAYGDVETYASSS---------GREPT---PSESDWSGGRVLRLPGWSVP--HEGDTVVVMVKATGTA-GALYRVLAASDEDVLRLEDGMPVQMLQDASEMRYFSIAVADNATDLLISLDPQSGDPDMYVSPEDPDGLSLPSKQNFTWQALSFGKDTLHMQAESLSEYCTPGTEDNEICTYCIGVEARTNCSYTIKASLSSGWRHPQQLLLGNHPQSSFLEEGNFDYYALLITP---------------------APEENPWESIVVTTTPTDGGQQDLYATANRSREPGPEDYDVKSSNWVGSSTLVFSE--------TAPGFCTDCTIYVGVYGYK-KGGYSIVASQGLTRLQEGFPQQGLVGGEDDWKYYEFF--NPPGHGKSIQVVATALTGDPDIYV 452
BLAST of NO04G03850 vs. NCBI_GenBank
Match: OMJ88503.1 (hypothetical protein SteCoe_9537 [Stentor coeruleus]) HSP 1 Score: 77.4 bits (189), Expect = 1.200e-10 Identity = 83/349 (23.78%), Postives = 150/349 (42.98%), Query Frame = 0 Query: 69 DCYFVIGVLGKSVVPKARFSLVV--RREDSIVALQDGVALRDEVADDEYVHFSVKVTDPDADLSIHLTPLSGDPDLFVDAFP-NTRPTKGNHTWASQSFGSDTLTL---QAADMKTHCMP---NPAVGLICDYFVSVFGWENASFSILASLHRGWTEPTQLFPGLPQAGEVSQGEYAYYSFYVPPDT-LSLRFVLTPQNLAGGGKGGGEDVDGWDSWSDAWEDLPDQDLFLTTSREKEPGEANFDLRSMTWAGVEEITYAKEEMVKGGGEEQAFCTDCTVYLAVYGYAGVGAYTLRVETGVSTLQNAVPATGHLSGDGTAYYTIYSDDPKAHVLLSLVTL-SGDADLYV 407 D ++I V+G+S + + VV D+ + L + V + V +EY +++ + D++I +T L+GDPD+++ P N PT + + S +FGS+ +TL Q K MP N C+ ++ V G+E +++ I +H G P L G P V+ Y +Y Y DT + + L P + G SD + ++ D +++ + P D S + EEI + + + E C + +V+ Y+ V Y++ V + AT G YY+ Y D + L+++ + G+ D+Y+ Sbjct: 679 DSTYLILVMGESYLADNTSTYVVGFTCGDANMILNEDVPITGVVMQNEYNYYTFPIHYKHEDVTISITALTGDPDMYISVDPLNPNPTYLEYDFISTTFGSEYITLVWEQGLKDKCPDMPDDYNFGDKTECNVYIGVHGFETSTYII--RVHPGKNMPMVLTLGQPINSNVNISSYNFY--YTMVDTKIDVHVYLLP--MIGD--------------SDLFVNVIDSKKESDSTKWERPTREKSDYASQSSVMSEEIDISPKIL-----ENYCSSGTCIILSSVFCYSEVCTYSISVRQTEMQMLIENQATYGSVDIGYLYYSYYCDKESTNFLITVTSFGDGNPDMYI 1002
BLAST of NO04G03850 vs. NCBI_GenBank
Match: OMJ70119.1 (hypothetical protein SteCoe_31973 [Stentor coeruleus]) HSP 1 Score: 77.0 bits (188), Expect = 1.600e-10 Identity = 86/357 (24.09%), Postives = 154/357 (43.14%), Query Frame = 0 Query: 64 PACHEDCYFVIGVLGKSVVPKARFSLVVRRE--DSIVALQDGVALRDEVADDEYVHFSVKVTDPDADLSIHLTPLSGDPDLFVDAFP-NTRPTKGNHTWASQSFGSDTLTL-QAADMKTHCMPNP-----AVGLICDYFVSVFGWENASFSILASLHRGWTEPTQLFPGLPQAGEVSQGEYAYYSFYVPPDT-LSLRFVLTPQNLAGGGKGGGEDVDG-WDSWSDAWEDLPDQDLFLTTSREKEPGEANFDLRSMTWAGVEEITYAKEEMVKGGGEEQAFCTD--CTVYLAVYGYAGVGAYTLRVETGVSTLQNAVPATGHLSGDGTAYYTIYSDDPKAHVLLSLVTL-SGDADLYV 407 P+ D ++I V+G++ + + VV D+ + L + V + V ++EY +++ + D++I +T L+GDPD+++ P N PT + + S +FGS+ +TL +K C P C+ ++ V G+E +++ I +H P L G P + V+ Y +Y Y DT + L P + G +D +S S WE +REK + F + S EEI + E+ Q C C + +V+ Y+ V Y++ + + AT G AYY+ Y D + L+++ + G+ D+Y+ Sbjct: 674 PSYKLDSTYLILVMGENYLADNTSTYVVAFTCGDANMILSEDVPVTGVVIENEYNYYTFPIHYNHEDVTISITALTGDPDMYISVDPLNPNPTYREYDFVSTTFGSEYITLVWELGLKDKCPEVPDDYNFGDKTECNVYIGVHGYETSTYII--RVHPAKNLPMILSLGQPISSNVNISSYNFY--YTMVDTKIDTHVYLLP--MIGDSDLFVNVIDSKKESDSSKWE---------RPTREKNDYASQFSVMS------EEIDISSTEL-------QIVCPSGTCIILSSVFCYSEVCTYSISIRQNEVQMLIENQATYGSIDIGYAYYSYYCDKESTNFLITVTSFGDGNPDMYI 1002
BLAST of NO04G03850 vs. NCBI_GenBank
Match: CEM37644.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 72.8 bits (177), Expect = 3.100e-9 Identity = 72/268 (26.87%), Postives = 122/268 (45.52%), Query Frame = 0 Query: 87 FSLVVRREDSIVALQDGVALRDEVADDEYVHFSVKVTDPDADLSIHLTPLSGDPDLFVDAFPNTRPTKGNHTWASQSFGSDTLTLQAADMKTHCMPNPAV---GLICDYFVSVFGWENASFSILASLHRGWTEPTQLFPGLPQAGEVSQGEYAYYSFYVPPDTLSLRFVLTPQNLAGGGKGGGEDVDGWDSWSDAWEDLPDQDLFLTTSREKEPGEANFDLRSMTWAGVEEITYAKEEMVKGGGEEQAFC------TDCTVYLAVYGY 346 F+L+ + ++ L +GV L + ++E + F + D D L++ LT ++GD DL+V P R T ++S FGSD + + A D N V C Y+++V G+ + +F+I A+L G +PT+L P PQ G+ Q A ++ TLS N+ K G D+ S L D L + ++ + + L ++ G E +T + E++ E+A C DC + + VYG+ Sbjct: 860 FNLMGSSDSDVMLLAEGVPLFGTIEEEEVLFFRLASADIDHHLTVSLTIIAGDADLYVGFEPKLR-TGDPEVFSSDQFGSDVVFIPADDPAHRKYCNKDVIDKKGECVYYIAVLGYRDTAFTIEANLADG--KPTELEPFEPQEGKTLQSGSALFT-----ATLSKEAFEDEINVKVTPKTGDPDLYVMVVSSSV---LKDGTGGLGSLKDTDQATVHKSLHAL---GDEAVTLSTEQL--KADRERAQCGKGANTPDCMLLIQVYGF 1111
BLAST of NO04G03850 vs. NCBI_GenBank
Match: OMJ73394.1 (hypothetical protein SteCoe_27925 [Stentor coeruleus]) HSP 1 Score: 70.9 bits (172), Expect = 1.200e-8 Identity = 79/366 (21.58%), Postives = 145/366 (39.62%), Query Frame = 0 Query: 54 DHVSLPRTLFPACHEDCYFVIGVLGKSVVPKARFSLVVRREDSIVALQDGVALRDEVADDEYVHFSVKVTDPDADLSIHLTPL-SGDPDLFVDAFPNTRPTKGNHTWASQSFGSDTLTLQAADMKTHCMPNPAVGLICDYFVSVFGWENASFSILASLHRGWTEPTQLFPGLPQAGEVSQGEYAYYSFYVPPDTLSLRFVLTPQNLAGGGKGGGEDVDGWDSWSDAWED-------LPDQDLFLTTSREKEPGEANFDLRSMT---WAGVEEITYAKEEMVKGGGEEQAFCTDCTVYLAVYGYAGVGAYTLRVETG--VSTLQNAVPATGHLSGDGTAYYTIYSDDPKAHVLLSLVTLSGDADLYV 407 + + L F C DCY VL + + + +DS + L + ++ + + +F + + D++L I LT + + +PDL+V NT PTK + W S++FG +TL++ + Y++ +F + F+I+ S QL+PGLPQ E+ + + F WS + ED L Q + + + E E + + T WA + + +E ++ ++ FC +C + ++V Y Y + V + L N VP G + + Y +++ D + + L + GDAD+YV Sbjct: 91 ESIHLTTKSFEKCKGDCYIKASVL---CLSSSCSFYIYYDQDSYIILSENRPIQSHTEKETFTYFRFYLAE-DSNLFILLTVIGNSNPDLYVS--KNTLPTKQSADWKSETFGGETLSIYQTESGV-------------YYIGIFCQTKSEFTIMISTE--IYSFLQLYPGLPQYMEIPEKNRNLFVF----------------------------------WSSSKEDIEIKISLLKGQVVLMANPQHPEIEEMAEKIPTPTDRAWASLTKDN--EENIIVIKASDKNFCNNCNIIISVAAYYD-SEYIITVNNAQYLEVLLNGVPVQGVVEKNTINSY-MFTLDTASDIEFRLASYVGDADIYV 397
BLAST of NO04G03850 vs. NCBI_GenBank
Match: XP_002675208.1 (predicted protein [Naegleria gruberi] >EFC42464.1 predicted protein [Naegleria gruberi]) HSP 1 Score: 69.7 bits (169), Expect = 2.600e-8 Identity = 83/337 (24.63%), Postives = 131/337 (38.87%), Query Frame = 0 Query: 72 FVIGVLGKSVVPKARFSLVVRREDSIVALQDGVALRDEVADDEYVHFSVKVTDPDA-DLSIHLTPLSGDPDLFVDAFPNTRPTKGNHTWASQSFGSDTLTLQAADMKTHCMPNPAVGLICDYFVSVFGWENASFSILASLHRGWTEPTQLFPGLPQAGEVSQGEYAYYSFYVPPDTLSLRFVLTPQNLAGGGKGGGEDVDGWDSWSDAWEDLPDQDLFLTTSREKEPGEANFDLRSMTWAGVEEITYAKEEMVKGGGEEQAFCTDCTVYLAVYGYAGVGAYTLRV--ETGVSTLQNAVPATGHLSGDGTAYYTIYSDDPKAHVLLSLVTLSGDADLY 406 F IGV G SV A F V + V L DG + + Y +F +++ A +LSI +TP+ GDPD+FV + PT N+ W+S+S+G D + +Q NP GL+ Y++ V+ + + F+I+A +E P G++ + + Y Y L L P G D DL++ + ++ RSM G + K G Y+ V+GYA Y + V E + + V G L + YY D ++ V +++ SG LY Sbjct: 126 FYIGVHGFSV---AEFVFNVWSSNKFVHLTDGTPQQAKALRGTYTYFRLELPHLLATNLSISVTPIDGDPDIFVSS-QTQYPTSNNYEWSSRSYGFDIVNIQ-----HDTQMNP--GLV--YWIGVYAYNDVHFTIVAR----QSETAVRLPEGHAVGDLIEADQMEYYVYNNLQFQRLLISLIPLTSRG-----------------------DPDLYIKFGSVPTLTDYDYSQRSM---GNDAFEIEKASSQLG-----------YYYIGVHGYARDTKYRILVTTEEANTVCADGVSYAGRLLTNELNYYKFSHADTESRVTVTVKVYSGAVTLY 408
BLAST of NO04G03850 vs. NCBI_GenBank
Match: XP_002738371.1 (PREDICTED: uncharacterized protein LOC100372233 [Saccoglossus kowalevskii]) HSP 1 Score: 69.7 bits (169), Expect = 2.600e-8 Identity = 43/150 (28.67%), Postives = 73/150 (48.67%), Query Frame = 0 Query: 109 EVADDEYVHFSVKVTDPDADLSIHLTPLSGDPDLFVDAFPNTRPTKGNHTWASQSFGSDTLTLQAADMKTHCMPNPAVGLICDYFVSVF---------GWENASFSILASLHRGWTEPTQLFPGLPQAGEVSQGEYAYYSFYVPPDTLSL 250 EV D + +F+V+VT+P DL + + G+PDL+V FP PT+ + W+S +G + LT+ + D P +G +++ V G EN+ F +L T G+ G ++ EY+YY F +P D +++ Sbjct: 37 EVQCDSFKYFTVEVTEPCMDLRVQVIRSQGEPDLYVSRFPVLYPTEKSLAWSSYDWGHENLTISSWD------PEFEIG---TFYIGVHAFCSDQVHSGDENSIFILLVESIPSTHPETPDMMGMTIQGTLTPQEYSYYRFCIPRDCVTV 177
BLAST of NO04G03850 vs. NCBI_GenBank
Match: XP_002673162.1 (predicted protein [Naegleria gruberi] >EFC40418.1 predicted protein [Naegleria gruberi]) HSP 1 Score: 69.3 bits (168), Expect = 3.400e-8 Identity = 50/175 (28.57%), Postives = 84/175 (48.00%), Query Frame = 0 Query: 85 ARFSLVVRREDSIVALQDGVALRDEVADDEYVHFSVKVTDPDADLSIHLTPLSGDPDLFVDAFPNTRPTKGNHTWASQSFGSDTLTLQAADMKTHCMPNPAVGLICDYFVSVFGWENASFSILASLHRGWTEPTQLFPGLPQAG----EVSQGEYAYYSFYVPPDTLSLRFVLTP 256 + +++VV + + L D V V +Y F + ++D D+S L+ +SGD D+++ N + N+ W + S+ + L AA+ P L +V+V+G+ +SFSI+A LH G +P +L G+P G ++S Y YY T LR V+ P Sbjct: 464 SNYTIVVSSANRFIELVDTVQYSYTVNKRDYRKFVLPISDNSVDVSFSLSTISGDADMYIST--NQLVDRANYKWKAASYARNELIHIAANDPLRHSPEFDGSL----YVAVYGYAASSFSIVAYLHTG--QPIELESGVPVYGVLENDMSSQNYKYYL----STTRDLRIVVQP 626
BLAST of NO04G03850 vs. NCBI_GenBank
Match: PIK36137.1 (hypothetical protein BSL78_27033 [Apostichopus japonicus]) HSP 1 Score: 66.6 bits (161), Expect = 2.200e-7 Identity = 55/218 (25.23%), Postives = 96/218 (44.04%), Query Frame = 0 Query: 48 SEKRGSDHVSLPRTLFPACHEDCYFVIGVLGKSVVPKARFSLVVRREDSIVALQD---------GVALRDEVAD-DEYVHFSVKVTDPDADLSIHLTPLSGDPDLFVDAFPNTRPTKGNHTWASQSFGSDTLTLQAADMK-THCMPNPAVGLICDYFVSVFGWENASFSILASLHRGWTEPTQLFPGLPQAGEVSQGEYAYYSFYVPPDTLSLRFVLT 255 + K+ S H++L + Y V + K + P F LV S V L + G L +++A +EY ++ + V++P DL I + + G+P+L++ PN PT + W+S +GS+ L + + D + T V C V G+ +A FS+ + +++ G +S Y YY F VP ++ +LT Sbjct: 3 ASKKSSLHITL----------EVYMVFKMETKRLAPILSFVLVAALVPSCVRLTEAQQHNELTFGQRLVNQIAKCNEYAYYKIDVSEPCQDLRIQVDVIEGEPNLYMCKSPNLYPTYSSLAWSSYDWGSEDLVISSWDPEFTTGTFYIGVHAYCGDDVDT-GYTDARFSVYVTTVTSVHPHSEISLNGTLPGTLSVNGYDYYRFCVPSSCSNIEVLLT 209 The following BLAST results are available for this feature:
BLAST of NO04G03850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 11
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G03850 ID=NO04G03850|Name=NO04G03850|organism=Nannochloropsis oceanica|type=gene|length=1341bpback to top protein sequence of NO04G03850.1 >NO04G03850.1-protein ID=NO04G03850.1-protein|Name=NO04G03850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=447bpback to top Synonyms
Publications
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